Psyllid ID: psy16343

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------54
Protein Sequence
MDFYGDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSESLLVQRRQRLQSQSQSDNLASAGQCGNSASGSSVVNVQSLLAKLVTPL
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEEEccccccccccEEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHcccccccccccccccHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccHHHHHEHccEEEEEcccEEEEEEEEccccEEEEEEEEEccccccccHHHHHHHHHHHHcccccEEEEEEEcccHHHHHccccEEcccccHHHEEEEcccccccEEEEEccccEEEccccccccccEccEEccccccHHHccHHHHHHHHccccccEccHHHHHHHHHHHHHHHHccccccHHHHHccHHHHHHHHHHHHHccHHHHHcccEcccccccHEEEEcccccccEEEEEccccEEEcccccccccccccccccccccHHHccHHHHHHHHccccccEccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHccHHHHHccccEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccHHHHHHHHcccc
Coil and Loop (DISEMBL)
mdfygdsfhhsvpvatsksNAERIEEARNKRRRKKTATSLVTSCFQDLYRlkgeilgkgayaSVQTCVNILTELEYAVKIIdklpghsrsrvfkevetfhhcqghpnIIQLLEyyeddenherhkriahrdlkpenilcvhpdqlspvklcdfdlgsgikfntsvhsplatpllltpvgsaefmapeivnafmgpeasgydkrcdlwSLGVVVYILLcgyppfygncgedcgwqrgetcHACQEILFHSIQqgiahrdlkpenilcvhpdqlspvklcdfdlgsgikfntsvhsplatpllltpvgsaefmapeivnafmgpeasgydkrcdlwSLGVVVYILLcgyppfygncgedcgwqrgetcHACQEILFHSiqqghydfpegewstiSDEAKDLIRRLLVKDARKRLSAASvlkhpwistagtahrplvtpqviRRNQSARELSSFAESAMSANRVILQHFSicknpkdeqwlatptnmrlsppsesLLVQRRQRLQSqsqsdnlasagqcgnsasgssVVNVQSLLAKLVTPL
Flexible Loop (DISEMBL)
mdfygdsfhhsvpvatsksnaerIEEArnkrrrkktatslvtscfqdLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSaasvlkhpwistagtahrplvtpqVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSESLLVQRRQRLQSQSQSDNLASAGqcgnsasgssvvNVQSLLAKLVTPL
Low Complexity Region (SEG)
MDFYGDSFHHSVPVATSKSnaerieearnkrrrkktatSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPsesllvqrrqrlqsqsqsDNLASAGQCgnsasgssvvnvqsLLAKLVTPL
Disordered region (IsUnstruct)
**************************************SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE*****KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVI*******************NRVILQHFSICKN*****W**************************************************************
Disordered Region (DISOPRED)
********************************************FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG**RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT**********I***QS*RELSSFAESAMSANRV***************************************************************VVNVQSLLAKLVTPL
Disordered Region (DISEMBL)
********HHSVPVAT***********************LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPS**********************************VVNVQSLLAKLVTPL
Disordered Region (DISPRO)
****************************************VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSESLLVQRRQRLQSQSQSDNLASAGQCGNSASGSSVVNVQSLLAKLVTPL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDFYGDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSESLLVQRRQRLQSQSQSDNLASAGQCGNSASGSSVVNVQSLLAKLVTPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	539	2.2.26 [Sep-21-2011]
Q5U2N4	459	MAP kinase-interacting se	yes	N/A	0.456	0.535	0.606	1e-81
Q8CDB0	459	MAP kinase-interacting se	no	N/A	0.456	0.535	0.606	1e-81
Q66JF3	417	MAP kinase-interacting se	yes	N/A	0.473	0.611	0.567	1e-81
Q9HBH9	465	MAP kinase-interacting se	yes	N/A	0.450	0.522	0.589	5e-81
Q6P431	467	MAP kinase-interacting se	N/A	N/A	0.471	0.543	0.572	1e-80
O08605	427	MAP kinase-interacting se	no	N/A	0.471	0.594	0.564	1e-79
Q66I46	466	MAP kinase-interacting se	no	N/A	0.467	0.540	0.573	2e-79
Q58D94	420	MAP kinase-interacting se	no	N/A	0.471	0.604	0.551	4e-79
Q4G050	413	MAP kinase-interacting se	no	N/A	0.476	0.622	0.555	1e-78
Q9BUB5	465	MAP kinase-interacting se	no	N/A	0.469	0.544	0.554	9e-78

>sp|Q5U2N4|MKNK2_RAT MAP kinase-interacting serine/threonine-protein kinase 2 OS=Rattus norvegicus GN=Mknk2 PE=2 SV=1

 Score =  304 bits (779), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 186/249 (74%), Gaps = 3/249 (1%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G+CG DCGW RGE C ACQ 
Sbjct: 258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGHCGSDCGWDRGEACPACQN 316

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +LF SIQ+G Y+FP+ +WS IS  AKDLI +LLV+DA++RLSAA VL+HPW+      + 
Sbjct: 317 MLFESIQEGKYEFPDKDWSHISFAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 376

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSE 491
            L TP V++RN  A++L+SFA  A++ NR + Q        +     AT   ++LSPPS+
Sbjct: 377 -LPTPLVLQRNSCAKDLTSFAAEAIAMNRQLAQCEEDAGQDQPVLIRATSRCLQLSPPSQ 435

Query: 492 SLLVQRRQR 500
           S L QRRQR
Sbjct: 436 SKLAQRRQR 444

Serine/threonine-protein kinase that phosphorylates SFPQ/PSF, HNRNPA1 and EIF4E. May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap. Required for mediating PP2A-inhibition-induced EIF4E phosphorylation. Triggers EIF4E shuttling from cytoplasm to nucleus. Enhances the formation of EIF4F complex in pachytene spermatocytes, thus promoting mRNA translation during spermatogenesis. Displays a high basal kinase activity. Acts as a mediator of the suppressive effects of IFNgamma on hematopoiesis. Negative regulator for signals that control generation of arsenic trioxide As(2)O(3)-dependent apoptosis and anti-leukemic responses. Involved in anti-apoptotic signaling in response to serum withdrawal.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8CDB0|MKNK2_MOUSE MAP kinase-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Mknk2 PE=1 SV=3

 Score =  304 bits (779), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 186/249 (74%), Gaps = 3/249 (1%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G+CG DCGW RGE C ACQ 
Sbjct: 258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGHCGSDCGWDRGEACPACQN 316

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +LF SIQ+G Y+FP+ +WS IS  AKDLI +LLV+DA++RLSAA VL+HPW+      + 
Sbjct: 317 MLFESIQEGKYEFPDKDWSHISFAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 376

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSE 491
            L TP V++RN  A++L+SFA  A++ NR + Q        +     AT   ++LSPPS+
Sbjct: 377 -LPTPLVLQRNSCAKDLTSFAAEAIAMNRQLAQCEEDAGQDQPVVIRATSRCLQLSPPSQ 435

Query: 492 SLLVQRRQR 500
           S L QRRQR
Sbjct: 436 SKLAQRRQR 444

Serine/threonine-protein kinase that phosphorylates SFPQ/PSF, HNRNPA1 and EIF4E. May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap. Required for mediating PP2A-inhibition-induced EIF4E phosphorylation. Triggers EIF4E shuttling from cytoplasm to nucleus. Enhances the formation of EIF4F complex in pachytene spermatocytes, thus promoting mRNA translation during spermatogenesis. Displays a high basal kinase activity. Acts as a mediator of the suppressive effects of IFNgamma on hematopoiesis. Negative regulator for signals that control generation of arsenic trioxide As(2)O(3)-dependent apoptosis and anti-leukemic responses. Involved in anti-apoptotic signaling in response to serum withdrawal.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q66JF3|MKNK1_XENTR MAP kinase-interacting serine/threonine-protein kinase 1 OS=Xenopus tropicalis GN=mknk1 PE=2 SV=1

 Score =  304 bits (778), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/259 (56%), Positives = 190/259 (73%), Gaps = 4/259 (1%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC   D++SPVK+CDFDLGSG+K N++  +P+ TP L TP GSAE+M
Sbjct: 152 KGIAHRDLKPENILCEFKDKVSPVKICDFDLGSGVKLNSAC-TPITTPELTTPCGSAEYM 210

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V  F   EA+ YDKRCDLWSLGV++YI+L GYPPF GNCG DCGW RGE C  CQ 
Sbjct: 211 APEVVEVFT-EEATFYDKRCDLWSLGVILYIMLSGYPPFVGNCGADCGWDRGEMCRVCQN 269

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
            LF SIQ+G Y+FPE +WS IS+ AKDLI +LLV+DA++RLSAA VL+HPW+       R
Sbjct: 270 KLFESIQEGKYEFPEKDWSHISNSAKDLISKLLVRDAKERLSAAQVLQHPWLQ-GDAPER 328

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSE 491
            L TP V++RN S ++L+ FA  A++ NR + QH S   N + E ++ T  +MRLSPPS+
Sbjct: 329 GLPTPLVLQRNSSTKDLTIFAAEAVALNRQLSQHDSDL-NEEHESFIHTVCSMRLSPPSK 387

Query: 492 SLLVQRRQRLQSQSQSDNL 510
           S L +RR +  ++    +L
Sbjct: 388 SRLAKRRAQAHARKGGSHL 406

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9HBH9|MKNK2_HUMAN MAP kinase-interacting serine/threonine-protein kinase 2 OS=Homo sapiens GN=MKNK2 PE=1 SV=3

 Score =  302 bits (773), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 152/258 (58%), Positives = 190/258 (73%), Gaps = 15/258 (5%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ 
Sbjct: 258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 316

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +LF SIQ+G Y+FP+ +W+ IS  AKDLI +LLV+DA++RLSAA VL+HPW+      + 
Sbjct: 317 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 376

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWL---------ATPT 482
            L TP V++RN  A++L+SFA  A++ NR + QH    ++  +E+           AT  
Sbjct: 377 -LPTPMVLQRNSCAKDLTSFAAEAIAMNRQLAQHD---EDLAEEEAAGQGQPVLVRATSR 432

Query: 483 NMRLSPPSESLLVQRRQR 500
            ++LSPPS+S L QRRQR
Sbjct: 433 CLQLSPPSQSKLAQRRQR 450

Serine/threonine-protein kinase that phosphorylates SFPQ/PSF, HNRNPA1 and EIF4E. May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap. Required for mediating PP2A-inhibition-induced EIF4E phosphorylation. Triggers EIF4E shuttling from cytoplasm to nucleus. Isoform 1 displays a high basal kinase activity, but isoform 2 exhibits a very low kinase activity. Acts as a mediator of the suppressive effects of IFNgamma on hematopoiesis. Negative regulator for signals that control generation of arsenic trioxide As(2)O(3)-dependent apoptosis and anti-leukemic responses. Involved in anti-apoptotic signaling in response to serum withdrawal.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6P431|MKNK2_XENLA MAP kinase-interacting serine/threonine-protein kinase 2 OS=Xenopus laevis GN=mknk2 PE=2 SV=1

 Score =  301 bits (770), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/262 (57%), Positives = 193/262 (73%), Gaps = 8/262 (3%)

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E L +   +GIAHRDLKPENILC  P Q+SPVK+CDFDLGSGIK N+   SP++TP LLT
Sbjct: 190 EALNYLHNKGIAHRDLKPENILCESPHQVSPVKICDFDLGSGIKLNSDC-SPISTPELLT 248

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
           P GSAE+MAPE+V AF   EAS YDKRCDLWSLGV++YI+L GYPPF G+CG DCGW RG
Sbjct: 249 PCGSAEYMAPEVVEAF-NEEASIYDKRCDLWSLGVILYIMLSGYPPFVGHCGSDCGWDRG 307

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           E C ACQ +LF SIQ+G Y+FPE +W+ IS  AKDLI +LL++DA+KRLSAA VL+HPW+
Sbjct: 308 EACPACQNMLFVSIQEGKYEFPEKDWAHISYGAKDLISKLLLRDAKKRLSAAQVLQHPWV 367

Query: 424 STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWL----- 478
                 +  L TP +++RN SA++L+SFA  A++ NR +++     +  ++         
Sbjct: 368 Q-GNAPYNTLPTPIILQRNSSAKDLTSFAAEAIAMNRQLMEREEEEEGTENSSLCPFVVK 426

Query: 479 ATPTNMRLSPPSESLLVQRRQR 500
           AT  +M+LSPPSES L +RRQ+
Sbjct: 427 ATSCSMQLSPPSESKLAKRRQQ 448

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O08605|MKNK1_MOUSE MAP kinase-interacting serine/threonine-protein kinase 1 OS=Mus musculus GN=Mknk1 PE=1 SV=2

 Score =  297 bits (761), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 145/257 (56%), Positives = 184/257 (71%), Gaps = 3/257 (1%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct: 164 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC-TPITTPELTTPCGSAEYM 222

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V  F   EA+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct: 223 APEVVEVFRD-EATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRMCQN 281

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
            LF SIQ+G Y+FP+ +W+ IS+EAKDLI +LLV+DA++RLSAA VL+HPW+       R
Sbjct: 282 KLFESIQEGKYEFPDKDWAHISNEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ-GQAPER 340

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSE 491
            L TPQV++RN S  +L+ FA  A++ NR + QH       + E       +M+LSPPS+
Sbjct: 341 GLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEQEALAEGLCSMKLSPPSK 400

Query: 492 SLLVQRRQRLQSQSQSD 508
           S L +RR   Q+    D
Sbjct: 401 SRLARRRALAQAGRSRD 417

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q66I46|MKNK2_XENTR MAP kinase-interacting serine/threonine-protein kinase 2 OS=Xenopus tropicalis GN=mknk2 PE=2 SV=1

 Score =  296 bits (759), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 149/260 (57%), Positives = 189/260 (72%), Gaps = 8/260 (3%)

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E L +   +GIAHRDLKPENILC  P Q+SPVK+CDFDLGSGIK N+   SP++TP LLT
Sbjct: 190 EALNYLHNKGIAHRDLKPENILCESPHQVSPVKICDFDLGSGIKLNSDC-SPISTPELLT 248

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
           P GSAE+MAPE+V AF   EAS YDKRCDLWSLGV++YI+L GYPPF G+CG DCGW RG
Sbjct: 249 PCGSAEYMAPEVVEAF-NEEASIYDKRCDLWSLGVILYIMLSGYPPFVGHCGSDCGWDRG 307

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           E C ACQ +LF SIQ+G Y+FPE +W+ IS  AKDLI +LL++DA+KRLSAA VL+HPW+
Sbjct: 308 EACPACQNMLFVSIQEGKYEFPEKDWAHISSGAKDLISKLLLRDAKKRLSAAQVLQHPWV 367

Query: 424 STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWL----- 478
                    L TP +++RN SA++L+SFA  A++ NR +++     +  +          
Sbjct: 368 Q-GNAPDNTLPTPIILQRNSSAKDLTSFAAEAIAMNRQLMEREEEEEGTESSSSCPIVVK 426

Query: 479 ATPTNMRLSPPSESLLVQRR 498
           AT  +M+LSPPSES L +RR
Sbjct: 427 ATSCSMQLSPPSESKLAKRR 446

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q58D94|MKNK1_BOVIN MAP kinase-interacting serine/threonine-protein kinase 1 OS=Bos taurus GN=MKNK1 PE=2 SV=2

 Score =  295 bits (756), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 149/270 (55%), Positives = 193/270 (71%), Gaps = 16/270 (5%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct: 152 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC-TPITTPELTTPCGSAEYM 210

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V  F   EA+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct: 211 APEVVEVFTD-EATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCTVCQN 269

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
            LF SIQ+G Y+FP+ +W+ IS+EAKDLI +LLV+DA++RLSAA VL+HPW+       R
Sbjct: 270 KLFESIQKGKYEFPDKDWAHISNEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ-GQAPER 328

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKN--PKDEQWLATPT-NMRLSP 488
            L TPQV++RN S  +L+ FA  A++ NR + QH    +N   ++ + LA    +++LSP
Sbjct: 329 GLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENEQNKLAEESEVLAEGLCSVKLSP 388

Query: 489 PSESLLVQRRQRLQSQSQSDNLASAGQCGN 518
           PS+S L +RR           LA AG+ G+
Sbjct: 389 PSKSRLARRRA----------LAQAGRSGD 408

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q4G050|MKNK1_RAT MAP kinase-interacting serine/threonine-protein kinase 1 OS=Rattus norvegicus GN=Mknk1 PE=2 SV=1

 Score =  294 bits (752), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/270 (55%), Positives = 188/270 (69%), Gaps = 13/270 (4%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct: 152 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC-TPITTPELTTPCGSAEYM 210

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V  F   EA+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct: 211 APEVVEVFRD-EATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRMCQN 269

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
            LF SIQ+G Y+FP+ +W+ IS EAKDLI +LLV+DA++RLSAA VL+HPW+       R
Sbjct: 270 KLFESIQEGKYEFPDKDWAHISTEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ-GQAPER 328

Query: 432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSE 491
            L TPQV++RN S  +L+ FA  A++ NR + QH       + E       +M+LSPPS+
Sbjct: 329 GLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEHEALAEGLCSMKLSPPSK 388

Query: 492 SLLVQRRQRLQSQSQSDNLASAGQCGNSAS 521
           S L +RR           LA AG+  NS S
Sbjct: 389 SRLARRRA----------LAHAGREANSCS 408

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9BUB5|MKNK1_HUMAN MAP kinase-interacting serine/threonine-protein kinase 1 OS=Homo sapiens GN=MKNK1 PE=1 SV=1

 Score =  291 bits (745), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 142/256 (55%), Positives = 181/256 (70%), Gaps = 3/256 (1%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+MA
Sbjct: 206 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC-TPITTPELTTPCGSAEYMA 264

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE+V  F   +A+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ  
Sbjct: 265 PEVVEVFTD-QATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 323

Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
           LF SIQ+G Y+FP+ +W+ IS EAKDLI +LLV+DA++RLSAA VL+HPW+       + 
Sbjct: 324 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ-GQAPEKG 382

Query: 433 LVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSES 492
           L TPQV++RN S  +L+ FA  A++ NR + QH       + E       +M+LSPP +S
Sbjct: 383 LPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEPEALADGLCSMKLSPPCKS 442

Query: 493 LLVQRRQRLQSQSQSD 508
            L +RR   Q+    D
Sbjct: 443 RLARRRALAQAGRGED 458

May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	539
328776442	528	PREDICTED: MAP kinase-interacting serine	0.402	0.410	0.651	2e-96
383849816	528	PREDICTED: MAP kinase-interacting serine	0.402	0.410	0.651	3e-96
380014526	527	PREDICTED: LOW QUALITY PROTEIN: MAP kina	0.402	0.411	0.651	3e-96
307205539	525	MAP kinase-interacting serine/threonine-	0.402	0.413	0.655	5e-96
195108119	1229	GI23525 [Drosophila mojavensis] gi|19391	0.423	0.185	0.631	1e-95
194744419	1179	GF16618 [Drosophila ananassae] gi|190627	0.423	0.193	0.631	1e-95
345478818	557	PREDICTED: MAP kinase-interacting serine	0.441	0.427	0.669	2e-95
195445386	1212	GK11984 [Drosophila willistoni] gi|19416	0.423	0.188	0.631	2e-95
332373196	489	unknown [Dendroctonus ponderosae]	0.465	0.513	0.645	2e-95
345478816	532	PREDICTED: MAP kinase-interacting serine	0.402	0.407	0.752	2e-95

>gi|328776442|ref|XP_395927.4| PREDICTED: MAP kinase-interacting serine/threonine-protein kinase 1 [Apis mellifera]

 Score =  359 bits (921), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 168/258 (65%), Positives = 202/258 (78%), Gaps = 41/258 (15%)

Query: 36  TATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKE 95
           + +SL++SCFQ+LYRL GE+LG+GAYASVQTC ++ T+LEYAVKIIDK+PGH+R+RVFKE
Sbjct: 54  SGSSLMSSCFQELYRLTGEVLGEGAYASVQTCRSLYTDLEYAVKIIDKIPGHARARVFKE 113

Query: 96  VETFHHCQGHPNIIQLLEYYEDDEN-----------------HER--------------- 123
           VETFHHCQGHPNIIQL+E++ED+E                   ER               
Sbjct: 114 VETFHHCQGHPNIIQLIEFFEDEEKFYLVFEKVNGGQLLSRIQERIHFSEREASQIIQEI 173

Query: 124 -------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                  HK+ IAHRDLKPENILCV+PD+L+P+K+CDFDLGSGIKFN S+ SP+ATP LL
Sbjct: 174 ASALNFLHKKGIAHRDLKPENILCVYPDKLTPIKVCDFDLGSGIKFNNSLSSPVATPQLL 233

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
           TPVGSA+FMAPE+V AF+G EA+ YDKRCDLWSLGV++YILLCGYPPFYGNCG DCGW+R
Sbjct: 234 TPVGSADFMAPEVVEAFIG-EANYYDKRCDLWSLGVIMYILLCGYPPFYGNCGSDCGWER 292

Query: 236 GETCHACQEILFHSIQQG 253
           GE C ACQE+LF SIQ+G
Sbjct: 293 GENCQACQELLFTSIQEG 310

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849816|ref|XP_003700532.1| PREDICTED: MAP kinase-interacting serine/threonine-protein kinase 1-like [Megachile rotundata]

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 168/258 (65%), Positives = 202/258 (78%), Gaps = 41/258 (15%)

Query: 36  TATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKE 95
           + +SL++SCFQ+LYRL GE+LG+GAYASVQTC ++ T+LEYAVKIIDK+PGH+R+RVFKE
Sbjct: 55  SGSSLMSSCFQELYRLTGEVLGEGAYASVQTCRSLYTDLEYAVKIIDKIPGHARARVFKE 114

Query: 96  VETFHHCQGHPNIIQLLEYYEDDEN-----------------HER--------------- 123
           VETFHHCQGHPNIIQL+E++ED+E                   ER               
Sbjct: 115 VETFHHCQGHPNIIQLIEFFEDEEKFYLVFEKVNGGQLLSRIQERIHFSEREASQIVREI 174

Query: 124 -------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                  HK+ IAHRDLKPENILCV+PD+L+P+K+CDFDLGSGIKFN S+ SP+ATP LL
Sbjct: 175 ASALNFLHKKGIAHRDLKPENILCVYPDKLTPIKVCDFDLGSGIKFNNSLSSPVATPQLL 234

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
           TPVGSA+FMAPE+V AF+G EA+ YDKRCDLWSLGV++YILLCGYPPFYGNCG DCGW+R
Sbjct: 235 TPVGSADFMAPEVVEAFIG-EANYYDKRCDLWSLGVIMYILLCGYPPFYGNCGSDCGWER 293

Query: 236 GETCHACQEILFHSIQQG 253
           GE C ACQE+LF SIQ+G
Sbjct: 294 GENCQACQELLFTSIQEG 311

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014526|ref|XP_003691280.1| PREDICTED: LOW QUALITY PROTEIN: MAP kinase-interacting serine/threonine-protein kinase 1-like [Apis florea]

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 168/258 (65%), Positives = 202/258 (78%), Gaps = 41/258 (15%)

Query: 36  TATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKE 95
           + +SL++SCFQ+LYRL GE+LG+GAYASVQTC ++ T+LEYAVKIIDK+PGH+R+RVFKE
Sbjct: 54  SGSSLMSSCFQELYRLTGEVLGEGAYASVQTCRSLYTDLEYAVKIIDKIPGHARARVFKE 113

Query: 96  VETFHHCQGHPNIIQLLEYYEDDEN-----------------HER--------------- 123
           VETFHHCQGHPNIIQL+E++ED+E                   ER               
Sbjct: 114 VETFHHCQGHPNIIQLIEFFEDEEKFYLVFEKVNGGQLLSRIQERIHFSEREASQIIQEI 173

Query: 124 -------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                  HK+ IAHRDLKPENILCV+PD+L+P+K+CDFDLGSGIKFN S+ SP+ATP LL
Sbjct: 174 ASALXFLHKKGIAHRDLKPENILCVYPDKLTPIKVCDFDLGSGIKFNNSLSSPVATPQLL 233

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
           TPVGSA+FMAPE+V AF+G EA+ YDKRCDLWSLGV++YILLCGYPPFYGNCG DCGW+R
Sbjct: 234 TPVGSADFMAPEVVEAFIG-EANYYDKRCDLWSLGVIMYILLCGYPPFYGNCGSDCGWER 292

Query: 236 GETCHACQEILFHSIQQG 253
           GE C ACQE+LF SIQ+G
Sbjct: 293 GENCQACQELLFTSIQEG 310

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205539|gb|EFN83844.1| MAP kinase-interacting serine/threonine-protein kinase 1 [Harpegnathos saltator]

 Score =  358 bits (918), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 169/258 (65%), Positives = 201/258 (77%), Gaps = 41/258 (15%)

Query: 36  TATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKE 95
           + +SLV+SCFQ+LY+L GE+LG+GAYASVQTC ++ T+LEYAVKIIDK+PGH+R+RVFKE
Sbjct: 53  SGSSLVSSCFQELYKLTGEVLGEGAYASVQTCTSLYTDLEYAVKIIDKIPGHARARVFKE 112

Query: 96  VETFHHCQGHPNIIQLLEYYEDDEN-----------------HER--------------- 123
           VETFHHCQGHPNIIQL+E++ED+E                   ER               
Sbjct: 113 VETFHHCQGHPNIIQLIEFFEDEEKFYLVFEKVNGGQLLNRIQERVHFTEREASQIINEI 172

Query: 124 -------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                  HK+ IAHRDLKPENILCV+PD+L+P+K+CDFDLGSGIKFN S+ SP+ATP LL
Sbjct: 173 ASALNFLHKKGIAHRDLKPENILCVYPDKLTPIKVCDFDLGSGIKFNNSLSSPVATPQLL 232

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
           TPVGSAEFMAPE+V AF+G EA+ YDKRCDLWSLGV++YILLCGYPPFYGNCG DCGW R
Sbjct: 233 TPVGSAEFMAPEVVEAFIG-EANYYDKRCDLWSLGVIMYILLCGYPPFYGNCGTDCGWGR 291

Query: 236 GETCHACQEILFHSIQQG 253
           GE C ACQE+LF SIQ+G
Sbjct: 292 GENCQACQELLFTSIQEG 309

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195108119|ref|XP_001998640.1| GI23525 [Drosophila mojavensis] gi|193915234|gb|EDW14101.1| GI23525 [Drosophila mojavensis]

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 170/269 (63%), Positives = 200/269 (74%), Gaps = 41/269 (15%)

Query: 25  EEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL 84
           EE + KRR+K+ ++SL +S FQ+LY+L GEILG+GAYASVQTCVNI T+LEYAVK+IDK+
Sbjct: 89  EEMQKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKI 148

Query: 85  PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN------------------------ 120
           PGH+R+RVF+EVETFHHCQGHP I+QL+E++EDDE                         
Sbjct: 149 PGHARARVFREVETFHHCQGHPGILQLIEFFEDDEKFYLVFEKINGGPLLTRIQEKICFS 208

Query: 121 -HER--------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 164
            HE               HK+ IAHRDLKPENILCV  D L P+K+CDFDLGSGIKF T 
Sbjct: 209 EHEAAQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTD 268

Query: 165 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           + SP ATP LLTPVGSAEFMAPE+V+ F+G EA+ YDKRCDLWSLGV+ YILLCGYPPF 
Sbjct: 269 ISSPAATPQLLTPVGSAEFMAPEVVDLFVG-EANYYDKRCDLWSLGVIAYILLCGYPPFS 327

Query: 225 GNCGEDCGWQRGETCHACQEILFHSIQQG 253
           GNCGEDCGW RGE C  CQE+LF SIQ+G
Sbjct: 328 GNCGEDCGWNRGENCRTCQELLFESIQEG 356

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194744419|ref|XP_001954692.1| GF16618 [Drosophila ananassae] gi|190627729|gb|EDV43253.1| GF16618 [Drosophila ananassae]

 Score =  356 bits (914), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 170/269 (63%), Positives = 199/269 (73%), Gaps = 41/269 (15%)

Query: 25  EEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL 84
           EE + KRR+K+ ++SL +S FQ+LY+L GEILG+GAYASVQTCVNI T+LEYAVK+IDK+
Sbjct: 102 EEMQKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKI 161

Query: 85  PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN------------------------ 120
           PGH+R+RVF+EVETFHHCQGHP I+QL+E++EDDE                         
Sbjct: 162 PGHARARVFREVETFHHCQGHPGILQLIEFFEDDEKFYLVFEKINGGPLLTRIQEHICFS 221

Query: 121 -HER--------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 164
            HE               HK+ IAHRDLKPENILCV  D L P+K+CDFDLGSGIKF T 
Sbjct: 222 EHEASQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTD 281

Query: 165 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           + SP ATP LLTPVGSAEFMAPE+V+ F+G EA  YDKRCDLWSLGV+ YILLCGYPPF 
Sbjct: 282 ISSPAATPQLLTPVGSAEFMAPEVVDLFVG-EAHYYDKRCDLWSLGVIAYILLCGYPPFS 340

Query: 225 GNCGEDCGWQRGETCHACQEILFHSIQQG 253
           GNCGEDCGW RGE C  CQE+LF SIQ+G
Sbjct: 341 GNCGEDCGWNRGENCRTCQELLFESIQEG 369

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345478818|ref|XP_003423815.1| PREDICTED: MAP kinase-interacting serine/threonine-protein kinase 1-like isoform 2 [Nasonia vitripennis]

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 176/263 (66%), Positives = 203/263 (77%), Gaps = 25/263 (9%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++GIAHRDLKPENILCVHPD+L+P+K+CDFDLGSGIKFN S  SPLATP LLTPVGSAEF
Sbjct: 216 KKGIAHRDLKPENILCVHPDKLTPIKICDFDLGSGIKFNNSASSPLATPQLLTPVGSAEF 275

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+V AF+G EA+ YDKRCDLWSLGV++YILLCGYPPFYGNCG +CGW+RGE C ACQ
Sbjct: 276 MAPEVVEAFIG-EANYYDKRCDLWSLGVIMYILLCGYPPFYGNCGTNCGWERGENCRACQ 334

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS---TAG 427
           ++LF SIQ+G Y+FP+ EW+ IS EAKDLIR LLVK A +RLSA  VL HPWI+    AG
Sbjct: 335 QMLFTSIQEGKYEFPDAEWACISKEAKDLIRGLLVKQACQRLSAECVLAHPWINPGPAAG 394

Query: 428 -TAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRL 486
            TA+RPL TPQ IRRN SARELS FAESAM+ NRV+LQHFSI              N+  
Sbjct: 395 ETANRPLATPQTIRRNNSARELSVFAESAMAVNRVVLQHFSI--------------NL-- 438

Query: 487 SPPSESLLVQRRQRLQSQSQSDN 509
               E LL  R  RL + S  D+
Sbjct: 439 ----EELLENREPRLSTSSTDDD 457

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195445386|ref|XP_002070300.1| GK11984 [Drosophila willistoni] gi|194166385|gb|EDW81286.1| GK11984 [Drosophila willistoni]

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 170/269 (63%), Positives = 200/269 (74%), Gaps = 41/269 (15%)

Query: 25  EEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL 84
           EE + KRR+K+ ++SL +S FQ+LY+L GEILG+GAYASVQTCVNI T+LEYAVK+IDK+
Sbjct: 87  EEMQKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTCVNIYTDLEYAVKVIDKI 146

Query: 85  PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN------------------------ 120
           PGH+R+RVF+EVETFHHCQGHP I+QL+E++EDDE                         
Sbjct: 147 PGHARARVFREVETFHHCQGHPGILQLIEFFEDDEKFYLVFEKINGGPLLTRIQEHICFS 206

Query: 121 -HER--------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 164
            HE               HK+ IAHRDLKPENILCV  D L P+K+CDFDLGSGIKF T 
Sbjct: 207 EHEAAQIIKEIASGLDFLHKKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTD 266

Query: 165 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           + SP ATP LLTPVGSAEFMAPE+V+ F+G EA+ YDKRCDLWSLGV+ YILLCGYPPF 
Sbjct: 267 ISSPAATPQLLTPVGSAEFMAPEVVDLFVG-EANYYDKRCDLWSLGVIAYILLCGYPPFS 325

Query: 225 GNCGEDCGWQRGETCHACQEILFHSIQQG 253
           GNCGEDCGW RGE C  CQE+LF SIQ+G
Sbjct: 326 GNCGEDCGWNRGENCRTCQELLFESIQEG 354

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373196|gb|AEE61739.1| unknown [Dendroctonus ponderosae]

 Score =  355 bits (912), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 173/268 (64%), Positives = 202/268 (75%), Gaps = 17/268 (6%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILCV+ D+L PVK+CDFDLGSGI+F TSV SPLATP LLTPVGSAEFM
Sbjct: 206 KGIAHRDLKPENILCVNKDRLCPVKICDFDLGSGIRFQTSVASPLATPQLLTPVGSAEFM 265

Query: 312 APEIVNAFMG-PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           APEIV AF+G  +   YDKRCDLWSLGV+ YILL GYPPFYG CGEDCGW+RGE C+ CQ
Sbjct: 266 APEIVEAFIGDSDTQAYDKRCDLWSLGVIAYILLSGYPPFYGKCGEDCGWERGENCNTCQ 325

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
           E+LFHSIQ+G YDFP  EW +IS EAKDLI  LL+K+ARKRLSA  VL+HPW+  A  A 
Sbjct: 326 ELLFHSIQEGQYDFPSPEWDSISAEAKDLIANLLIKNARKRLSAQQVLQHPWLKCASDA- 384

Query: 431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSI---------------CKNPKDE 475
            PLVTP VI++N SARELS FAESAM+ NRV+ QHFS+                  P  +
Sbjct: 385 APLVTPSVIKKNNSARELSQFAESAMAVNRVVQQHFSMNLDYMERPEIYPKEGSSTPLHK 444

Query: 476 QWLATPTNMRLSPPSESLLVQRRQRLQS 503
              ++     LSPPSES L+QRR +++S
Sbjct: 445 TTCSSAIMFGLSPPSESNLMQRRVKVRS 472

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345478816|ref|XP_003423814.1| PREDICTED: MAP kinase-interacting serine/threonine-protein kinase 1-like isoform 1 [Nasonia vitripennis]

 Score =  355 bits (912), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 167/222 (75%), Positives = 191/222 (86%), Gaps = 5/222 (2%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++GIAHRDLKPENILCVHPD+L+P+K+CDFDLGSGIKFN S  SPLATP LLTPVGSAEF
Sbjct: 191 KKGIAHRDLKPENILCVHPDKLTPIKICDFDLGSGIKFNNSASSPLATPQLLTPVGSAEF 250

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+V AF+G EA+ YDKRCDLWSLGV++YILLCGYPPFYGNCG +CGW+RGE C ACQ
Sbjct: 251 MAPEVVEAFIG-EANYYDKRCDLWSLGVIMYILLCGYPPFYGNCGTNCGWERGENCRACQ 309

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS---TAG 427
           ++LF SIQ+G Y+FP+ EW+ IS EAKDLIR LLVK A +RLSA  VL HPWI+    AG
Sbjct: 310 QMLFTSIQEGKYEFPDAEWACISKEAKDLIRGLLVKQACQRLSAECVLAHPWINPGPAAG 369

Query: 428 -TAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSI 468
            TA+RPL TPQ IRRN SARELS FAESAM+ NRV+LQHFSI
Sbjct: 370 ETANRPLATPQTIRRNNSARELSVFAESAMAVNRVVLQHFSI 411

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	539
FB|FBgn0017581	1150	Lk6 "Lk6" [Drosophila melanoga	0.402	0.188	0.688	4.7e-116
UNIPROTKB|E1BCH7	464	MKNK2 "Uncharacterized protein	0.434	0.504	0.602	1.4e-99
UNIPROTKB|Q9HBH9	465	MKNK2 "MAP kinase-interacting	0.389	0.451	0.646	4.7e-99
RGD|1305728	459	Mknk2 "MAP kinase-interacting	0.426	0.501	0.609	1.6e-98
MGI|MGI:894279	459	Mknk2 "MAP kinase-interacting	0.434	0.509	0.606	2.6e-98
ZFIN|ZDB-GENE-030829-2	475	mknk2b "MAP kinase-interacting	0.434	0.492	0.580	5.3e-98
MGI|MGI:894316	427	Mknk1 "MAP kinase-interacting	0.432	0.545	0.587	1.3e-96
UNIPROTKB|F1N9J6	424	MKNK1 "Uncharacterized protein	0.432	0.549	0.575	3.3e-96
UNIPROTKB|B8XSK1	416	MKNK1 "MAP kinase interacting	0.432	0.560	0.587	6.9e-96
ZFIN|ZDB-GENE-030131-6099	472	mknk2a "MAP kinase-interacting	0.434	0.495	0.564	8.8e-96

FB|FBgn0017581 Lk6 "Lk6" [Drosophila melanogaster (taxid:7227)]

 Score = 826 (295.8 bits), Expect = 4.7e-116, Sum P(2) = 4.7e-116
 Identities = 157/228 (68%), Positives = 176/228 (77%)

Query:   251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             ++GIAHRDLKPENILCV  D L P+K+CDFDLGSGIKF T + SP ATP LLTPVGSAEF
Sbjct:   232 KKGIAHRDLKPENILCVKTDSLCPIKICDFDLGSGIKFTTDISSPAATPQLLTPVGSAEF 291

Query:   311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
             MAPE+V+ F+G EA  YDKRCDLWSLGV+ YILLCGYPPF GNCGEDCGW RGE C  CQ
Sbjct:   292 MAPEVVDLFVG-EAHYYDKRCDLWSLGVIAYILLCGYPPFSGNCGEDCGWNRGENCRTCQ 350

Query:   371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI------- 423
             E+LF SIQ+GH+ FPE EW  +SDEAKDLI  LLVK A  RLSA +VL HPWI       
Sbjct:   351 ELLFESIQEGHFSFPEAEWHDVSDEAKDLISNLLVKKASNRLSAEAVLNHPWIRMCEQEP 410

Query:   424 --STAGTAHRPLVTPQVIRRN-QSARELSSFAESAMSANRVILQHFSI 468
               S  G  H+ L TP  IRRN QSARE+S FAESAM+  RV+LQHFS+
Sbjct:   411 PASKHGRRHKALQTPSNIRRNHQSAREISQFAESAMAVKRVVLQHFSM 458

GO:0004672 "protein kinase activity" evidence=IDA

GO:0007017 "microtubule-based process" evidence=IMP

GO:0005635 "nuclear envelope" evidence=IDA

GO:0005874 "microtubule" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=IGI

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0040008 "regulation of growth" evidence=IMP

GO:0016301 "kinase activity" evidence=IMP

UNIPROTKB|E1BCH7 MKNK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 747 (268.0 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
 Identities = 147/244 (60%), Positives = 180/244 (73%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct:   199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G+CG DCGW RGE C ACQ 
Sbjct:   258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGHCGSDCGWDRGEACPACQN 316

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-H 430
             +LF SIQ+G Y+FPE +W+ IS  AKDLI +LLV+DA++RLSAA VL+HPW+   G A  
Sbjct:   317 MLFESIQEGKYEFPEKDWAHISFAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 374

Query:   431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWL-----ATPTNMR 485
               L TP V++RN  A++L+SFA  A++ NR + Q        + EQ       AT   ++
Sbjct:   375 NTLPTPMVLQRNSCAKDLTSFAAEAIAMNRQLAQREEDAAEEEAEQGQPVVIRATSRCLQ 434

Query:   486 LSPP 489
             LSPP
Sbjct:   435 LSPP 438

GO:0071243 "cellular response to arsenic-containing substance" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q9HBH9 MKNK2 "MAP kinase-interacting serine/threonine-protein kinase 2" [Homo sapiens (taxid:9606)]

 Score = 742 (266.3 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
 Identities = 139/215 (64%), Positives = 169/215 (78%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct:   199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ 
Sbjct:   258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 316

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-H 430
             +LF SIQ+G Y+FP+ +W+ IS  AKDLI +LLV+DA++RLSAA VL+HPW+   G A  
Sbjct:   317 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 374

Query:   431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQH 465
               L TP V++RN  A++L+SFA  A++ NR + QH
Sbjct:   375 NTLPTPMVLQRNSCAKDLTSFAAEAIAMNRQLAQH 409

GO:0006417 "regulation of translation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016605 "PML body" evidence=IEA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0030097 "hemopoiesis" evidence=IDA

GO:0071243 "cellular response to arsenic-containing substance" evidence=IDA

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

RGD|1305728 Mknk2 "MAP kinase-interacting serine/threonine kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 746 (267.7 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
 Identities = 148/243 (60%), Positives = 183/243 (75%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct:   199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G+CG DCGW RGE C ACQ 
Sbjct:   258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGHCGSDCGWDRGEACPACQN 316

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-H 430
             +LF SIQ+G Y+FP+ +WS IS  AKDLI +LLV+DA++RLSAA VL+HPW+   G A  
Sbjct:   317 MLFESIQEGKYEFPDKDWSHISFAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 374

Query:   431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNP--KDEQWL--ATPTNMRL 486
               L TP V++RN  A++L+SFA  A++ NR + Q    C+    +D+  L  AT   ++L
Sbjct:   375 NTLPTPLVLQRNSCAKDLTSFAAEAIAMNRQLAQ----CEEDAGQDQPVLIRATSRCLQL 430

Query:   487 SPP 489
             SPP
Sbjct:   431 SPP 433

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0006417 "regulation of translation" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA;ISO

GO:0007243 "intracellular protein kinase cascade" evidence=IEA;ISO

GO:0016605 "PML body" evidence=IEA

GO:0030097 "hemopoiesis" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0071243 "cellular response to arsenic-containing substance" evidence=IEA;ISO

MGI|MGI:894279 Mknk2 "MAP kinase-interacting serine/threonine kinase 2" [Mus musculus (taxid:10090)]

 Score = 744 (267.0 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
 Identities = 145/239 (60%), Positives = 178/239 (74%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct:   199 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 257

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G+CG DCGW RGE C ACQ 
Sbjct:   258 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGHCGSDCGWDRGEACPACQN 316

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-H 430
             +LF SIQ+G Y+FP+ +WS IS  AKDLI +LLV+DA++RLSAA VL+HPW+   G A  
Sbjct:   317 MLFESIQEGKYEFPDKDWSHISFAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPE 374

Query:   431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPP 489
               L TP V++RN  A++L+SFA  A++ NR + Q        +     AT   ++LSPP
Sbjct:   375 NTLPTPLVLQRNSCAKDLTSFAAEAIAMNRQLAQCEEDAGQDQPVVIRATSRCLQLSPP 433

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006417 "regulation of translation" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0006915 "apoptotic process" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030097 "hemopoiesis" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0071243 "cellular response to arsenic-containing substance" evidence=ISO

ZFIN|ZDB-GENE-030829-2 mknk2b "MAP kinase-interacting serine/threonine kinase 2b" [Danio rerio (taxid:7955)]

 Score = 729 (261.7 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
 Identities = 140/241 (58%), Positives = 180/241 (74%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +G+AHRDLKPENILC H  ++SPVK+CDFDLGSGIK N+   SP++TP LLTP GSAE+M
Sbjct:   200 KGMAHRDLKPENILCEHEHRISPVKICDFDLGSGIKLNSD-SSPISTPELLTPCGSAEYM 258

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V AF   EA+ YDKRCDLWSLGV++YI+L GYPPF G CG DCGW+ GE C ACQ 
Sbjct:   259 APEVVEAF-NEEATIYDKRCDLWSLGVILYIMLSGYPPFVGRCGSDCGWENGEPCQACQN 317

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
             +LF SIQ+G Y+FPE EW+ IS  AKDLI +LLV+DA+KRLSAA VL+HPW+   G A  
Sbjct:   318 MLFESIQEGKYEFPEKEWAHISSSAKDLISKLLVRDAKKRLSAAQVLQHPWVQ--GGAFD 375

Query:   432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDE--QWL-ATPTNMRLSP 488
              L +  + +RN S ++L+ FA  A++ NR + Q   + +  + +  Q + A+ T+MRLSP
Sbjct:   376 CLPSSNLPQRNSSTKDLTFFAGKAVAMNRQLAQQDDLEEQQQQDSPQVITASSTSMRLSP 435

Query:   489 P 489
             P
Sbjct:   436 P 436

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:894316 Mknk1 "MAP kinase-interacting serine/threonine kinase 1" [Mus musculus (taxid:10090)]

 Score = 732 (262.7 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
 Identities = 141/240 (58%), Positives = 181/240 (75%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct:   164 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC-TPITTPELTTPCGSAEYM 222

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V  F   EA+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct:   223 APEVVEVFRD-EATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRMCQN 281

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-H 430
              LF SIQ+G Y+FP+ +W+ IS+EAKDLI +LLV+DA++RLSAA VL+HPW+   G A  
Sbjct:   282 KLFESIQEGKYEFPDKDWAHISNEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQAPE 339

Query:   431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPT-NMRLSPP 489
             R L TPQV++RN S  +L+ FA  A++ NR + QH    +  ++++ LA    +M+LSPP
Sbjct:   340 RGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEEN-ELAEEQEALAEGLCSMKLSPP 398

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005524 "ATP binding" evidence=ISO;IDA

GO:0006417 "regulation of translation" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0006950 "response to stress" evidence=NAS

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

UNIPROTKB|F1N9J6 MKNK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 725 (260.3 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
 Identities = 138/240 (57%), Positives = 179/240 (74%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N++  +P+ TP L TP GSAE+M
Sbjct:   163 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNSAC-TPITTPELTTPCGSAEYM 221

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V  F   EA+ YDKRCDLWSLGV++YI+L GYPPF GNCG DCGW RGE C  CQ+
Sbjct:   222 APEVVEVFT-EEATFYDKRCDLWSLGVILYIMLSGYPPFVGNCGTDCGWDRGEVCRVCQQ 280

Query:   372 I-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA- 429
               LF SIQ+G Y+FP+ +WS IS EAKDLI +LLV+DA++RLSAA VL+H W+   G A 
Sbjct:   281 NKLFESIQEGKYEFPDKDWSHISSEAKDLISKLLVRDAKERLSAAQVLEHSWVQ--GQAP 338

Query:   430 HRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPP 489
              R + TPQV++RN S ++L+ FA  A++ NR + QH +   + + E       +M+LSPP
Sbjct:   339 ERGIPTPQVLQRNSSTKDLTLFAAEAIALNRQLSQHENEL-SAEQESVARAVCSMKLSPP 397

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

UNIPROTKB|B8XSK1 MKNK1 "MAP kinase interacting serine/threonine kinase 1" [Sus scrofa (taxid:9823)]

 Score = 728 (261.3 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
 Identities = 141/240 (58%), Positives = 179/240 (74%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct:   152 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGVKLNNSC-TPITTPELTTPCGSAEYM 210

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V  F   EA+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct:   211 APEVVEVFTD-EATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCPVCQN 269

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-H 430
              LF SIQ+G Y+FP+ +W+ IS EAKDLI +LLV+DA++RLSAA VL+HPW+   G A  
Sbjct:   270 KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQAPE 327

Query:   431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPT-NMRLSPP 489
             R L TPQV++RN S  +L+ FA  A++ NR + QH    +  K+ + LA    +++LSPP
Sbjct:   328 RGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEEN-ELAKESEALAEGLCSVKLSPP 386

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-030131-6099 mknk2a "MAP kinase-interacting serine/threonine kinase 2a" [Danio rerio (taxid:7955)]

 Score = 691 (248.3 bits), Expect = 8.8e-96, Sum P(2) = 8.8e-96
 Identities = 135/239 (56%), Positives = 172/239 (71%)

Query:   252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
             +G+AHRDLKPENILC H D++SPVK+CDFDLGSGIK N+   SP++TP LLTP GSAE+M
Sbjct:   199 KGMAHRDLKPENILCEHSDRISPVKICDFDLGSGIKLNSD-SSPISTPELLTPCGSAEYM 257

Query:   312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
             APE+V AF   EAS YDKRCDLWSLGV++YI+L GYPPF G CG DCGW  GE C ACQ 
Sbjct:   258 APEVVEAF-NEEASIYDKRCDLWSLGVILYIMLSGYPPFVGRCGTDCGWDWGEPCQACQS 316

Query:   372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
             +LF SIQ+G Y+FPE +W+ IS  AKDLI +LLV+DA+ RLSAA VL+HPW+   G A  
Sbjct:   317 MLFESIQEGKYEFPEKDWAHISPAAKDLITKLLVRDAKDRLSAAQVLQHPWVK--GCAPN 374

Query:   432 PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPT-NMRLSPP 489
              +    + +R  SA++L+ FA  A++ NR + +             L++ + +M LSPP
Sbjct:   375 TVSASILHQRGGSAQDLTFFAGQAVAMNRQLAEREESEDLSLSSPLLSSSSGSMLLSPP 433

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5U2N4	MKNK2_RAT	2, ., 7, ., 1, 1, ., 1	0.6064	0.4564	0.5359	yes	N/A
Q9HBH9	MKNK2_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5891	0.4508	0.5225	yes	N/A
Q66JF3	MKNK1_XENTR	2, ., 7, ., 1, 1, ., 1	0.5675	0.4730	0.6115	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	539
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-49
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-46
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-45
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-39
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-36
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-31
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-28
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-27
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-27
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-27
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-26
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-26
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-26
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-26
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-26
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-25
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-24
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-24
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-24
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-23
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-23
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-23
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-22
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-22
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-22
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-21
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-21
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-20
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-20
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-20
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-20
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	9e-20
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-19
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-19
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-18
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-18
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-18
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-18
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-18
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-18
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	9e-18
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	9e-18
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-17
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-17
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-17
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-17
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-17
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	9e-17
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-16
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-16
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-16
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-16
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-16
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-15
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-15
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-15
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-15
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-15
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-15
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-15
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-15
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	7e-15
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-15
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-14
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-14
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-14
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-14
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-14
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-14
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-14
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-14
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-14
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	4e-14
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	6e-14
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-14
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	7e-14
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-14
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-13
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-13
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-13
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-13
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-13
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-13
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-13
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-13
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-13
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-13
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-13
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-13
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-13
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-13
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-13
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-13
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-13
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	6e-13
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	8e-13
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	9e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-12
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-12
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-12
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-12
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-12
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-12
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-12
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-12
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-12
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-12
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-12
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-12
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-12
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	8e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	9e-12
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-12
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-11
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-11
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-11
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-11
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-11
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-11
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-11
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-11
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	4e-11
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-11
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-11
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-11
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-11
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	6e-11
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	7e-11
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	7e-11
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-11
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	8e-11
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-11
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-11
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	9e-11
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-10
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-10
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-10
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-10
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-10
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-10
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-10
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-10
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-10
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	5e-10
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	6e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	6e-10
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-10
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	8e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	8e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	9e-10
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	9e-10
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	1e-09
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-09
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-09
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-09
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-09
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-09
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-09
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-09
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	3e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-09
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-09
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-09
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-09
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-09
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-09
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-09
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	5e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-09
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	8e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	9e-09
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	9e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	9e-09
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-08
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-08
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-08
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-08
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-08
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-08
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-08
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-08
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-08
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-08
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-08
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-08
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-08
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-08
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-08
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-08
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	6e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	7e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	7e-08
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	9e-08
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-08
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-07
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-07
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-07
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-07
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-07
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-07
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-07
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-07
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-07
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-07
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-07
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-07
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-07
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	6e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	7e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	7e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	7e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	7e-07
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	8e-07
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-06
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-06
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-06
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-06
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-06
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-06
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-06
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-06
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-06
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-06
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-06
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	5e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	6e-06
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	6e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	6e-06
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	6e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-06
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	7e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	7e-06
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	9e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	9e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-05
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-05
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-05
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-05
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-05
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-05
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	3e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-05
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-05
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	5e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	6e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	6e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	7e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	8e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	9e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	9e-05
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-04
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	3e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	8e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.001
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.001
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	0.001
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.001
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.002
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	0.002
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	0.002
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.002
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	0.002
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.002
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.003
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.004
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	0.004
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.004
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	0.004
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  168 bits (429), Expect = 9e-49
 Identities = 77/192 (40%), Positives = 94/192 (48%), Gaps = 40/192 (20%)

Query: 237 ETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           E     ++IL      HS  +GI HRDLKPENIL         VKL DF L   +     
Sbjct: 98  EARFYLRQILSALEYLHS--KGIVHRDLKPENILLDEDGH---VKLADFGLARQLD---- 148

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                    L T VG+ E+MAPE++         GY K  D+WSLGV++Y LL G PPF 
Sbjct: 149 -----PGEKLTTFVGTPEYMAPEVLLG------KGYGKAVDIWSLGVILYELLTGKPPFP 197

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
           G+                   LF  I +    FP  EW  IS EAKDLIR+LLVKD  KR
Sbjct: 198 GDDQLL--------------ELFKKIGKPKPPFPPPEWD-ISPEAKDLIRKLLVKDPEKR 242

Query: 412 LSAASVLKHPWI 423
           L+A   L+HP+ 
Sbjct: 243 LTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  162 bits (411), Expect = 4e-46
 Identities = 68/176 (38%), Positives = 91/176 (51%), Gaps = 30/176 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRDLKPENIL         VK+ DF L   +  ++S  +        T VG+
Sbjct: 115 HS--NGIIHRDLKPENILLDENGV---VKIADFGLAKKLLKSSSSLT--------TFVGT 161

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++        +GY  + D+WSLGV++Y LL G PPF G    D          
Sbjct: 162 PWYMAPEVLL-----GGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD---------- 206

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             Q  L   I     +F E +WS+ S+EAKDLI++ L KD  KR +A  +L+HPW 
Sbjct: 207 --QLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  158 bits (402), Expect = 6e-45
 Identities = 66/216 (30%), Positives = 92/216 (42%), Gaps = 60/216 (27%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQGHPNIIQ 110
             E LG+G++  V    +  T    A+K+I K      R R+ +E++     + HPNI++
Sbjct: 3   ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK-HPNIVR 61

Query: 111 LLEYYEDD--------------------------ENHERH--------------KRIAHR 130
           L + +ED+                          E+  R               K I HR
Sbjct: 62  LYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHR 121

Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           DLKPENIL         VKL DF L   +              L T VG+ E+MAPE++ 
Sbjct: 122 DLKPENILLDEDGH---VKLADFGLARQLD---------PGEKLTTFVGTPEYMAPEVLL 169

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                   GY K  D+WSLGV++Y LL G PPF G+
Sbjct: 170 G------KGYGKAVDIWSLGVILYELLTGKPPFPGD 199

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  142 bits (360), Expect = 7e-39
 Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 63/223 (28%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS--RSRVFKEVETFHHCQGHPNII 109
               LG G++ +V    +  T    AVKI+ K    S       +E+        HPNI+
Sbjct: 3   LLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS-HPNIV 61

Query: 110 QLLEYYEDDEN------------------------------------------HERHKRI 127
           +L++ +ED ++                                          H     I
Sbjct: 62  RLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSN--GI 119

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDLKPENIL         VK+ DF L   +  ++S  +        T VG+  +MAPE
Sbjct: 120 IHRDLKPENILLDENGV---VKIADFGLAKKLLKSSSSLT--------TFVGTPWYMAPE 168

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           ++        +GY  + D+WSLGV++Y LL G PPF G    D
Sbjct: 169 VLL-----GGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD 206

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  134 bits (339), Expect = 5e-36
 Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 43/179 (24%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVG 306
           HS   GI +RDLKPENIL    D    +KL DF L        +  +         T  G
Sbjct: 110 HS--LGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTN---------TFCG 155

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           + E++APE++         GY K  D WSLGV++Y +L G PPFY    ED         
Sbjct: 156 TPEYLAPEVL------LGKGYGKAVDWWSLGVLLYEMLTGKPPFY---AED--------- 197

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS---VLKHPW 422
              ++ ++  I +    FPE     +S EA+DLI  LL KD  KRL +     +  HP+
Sbjct: 198 ---RKEIYEKILKDPLRFPEF----LSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  120 bits (304), Expect = 5e-31
 Identities = 62/177 (35%), Positives = 84/177 (47%), Gaps = 29/177 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             GI HRDLKP+NIL    D    +KL DF L         ++           VG+ ++
Sbjct: 111 SNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDY 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++         G+ K  D WSLG ++Y  L G PPF+           GET     
Sbjct: 168 IAPEVILG------QGHSKTVDWWSLGCILYEFLVGIPPFH-----------GET----P 206

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS---VLKHPWIS 424
           E +F +I  G  ++PE     +SDEA DLI +LLV D  KRL A S   +  HP+  
Sbjct: 207 EEIFQNILNGKIEWPEDV--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  113 bits (285), Expect = 3e-28
 Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 58/195 (29%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP------ 304
            +GI HRDLKPENIL    D+   +K+ DF  G+  K      SP +     T       
Sbjct: 120 SKGIIHRDLKPENILL---DKDMHIKITDF--GTA-KVLDPNSSPESNKGDATNIDSQIE 173

Query: 305 ---------VGSAEFMAPEIVNAFMGPEASGYDKRC----DLWSLGVVVYILLCGYPPFY 351
                    VG+AE+++PE++N          +K      DLW+LG ++Y +L G PPF 
Sbjct: 174 KNRRRFASFVGTAEYVSPELLN----------EKPAGKSSDLWALGCIIYQMLTGKPPFR 223

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
           G+  E   +             F  I +  Y FP         +AKDLI +LLV D + R
Sbjct: 224 GS-NE---YL-----------TFQKILKLEYSFPPN----FPPDAKDLIEKLLVLDPQDR 264

Query: 412 L----SAASVLKHPW 422
           L        +  HP+
Sbjct: 265 LGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  109 bits (275), Expect = 2e-27
 Identities = 56/203 (27%), Positives = 80/203 (39%), Gaps = 62/203 (30%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQGHPNIIQLLEY 114
           LG+G + +V    +  T  + A+KII K         + +E+E       HPNI++L   
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-HPNIVKLYGV 59

Query: 115 YEDDEN-------------------------------------------HERHKRIAHRD 131
           +ED+ +                                           H     I HRD
Sbjct: 60  FEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHS--NGIIHRD 117

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LKPENIL +  D    VKL DF L        S        LL T VG+  +MAPE++  
Sbjct: 118 LKPENIL-LDSDNGK-VKLADFGL--------SKLLTSDKSLLKTIVGTPAYMAPEVLL- 166

Query: 192 FMGPEASGYDKRCDLWSLGVVVY 214
                   Y ++ D+WSLGV++Y
Sbjct: 167 ----GKGYYSEKSDIWSLGVILY 185

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  109 bits (276), Expect = 3e-27
 Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 35/177 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRD+K  NIL V  D +  VKL DF  G   +    +          +  G+
Sbjct: 118 HS--NGIVHRDIKGANIL-VDSDGV--VKLADF--GCAKR----LGDIETGEGTGSVRGT 166

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++          Y +  D+WSLG  V  +  G PP+    G            
Sbjct: 167 PYWMAPEVIRG------EEYGRAADIWSLGCTVIEMATGKPPWS-ELGN----------- 208

Query: 368 ACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                L+     G   + PE     +S+EAKD +R+ L +D +KR +A  +L+HP++
Sbjct: 209 -PMAALYKIGSSGEPPEIPEH----LSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  110 bits (278), Expect = 4e-27
 Identities = 59/183 (32%), Positives = 82/183 (44%), Gaps = 46/183 (25%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    I +RDLKPEN+L    D    +K+ DF     +K  T            T  G+
Sbjct: 118 HS--LDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRTY-----------TLCGT 161

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            E++APEI+       + GY K  D W+LG+++Y +L GYPPF+ +          +   
Sbjct: 162 PEYLAPEII------LSKGYGKAVDWWALGILIYEMLAGYPPFFDD-------NPIQI-- 206

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPW 422
                 +  I +G   FP    S  S +AKDLIR LL  D  KRL         +  HPW
Sbjct: 207 ------YEKILEGKVRFP----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256

Query: 423 IST 425
            + 
Sbjct: 257 FAG 259

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  107 bits (271), Expect = 2e-26
 Identities = 58/220 (26%), Positives = 82/220 (37%), Gaps = 73/220 (33%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ------GHPNII 109
           LGKG++  V       T   YA+K++ K     +    KEVE     +       HP I+
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKK----KKIIKRKEVEHTLTERNILSRINHPFIV 56

Query: 110 QLLEYYEDDEN------------------------------------------HERHKRI 127
           +L   ++ +E                                           H     I
Sbjct: 57  KLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHS--LGI 114

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
            +RDLKPENIL    D    +KL DF L        +  +         T  G+ E++AP
Sbjct: 115 IYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTN---------TFCGTPEYLAP 162

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E++         GY K  D WSLGV++Y +L G PPFY  
Sbjct: 163 EVL------LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  110 bits (275), Expect = 2e-26
 Identities = 67/263 (25%), Positives = 98/263 (37%), Gaps = 13/263 (4%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            +GI HRD+KPENIL     ++  VKL DF  G          +     L  T VG+  +
Sbjct: 119 SKGIIHRDIKPENILLDRDGRV--VKLIDF--GLAKLLPDPGSTSSIPALPSTSVGTPGY 174

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+    +G   +      D+WSLG+ +Y LL G PPF G        Q  +      
Sbjct: 175 MAPEV---LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI----- 226

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
            IL                  IS  A DL+++LL KD + RLS++S L H  ++      
Sbjct: 227 -ILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKE 285

Query: 431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPS 490
             L        +   R     +  A+ ++   L          D  +        +S   
Sbjct: 286 SDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSP 345

Query: 491 ESLLVQRRQRLQSQSQSDNLASA 513
            +          S+  S    SA
Sbjct: 346 HNSSSLLLSTASSKRSSLPKISA 368

Length = 384

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  107 bits (269), Expect = 5e-26
 Identities = 69/236 (29%), Positives = 97/236 (41%), Gaps = 80/236 (33%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDK----LPGHSRSRVFKEVETFHHCQGHPNI 108
           G+I+G+G++++V       T  EYA+KI+DK         +  V  E E      GHP I
Sbjct: 6   GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKY-VKIEKEVLTRLNGHPGI 64

Query: 109 IQL-------------LEYYED-------------DENHERH--------------KRIA 128
           I+L             LEY  +             DE   R               K I 
Sbjct: 65  IKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGII 124

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP----------- 177
           HRDLKPENIL    D+   +K+ DF  G+  K      SP +     T            
Sbjct: 125 HRDLKPENILL---DKDMHIKITDF--GTA-KVLDPNSSPESNKGDATNIDSQIEKNRRR 178

Query: 178 ----VGSAEFMAPEIVNAFMGPEASGYDKRC----DLWSLGVVVYILLCGYPPFYG 225
               VG+AE+++PE++N          +K      DLW+LG ++Y +L G PPF G
Sbjct: 179 FASFVGTAEYVSPELLN----------EKPAGKSSDLWALGCIIYQMLTGKPPFRG 224

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  108 bits (271), Expect = 6e-26
 Identities = 63/174 (36%), Positives = 83/174 (47%), Gaps = 31/174 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G  HRDLKPEN L    D    +KL DF L  GI   T  +S          VGS ++
Sbjct: 119 ELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIV--TYANSV---------VGSPDY 164

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++         GYD   D WSLG ++Y  LCG+PPF G+   +  W   E     +
Sbjct: 165 MAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-W---ENLKYWK 214

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           E L    Q+  YD P       SDEA DLI +L+   +R+  S   +  HP+  
Sbjct: 215 ETL----QRPVYDDPRFNL---SDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  106 bits (266), Expect = 6e-26
 Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 39/178 (21%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+GI HRD+KPEN+L    DQ   +KL DF L      N               VG+ ++
Sbjct: 115 QRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLENKKF------------VGTPDY 159

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE +         G DK  D WSLG V++  L GYPPF+    +              
Sbjct: 160 LAPETILG------VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA------------- 200

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA---ASVLKHPWIST 425
             +F +I     ++PE      S EA DLI RLL  D  KRL A     +  HP+  +
Sbjct: 201 --VFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  103 bits (259), Expect = 5e-25
 Identities = 58/186 (31%), Positives = 81/186 (43%), Gaps = 41/186 (22%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           C+E+L      HS   GI HRD+K  NIL     +   VKL DF  G   + +       
Sbjct: 104 CKELLKGLEYLHS--NGIIHRDIKAANILLTSDGE---VKLIDF--GLSAQLSD------ 150

Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            T    T VG+  +MAPE++N         YD + D+WSLG+    L  G PP+      
Sbjct: 151 -TKARNTMVGTPYWMAPEVING------KPYDYKADIWSLGITAIELAEGKPPYS----- 198

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
           +    +          LF     G       E    SDE KD +++ L K+  KR +A  
Sbjct: 199 ELPPMK---------ALFKIATNGPPGLRNPEKW--SDEFKDFLKKCLQKNPEKRPTAEQ 247

Query: 417 VLKHPW 422
           +LKHP+
Sbjct: 248 LLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  103 bits (260), Expect = 1e-24
 Identities = 60/196 (30%), Positives = 86/196 (43%), Gaps = 51/196 (26%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-------------GSGIKFNTSVHSPLAT 298
            GI +RDLKPENIL +H      + L DFDL                     S  + + +
Sbjct: 122 LGIVYRDLKPENIL-LHES--GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS 178

Query: 299 PLLLTP--------VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
                         VG+ E++APE+++        G+    D W+LG+++Y +L G  PF
Sbjct: 179 ETFSEEPSFRSNSFVGTEEYIAPEVISG------DGHGSAVDWWTLGILLYEMLYGTTPF 232

Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
                   G  R ET        F +I +    FP      +S  A+DLIR+LLVKD  K
Sbjct: 233 -------KGSNRDET--------FSNILKKEVTFPG-SP-PVSSSARDLIRKLLVKDPSK 275

Query: 411 RL----SAASVLKHPW 422
           RL     AA + +HP+
Sbjct: 276 RLGSKRGAAEIKQHPF 291

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  101 bits (254), Expect = 3e-24
 Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 61/218 (27%)

Query: 48  LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPN 107
           L+ +  +I GKG +  V    +  T  E A+K+I       + ++  E++    C+ HPN
Sbjct: 1   LFEILEKI-GKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK-HPN 58

Query: 108 IIQLLE-YYEDDE----------------------------------------NHERHKR 126
           I++    Y + DE                                         +     
Sbjct: 59  IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K  NIL     +   VKL DF  G   + +        T    T VG+  +MAP
Sbjct: 119 IIHRDIKAANILLTSDGE---VKLIDF--GLSAQLSD-------TKARNTMVGTPYWMAP 166

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           E++N         YD + D+WSLG+    L  G PP+ 
Sbjct: 167 EVING------KPYDYKADIWSLGITAIELAEGKPPYS 198

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  101 bits (253), Expect = 5e-24
 Identities = 62/276 (22%), Positives = 94/276 (34%), Gaps = 90/276 (32%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVK-IIDKLPGHSRSRVF-KEVETFHHCQGHPNII 109
           +GE+LG+G++ SV   ++  T    AVK +              +E+      Q HPNI+
Sbjct: 4   RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ-HPNIV 62

Query: 110 QLLEYYEDDENHERH--------------------------------------------- 124
           +   YY  + + E++                                             
Sbjct: 63  R---YYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             I HRD+K  NIL V  D +  VKL DF  G   +    +          +  G+  +M
Sbjct: 120 NGIVHRDIKGANIL-VDSDGV--VKLADF--GCAKR----LGDIETGEGTGSVRGTPYWM 170

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
           APE++          Y +  D+WSLG  V  +  G PP+    G                
Sbjct: 171 APEVIRG------EEYGRAADIWSLGCTVIEMATGKPPWS-ELGN------------PMA 211

Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF 280
            L+      I      PE I    P+ LS  +  DF
Sbjct: 212 ALYK-----IGSSGEPPE-I----PEHLSE-EAKDF 236

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 99.6 bits (249), Expect = 1e-23
 Identities = 59/173 (34%), Positives = 78/173 (45%), Gaps = 35/173 (20%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +QG+ HRD+K  NIL    D +  VKL DF +        +      +    + VG+  +
Sbjct: 117 EQGVIHRDIKAANIL-TTKDGV--VKLADFGV--------ATKLNDVSKDDASVVGTPYW 165

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      E SG     D+WSLG  V  LL G PP+Y                A  
Sbjct: 166 MAPEVI------EMSGASTASDIWSLGCTVIELLTGNPPYYD----------LNPMAA-- 207

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             LF  +Q  H   PEG    IS E KD + +   KD   R +A  +LKHPWI
Sbjct: 208 --LFRIVQDDHPPLPEG----ISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 99.6 bits (249), Expect = 1e-23
 Identities = 62/181 (34%), Positives = 83/181 (45%), Gaps = 40/181 (22%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            H+  +GI +RDLKPEN+L    D    VKL DF     +K               T  G
Sbjct: 109 LHN--RGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTW---------TFCG 154

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           + E++APEI+         GYD   D WSLG+++Y LL G PPF    GED      E  
Sbjct: 155 TPEYVAPEII------LNKGYDFSVDYWSLGILLYELLTGRPPF----GEDDEDPM-EI- 202

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
               +IL      G  +FP    + I   AKDLI++LL ++  +RL         + KH 
Sbjct: 203 --YNDIL---KGNGKLEFP----NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHK 253

Query: 422 W 422
           W
Sbjct: 254 W 254

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 99.7 bits (249), Expect = 2e-23
 Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 27/174 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             GI HRD+KP NI   H   +   KL DF     +K NT+         + +  G+  +
Sbjct: 117 SHGIVHRDIKPANIFLDHNGVI---KLGDFGCAVKLKNNTTT----MGEEVQSLAGTPAY 169

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+     G +  G+ +  D+WSLG VV  +  G  P          W   +      
Sbjct: 170 MAPEV---ITGGKGKGHGRAADIWSLGCVVLEMATGKRP----------WSELDNEFQ-- 214

Query: 371 EILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            I+FH +  GH    P+     +S E KD + R L  D +KR +A+ +L+HP++
Sbjct: 215 -IMFH-VGAGHKPPIPDSL--QLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 99.4 bits (248), Expect = 1e-22
 Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 65/212 (30%)

Query: 248 HSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVHSP---- 295
            SI + G  HRD+KP+N+L    D    +KL DF L +G+K       +    H+     
Sbjct: 115 DSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNF 171

Query: 296 ---LATP----------------LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
              ++ P                L  + VG+ +++APE+   F+    +GY+K CD WSL
Sbjct: 172 LDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEV---FL---QTGYNKECDWWSL 225

Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHA---CQEILFHSIQQGHYDFPEGEWSTIS 393
           GV++Y +L GYPPF   C ++      ET       +E L          FP+     +S
Sbjct: 226 GVIMYEMLVGYPPF---CSDN----PQETYRKIINWKETLQ---------FPDEV--PLS 267

Query: 394 DEAKDLIRRLLVKDARKRLSAASV--LK-HPW 422
            EAKDLI+RL   +A +RL    V  +K HP+
Sbjct: 268 PEAKDLIKRLCC-EAERRLGNNGVNEIKSHPF 298

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 97.8 bits (244), Expect = 3e-22
 Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 54/201 (26%)

Query: 248 HSI-QQGIAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGI--------KFNTSVHSP 295
            S+ + G  HRD+KP+NIL     H      +KL DF L   +          N S +  
Sbjct: 115 DSVHKLGFIHRDIKPDNILIDADGH------IKLADFGLCKKMNKAKDREYYLNDSHNLL 168

Query: 296 LATPLLL-------------TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYI 342
               +L+             + VG+ +++APE+     G   + Y   CD WSLGV++Y 
Sbjct: 169 FRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV---LRG---TPYGLECDWWSLGVILYE 222

Query: 343 LLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRR 402
           +L G+PPFY +          ET +   +I+     +    FP      +S EA DLI R
Sbjct: 223 MLYGFPPFYSD-------TLQETYN---KIINW---KESLRFPPDP--PVSPEAIDLICR 267

Query: 403 LLVKDARKRLSAAS-VLKHPW 422
           LL  D   RL +   +  HP+
Sbjct: 268 LLC-DPEDRLGSFEEIKSHPF 287

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 97.5 bits (241), Expect = 5e-22
 Identities = 56/232 (24%), Positives = 88/232 (37%), Gaps = 57/232 (24%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           YR+    LG+G++  V    +       A+K++ K          R  +E++        
Sbjct: 2   YRI-LRKLGEGSFGEVYLARDRK---LVALKVLAKKLESKSKEVERFLREIQILASLNHP 57

Query: 106 PNIIQLLEYYEDDEN-------------------------------------------HE 122
           PNI++L ++++D+ +                                           + 
Sbjct: 58  PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             K I HRD+KPENIL     ++  VKL DF  G          +     L  T VG+  
Sbjct: 118 HSKGIIHRDIKPENILLDRDGRV--VKLIDF--GLAKLLPDPGSTSSIPALPSTSVGTPG 173

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
           +MAPE+    +G   +      D+WSLG+ +Y LL G PPF G        Q
Sbjct: 174 YMAPEV---LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ 222

Length = 384

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 94.1 bits (234), Expect = 4e-21
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 27/178 (15%)

Query: 248 HSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           HS+ Q G  HRD+KPEN+L    D+   +KL DF  GS  +   +            PVG
Sbjct: 116 HSVHQMGYVHRDIKPENVLI---DRTGHIKLADF--GSAARLTANKMV-----NSKLPVG 165

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           + +++APE++    G     Y   CD WSLGV+ Y ++ G  PF            G + 
Sbjct: 166 TPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF----------HEGTSA 215

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
                I+     Q    FPE     +S +  DLI+ LL    ++RL    +  HP+ S
Sbjct: 216 KTYNNIMNF---QRFLKFPED--PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS 267

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 91.9 bits (229), Expect = 9e-21
 Identities = 58/214 (27%), Positives = 84/214 (39%), Gaps = 53/214 (24%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKII---DKLPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
           + KGAY  V       T   YA+K+I   D +  +   +V  E +     Q  P +++L 
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLY 59

Query: 112 ------------LEYYE--D-----------DENHER-------------HK-RIAHRDL 132
                       +EY    D           DE+  R             H   I HRDL
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119

Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
           KP+NIL    D    +KL DF L         ++           VG+ +++APE++   
Sbjct: 120 KPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG- 175

Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                 G+ K  D WSLG ++Y  L G PPF+G 
Sbjct: 176 -----QGHSKTVDWWSLGCILYEFLVGIPPFHGE 204

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 91.4 bits (228), Expect = 9e-21
 Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 41/178 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVG 306
           HS  + I HRD+KP+NI  +  + L  VKL DF    GI K  +S    LA     T VG
Sbjct: 120 HS--RKILHRDIKPQNIF-LTSNGL--VKLGDF----GISKVLSS-TVDLAK----TVVG 165

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +  +++PE+       +   Y+ + D+WSLG V+Y L     PF G              
Sbjct: 166 TPYYLSPELC------QNKPYNYKSDIWSLGCVLYELCTLKHPFEGE------------- 206

Query: 367 HACQEILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 L   I +G Y   P    S  S E ++L+  LL KD  +R S A +L+ P+I
Sbjct: 207 --NLLELALKILKGQYPPIP----SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 90.8 bits (226), Expect = 1e-20
 Identities = 53/178 (29%), Positives = 77/178 (43%), Gaps = 38/178 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS  +GI HRD+KP+NIL    D+   V + DF++ + +  +T         L  +  G+
Sbjct: 117 HS--KGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDT---------LTTSTSGT 162

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++         GY    D WSLGV  Y  L G  P+ G+        R     
Sbjct: 163 PGYMAPEVLCR------QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----- 211

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA--SVLKHPWI 423
                     +     +P   WST   EA D I +LL +D +KRL      +  HP+ 
Sbjct: 212 -------AKQETADVLYPAT-WST---EAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 91.0 bits (226), Expect = 4e-20
 Identities = 68/194 (35%), Positives = 89/194 (45%), Gaps = 46/194 (23%)

Query: 238 TCHACQEILF---HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVH 293
            C    EI     H  QQGI +RDLKPENIL    D    VKL DF L    I   T  H
Sbjct: 102 ACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVTH 158

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                    T  G+ E+MAPEI+        SG+ K  D WSLG ++Y +L G PPF   
Sbjct: 159 ---------TFCGTIEYMAPEIL------MRSGHGKAVDWWSLGALMYDMLTGAPPF--- 200

Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL- 412
             E+    R +T           I +G  + P      ++ EA+DL+++LL ++   RL 
Sbjct: 201 TAEN----RKKT--------IDKILKGKLNLP----PYLTPEARDLLKKLLKRNPSSRLG 244

Query: 413 ----SAASVLKHPW 422
                AA V  HP+
Sbjct: 245 AGPGDAAEVQSHPF 258

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 89.9 bits (224), Expect = 5e-20
 Identities = 55/228 (24%), Positives = 86/228 (37%), Gaps = 78/228 (34%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRVFKEV 96
            D   +K   LG G++  V    +  +   YA+KI+ K             +  R+ + +
Sbjct: 1   DDFEFIK--TLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI 58

Query: 97  ETFHHCQGHPNIIQLLEYYEDD--------------------------ENHER------- 123
                   HP ++ L   ++DD                          E   R       
Sbjct: 59  R-------HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVV 111

Query: 124 -------HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                     I +RDLKPEN+L    D    +K+ DF     +K  T            T
Sbjct: 112 LALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRTY-----------T 157

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
             G+ E++APEI+       + GY K  D W+LG+++Y +L GYPPF+
Sbjct: 158 LCGTPEYLAPEII------LSKGYGKAVDWWALGILIYEMLAGYPPFF 199

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 88.1 bits (219), Expect = 7e-20
 Identities = 55/174 (31%), Positives = 69/174 (39%), Gaps = 67/174 (38%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRDLKPENIL +  D    VKL DF L        S        LL T VG+
Sbjct: 109 HS--NGIIHRDLKPENIL-LDSDNGK-VKLADFGL--------SKLLTSDKSLLKTIVGT 156

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++          Y ++ D+WSLGV++Y L                        
Sbjct: 157 PAYMAPEVLL-----GKGYYSEKSDIWSLGVILYEL------------------------ 187

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                                      E KDLIR++L KD  KR SA  +L+H 
Sbjct: 188 --------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 90.2 bits (224), Expect = 9e-20
 Identities = 42/104 (40%), Positives = 53/104 (50%), Gaps = 20/104 (19%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
             HRDLKPEN L    D    +KL DF L  GI   T  +S          VGS ++MAP
Sbjct: 122 YIHRDLKPENFLI---DASGHIKLTDFGLSKGIV--TYANSV---------VGSPDYMAP 167

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E++         GYD   D WSLG ++Y  LCG+PPF G+   +
Sbjct: 168 EVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE 205

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 89.5 bits (222), Expect = 1e-19
 Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 32/180 (17%)

Query: 248 HSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTP 304
            S+ Q G  HRD+KP+N+L    D+   ++L DF  GS ++     +V S +A       
Sbjct: 116 DSVHQLGYVHRDIKPDNVLL---DKNGHIRLADF--GSCLRLLADGTVQSNVA------- 163

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
           VG+ ++++PEI+ A M      Y   CD WSLGV +Y +L G  PFY             
Sbjct: 164 VGTPDYISPEILQA-MEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE----------S 212

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPW 422
                 +I+ H   + H+ FP    + +S+EAKDLIRRL+     +  R        HP+
Sbjct: 213 LVETYGKIMNH---KEHFQFPPDV-TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 86.3 bits (214), Expect = 9e-19
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 48/184 (26%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS  + I +RDLKPENIL    D+   +KL DF     ++  T            T  G+
Sbjct: 118 HS--KEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRT-----------WTLCGT 161

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            E++APE++      ++ G++K  D W+LG+++Y +L GYPPF+ +              
Sbjct: 162 PEYLAPEVI------QSKGHNKAVDWWALGILIYEMLVGYPPFFDD----------NPFG 205

Query: 368 ACQEILFHSIQ-QGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
             ++IL   ++   H D            AKDLI++LLV D  +RL      A  V  H 
Sbjct: 206 IYEKILAGKLEFPRHLDL----------YAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255

Query: 422 WIST 425
           W  +
Sbjct: 256 WFKS 259

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 87.0 bits (216), Expect = 1e-18
 Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 84/243 (34%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS-----RVFKEVETFHHCQGHP 106
             +++G+GA+  V    +  T   YA+K++ K     R+     R  +++         P
Sbjct: 5   VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS---P 61

Query: 107 NIIQLLEYYEDDEN---------------------------------------HERHK-R 126
            I++L   ++D+E+                                          HK  
Sbjct: 62  WIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG 121

Query: 127 IAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGI--------KFNTSVHSPLATPLLL 175
             HRD+KP+NIL     H      +KL DF L   +          N S +      +L+
Sbjct: 122 FIHRDIKPDNILIDADGH------IKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV 175

Query: 176 -------------TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
                        + VG+ +++APE+     G   + Y   CD WSLGV++Y +L G+PP
Sbjct: 176 RRRDHKQRRVRANSTVGTPDYIAPEV---LRG---TPYGLECDWWSLGVILYEMLYGFPP 229

Query: 223 FYG 225
           FY 
Sbjct: 230 FYS 232

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 58/215 (26%), Positives = 80/215 (37%), Gaps = 70/215 (32%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDK-------LPGHSRSRVFKEVETFHHCQGHPNI 108
           LG G +  V+          +A+K + K          H    +F E E    C  HP I
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEH----IFSEKEILEECN-HPFI 55

Query: 109 IQLLEYYEDDEN-----------------HER----------------------HKR-IA 128
           ++L   ++D +                   +R                      H R I 
Sbjct: 56  VKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGII 115

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           +RDLKPEN+L    D    VKL DF     +K               T  G+ E++APEI
Sbjct: 116 YRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTW---------TFCGTPEYVAPEI 163

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +         GYD   D WSLG+++Y LL G PPF
Sbjct: 164 I------LNKGYDFSVDYWSLGILLYELLTGRPPF 192

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 59/227 (25%), Positives = 84/227 (37%), Gaps = 71/227 (31%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHP 106
           Y +  +I GKG++  V           Y +K ID   +    R     EV+       HP
Sbjct: 2   YEIIKQI-GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN-HP 59

Query: 107 NIIQLLEYYEDDEN---------------------------------------------- 120
           NII+  E +E+                                                 
Sbjct: 60  NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL 119

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVG 179
           H R   I HRD+KP+NI  +  + L  VKL DF    GI K  +S    LA     T VG
Sbjct: 120 HSRK--ILHRDIKPQNIF-LTSNGL--VKLGDF----GISKVLSS-TVDLAK----TVVG 165

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +  +++PE+       +   Y+ + D+WSLG V+Y L     PF G 
Sbjct: 166 TPYYLSPELC------QNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 85.6 bits (212), Expect = 2e-18
 Identities = 60/185 (32%), Positives = 82/185 (44%), Gaps = 48/185 (25%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP------ 304
           Q GI +RD+K ENIL    D    V L DF L               +   L        
Sbjct: 123 QLGIIYRDIKLENILL---DSEGHVVLTDFGL---------------SKEFLAEEEERAY 164

Query: 305 --VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 362
              G+ E+MAPE++    G    G+DK  D WSLGV+ + LL G  PF  +  ++     
Sbjct: 165 SFCGTIEYMAPEVIR---GGS-GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN----- 215

Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA--ASVLK- 419
                  Q  +   I +    FP     T+S EA+D I++LL KD +KRL A  A  +K 
Sbjct: 216 ------SQSEISRRILKSKPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265

Query: 420 HPWIS 424
           HP+  
Sbjct: 266 HPFFQ 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 86.1 bits (213), Expect = 2e-18
 Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 40/212 (18%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  +  I +RDLKPENIL    D    + LCDF L    K N +           T  
Sbjct: 109 LEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLS---KANLT-----DNKTTNTFC 157

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E++APE++      +  GY K  D WSLGV+V+ + CG+ PFY    ED        
Sbjct: 158 GTTEYLAPEVL-----LDEKGYTKHVDFWSLGVLVFEMCCGWSPFY---AED-------- 201

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA---ASVLK-HP 421
               Q+ ++ +I  G   FP+     +SDE +  ++ LL ++ + RL A   A  LK HP
Sbjct: 202 ---TQQ-MYRNIAFGKVRFPKN---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP 254

Query: 422 WISTAG--TAHRPLVTPQVIRRNQSARELSSF 451
           + +        +  +TP       S  ++S+F
Sbjct: 255 FFADIDWDLLSKKQITPPFKPIVDSDEDVSNF 286

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 84.2 bits (209), Expect = 4e-18
 Identities = 55/182 (30%), Positives = 79/182 (43%), Gaps = 40/182 (21%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           ++G  HRD+K  NIL      LS    VKL DF +   +    S  +        T VG+
Sbjct: 116 EEGKIHRDIKAANIL------LSEEGDVKLADFGVSGQLTSTMSKRN--------TFVGT 161

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++      + SGYD++ D+WSLG+    L  G PP                 H
Sbjct: 162 PFWMAPEVI------KQSGYDEKADIWSLGITAIELAKGEPPL-------------SDLH 202

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
               +LF   +    + P  E +  S   KD +   L KD ++R SA  +LKH +I  A 
Sbjct: 203 P-MRVLFLIPKN---NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK 258

Query: 428 TA 429
             
Sbjct: 259 KT 260

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 85.1 bits (210), Expect = 6e-18
 Identities = 71/237 (29%), Positives = 103/237 (43%), Gaps = 58/237 (24%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVHSPLAT----- 298
           Q G  HRD+KP+N+L    D    VKL DF L +G+K       +    H+P +      
Sbjct: 119 QLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN 175

Query: 299 ---------------PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL 343
                           L  + VG+ +++APE+   FM    +GY+K CD WSLGV++Y +
Sbjct: 176 MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEV---FM---QTGYNKLCDWWSLGVIMYEM 229

Query: 344 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
           L GYPPF   C E       +  +  + ++F          PE     IS++AKDLI R 
Sbjct: 230 LIGYPPF---CSETPQETYRKVMNWKETLVFP---------PE---VPISEKAKDLILRF 274

Query: 404 LVKDARKRLSAASVLK---HPWISTAGTAH---RPLVTPQVIRRNQSARELSSFAES 454
              D+  R+ +  V +   HP+       H   RP   P  I+          F ES
Sbjct: 275 CT-DSENRIGSNGVEEIKSHPFFEGVDWGHIRERPAAIPIEIKSIDDTSNFDEFPES 330

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 84.1 bits (208), Expect = 9e-18
 Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 53/212 (25%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKEVETFHHCQGHPNIIQL- 111
           ++G+G +  VQ      T   YA+K++ K    ++  V  F+E          P I QL 
Sbjct: 8   LVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQ 67

Query: 112 ------------LEY------------YED--DEN-------------HERHKR-IAHRD 131
                       +EY            YED  DE+             H  H+    HRD
Sbjct: 68  YAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRD 127

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           +KPEN+L    D+   +KL DF  GS  +   +            PVG+ +++APE++  
Sbjct: 128 IKPENVLI---DRTGHIKLADF--GSAARLTANKMV-----NSKLPVGTPDYIAPEVLTT 177

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             G     Y   CD WSLGV+ Y ++ G  PF
Sbjct: 178 MNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 84.1 bits (208), Expect = 9e-18
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 45/184 (24%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVG 306
           HS    + +RDLK EN++    D+   +K+ DF L   GI    ++ +   TP       
Sbjct: 112 HS--CDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP------- 159

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
             E++APE++      E + Y +  D W LGVV+Y ++CG  PFY    +D         
Sbjct: 160 --EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQD--------- 199

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
               E LF  I      FP     T+S EAK L+  LL KD ++RL      A  +++H 
Sbjct: 200 ---HEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR 252

Query: 422 WIST 425
           + ++
Sbjct: 253 FFAS 256

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 82.5 bits (204), Expect = 1e-17
 Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 40/175 (22%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +   HRD+K  NIL    D    VKL DF +   +   +   S           GS  +M
Sbjct: 121 RNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFSFAKSF---------KGSPYWM 168

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE++      +  GY    D+WSLG  V  +  G PP+                   + 
Sbjct: 169 APEVIA-----QQGGYGLAADIWSLGCTVLEMATGKPPW----------------SQLEG 207

Query: 372 I--LFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +  +F   +       P+     +SDEAKD I + L +D   R +AA +L+HP++
Sbjct: 208 VAAVFKIGRSKELPPIPD----HLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 82.9 bits (205), Expect = 2e-17
 Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 35/180 (19%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSV----HSPLATPLLLTP--V 305
           GI HRDLKP+N+L      +  +KL DF L   G+   T+     H    T   L     
Sbjct: 121 GIVHRDLKPDNLLIT---SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC 177

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E++APE++         GY K  D W++G+++Y  L G  PF+G+  E+        
Sbjct: 178 GTPEYIAPEVI------LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-------- 223

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
                  LF  +     ++PEG+   +  +A+DLI RLL ++  +RL    A  V +H +
Sbjct: 224 -------LFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF 275

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 82.6 bits (204), Expect = 3e-17
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 44/179 (24%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            I +RDLKPEN+L    D    VK+ DF     +   T            T  G+ E++A
Sbjct: 138 DIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRT-----------FTLCGTPEYLA 183

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++      ++ G+ K  D W++GV++Y  + GYPPF+    +D  ++           
Sbjct: 184 PEVI------QSKGHGKAVDWWTMGVLLYEFIAGYPPFF----DDTPFR----------- 222

Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTA 426
           ++  I  G   FP   W      A+DL++ LL  D  KRL       A V  HP+   A
Sbjct: 223 IYEKILAGRLKFP--NW--FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277

Length = 329

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 80.8 bits (200), Expect = 4e-17
 Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 64/218 (29%)

Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNI 108
             G+++G+GA+  V   +N+ T    A+K I   K+   +   + +E++   + + HPNI
Sbjct: 3   QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK-HPNI 61

Query: 109 IQLLEYYEDDEN------------------------------------------HERHKR 126
           ++ +   E  ++                                          HE  + 
Sbjct: 62  VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHE--QG 119

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRD+K  NIL    D +  VKL DF +        +      +    + VG+  +MAP
Sbjct: 120 VIHRDIKAANIL-TTKDGV--VKLADFGV--------ATKLNDVSKDDASVVGTPYWMAP 168

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           E++      E SG     D+WSLG  V  LL G PP+Y
Sbjct: 169 EVI------EMSGASTASDIWSLGCTVIELLTGNPPYY 200

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 80.8 bits (200), Expect = 6e-17
 Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 38/189 (20%)

Query: 237 ETCHACQEILFHSIQQG-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +   A  E    S     + HRDLKP NI     D  + VKL DF L   +  ++S    
Sbjct: 113 QLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFGLAKILGHDSSFAK- 168

Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                  T VG+  +M+PE +N         YD++ D+WSLG ++Y L    PPF     
Sbjct: 169 -------TYVGTPYYMSPEQLNH------MSYDEKSDIWSLGCLIYELCALSPPFTA--- 212

Query: 356 EDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
                         Q  L   I++G +   P       S E  ++I+ +L  D  KR S 
Sbjct: 213 ------------RNQLQLASKIKEGKFRRIPYR----YSSELNEVIKSMLNVDPDKRPST 256

Query: 415 ASVLKHPWI 423
             +L+ P I
Sbjct: 257 EELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 80.3 bits (199), Expect = 9e-17
 Identities = 59/200 (29%), Positives = 82/200 (41%), Gaps = 56/200 (28%)

Query: 242 CQEILF-----HSIQQGIAHRDLKPENILCVHPDQLS---PVKLCDF----DLGSGIKFN 289
           C+E+L      HS  Q + HRD+K +NIL      LS    VKL DF     L       
Sbjct: 122 CREVLQGLEYLHS--QNVIHRDIKSDNIL------LSKDGSVKLADFGFAAQLTKEKSKR 173

Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
            SV            VG+  +MAPE++      +   Y  + D+WSLG++   +  G PP
Sbjct: 174 NSV------------VGTPYWMAPEVI------KRKDYGPKVDIWSLGIMCIEMAEGEPP 215

Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
           +                      LF    +G       E W   S E KD + + LVKD 
Sbjct: 216 YLREPPL--------------RALFLITTKGIPPLKNPEKW---SPEFKDFLNKCLVKDP 258

Query: 409 RKRLSAASVLKHPWISTAGT 428
            KR SA  +L+HP++  A  
Sbjct: 259 EKRPSAEELLQHPFLKKACP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 79.4 bits (196), Expect = 2e-16
 Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 62/225 (27%)

Query: 48  LYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-KLPGHSRSRVFKEVETFHHCQGH- 105
           LY+ + E++G+GAY +V    ++ T    A+KII+   P    S + +EV      +   
Sbjct: 2   LYQ-RLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQ 60

Query: 106 -PNIIQ-------------LLEYYED------------DENHER-------------HKR 126
            PNI +             ++EY E              E +               HK 
Sbjct: 61  PPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV 120

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            + HRD+K  NIL  +      VKLCDF + + +  N+S  S        T VG+  +MA
Sbjct: 121 GVIHRDIKAANILVTNTGN---VKLCDFGVAALLNQNSSKRS--------TFVGTPYWMA 169

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           PE++      E   YD + D+WSLG+ +Y +  G PP+      D
Sbjct: 170 PEVIT-----EGKYYDTKADIWSLGITIYEMATGNPPY---SDVD 206

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 31/170 (18%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP N+L     +   VK+ DF +   ++      +        T VG+  +M+P
Sbjct: 121 IIHRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCN--------TFVGTVTYMSP 169

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +      E+  Y    D+WSLG+ +     G  PF    G+   ++        Q I 
Sbjct: 170 ERIQ----GESYSYA--ADIWSLGLTLLECALGKFPFLPP-GQPSFFE------LMQAIC 216

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                      P  E+S    E +D I   L KD +KR SAA +L+HP+I
Sbjct: 217 DGPP----PSLPAEEFS---PEFRDFISACLQKDPKKRPSAAELLQHPFI 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 80.1 bits (198), Expect = 2e-16
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 51/186 (27%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-----GSGIKFNTSVHSPLATPL 300
           L    ++GI +RDLK +N+L    D    +K+ DF +       G+  +T   +P     
Sbjct: 109 LQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFCGTP----- 160

Query: 301 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW 360
                   +++APEI+          Y    D W+LGV++Y +L G  PF    G+D   
Sbjct: 161 --------DYIAPEIL------SYQPYGPAVDWWALGVLLYEMLAGQSPFE---GDD--- 200

Query: 361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----A 415
                    ++ LF SI +    +P      +S EAK +++  L K+  KRL        
Sbjct: 201 ---------EDELFQSILEDEVRYPRW----LSKEAKSILKSFLTKNPEKRLGCLPTGEQ 247

Query: 416 SVLKHP 421
            +  HP
Sbjct: 248 DIKGHP 253

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 78.6 bits (194), Expect = 3e-16
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 35/174 (20%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           G+ HRD+K  NIL  +      VKLCDF + + +  N+S  S        T VG+  +MA
Sbjct: 121 GVIHRDIKAANILVTNTGN---VKLCDFGVAALLNQNSSKRS--------TFVGTPYWMA 169

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++      E   YD + D+WSLG+ +Y +  G PP+                      
Sbjct: 170 PEVIT-----EGKYYDTKADIWSLGITIYEMATGNPPY------------------SDVD 206

Query: 373 LFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
            F ++        P  E +  S   ++ +   L ++ ++RLSA  +LK  WI  
Sbjct: 207 AFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 79.2 bits (195), Expect = 3e-16
 Identities = 58/175 (33%), Positives = 79/175 (45%), Gaps = 41/175 (23%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + +RDLKPENIL    D    + LCDF L    K N             T  G+ E++AP
Sbjct: 114 VIYRDLKPENILL---DYQGHIALCDFGL---CKLNMK-----DDDKTNTFCGTPEYLAP 162

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG-NCGEDCGWQRGETCHACQEI 372
           E++         GY K  D W+LGV++Y +L G PPFY  N  E                
Sbjct: 163 ELLLGH------GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE---------------- 200

Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPWIS 424
           ++  I Q    FP+G       +AKDL+  LL +D  +RL    A  +  HP+ S
Sbjct: 201 MYRKILQEPLRFPDG----FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFS 251

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 78.1 bits (193), Expect = 4e-16
 Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 31/173 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRD+KP NIL     Q   +KLCDF           V   L   L  T VG++ +
Sbjct: 119 KHKIIHRDVKPSNILVNSRGQ---IKLCDF----------GVSGQLVNSLAKTFVGTSSY 165

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE +        + Y  + D+WSLG+ +  L  G  P+             +      
Sbjct: 166 MAPERIQ------GNDYSVKSDIWSLGLSLIELATGRFPY---------PPENDPPDGIF 210

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           E+L + + +     P G++   S + +D +   L+KD R+R S   +L+HP+I
Sbjct: 211 ELLQYIVNEPPPRLPSGKF---SPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 57/216 (26%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVETFHHCQGHPNII 109
           +G  +G G +  V T VN+ T    AVK I       ++   +  E++     + HPN++
Sbjct: 4   RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK-HPNLV 62

Query: 110 -------------------------QLLEY-YEDDEN----------------HERHKRI 127
                                    +LLE+    DE+                H     I
Sbjct: 63  KYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHS--HGI 120

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRD+KP NI   H   +   KL DF     +K NT+         + +  G+  +MAPE
Sbjct: 121 VHRDIKPANIFLDHNGVI---KLGDFGCAVKLKNNTTT----MGEEVQSLAGTPAYMAPE 173

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +     G +  G+ +  D+WSLG VV  +  G  P+
Sbjct: 174 V---ITGGKGKGHGRAADIWSLGCVVLEMATGKRPW 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 35/194 (18%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    + HRDLKP NIL    +    VKL DF L   +   + +      P+L   V +
Sbjct: 124 HS--GNVIHRDLKPSNILL---NSDCRVKLADFGLARSL---SELEENPENPVLTDYVAT 175

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN------------CG 355
             + APEI+       ++ Y K  D+WS+G ++  +L G P F G              G
Sbjct: 176 RWYRAPEILLG-----STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230

Query: 356 ----EDCGWQRGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
               ED      E+  +     +  S+        +      SD+A DL+++LLV +  K
Sbjct: 231 PPSAEDI-----ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNK 285

Query: 411 RLSAASVLKHPWIS 424
           RL+A   L+HP+++
Sbjct: 286 RLTAEEALEHPYVA 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 66/221 (29%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS--RSRVFKEVETFHHCQG 104
           DL R+K  +LG+G+   V    +  T   YA+K I  + G    R ++ +E++T   C+ 
Sbjct: 2   DLERVK--VLGQGSSGVVYKVRHKPTGKIYALKKI-HVDGDEEFRKQLLRELKTLRSCE- 57

Query: 105 HPNIIQL-------------LEYYE----DD---------EN----------------HE 122
            P +++              LEY +     D         E                 H 
Sbjct: 58  SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT 117

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           +   I HRD+KP N+L     +   VK+ DF +   ++      +        T VG+  
Sbjct: 118 KRHII-HRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCN--------TFVGTVT 165

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +M+PE +      E+  Y    D+WSLG+ +     G  PF
Sbjct: 166 YMSPERIQ----GESYSYA--ADIWSLGLTLLECALGKFPF 200

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 76.4 bits (189), Expect = 2e-15
 Identities = 89/409 (21%), Positives = 132/409 (32%), Gaps = 166/409 (40%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII------DKLPGHS-RSRVFKEVETFHHCQG 104
           K E LG+G Y  V    +  T    A+K I      + +P  + R     E+      + 
Sbjct: 3   KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR-----EISLLKELK- 56

Query: 105 HPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNT 163
           HPNI++LL+                              +L  V + CD DL   +    
Sbjct: 57  HPNIVKLLDV------------------------IHTERKLYLVFEYCDMDLKKYLDKRP 92

Query: 164 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG--YP 221
                               ++P ++ + M                    Y LL G  Y 
Sbjct: 93  GP------------------LSPNLIKSIM--------------------YQLLRGLAY- 113

Query: 222 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
                            CH             I HRDLKP+NIL ++ D +  +KL DF 
Sbjct: 114 -----------------CH----------SHRILHRDLKPQNIL-INRDGV--LKLADFG 143

Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSL 336
           L        +   PL T    T     E +     APEI    +G  +  Y    D+WS+
Sbjct: 144 LA------RAFGIPLRT---YTH----EVVTLWYRAPEI---LLG--SKHYSTAVDIWSV 185

Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ-----EIL----------FHSIQQGH 381
           G +   ++ G P F G+   D            Q     +IL             +    
Sbjct: 186 GCIFAEMITGKPLFPGDSEID------------QLFKIFQILGTPTEESWPGVTKLPDYK 233

Query: 382 YDFP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             FP       E     +  E  DL+ ++L  +  KR+SA   LKHP+ 
Sbjct: 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 57/166 (34%), Positives = 83/166 (50%), Gaps = 30/166 (18%)

Query: 248 HSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTP 304
           HSI Q    HRD+KP+N+L    D    ++L DF  GS +K N   +V S +A       
Sbjct: 116 HSIHQLHYVHRDIKPDNVLL---DMNGHIRLADF--GSCLKMNQDGTVQSSVA------- 163

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
           VG+ ++++PEI+ A M      Y   CD WSLGV +Y +L G  PFY             
Sbjct: 164 VGTPDYISPEILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE----------S 212

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
                 +I+ H   +  + FP    + +S+EAKDLI+RL+    R+
Sbjct: 213 LVETYGKIMNH---EERFQFPS-HITDVSEEAKDLIQRLICSRERR 254

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 75.2 bits (185), Expect = 3e-15
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 39/171 (22%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           Q I HRDLK  NIL V  D    VK+ D  +   +K N          +  T +G+  +M
Sbjct: 122 QKILHRDLKSANILLVANDL---VKIGDLGISKVLKKN----------MAKTQIGTPHYM 168

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+       +   Y  + D+WSLG ++Y +    PPF     +D              
Sbjct: 169 APEVW------KGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-------------- 208

Query: 372 ILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
            L + +Q+G Y   P       S + ++ IR +L    + R +   +L  P
Sbjct: 209 -LRYKVQRGKYPPIP----PIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 61/225 (27%), Positives = 85/225 (37%), Gaps = 72/225 (32%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS--RSRVFKEVETFHHCQ 103
            DL  L    LG G    V   ++  T    AVK I +L  +   + ++ +E++  H C 
Sbjct: 1   DDLEYLG--ELGAGNSGVVSKVLHRPTGKIMAVKTI-RLEINEAIQKQILRELDILHKCN 57

Query: 104 GHPNIIQ-------------LLEYY-----------------ED-------------DEN 120
             P I+               +EY                  E                 
Sbjct: 58  -SPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYL 116

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           HE+HK I HRD+KP NIL     Q   +KLCDF           V   L   L  T VG+
Sbjct: 117 HEKHK-IIHRDVKPSNILVNSRGQ---IKLCDF----------GVSGQLVNSLAKTFVGT 162

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPP 222
           + +MAPE +        + Y  + D+WSLG+ +  L  G   YPP
Sbjct: 163 SSYMAPERIQ------GNDYSVKSDIWSLGLSLIELATGRFPYPP 201

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 76.4 bits (188), Expect = 6e-15
 Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 71/214 (33%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG--------------------------- 285
           G  HRD+KP+NIL    D+   +KL DF L +G                           
Sbjct: 121 GFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRN 177

Query: 286 ------IKFNTSVHSPLAT------PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 333
                 I    S    +AT       +  + VG+ +++APEI   F+     GY + CD 
Sbjct: 178 SVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEI---FLQ---QGYGQECDW 231

Query: 334 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF--HSIQQGHYDFPEGEWST 391
           WSLG +++  L G+PPF   C E+      ET    ++I+    ++      FP+     
Sbjct: 232 WSLGAIMFECLIGWPPF---CSENS----HET---YRKIINWRETLY-----FPDD--IH 274

Query: 392 ISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
           +S EA+DLIRRL+  +A  RL    A  +  HP+
Sbjct: 275 LSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF 307

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 75.9 bits (187), Expect = 7e-15
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 49/151 (32%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVHSP-------LATP-- 172
           HRD+KP+N+L    D    +KL DF L +G+K       +    H+        ++ P  
Sbjct: 124 HRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS 180

Query: 173 --------------LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
                         L  + VG+ +++APE+   F+    +GY+K CD WSLGV++Y +L 
Sbjct: 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEV---FL---QTGYNKECDWWSLGVIMYEMLV 234

Query: 219 GYPPFYGNCGEDCGWQRGETCHA---CQEIL 246
           GYPPF   C ++      ET       +E L
Sbjct: 235 GYPPF---CSDN----PQETYRKIINWKETL 258

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 74.6 bits (184), Expect = 8e-15
 Identities = 50/219 (22%), Positives = 79/219 (36%), Gaps = 74/219 (33%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
           E +G+GA   V    +  T  E A+K + +L   ++  +  E+     C+ HPNI+   +
Sbjct: 25  EKIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCK-HPNIVDYYD 82

Query: 114 YYEDD-------------------ENH-----ERH-----------------KRIAHRDL 132
            Y                        +     E                   + + HRD+
Sbjct: 83  SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDI 142

Query: 133 KPENILCVHPDQLS---PVKLCDF----DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           K +NIL      LS    VKL DF     L        SV            VG+  +MA
Sbjct: 143 KSDNIL------LSKDGSVKLADFGFAAQLTKEKSKRNSV------------VGTPYWMA 184

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           PE++      +   Y  + D+WSLG++   +  G PP+ 
Sbjct: 185 PEVI------KRKDYGPKVDIWSLGIMCIEMAEGEPPYL 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 74.1 bits (182), Expect = 1e-14
 Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 22/104 (21%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           H+R I HRD+KPEN+L    DQ   +KL DF L      N               VG+ +
Sbjct: 114 HQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLENKKF------------VGTPD 158

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           ++APE +         G DK  D WSLG V++  L GYPPF+  
Sbjct: 159 YLAPETILG------VGDDKMSDWWSLGCVIFEFLFGYPPFHAE 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 66/217 (30%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
           ++GKGA+  V       T+  +A+K ++K   +   S   V  E         HP ++ L
Sbjct: 7   VIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNL 65

Query: 112 LEYYEDDEN------------------------------------------HERHKRIAH 129
              ++D+EN                                          H   K I H
Sbjct: 66  WYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHS--KGIIH 123

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
           RD+KP+NIL    D+   V + DF++ + +  +T         L  +  G+  +MAPE++
Sbjct: 124 RDIKPDNILL---DEQGHVHITDFNIATKVTPDT---------LTTSTSGTPGYMAPEVL 171

Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                    GY    D WSLGV  Y  L G  P+ G+
Sbjct: 172 CR------QGYSVAVDWWSLGVTAYECLRGKRPYRGH 202

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 74.3 bits (182), Expect = 1e-14
 Identities = 60/182 (32%), Positives = 88/182 (48%), Gaps = 34/182 (18%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  + GI +RD+K ENIL    D    V L DF L    +F+             +  
Sbjct: 118 LEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSK--EFHED-----EVERAYSFC 167

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E+MAP+IV    G +  G+DK  D WS+GV++Y LL G  PF  +  ++        
Sbjct: 168 GTIEYMAPDIVR---GGD-GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-------- 215

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
               Q  +   I +    +P+     +S  AKD+I+RLL+KD +KRL      A  + KH
Sbjct: 216 ---SQAEISRRILKSEPPYPQ----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268

Query: 421 PW 422
           P+
Sbjct: 269 PF 270

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 55/191 (28%), Positives = 78/191 (40%), Gaps = 41/191 (21%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAE 309
             GI HRDLKPEN+L      L   KL DF L        S  SP       T  V +  
Sbjct: 116 SHGILHRDLKPENLLINTEGVL---KLADFGLAR------SFGSP---VRPYTHYVVTRW 163

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH-- 367
           + APE++   +G    GY    D+WS+G +   LL   P F G    D      +     
Sbjct: 164 YRAPELL---LG--DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID------QLFKIF 212

Query: 368 -----ACQEIL--FHSIQQGHY-DFPEGEWSTI-------SDEAKDLIRRLLVKDARKRL 412
                   E+   F S+ + +   FP+     +       S +A DL+ ++L  D  KR+
Sbjct: 213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI 272

Query: 413 SAASVLKHPWI 423
           +A   L HP+ 
Sbjct: 273 TAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 31/174 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G+ HRD+KP NIL    D    VKLCDF + SG   ++   +  A        G A +
Sbjct: 133 KHGVIHRDVKPSNILL---DASGNVKLCDFGI-SGRLVDSKAKTRSA--------GCAAY 180

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCGWQRGETCHAC 369
           MAPE ++         YD R D+WSLG+ +  L  G +P  Y NC  +            
Sbjct: 181 MAPERIDP--PDPNPKYDIRADVWSLGISLVELATGQFP--YKNCKTEF----------- 225

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            E+L   +Q+     P  E    S +    +   L KD RKR     +L+HP+I
Sbjct: 226 -EVLTKILQEEPPSLPPNE--GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 60/230 (26%), Positives = 93/230 (40%), Gaps = 80/230 (34%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG----------HSRSRVFKE 95
            DL R+K   +G G +  V    + ++E  YA+K++  +P           H+  RV KE
Sbjct: 1   DDLERIK--TVGTGTFGRVHLVRDRISEHYYALKVM-AIPEVIRLKQEQHVHNEKRVLKE 57

Query: 96  VETFHHCQGHPNIIQLLEYYEDDEN----------------------------------- 120
           V        HP II+L     D                                      
Sbjct: 58  VS-------HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEI 110

Query: 121 -----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                +   K I +RDLKPENIL    D+   +KL DF     ++  T            
Sbjct: 111 VCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRT-----------W 156

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           T  G+ E++APE++      ++ G++K  D W+LG+++Y +L GYPPF+ 
Sbjct: 157 TLCGTPEYLAPEVI------QSKGHNKAVDWWALGILIYEMLVGYPPFFD 200

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 73.3 bits (180), Expect = 2e-14
 Identities = 60/203 (29%), Positives = 82/203 (40%), Gaps = 45/203 (22%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  Q+ I +RDLKPEN+L    D    V++ D  L   +K    +     TP      
Sbjct: 108 LEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAGTP------ 158

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
               +MAPE++    G     YD   D ++LG  +Y ++ G  PF          QR E 
Sbjct: 159 ---GYMAPEVL---QGEV---YDFSVDWFALGCTLYEMIAGRSPFR---------QRKEK 200

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
               +E L     +   ++P+      S EAKDL   LL KD  KRL     SA  V +H
Sbjct: 201 VE--KEELKRRTLEMAVEYPD----KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254

Query: 421 PWIST-------AGTAHRPLVTP 436
           P           AG    P +  
Sbjct: 255 PLFKDLNWRRLEAGMLEPPFIPD 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 74.3 bits (182), Expect = 2e-14
 Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 52/194 (26%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK----------FNTSVHSPLA--- 297
           Q G  HRD+KP+N+L    D    VKL DF L +G+K           N S+ S      
Sbjct: 119 QLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQN 175

Query: 298 --------------TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL 343
                           L  + VG+ +++APE+   FM    +GY+K CD WSLGV++Y +
Sbjct: 176 MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEV---FM---QTGYNKLCDWWSLGVIMYEM 229

Query: 344 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
           L GYPPF   C E       +  +  + ++F          PE     IS++AKDLI R 
Sbjct: 230 LIGYPPF---CSETPQETYKKVMNWKETLIFP---------PE---VPISEKAKDLILRF 274

Query: 404 LVKDARKRLSAASV 417
              +   R+ A  V
Sbjct: 275 CC-EWEHRIGAPGV 287

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 73.0 bits (179), Expect = 3e-14
 Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 36/188 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRD+KP N+L     Q   VKLCDF           V   L   L  T +G   +
Sbjct: 121 EHNIIHRDVKPTNVLVNGNGQ---VKLCDF----------GVSGNLVASLAKTNIGCQSY 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPP-FYGNCGEDCGWQRGETC 366
           MAPE + +    +   Y  + D+WSLG+ +  +  G   YPP  Y N             
Sbjct: 168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN------------- 214

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
                 +F  +       P    S  SD+A+D + + L K   +R + A +L+HPW+   
Sbjct: 215 ------IFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268

Query: 427 GTAHRPLV 434
             A   + 
Sbjct: 269 KNADVDMA 276

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 73.4 bits (180), Expect = 3e-14
 Identities = 69/219 (31%), Positives = 97/219 (44%), Gaps = 45/219 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  + GI +RD+K ENIL    D    V L DF L    +F +            +  
Sbjct: 118 LEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSK--EFLSE-----EKERTYSFC 167

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E+MAPEI+         G+ K  D WSLG++++ LL G  PF    GE     R   
Sbjct: 168 GTIEYMAPEIIRG-----KGGHGKAVDWWSLGILIFELLTGASPFTLE-GE-----RNTQ 216

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA-----SVLKH 420
               + IL     +    FP    S I  EA+DL+ +LL KD +KRL A       + +H
Sbjct: 217 SEVSRRIL-----KCDPPFP----SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267

Query: 421 P------WISTAGTAHRPLVTPQVIRRNQSARELSSFAE 453
           P      W + A     P   P +  RN+   ++ +FAE
Sbjct: 268 PFFKGLDWEALALRKVNPPFRPSI--RNEL--DVGNFAE 302

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 73.3 bits (180), Expect = 4e-14
 Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 43/183 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS+  GI +RDLKPENIL    D+   +KL DF L        S+          +  G+
Sbjct: 115 HSL--GIIYRDLKPENILL---DEEGHIKLTDFGLS-----KESIDHEKKA---YSFCGT 161

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            E+MAPE+VN        G+ +  D WS GV+++ +L G  PF G         R ET  
Sbjct: 162 VEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQGK-------DRKET-- 206

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA-----SVLKHPW 422
                    I +     P+     +S EA+ L+R L  ++   RL A       + +HP+
Sbjct: 207 ------MTMILKAKLGMPQ----FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPF 256

Query: 423 IST 425
            ST
Sbjct: 257 FST 259

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 72.7 bits (178), Expect = 6e-14
 Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 16/104 (15%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H     I +RDLKPENIL    D    + LCDF L    K N +           T  G+
Sbjct: 111 HLHKYDIVYRDLKPENILL---DATGHIALCDFGLS---KANLT-----DNKTTNTFCGT 159

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
            E++APE++      +  GY K  D WSLGV+V+ + CG+ PFY
Sbjct: 160 TEYLAPEVL-----LDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 72.5 bits (178), Expect = 6e-14
 Identities = 54/220 (24%), Positives = 86/220 (39%), Gaps = 74/220 (33%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ--------G 104
           GE LG G++  V+   +  T   YA+K + K        + K  +  H  Q         
Sbjct: 23  GETLGTGSFGRVRIAKHKGTGEYYAIKCLKK------REILKMKQVQHVAQEKSILMELS 76

Query: 105 HPNIIQLLEYYEDDE---------------NHER-------------------------H 124
           HP I+ ++  ++D+                 H R                          
Sbjct: 77  HPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHS 136

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I +RDLKPEN+L    D    VK+ DF     +   T            T  G+ E++
Sbjct: 137 KDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDRT-----------FTLCGTPEYL 182

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           APE++      ++ G+ K  D W++GV++Y  + GYPPF+
Sbjct: 183 APEVI------QSKGHGKAVDWWTMGVLLYEFIAGYPPFF 216

Length = 329

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 72.5 bits (178), Expect = 6e-14
 Identities = 56/170 (32%), Positives = 71/170 (41%), Gaps = 44/170 (25%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL---GSGIKFNTSVHSPLATPLLLTP 304
           HS+   I +RDLKPENIL    D    V L DF L   G      TS           T 
Sbjct: 113 HSLN--IIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTS-----------TF 156

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
            G+ E++APE++          YD+  D W LG V+Y +L G PPFY            +
Sbjct: 157 CGTPEYLAPEVL------RKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR----------D 200

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
           T      IL   ++             IS  A+ L+  LL KD  KRL A
Sbjct: 201 TAEMYDNILNKPLRLKP---------NISVSARHLLEGLLQKDRTKRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 72.7 bits (178), Expect = 7e-14
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 46/192 (23%)

Query: 240 HACQEIL-FHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
           +A Q +L F  +Q   I +RDLKPEN+L    D+   +K+ DF     +   T       
Sbjct: 136 YAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTRT------- 185

Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                T  G+ E++APEI+         G+ K  D W+LG+ +Y +L G PPFY N    
Sbjct: 186 ----YTLCGTPEYIAPEILLNV------GHGKAADWWTLGIFIYEILVGCPPFYAN---- 231

Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL----- 412
                 E       +++  I +G   FP+     + +  K L+++LL  D  KR      
Sbjct: 232 ------EPL-----LIYQKILEGIIYFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKK 276

Query: 413 SAASVLKHPWIS 424
            A +V +HPW  
Sbjct: 277 GAQNVKEHPWFG 288

Length = 340

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 72.5 bits (178), Expect = 8e-14
 Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 62/218 (28%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKE------------VETF 99
           +++G+GA+  V       T   YA+KI++K     R+    F+E            +   
Sbjct: 7   KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNL 66

Query: 100 HHC-QGHPNIIQLLEYY------------ED------------------DENHERHKRIA 128
           H+  Q   N+  +++YY            ED                  D  H+      
Sbjct: 67  HYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YV 124

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMAP 186
           HRD+KP+N+L    D+   ++L DF  GS ++     +V S +A       VG+ ++++P
Sbjct: 125 HRDIKPDNVLL---DKNGHIRLADF--GSCLRLLADGTVQSNVA-------VGTPDYISP 172

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           EI+ A M      Y   CD WSLGV +Y +L G  PFY
Sbjct: 173 EILQA-MEDGKGRYGPECDWWSLGVCMYEMLYGETPFY 209

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 72.5 bits (178), Expect = 1e-13
 Identities = 58/213 (27%), Positives = 81/213 (38%), Gaps = 67/213 (31%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVH--------SPLA 297
           G  HRD+KP+NIL    D+   +KL DF L +G +       +    H        S   
Sbjct: 121 GFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW 177

Query: 298 T---PLLLTP-----------------VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG 337
           +      L P                 VG+  ++APE++        +GY + CD WS+G
Sbjct: 178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLCDWWSVG 231

Query: 338 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ--EILFHSIQQGHYDFPEGEWSTISDE 395
           V++Y +L G PPF  +          ET       E   H   Q            +S E
Sbjct: 232 VILYEMLVGQPPFLAD-------TPAETQLKVINWETTLHIPSQAK----------LSRE 274

Query: 396 AKDLIRRLLVKDARKRL---SAASVLKHPWIST 425
           A DLI R L   A  RL    A  +  HP+   
Sbjct: 275 ASDLILR-LCCGAEDRLGKNGADEIKAHPFFKG 306

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 71.0 bits (174), Expect = 1e-13
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 31/170 (18%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+K  NIL    D    VKL DF  G+  +  T + S  +   + +  G+  +M+P
Sbjct: 125 IVHRDIKGANIL---RDSAGNVKLGDF--GASKRLQT-ICS--SGTGMKSVTGTPYWMSP 176

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++        GY ++ D+WS+G  V  +L   PP          W   E   A  +I 
Sbjct: 177 EVISG------EGYGRKADVWSVGCTVVEMLTEKPP----------WAEFEAMAAIFKI- 219

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             + Q  +   P    S +S +A++ +RR  V++A+KR SA  +L+H ++
Sbjct: 220 --ATQPTNPQLP----SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 70.9 bits (174), Expect = 1e-13
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 72/230 (31%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYA---VKIIDKLPGHSRSRVFKEVETFHHCQ 103
             ++++ +I GKG ++ V   + +L     A   V+I + +   +R    KE++      
Sbjct: 2   GNFKIEKKI-GKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 104 GHPNIIQLLE-YYEDDE------------------------------------------- 119
            HPN+I+ L  + E++E                                           
Sbjct: 61  -HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSAL 119

Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN---TSVHSPLATPLLLT 176
            H   KRI HRD+KP N+          VKL D  LG G  F+   T+ HS + TP    
Sbjct: 120 EHMHSKRIMHRDIKPANVFITATGV---VKLGD--LGLGRFFSSKTTAAHSLVGTPY--- 171

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                 +M+PE ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 172 ------YMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 74/270 (27%), Positives = 108/270 (40%), Gaps = 84/270 (31%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL---GSGIKFNTSVHSPLATPLLLT 303
            H  +  I +RDLK +N+L    D    VK+ DF L   G G    TS           T
Sbjct: 117 LH--ENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFGDRTS-----------T 160

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
             G+ EF+APE++      E S Y +  D W LGV++Y +L G  PF            G
Sbjct: 161 FCGTPEFLAPEVLT-----ETS-YTRAVDWWGLGVLIYEMLVGESPF-----------PG 203

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVL 418
           +     +E +F SI      +P      +S EA  ++RRLL ++  +RL      A  V 
Sbjct: 204 DD----EEEVFDSIVNDEVRYPR----FLSREAISIMRRLLRRNPERRLGSGEKDAEDVK 255

Query: 419 KHPW---ISTAGTAHR---PLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNP 472
           K P+   I+      R   P   P +    +   ++S+F                     
Sbjct: 256 KQPFFRDINWDDLLARKIKPPFVPTI----KGPEDVSNF--------------------- 290

Query: 473 KDEQWLATPTNMRLSPPSE-SLLVQRRQRL 501
            DE++  T     L+PP E  LL +  Q L
Sbjct: 291 -DEEF--TSEAPVLTPPREPRLLTEEEQEL 317

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 71.6 bits (175), Expect = 2e-13
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 39/128 (30%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVHSPLAT---------- 171
           HRD+KP+N+L    D    VKL DF L +G+K       +    H+P +           
Sbjct: 124 HRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR 180

Query: 172 ----------PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
                      L  + VG+ +++APE+   FM    +GY+K CD WSLGV++Y +L GYP
Sbjct: 181 KAETWKKNRRQLAYSTVGTPDYIAPEV---FM---QTGYNKLCDWWSLGVIMYEMLIGYP 234

Query: 222 PFYGNCGE 229
           PF   C E
Sbjct: 235 PF---CSE 239

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 71.3 bits (174), Expect = 2e-13
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 43/177 (24%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I +RDLK EN++    D+   +K+ DF L   GI    ++ +   TP         E++A
Sbjct: 116 IVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFCGTP---------EYLA 163

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++      E + Y +  D W LGVV+Y ++CG  PFY    +D             E 
Sbjct: 164 PEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQD------------HEK 202

Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWIS 424
           LF  I      FP     T+S +AK L+  LL+KD  KRL      A  +++H + +
Sbjct: 203 LFELILMEDIKFPR----TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 33/174 (18%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF--NTSVHSPLATPLLLTPVGSAEFMAP 313
           HRD+KP+NIL    D    ++L DF  GS +K   + +V S +A       VG+ ++++P
Sbjct: 125 HRDIKPDNILM---DMNGHIRLADF--GSCLKLMEDGTVQSSVA-------VGTPDYISP 172

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           EI+ A M      Y   CD WSLGV +Y +L G  PFY                   +I+
Sbjct: 173 EILQA-MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE----------SLVETYGKIM 221

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV---LKHPWIS 424
            H   +  + FP  + + +S++AKDLIRRL+      RL    +    +HP+ +
Sbjct: 222 NH---KERFQFP-AQVTDVSEDAKDLIRRLICS-REHRLGQNGIEDFKQHPFFT 270

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 63/186 (33%), Positives = 79/186 (42%), Gaps = 36/186 (19%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N+L      L   K+ DF L         + S     L    V +  + A
Sbjct: 119 GIMHRDLKPANLLISADGVL---KIADFGLA-------RLFSEEEPRLYSHQVATRWYRA 168

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG-NCGEDC-------GWQRGE 364
           PE++    G  A  YD   DLW++G +   LL G P F G N  E         G    E
Sbjct: 169 PELL---YG--ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEE 223

Query: 365 TCHACQEILFHSIQQ-GHYDFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAAS 416
           T          S+       FPE +      I    S EA DL++ LLV D  KRLSAA 
Sbjct: 224 TWPG-----LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278

Query: 417 VLKHPW 422
            L+HP+
Sbjct: 279 ALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 54/223 (24%), Positives = 78/223 (34%), Gaps = 61/223 (27%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           Q+ Y L   I G G Y  V    +I T    A+K+I   PG     + +E+     C+ H
Sbjct: 2   QEDYELIQRI-GSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR-H 59

Query: 106 PNIIQLLEYYEDDEN-------------------------------------------HE 122
           PNI+     Y   +                                            HE
Sbjct: 60  PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE 119

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             K   HRD+K  NIL         VKL DF + + +   T            + +G+  
Sbjct: 120 TGK--IHRDIKGANILLTEDGD---VKLADFGVSAQLT-ATIAKR-------KSFIGTPY 166

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +MAPE+          GYD +CD+W+LG+    L    PP + 
Sbjct: 167 WMAPEVAAVER---KGGYDGKCDIWALGITAIELAELQPPMFD 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 55/228 (24%), Positives = 81/228 (35%), Gaps = 77/228 (33%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNII--- 109
            E++G+G Y  V    +  T    A+KI+D +       + +E         HPNI    
Sbjct: 11  VEVIGEGTYGKVYKARHKKTGQLVAIKIMD-IIEDEEEEIKEEYNILRKYSNHPNIATFY 69

Query: 110 -------------QL---LEYYED-----------------DEN---------------- 120
                        QL   +E                      E                 
Sbjct: 70  GAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL 129

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTSVHSPLATPLLL 175
           HE    + HRD+K +NIL     +   VKL DF + + +     + NT + +P       
Sbjct: 130 HENK--VIHRDIKGQNILLTKNAE---VKLVDFGVSAQLDSTLGRRNTFIGTPY------ 178

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                  +MAPE++     P+AS YD R D+WSLG+    L  G PP 
Sbjct: 179 -------WMAPEVIACDEQPDAS-YDARSDVWSLGITAIELADGKPPL 218

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 47/196 (23%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           C A  + L     QG+ HRD+K ++IL     +   VKL DF    G     S   P   
Sbjct: 121 CLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR---VKLSDF----GFCAQVSKEVPRRK 173

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
            L    VG+  +MAPE+++         Y    D+WSLG++V  ++ G PP++       
Sbjct: 174 SL----VGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNE----- 218

Query: 359 GWQRGETCHACQEI-------LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                    A + I       L +  +             +S   +  + R+LV+D  +R
Sbjct: 219 -----PPLQAMKRIRDNLPPKLKNLHK-------------VSPRLRSFLDRMLVRDPAQR 260

Query: 412 LSAASVLKHPWISTAG 427
            +AA +L HP+++ AG
Sbjct: 261 ATAAELLNHPFLAKAG 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 70.7 bits (174), Expect = 3e-13
 Identities = 61/213 (28%), Positives = 89/213 (41%), Gaps = 53/213 (24%)

Query: 56  LGKGAYASVQTCVNILTELEYAVK-IIDKLPGHSRS-RVFKEVETFHHCQGHPNIIQLL- 112
           LGKGAY  V   ++  T+   A+K I D     + + R F+E+        HPNI++LL 
Sbjct: 15  LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLN 74

Query: 113 --------------EYYEDDEN--------HERHKR-----------------IAHRDLK 133
                         EY E D +         + HKR                 + HRDLK
Sbjct: 75  VIKAENDKDIYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLK 134

Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           P NIL    +    VKL DF L   +   + +      P+L   V +  + APEI+    
Sbjct: 135 PSNILL---NSDCRVKLADFGLARSL---SELEENPENPVLTDYVATRWYRAPEILLG-- 186

Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
              ++ Y K  D+WS+G ++  +L G P F G 
Sbjct: 187 ---STRYTKGVDMWSVGCILGEMLLGKPLFPGT 216

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 69.9 bits (171), Expect = 3e-13
 Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 31/173 (17%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN-TSVHSPLATPLLLTPVGSAEF 310
           +GI HRD+K  NIL    D    +K+ DF +   ++ N  S  +  A P L    GS  +
Sbjct: 125 RGIIHRDIKGANILV---DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQ---GSVFW 178

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+V          Y ++ D+WSLG +V  +L G  PF               C   Q
Sbjct: 179 MAPEVVKQTS------YTRKADIWSLGCLVVEMLTGKHPF-------------PDCTQLQ 219

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            I F   +    + P    S IS EA D + +    D  KR +AA +LKHP++
Sbjct: 220 AI-FKIGENASPEIP----SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 39/176 (22%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +GI +RDLK +N+L    D+   +K+ DF +    +       +   TP         ++
Sbjct: 115 KGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFCGTP---------DY 162

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APEI+      +   Y++  D WS GV++Y +L G  PF+G   ED             
Sbjct: 163 IAPEIL------KGQKYNESVDWWSFGVLLYEMLIGQSPFHG-EDED------------- 202

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-SAASVLKHPWIST 425
             LF SI      FP      IS EAKD + +L  +D  KRL     + +HP+   
Sbjct: 203 -ELFDSILNDRPHFPR----WISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 39/178 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS      HRD+K  NIL    ++    KL DF + SG   +T            T +G+
Sbjct: 116 HS--NKKIHRDIKAGNILL---NEEGQAKLADFGV-SGQLTDTMAKRN-------TVIGT 162

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++         GY+ + D+WSLG+    +  G PP+                H
Sbjct: 163 PFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSD-------------IH 203

Query: 368 ACQEILF--HSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             + I    +       D PE +W   S E  D +++ LVKD  +R SA  +L+HP+I
Sbjct: 204 PMRAIFMIPNKPPPTLSD-PE-KW---SPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 43/106 (40%), Positives = 52/106 (49%), Gaps = 19/106 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVG 179
           H   + I +RDLKPENIL    D    VKL DF L    I   T  H         T  G
Sbjct: 115 HLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVTH---------TFCG 162

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           + E+MAPEI+        SG+ K  D WSLG ++Y +L G PPF  
Sbjct: 163 TIEYMAPEIL------MRSGHGKAVDWWSLGALMYDMLTGAPPFTA 202

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 69.3 bits (170), Expect = 4e-13
 Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 29/178 (16%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HS   G  HRD+K  NIL     +   VK+ DF + + +         +      T VG
Sbjct: 118 LHS--NGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRK----TFVG 168

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +  +MAPE++      +  GYD + D+WS G+    L  G  P+                
Sbjct: 169 TPCWMAPEVME-----QVHGYDFKADIWSFGITAIELATGAAPYSK-------------- 209

Query: 367 HACQEILFHSIQQGHYDFPEG-EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +   ++L  ++Q        G ++   S   + +I   L KD  KR +A  +LKH + 
Sbjct: 210 YPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 69.7 bits (170), Expect = 5e-13
 Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 38/167 (22%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++ +   TP         E
Sbjct: 114 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP---------E 161

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APE++      E + Y +  D W LGVV+Y ++CG  PFY    +D            
Sbjct: 162 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQD------------ 200

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            E LF  I      FP     T+S EAK L+  LL KD ++RL    
Sbjct: 201 HEKLFELILMEEIRFPR----TLSPEAKSLLSGLLKKDPKQRLGGGP 243

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 69.7 bits (170), Expect = 6e-13
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 39/128 (30%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIK----------FNTSVHSPLA-------- 170
           HRD+KP+N+L    D    VKL DF L +G+K           N S+ S           
Sbjct: 124 HRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKR 180

Query: 171 ---------TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
                      L  + VG+ +++APE+   FM    +GY+K CD WSLGV++Y +L GYP
Sbjct: 181 KAETWKRNRRQLAFSTVGTPDYIAPEV---FM---QTGYNKLCDWWSLGVIMYEMLIGYP 234

Query: 222 PFYGNCGE 229
           PF   C E
Sbjct: 235 PF---CSE 239

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 69.0 bits (169), Expect = 6e-13
 Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 30/172 (17%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL     Q   VKLCDF           V   L   L  T  G++ +MAP
Sbjct: 126 IIHRDIKPSNILLTRKGQ---VKLCDF----------GVSGELVNSLAGTFTGTSFYMAP 172

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +      +   Y    D+WSLG+ +  +     PF            GE      E+L
Sbjct: 173 ERI------QGKPYSITSDVWSLGLTLLEVAQNRFPFP---------PEGEPPLGPIELL 217

Query: 374 FHSIQQGHYDFPEGEWSTI--SDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            + +   + +  +   + I  S+E KD I++ L KD  +R +   +L+HPWI
Sbjct: 218 SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 69.5 bits (171), Expect = 6e-13
 Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 45/198 (22%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS    + HRDLKP NIL    C        +K+CDF L  G+               LT
Sbjct: 120 HS--ANVIHRDLKPSNILVNSNCD-------LKICDFGLARGVD------PDEDEKGFLT 164

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------- 353
             V +  + APE++   +    S Y K  D+WS+G +   LL   P F G          
Sbjct: 165 EYVVTRWYRAPELL---LSS--SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLI 219

Query: 354 -------CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVK 406
                    ED  +   E     +  L    ++      +  +   S EA DL+ ++LV 
Sbjct: 220 VEVLGTPSEEDLKFITSEKA---RNYLKSLPKKPKKPLSK-LFPGASPEAIDLLEKMLVF 275

Query: 407 DARKRLSAASVLKHPWIS 424
           D +KR++A   L HP+++
Sbjct: 276 DPKKRITADEALAHPYLA 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 69.3 bits (169), Expect = 8e-13
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 62/219 (28%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKE------------VETF 99
           +++G+GA+  V       TE  YA+KI++K     R+    F+E            + T 
Sbjct: 7   KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTL 66

Query: 100 HHCQGHPN-------------IIQLLEYYED------------------DENHERHKRIA 128
           H+     N             ++ LL  +ED                     H+ H    
Sbjct: 67  HYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YV 124

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMAP 186
           HRD+KP+N+L    D    ++L DF  GS +K N   +V S +A       VG+ ++++P
Sbjct: 125 HRDIKPDNVLL---DMNGHIRLADF--GSCLKMNQDGTVQSSVA-------VGTPDYISP 172

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           EI+ A M      Y   CD WSLGV +Y +L G  PFY 
Sbjct: 173 EILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 68.5 bits (168), Expect = 9e-13
 Identities = 60/214 (28%), Positives = 81/214 (37%), Gaps = 63/214 (29%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNIIQLL 112
           +G+G Y  V    + LT    A+K I KL   S        +E++       HPNII+LL
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKI-KLRFESEGIPKTALREIKLLK-ELNHPNIIKLL 64

Query: 113 -------------EYYEDD-------------ENHER-------------HK-RIAHRDL 132
                        E+ + D             E+  +             H   I HRDL
Sbjct: 65  DVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDL 124

Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFMAPEIVNA 191
           KPEN+L      L   KL DF L        S  SP       T  V +  + APE++  
Sbjct: 125 KPENLLINTEGVL---KLADFGLAR------SFGSP---VRPYTHYVVTRWYRAPELL-- 170

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            +G    GY    D+WS+G +   LL   P F G
Sbjct: 171 -LG--DKGYSTPVDIWSVGCIFAELLSRRPLFPG 201

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 38/176 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN---TSVHSPLATPLLL 302
           L H   + I HRD+KP N+          VKL D  LG G  F+   T+ HS + TP   
Sbjct: 119 LEHMHSKRIMHRDIKPANVFITATGV---VKLGD--LGLGRFFSSKTTAAHSLVGTPY-- 171

Query: 303 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 362
                  +M+PE ++       +GY+ + D+WSLG ++Y +     PFYG+         
Sbjct: 172 -------YMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD--------- 209

Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
               ++    L   I++   D+P       S+E +DL+ R +  D  KR   + VL
Sbjct: 210 KMNLYS----LCKKIEKC--DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVL 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 42/195 (21%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           QG+ HRD+K ++IL  H  +   VKL DF    G     S   P    L    VG+  +M
Sbjct: 135 QGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKSL----VGTPYWM 183

Query: 312 APEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           APE+++    GPE        D+WSLG++V  ++ G PP++                   
Sbjct: 184 APELISRLPYGPEV-------DIWSLGIMVIEMVDGEPPYF------------------N 218

Query: 371 EILFHSIQQGHYDFPE--GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           E    +++    + P        +S   K  + RLLV+D  +R +AA +LKHP+++ AG 
Sbjct: 219 EPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278

Query: 429 AHRPLVTPQVIRRNQ 443
              P     ++R+N+
Sbjct: 279 ---PSCIVPLMRQNR 290

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 69.0 bits (169), Expect = 1e-12
 Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 34/172 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPV 305
           HS+  G  HRD+KP+N+L    D+   +KL DF  G+ +K + +  V          T V
Sbjct: 159 HSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMDANGMVRCD-------TAV 204

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ ++++PE++ +  G     Y + CD WS+GV +Y +L G  PFY +            
Sbjct: 205 GTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYAD----------SL 252

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
                +I+ H   +    FP+     IS +AKDLI   L  D   RL    V
Sbjct: 253 VGTYSKIMDH---KNSLTFPDD--IEISKQAKDLICAFLT-DREVRLGRNGV 298

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 45/185 (24%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPV 305
            HS  + + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP      
Sbjct: 111 LHS--RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP------ 159

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE++      E + Y +  D W LGVV+Y ++CG  PFY    +D        
Sbjct: 160 ---EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQD-------- 199

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
                E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H
Sbjct: 200 ----HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251

Query: 421 PWIST 425
            +  +
Sbjct: 252 RFFLS 256

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 30/184 (16%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRDLKP N+L     +L   K+CDF L  G   N   ++   T      V +  + APEI
Sbjct: 128 HRDLKPGNLLVNADCEL---KICDFGLARGFSENPGENAGFMTEY----VATRWYRAPEI 180

Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC----QE 371
           + +F       Y K  D+WS+G ++  LL   P F    G+D   Q  +         +E
Sbjct: 181 MLSF-----QSYTKAIDVWSVGCILAELLGRKPVFK---GKDYVDQLNQILQVLGTPDEE 232

Query: 372 ILFHSIQQGHYDF-------PEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L         ++       P+  + +I    +  A DL+ +LL  D  KR+S    L+H
Sbjct: 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292

Query: 421 PWIS 424
           P+++
Sbjct: 293 PYLA 296

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 36/167 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           LF    +GI +RDLK +N++    D    +K+ DF +    K N  +     T    T  
Sbjct: 114 LFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGM---CKEN--IFGGKTTR---TFC 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+ A+       Y K  D W+ GV++Y +L G PPF    GED        
Sbjct: 163 GTPDYIAPEII-AY-----QPYGKSVDWWAFGVLLYEMLAGQPPFD---GED-------- 205

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
               ++ LF SI + +  +P+    ++S EA  + + LL K   KRL
Sbjct: 206 ----EDELFQSIMEHNVSYPK----SLSKEAVSICKGLLTKHPAKRL 244

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 30/171 (17%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRD+KP N+L     Q   VKLCDF + SG   ++   +  A        G   +MAPE 
Sbjct: 127 HRDVKPSNVLINRNGQ---VKLCDFGI-SGYLVDSVAKTIDA--------GCKPYMAPER 174

Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFH 375
           +N  +     GYD + D+WSLG+ +  L  G  P+             ++     + L  
Sbjct: 175 INPEL--NQKGYDVKSDVWSLGITMIELATGRFPY-------------DSWKTPFQQLKQ 219

Query: 376 SIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
            +++     P       S E +D + + L K+ ++R +   +L+HP+    
Sbjct: 220 VVEEPSPQLPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 67.2 bits (165), Expect = 3e-12
 Identities = 60/220 (27%), Positives = 84/220 (38%), Gaps = 62/220 (28%)

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVH 293
           E  H+            I HRDLKP N+L      ++    +KL DF L        S  
Sbjct: 116 EYLHSNW----------ILHRDLKPNNLL------IASDGVLKLADFGLA------RSFG 153

Query: 294 SPLATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           SP      +T  V +  + APE+     G  A  Y    D+WS+G +   LL   P   G
Sbjct: 154 SP---NRKMTHQVVTRWYRAPEL---LFG--ARHYGVGVDMWSVGCIFAELLLRVPFLPG 205

Query: 353 NCGEDCGWQRGETCHAC------------QEILFHSIQQGHYDFPEGEWSTI----SDEA 396
           +   D   Q G+   A                 +   +     FP      I    SD+A
Sbjct: 206 DSDID---QLGKIFEALGTPTEENWPGVTSLPDYVEFKP----FPPTPLKQIFPAASDDA 258

Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTP 436
            DL++RLL  +  KR++A   L+HP+ S       P  TP
Sbjct: 259 LDLLQRLLTLNPNKRITARQALEHPYFSN-----DPAPTP 293

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 30/177 (16%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVG 306
           HS  +GI HRDLK +N+L    D     K+ DF    GI K +  ++        ++  G
Sbjct: 125 HS--KGILHRDLKADNLLV---DADGICKISDF----GISKKSDDIYDNDQN---MSMQG 172

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           S  +MAPE++++     + GY  + D+WSLG VV  +  G  P          W   E  
Sbjct: 173 SVFWMAPEVIHS----YSQGYSAKVDIWSLGCVVLEMFAGRRP----------WSDEEAI 218

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            A  ++     ++     P      +S  A D +      +   R +A  +L+HP+I
Sbjct: 219 AAMFKL---GNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 68/225 (30%)

Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR-----------VFKEVETF 99
           +KGE++GKG Y  V   +N+ T    AVK ++ LP     R           +  E+ET 
Sbjct: 4   VKGELIGKGTYGRVYLALNVTTGEMMAVKQVE-LPATIAGRHDSRQKDMVKALRSEIETL 62

Query: 100 HHCQGHPNIIQLLEYYEDDE-------------------NHER----------------- 123
                H NI+Q L +   +E                    + R                 
Sbjct: 63  KDLD-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121

Query: 124 ---HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
              H + I HRDLK +N+L    D     K+ DF    GI K +  ++        ++  
Sbjct: 122 AYLHSKGILHRDLKADNLLV---DADGICKISDF----GISKKSDDIYDNDQN---MSMQ 171

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           GS  +MAPE++++     + GY  + D+WSLG VV  +  G  P+
Sbjct: 172 GSVFWMAPEVIHS----YSQGYSAKVDIWSLGCVVLEMFAGRRPW 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 41/219 (18%)

Query: 242 CQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 301
           C     HS  +GI +RDLK +N++    D+   +K+ DF +     F  +  S       
Sbjct: 107 CGLQFLHS--KGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRAS------- 154

Query: 302 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 361
            T  G+ +++APEI+          Y    D WS GV++Y +L G  PF+G+  ++    
Sbjct: 155 -TFCGTPDYIAPEILQGLK------YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---- 203

Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK-H 420
                      LF SI+     +P   W  I+ E+KD++ +L  +D  +RL     ++ H
Sbjct: 204 -----------LFESIRVDTPHYP--RW--ITKESKDILEKLFERDPTRRLGVVGNIRGH 248

Query: 421 PWISTAG--TAHRPLVTPQVIRRNQSARELSSFAESAMS 457
           P+  T       +  + P    + +S  + S+F    +S
Sbjct: 249 PFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDREFLS 287

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 73/223 (32%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVF---KEVETFHHCQ 103
           +L+ L  E +GKG++  V   ++  T    A+K+ID L   +   +    +E++    C+
Sbjct: 1   ELFTLL-ECIGKGSFGEVYKAIDKRTNQVVAIKVID-LE-EAEDEIEDIQQEIQFLSQCR 57

Query: 104 GHPNIIQ-------------------------LLEYYEDDEN----------------HE 122
             P I +                         LL+  + DE                 HE
Sbjct: 58  S-PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHE 116

Query: 123 RHKRIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
             K   HRD+K  NIL      LS    VKL DF +   +    S  +        T VG
Sbjct: 117 EGK--IHRDIKAANIL------LSEEGDVKLADFGVSGQLTSTMSKRN--------TFVG 160

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           +  +MAPE++      + SGYD++ D+WSLG+    L  G PP
Sbjct: 161 TPFWMAPEVI------KQSGYDEKADIWSLGITAIELAKGEPP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 66.1 bits (162), Expect = 5e-12
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 17/100 (17%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            + HRDLKP NI     D  + VKL DF L   +  ++S           T VG+  +M+
Sbjct: 130 TVLHRDLKPANIFL---DANNNVKLGDFGLAKILGHDSSFAK--------TYVGTPYYMS 178

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           PE +N         YD++ D+WSLG ++Y L    PPF  
Sbjct: 179 PEQLNH------MSYDEKSDIWSLGCLIYELCALSPPFTA 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 66.5 bits (162), Expect = 6e-12
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 41/209 (19%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
             HS  +GI +RDLK +NIL    D    +K+ DF +           + L      T  
Sbjct: 111 FLHS--KGIVYRDLKLDNILL---DTDGHIKIADFGMCK--------ENMLGDAKTCTFC 157

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+   +G +   Y+   D WS GV++Y +L G  PF+G+  E+        
Sbjct: 158 GTPDYIAPEIL---LGQK---YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-------- 203

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-ASVLKHPWIS 424
                  LF SI+  +  +P   W  ++ EAKD++ +L V++  +RL     + +HP+  
Sbjct: 204 -------LFQSIRMDNPCYP--RW--LTREAKDILVKLFVREPERRLGVKGDIRQHPFFR 252

Query: 425 TA--GTAHRPLVTPQVIRRNQSARELSSF 451
                      + P    + +SA + S+F
Sbjct: 253 EIDWSALEEREIEPPFKPKVKSANDCSNF 281

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 66.4 bits (162), Expect = 7e-12
 Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 44/174 (25%)

Query: 66  TCVNILTELEYAVKIIDKL--------PGH-----SRSRVFKEVET-FHHCQGHPNIIQL 111
           T    LT L+Y+ +  D+L         G      SR RVF E    F+  +    I+  
Sbjct: 52  TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE----IVSA 107

Query: 112 LEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLA 170
           L Y      H     + +RDLK EN++    D+   +K+ DF L   GI    ++ +   
Sbjct: 108 LGYL-----HSC--DVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCG 157

Query: 171 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           TP         E++APE++      E + Y +  D W LGVV+Y ++CG  PFY
Sbjct: 158 TP---------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 65.9 bits (161), Expect = 7e-12
 Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
           I++ L Y +  E H     + HRD+KP NIL    D    VKLCDF + SG   ++   +
Sbjct: 123 IVKALHYLK--EKHG----VIHRDVKPSNILL---DASGNVKLCDFGI-SGRLVDSKAKT 172

Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
             A        G A +MAPE ++         YD R D+WSLG+ +  L  G  P+    
Sbjct: 173 RSA--------GCAAYMAPERIDP--PDPNPKYDIRADVWSLGISLVELATGQFPYKNCK 222

Query: 228 GE 229
            E
Sbjct: 223 TE 224

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 66.2 bits (162), Expect = 8e-12
 Identities = 54/245 (22%), Positives = 87/245 (35%), Gaps = 76/245 (31%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVET---- 98
           +   ++K  +LGKG    V       T   +A+K++DK   +  +   RV  E E     
Sbjct: 1   KHFKKIK--LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL 58

Query: 99  --------FHHCQGHPNIIQLLEYYEDDENH------------ERHKR------------ 126
                   +   Q    +  +++Y    E              E   R            
Sbjct: 59  DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEY 118

Query: 127 -----IAHRDLKPENILCVHPDQLSPVKLCDFDL-------------GSGIKFNTSVHSP 168
                I +RDLKPENIL +H      + L DFDL                     S  + 
Sbjct: 119 LHLLGIVYRDLKPENIL-LHES--GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNS 175

Query: 169 LATPLLLTP--------VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
           + +              VG+ E++APE+++        G+    D W+LG+++Y +L G 
Sbjct: 176 IPSETFSEEPSFRSNSFVGTEEYIAPEVISG------DGHGSAVDWWTLGILLYEMLYGT 229

Query: 221 PPFYG 225
            PF G
Sbjct: 230 TPFKG 234

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 65.8 bits (161), Expect = 8e-12
 Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 36/181 (19%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    D+   +KLCDF + SG   ++   +  A        G   +MAP
Sbjct: 129 IIHRDVKPSNILL---DRNGNIKLCDFGI-SGQLVDSIAKTRDA--------GCRPYMAP 176

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E ++        GYD R D+WSLG+ +Y +  G  P+         W            +
Sbjct: 177 ERIDPSARD---GYDVRSDVWSLGITLYEVATGKFPYP-------KWNS----------V 216

Query: 374 FHSIQQGHYDFP----EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
           F  + Q     P      E    S    + I   L+KD  KR     +L+HP+I      
Sbjct: 217 FDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEER 276

Query: 430 H 430
           +
Sbjct: 277 N 277

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 65.6 bits (160), Expect = 9e-12
 Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 41/203 (20%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRD+K  NIL   P     VKL DF  GS      S+ SP  +      VG+  +MAPE+
Sbjct: 138 HRDIKAGNILLTEPGT---VKLADF--GSA-----SLVSPANSF-----VGTPYWMAPEV 182

Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFH 375
           + A    +   YD + D+WSLG+    L    PP +                     L+H
Sbjct: 183 ILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN--------------MNAMSALYH 225

Query: 376 SIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVT 435
             Q         +WS   D  ++ +   L K  + R S+  +LKH ++       RP   
Sbjct: 226 IAQNDSPTLSSNDWS---DYFRNFVDSCLQKIPQDRPSSEELLKHRFV----LRERPPTV 278

Query: 436 PQ-VIRRNQSA-RELSSFAESAM 456
              +I+R + A REL +     M
Sbjct: 279 IIDLIQRTKDAVRELDNLQYRKM 301

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 66.2 bits (161), Expect = 9e-12
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 59/224 (26%)

Query: 50  RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
           R+K E      ++G+GA+  VQ   +  T   YA+K++ K      S S  F E      
Sbjct: 39  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 98

Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
               P ++QL   ++DD                    N++  ++ A              
Sbjct: 99  FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 158

Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
                 HRD+KP+N+L    D+   +KL DF  G+ +K N             T VG+ +
Sbjct: 159 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 208

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +++PE++ +  G     Y + CD WS+GV +Y +L G  PFY +
Sbjct: 209 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYAD 250

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 43/191 (22%)

Query: 240 HACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 294
           + C+E L      H  + G  HRD+K  NIL         VKL DF + + +   T    
Sbjct: 105 YVCRETLKGLAYLH--ETGKIHRDIKGANILLTEDGD---VKLADFGVSAQLT-ATIAKR 158

Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
                   + +G+  +MAPE+          GYD +CD+W+LG+    L    PP +   
Sbjct: 159 -------KSFIGTPYWMAPEVAAVER---KGGYDGKCDIWALGITAIELAELQPPMFD-- 206

Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFP----EGEWSTISDEAKDLIRRLLVKDARK 410
                       H  + +    I + ++  P    + +W   S    D I++ L KD +K
Sbjct: 207 -----------LHPMRALFL--ISKSNFPPPKLKDKEKW---SPVFHDFIKKCLTKDPKK 250

Query: 411 RLSAASVLKHP 421
           R +A  +L+HP
Sbjct: 251 RPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 53/198 (26%), Positives = 79/198 (39%), Gaps = 54/198 (27%)

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTS 291
           ET       L +  +  + HRD+K +NIL     +   VKL DF + + +     + NT 
Sbjct: 121 ETLRG----LAYLHENKVIHRDIKGQNILLTKNAE---VKLVDFGVSAQLDSTLGRRNTF 173

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
           + +P              +MAPE++     P+AS YD R D+WSLG+    L  G PP  
Sbjct: 174 IGTPY-------------WMAPEVIACDEQPDAS-YDARSDVWSLGITAIELADGKPPL- 218

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI------SDEAKDLIRRLLV 405
             C            H     LF          P     T+      S +  D I   L+
Sbjct: 219 --CDM----------HP-MRALFK--------IPRNPPPTLKSPENWSKKFNDFISECLI 257

Query: 406 KDARKRLSAASVLKHPWI 423
           K+  +R     +L+HP+I
Sbjct: 258 KNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 65.3 bits (159), Expect = 1e-11
 Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 46/224 (20%)

Query: 230 DCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS 284
           +     G+    C+E L      HS Q  + HRD+K +NIL         VKL DF   +
Sbjct: 109 ETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGS---VKLTDFGFCA 163

Query: 285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
            I    S  S        T VG+  +MAPE+V          Y  + D+WSLG++   ++
Sbjct: 164 QITPEQSKRS--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMV 209

Query: 345 CGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLL 404
            G PP+                      L+     G  +    E   +S   +D + R L
Sbjct: 210 EGEPPYLN--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCL 253

Query: 405 VKDARKRLSAASVLKHPWISTAGTAHRPL--VTPQVIRRNQSAR 446
             D  KR SA  +L+HP++  A    +PL  +TP +    ++ +
Sbjct: 254 EMDVEKRGSAKELLQHPFLKIA----KPLSSLTPLIAAAKEATK 293

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 64.9 bits (158), Expect = 1e-11
 Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 32/174 (18%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
              I HRD+K +N+L    +  S V K+ DF         TS       P   T  G+ +
Sbjct: 126 DNQIVHRDIKGDNVLV---NTYSGVVKISDF--------GTSKRLAGINPCTETFTGTLQ 174

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           +MAPE+++   GP   GY    D+WSLG  +  +  G PPF          + GE   A 
Sbjct: 175 YMAPEVIDK--GPR--GYGAPADIWSLGCTIVEMATGKPPFI---------ELGEPQAAM 221

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            ++    I   H + PE    ++S EAK+ I R    D  KR SA  +L+ P++
Sbjct: 222 FKVGMFKI---HPEIPE----SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 17/98 (17%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + +RDLKPENIL    D    + LCDF L    K N             T  G+ E++AP
Sbjct: 114 VIYRDLKPENILL---DYQGHIALCDFGL---CKLNMK-----DDDKTNTFCGTPEYLAP 162

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           E++         GY K  D W+LGV++Y +L G PPFY
Sbjct: 163 ELLLGH------GYTKAVDWWTLGVLLYEMLTGLPPFY 194

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 61/213 (28%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
           E LG+G+Y SV   ++  T    A+K++          + KE+     C   P I++   
Sbjct: 9   EKLGEGSYGSVYKAIHKETGQVVAIKVVPV--EEDLQEIIKEISILKQCD-SPYIVKYYG 65

Query: 114 YYEDDEN------------------------HER----------------H-KRIAHRDL 132
            Y  + +                         E                 H  +  HRD+
Sbjct: 66  SYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDI 125

Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
           K  NIL    ++    KL DF + SG   +T            T +G+  +MAPE++   
Sbjct: 126 KAGNILL---NEEGQAKLADFGV-SGQLTDTMAKRN-------TVIGTPFWMAPEVIQE- 173

Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
                 GY+ + D+WSLG+    +  G PP+  
Sbjct: 174 -----IGYNNKADIWSLGITAIEMAEGKPPYSD 201

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 63/239 (26%)

Query: 32  RRKKTATSLVTSCF--QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR 89
           R +K A  +       +D   +K  ++G+GA+  VQ   +  ++  YA+K++ K     R
Sbjct: 27  RYEKAAEKITKLRMKAEDFDVIK--VIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKR 84

Query: 90  SRV---FKEVETFHHCQGHPNIIQLLEYYEDDE-------------------NHERHKRI 127
           S     ++E +   H      I+QL   ++DD+                   N++  ++ 
Sbjct: 85  SDSAFFWEERDIMAHANS-EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKW 143

Query: 128 A--------------------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--V 165
           A                    HRD+KP+N+L    D+   +KL DF  G+ +K + +  V
Sbjct: 144 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMDANGMV 198

Query: 166 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                     T VG+ ++++PE++ +  G     Y + CD WS+GV +Y +L G  PFY
Sbjct: 199 RCD-------TAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFY 248

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 40/169 (23%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPV 305
            HS+   I +RDLKPENIL    D    + L DF L    I+ N +  +   TP      
Sbjct: 112 LHSLN--IVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTP------ 160

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE+++         YD+  D W LG V+Y +L G PPFY             T
Sbjct: 161 ---EYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSR----------NT 201

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
                 IL   +Q             I++ A+ L+  LL KD  KRL A
Sbjct: 202 AEMYDNILNKPLQLK---------PNITNSARHLLEGLLQKDRTKRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 21/110 (19%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           HE+  +I HRDLK  NIL V  D    VK+ D  +   +K N          +  T +G+
Sbjct: 120 HEQ--KILHRDLKSANILLVANDL---VKIGDLGISKVLKKN----------MAKTQIGT 164

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
             +MAPE+       +   Y  + D+WSLG ++Y +    PPF     +D
Sbjct: 165 PHYMAPEVW------KGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 40/169 (23%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPV 305
            HS    I +RDLKPENIL    D    V L DF L   G++   +  +   TP      
Sbjct: 112 LHS--LNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTFCGTP------ 160

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE++          YD+  D W LG V+Y +L G PPFY     D        
Sbjct: 161 ---EYLAPEVL------RKEPYDRTVDWWCLGAVLYEMLYGLPPFY---SRDVS------ 202

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
                  ++ +I       P G+    +  A DL+  LL KD R+RL A
Sbjct: 203 ------QMYDNILHKPLQLPGGK----TVAACDLLVGLLHKDQRRRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 26/174 (14%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL     Q   +KLCDF           V   L   +  T VG++ +M+P
Sbjct: 125 IMHRDIKPSNILVNSRGQ---IKLCDF----------GVSGELINSIADTFVGTSTYMSP 171

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +      +   Y  + D+WSLG+ +  L  G  PF  +  +D G    +      ++L
Sbjct: 172 ERI------QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG---QDDPMGILDLL 222

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK-HPWISTA 426
              +Q+     P  ++       +D +   L+KD  +R +   +    P+I   
Sbjct: 223 QQIVQEPPPRLPSSDFPED---LRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 48/193 (24%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G  HRDLKPEN+L   P+    VK+ DF L   I+         + P     V +  +
Sbjct: 117 KHGFFHRDLKPENLLVSGPEV---VKIADFGLAREIR---------SRPPYTDYVSTRWY 164

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APEI+       ++ Y    D+W+LG ++  L    P F G+   D  ++    C    
Sbjct: 165 RAPEIL-----LRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYK---IC---- 212

Query: 371 EILFHSIQQGHYDFPEGE---------------------WSTISDEAKDLIRRLLVKDAR 409
            +L    +Q   D+PEG                          S EA DLI+ +L  D +
Sbjct: 213 SVLGTPTKQ---DWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPK 269

Query: 410 KRLSAASVLKHPW 422
           KR +A+  L+HP+
Sbjct: 270 KRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 63.5 bits (155), Expect = 5e-11
 Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 59/219 (26%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHP 106
           Y++ G I G+GA+  V    +  T    A+K +   +L G   ++  +E++    CQ HP
Sbjct: 2   YKILGRI-GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ-HP 59

Query: 107 NIIQLLEYYEDDEN-----------------HERH-----------------------KR 126
            +++LL+ +                       E                           
Sbjct: 60  YVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG 119

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLKP N+L      L   K+ DF L         + S     L    V +  + AP
Sbjct: 120 IMHRDLKPANLLISADGVL---KIADFGLA-------RLFSEEEPRLYSHQVATRWYRAP 169

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E++    G  A  YD   DLW++G +   LL G P F G
Sbjct: 170 ELL---YG--ARKYDPGVDLWAVGCIFAELLNGSPLFPG 203

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 64.0 bits (156), Expect = 5e-11
 Identities = 59/217 (27%), Positives = 83/217 (38%), Gaps = 59/217 (27%)

Query: 56  LGKGAYASVQTCVNILTELE--YAVKIIDKLPGHSRS--RVFKEVETFHHCQGHPNIIQL 111
           LG+GAY  V +  N  T  E   A+K I  +        R  +E++   H +GH NI  L
Sbjct: 8   LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL 67

Query: 112 -------------LEYYEDDENHERHKRIA------------------------------ 128
                        L  YE+    + H+ I                               
Sbjct: 68  YDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVL 127

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRDLKP N+L     +L   K+CDF L  G   N   ++   T      V +  + APEI
Sbjct: 128 HRDLKPGNLLVNADCEL---KICDFGLARGFSENPGENAGFMTEY----VATRWYRAPEI 180

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           + +F       Y K  D+WS+G ++  LL   P F G
Sbjct: 181 MLSF-----QSYTKAIDVWSVGCILAELLGRKPVFKG 212

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 63.3 bits (154), Expect = 5e-11
 Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 38/186 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L    ++ I +RDLKPENIL    D    +++ D  L   I    ++            V
Sbjct: 115 LEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGETIRG---------RV 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE+V          Y    D W LG ++Y ++ G  PF          QR E 
Sbjct: 163 GTVGYMAPEVVK------NERYTFSPDWWGLGCLIYEMIEGKSPFR---------QRKE- 206

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
                ++    +++   +  E      S+ A+ + R+LL KD   RL      A  V  H
Sbjct: 207 -----KVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261

Query: 421 PWISTA 426
           P+  TA
Sbjct: 262 PFFRTA 267

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 62.5 bits (152), Expect = 6e-11
 Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 60/217 (27%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFK---EVETFHHCQGHP 106
           +G++LG+GA+  V  C ++ T  E AVK +  D     ++  V     E++   + Q H 
Sbjct: 6   RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HE 64

Query: 107 NIIQLLEYYEDDEN-------------HERHK---------------------------R 126
            I+Q      DDE               ++ K                            
Sbjct: 65  RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM 124

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K  NIL    D    VKL DF  G+  +  T + S  +   + +  G+  +M+P
Sbjct: 125 IVHRDIKGANIL---RDSAGNVKLGDF--GASKRLQT-ICS--SGTGMKSVTGTPYWMSP 176

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E+++        GY ++ D+WS+G  V  +L   PP+
Sbjct: 177 EVISG------EGYGRKADVWSVGCTVVEMLTEKPPW 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 63.5 bits (154), Expect = 6e-11
 Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 62/219 (28%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKE------------VETF 99
           +++G+GA+  V        +  +A+KI++K     R+    F+E            + T 
Sbjct: 7   KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTL 66

Query: 100 HHC-QGHPNIIQLLEYY-----------------ED-------------DENHERHKRIA 128
           H+  Q   N+  +++YY                 ED             D  H+ H    
Sbjct: 67  HYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YV 124

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF--NTSVHSPLATPLLLTPVGSAEFMAP 186
           HRD+KP+NIL    D    ++L DF  GS +K   + +V S +A       VG+ ++++P
Sbjct: 125 HRDIKPDNILM---DMNGHIRLADF--GSCLKLMEDGTVQSSVA-------VGTPDYISP 172

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           EI+ A M      Y   CD WSLGV +Y +L G  PFY 
Sbjct: 173 EILQA-MEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 62.9 bits (153), Expect = 7e-11
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 31/109 (28%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP----- 177
           H+  I +RD+K ENIL    D    V L DF L               +   L       
Sbjct: 122 HQLGIIYRDIKLENILL---DSEGHVVLTDFGL---------------SKEFLAEEEERA 163

Query: 178 ---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
               G+ E+MAPE++    G    G+DK  D WSLGV+ + LL G  PF
Sbjct: 164 YSFCGTIEYMAPEVIR---GGS-GGHDKAVDWWSLGVLTFELLTGASPF 208

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 63.7 bits (155), Expect = 7e-11
 Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 51/141 (36%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSG------------------------------ 158
           HRD+KP+NIL    D+   +KL DF L +G                              
Sbjct: 124 HRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVA 180

Query: 159 ---IKFNTSVHSPLAT------PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 209
              I    S    +AT       +  + VG+ +++APEI   F+     GY + CD WSL
Sbjct: 181 VDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEI---FLQ---QGYGQECDWWSL 234

Query: 210 GVVVYILLCGYPPFYGNCGED 230
           G +++  L G+PPF   C E+
Sbjct: 235 GAIMFECLIGWPPF---CSEN 252

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 62.8 bits (153), Expect = 7e-11
 Identities = 54/195 (27%), Positives = 77/195 (39%), Gaps = 43/195 (22%)

Query: 240 HACQEILF-HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
              + + F HS    + HRDLK  NIL         VKL DF + +  K           
Sbjct: 111 QMLEALNFLHS--HKVIHRDLKAGNILLTLDGD---VKLADFGVSAKNKSTLQKRD---- 161

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
               T +G+  +MAPE+V      +   YD + D+WSLG+ +  L    PP         
Sbjct: 162 ----TFIGTPYWMAPEVVACETFKDNP-YDYKADIWSLGITLIELAQMEPP--------- 207

Query: 359 GWQRGETCHA---CQEILFHSIQQGH---YDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                   H       +L   I +      D P   WS+      D ++  LVKD   R 
Sbjct: 208 --------HHELNPMRVLL-KILKSEPPTLDQPSK-WSS---SFNDFLKSCLVKDPDDRP 254

Query: 413 SAASVLKHPWISTAG 427
           +AA +LKHP++S   
Sbjct: 255 TAAELLKHPFVSDQS 269

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 62.9 bits (153), Expect = 8e-11
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 17/99 (17%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I +RDLKPENIL    D+   +KL DF L        S+          +  G+ E+MAP
Sbjct: 119 IIYRDLKPENILL---DEEGHIKLTDFGLS-----KESIDHEKKA---YSFCGTVEYMAP 167

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+VN        G+ +  D WS GV+++ +L G  PF G
Sbjct: 168 EVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQG 200

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 63.3 bits (154), Expect = 8e-11
 Identities = 39/103 (37%), Positives = 48/103 (46%), Gaps = 23/103 (22%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDL---GSGIKFNTSVHSPLATPLLLTPVGSA 181
             I +RDLKPENIL    D    V L DF L   G      TS           T  G+ 
Sbjct: 115 LNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTS-----------TFCGTP 160

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           E++APE++          YD+  D W LG V+Y +L G PPFY
Sbjct: 161 EYLAPEVL------RKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 62.4 bits (151), Expect = 9e-11
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 32/169 (18%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+K  NIL    D    VKL DF  G+  +  T   S      + +  G+  +M+P
Sbjct: 127 IVHRDIKGANIL---RDSAGNVKLGDF--GASKRLQTICMSGTG---IRSVTGTPYWMSP 178

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++        GY ++ D+WSLG  V  +L   PP          W   E   A  +I 
Sbjct: 179 EVISG------EGYGRKADVWSLGCTVVEMLTEKPP----------WAEYEAMAAIFKI- 221

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
             + Q  +   P    S IS+ A+D +  + V +AR R SA  +L+HP+
Sbjct: 222 --ATQPTNPQLP----SHISEHARDFLGCIFV-EARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 63.1 bits (153), Expect = 9e-11
 Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 57/216 (26%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQL 111
           +++G+GA+  VQ   +  ++  YA+K++ K      S S  F E          P ++QL
Sbjct: 49  KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 108

Query: 112 LEYYEDDE-------------------NHERHKRIA--------------------HRDL 132
              ++DD+                   N++  ++ A                    HRD+
Sbjct: 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 168

Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPVGSAEFMAPEIVN 190
           KP+N+L    D+   +KL DF  G+ +K + +  V          T VG+ ++++PE++ 
Sbjct: 169 KPDNMLL---DKHGHLKLADF--GTCMKMDETGMVRCD-------TAVGTPDYISPEVLK 216

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +  G     Y + CD WS+GV ++ +L G  PFY +
Sbjct: 217 SQGGD--GYYGRECDWWSVGVFLFEMLVGDTPFYAD 250

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 30/139 (21%)

Query: 88  SRSRVFKEVET-FHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLS 146
           SR RVF E    F+  +    I+  L+Y   ++N      + +RDLK EN++    D+  
Sbjct: 87  SRERVFSEDRARFYGAE----IVSALDYLHSEKN------VVYRDLKLENLML---DKDG 133

Query: 147 PVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD 205
            +K+ DF L   GIK   ++ +   TP         E++APE++      E + Y +  D
Sbjct: 134 HIKITDFGLCKEGIKDGATMKTFCGTP---------EYLAPEVL------EDNDYGRAVD 178

Query: 206 LWSLGVVVYILLCGYPPFY 224
            W LGVV+Y ++CG  PFY
Sbjct: 179 WWGLGVVMYEMMCGRLPFY 197

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 33/178 (18%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS+  G  HRD+KP+N+L    D+   +KL DF  G+ +K N             T VG+
Sbjct: 159 HSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGT 206

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            ++++PE++ +  G     Y + CD WS+GV +Y +L G  PFY +              
Sbjct: 207 PDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYAD----------SLVG 254

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
              +I+ H   +    FP+   + IS EAK+LI   L  D   RL       + +H +
Sbjct: 255 TYSKIMNH---KNSLTFPDD--NDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLF 306

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 38/183 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L    ++   +RDLKPENIL    D    +++ D  L   I    S+            V
Sbjct: 115 LEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRG---------RV 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++N         Y    D W LG ++Y ++ G  PF           RG  
Sbjct: 163 GTVGYMAPEVLN------NQRYTLSPDYWGLGCLIYEMIEGQSPF-----------RGRK 205

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
               +E +   + +      E   +  S+EAK + + LL KD ++RL      A  V +H
Sbjct: 206 EKVKREEVDRRVLETE----EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261

Query: 421 PWI 423
           P+ 
Sbjct: 262 PFF 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 63/221 (28%)

Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR------VFKEVETFHHCQG 104
           LKG+ LG GA++S     ++ T    AVK +  +   S  +      + KE+        
Sbjct: 3   LKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN- 61

Query: 105 HPNIIQLLEYYEDDEN------------------------------------------HE 122
           HP+II++L    +D +                                          HE
Sbjct: 62  HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHE 121

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
              +I HRD+K  N+L     Q   +++ DF  G+  +         A       +G+  
Sbjct: 122 N--QIIHRDVKGANLLIDSTGQR--LRIADF--GAAARLAAKGTG--AGEFQGQLLGTIA 173

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           FMAPE++          Y + CD+WS+G V+  +    PP+
Sbjct: 174 FMAPEVL------RGEQYGRSCDVWSVGCVIIEMATAKPPW 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 67/219 (30%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR-----VFKEVETFHHCQGHP 106
           KGE+LG G++ SV   +N+     +AVK +         +     + +E+      Q HP
Sbjct: 4   KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HP 62

Query: 107 NIIQLLEYYEDDEN------------------------------------------HERH 124
           NI+Q L    +++N                                          H+R+
Sbjct: 63  NIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN 122

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
               HRD+K  NIL    D    VKL DF +   +   +   S           GS  +M
Sbjct: 123 --TVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFSFAKSF---------KGSPYWM 168

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      +  GY    D+WSLG  V  +  G PP+
Sbjct: 169 APEVIA-----QQGGYGLAADIWSLGCTVLEMATGKPPW 202

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 20/104 (19%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
           I++ LEY      H +   I HRD+KP N+L     Q   VKLCDF + SG   ++   +
Sbjct: 112 IVKALEYL-----HSKLSVI-HRDVKPSNVLINRNGQ---VKLCDFGI-SGYLVDSVAKT 161

Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV 211
             A        G   +MAPE +N  +     GYD + D+WSLG+
Sbjct: 162 IDA--------GCKPYMAPERINPEL--NQKGYDVKSDVWSLGI 195

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 61.9 bits (150), Expect = 2e-10
 Identities = 56/184 (30%), Positives = 77/184 (41%), Gaps = 44/184 (23%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPV 305
            HSI   I +RDLKPENIL    D    V L DF L   GI  + +  +   TP      
Sbjct: 112 LHSIN--IVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP------ 160

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE++          YD   D W LG V+Y +L G PPFY              
Sbjct: 161 ---EYLAPEVI------RKQPYDNTVDWWCLGAVLYEMLYGLPPFY-------------- 197

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA----SVLKHP 421
           C    E ++ +I         G     S  A  ++  LL KD ++RL A      + +HP
Sbjct: 198 CRDVAE-MYDNILHKPLVLRPG----ASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHP 252

Query: 422 WIST 425
           +  +
Sbjct: 253 FFES 256

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 44/169 (26%)

Query: 71  LTELEYAVKIIDKL--------PGH-----SRSRVFKEVET-FHHCQGHPNIIQLLEYYE 116
           LT L+YA +  D+L         G      SR RVF E    F+  +    I+  LEY  
Sbjct: 57  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE----IVSALEYL- 111

Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
               H R   + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP   
Sbjct: 112 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP--- 159

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                 E++APE++      E + Y +  D W LGVV+Y ++CG  PFY
Sbjct: 160 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 33/211 (15%)

Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C +  + L +   QG+ HRD+K ++IL     +   VKL DF   + I  +    
Sbjct: 118 QIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKR 174

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
             L        VG+  +MAPE+++       + Y    D+WSLG++V  ++ G PP++  
Sbjct: 175 KSL--------VGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYF-- 218

Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
                     ++     + L  S      +        IS   +D + R+L ++ ++R +
Sbjct: 219 ---------SDSPVQAMKRLRDSPPPKLKNA-----HKISPVLRDFLERMLTREPQERAT 264

Query: 414 AASVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
           A  +L HP++   G     +   Q  R+  S
Sbjct: 265 AQELLDHPFLLQTGLPECLVPLIQQYRKRTS 295

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 61.1 bits (148), Expect = 4e-10
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 44/209 (21%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            +GI +RDLK +N+L  H       KL DF +     FN    S        T  G+ ++
Sbjct: 114 DKGIIYRDLKLDNVLLDHEGH---CKLADFGMCKEGIFNGKTTS--------TFCGTPDY 162

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APEI+   +      Y    D W++GV++Y +LCG+ PF     +D             
Sbjct: 163 IAPEILQEML------YGPSVDWWAMGVLLYEMLCGHAPFEAENEDD------------- 203

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWIS 424
             LF +I      +P    + +S +A D+++  + K+   RL +       ++L+HP+  
Sbjct: 204 --LFEAILNDEVVYP----TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFK 257

Query: 425 TAGTA--HRPLVTPQVIRRNQSARELSSF 451
                  +R  + P    R +S  ++S+F
Sbjct: 258 ELDWEKLNRRQIEPPFRPRIKSREDVSNF 286

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 20/100 (20%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I +RDLKPEN+L    D+   +K+ DF     +   T            T  G+ E++AP
Sbjct: 152 IVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDTRT-----------YTLCGTPEYIAP 197

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           EI+         G+ K  D W+LG+ +Y +L G PPFY N
Sbjct: 198 EILLNV------GHGKAADWWTLGIFIYEILVGCPPFYAN 231

Length = 340

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 61/217 (28%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNIIQ- 110
           E++G GA A V   + +    + A+K ID  K    S   + KEV+    C  HPN+++ 
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCN-HPNVVKY 64

Query: 111 ------------LLEY-------------YEDDENHE------------------RHKRI 127
                       ++ Y             Y      E                   + +I
Sbjct: 65  YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQI 124

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRD+K  NIL     +   VK+ DF + + +         +      T VG+  +MAPE
Sbjct: 125 -HRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRK----TFVGTPCWMAPE 176

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           ++      +  GYD + D+WS G+    L  G  P+ 
Sbjct: 177 VME-----QVHGYDFKADIWSFGITAIELATGAAPYS 208

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 60.8 bits (147), Expect = 6e-10
 Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 37/180 (20%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPV 305
           HS+  G+ HRD+KP+N+L    D+   +KL DF  G+ +K + +  V          T V
Sbjct: 159 HSM--GLIHRDVKPDNMLL---DKHGHLKLADF--GTCMKMDETGMVRCD-------TAV 204

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ ++++PE++ +  G     Y + CD WS+GV ++ +L G  PFY +            
Sbjct: 205 GTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLFEMLVGDTPFYAD----------SL 252

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
                +I+ H   +   +FPE     IS  AK+LI   L  D   RL       + +HP+
Sbjct: 253 VGTYSKIMDH---KNSLNFPED--VEISKHAKNLICAFLT-DREVRLGRNGVEEIKQHPF 306

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 19/100 (19%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            I +RDLKPENIL    D    V L DF L   GI  + +  +   TP         E++
Sbjct: 116 NIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP---------EYL 163

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           APE++          YD   D W LG V+Y +L G PPFY
Sbjct: 164 APEVI------RKQPYDNTVDWWCLGAVLYEMLYGLPPFY 197

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 60.1 bits (145), Expect = 8e-10
 Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 44/169 (26%)

Query: 71  LTELEYAVKIIDKL--------PGH-----SRSRVFKEVET-FHHCQGHPNIIQLLEYYE 116
           LT L+Y+ +  D+L         G      SR RVF E  T F+  +    I+  L+Y  
Sbjct: 57  LTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAE----IVSALDYLH 112

Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
                    +I +RDLK EN++    D+   +K+ DF L   GI    ++ +   TP   
Sbjct: 113 SG-------KIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFCGTP--- 159

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                 E++APE++      E + Y +  D W LGVV+Y ++CG  PFY
Sbjct: 160 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 60.8 bits (147), Expect = 8e-10
 Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 36/205 (17%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRDLK  NI  + P  +  +KL DF  G   +++ SV   +A+    TP     ++APE+
Sbjct: 192 HRDLKSANIFLM-PTGI--IKLGDF--GFSKQYSDSVSLDVASSFCGTPY----YLAPEL 242

Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFH 375
                  E   Y K+ D+WSLGV++Y LL  + PF G        QR       Q++L+ 
Sbjct: 243 W------ERKRYSKKADMWSLGVILYELLTLHRPFKGPS------QR----EIMQQVLY- 285

Query: 376 SIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLV 434
               G YD FP      +S   K L+  LL K+   R +   +L   ++       + +V
Sbjct: 286 ----GKYDPFPCP----VSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYVANLFQDIV 337

Query: 435 -TPQVIRRNQSARELSSFAESAMSA 458
              + I  +     L    ES   A
Sbjct: 338 RHSETISPHDREEILRQLQESGERA 362

Length = 478

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 59.6 bits (145), Expect = 8e-10
 Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 28/185 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              I HRD+KPENIL     +   +KLCDF       F  ++ +      L   V +  +
Sbjct: 118 SHNIIHRDIKPENILV---SESGVLKLCDFG------FARALRAR-PASPLTDYVATRWY 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC- 369
            APE++   +G   + Y K  D+W++G ++  LL G P F G+   D  +   +      
Sbjct: 168 RAPELL---VGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLP 222

Query: 370 --QEILFHS---------IQQGHYDFPEGEWSTI-SDEAKDLIRRLLVKDARKRLSAASV 417
              + LF S          +    +  E  +    S  A D ++  L  D ++RL+   +
Sbjct: 223 PSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDEL 282

Query: 418 LKHPW 422
           L+HP+
Sbjct: 283 LQHPY 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 59.7 bits (144), Expect = 9e-10
 Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 49/219 (22%)

Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H   QG+A        HRD+K  NIL   P Q   VKL DF  GS      S  SP  + 
Sbjct: 128 HGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ---VKLADF--GSA-----SKSSPANSF 177

Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                VG+  +MAPE++ A    +   YD + D+WSLG+    L    PP +        
Sbjct: 178 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 222

Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                        L+H  Q         EW   +D  +  +   L K  ++R ++A +L+
Sbjct: 223 -------MNAMSALYHIAQNDSPTLQSNEW---TDSFRGFVDYCLQKIPQERPASAELLR 272

Query: 420 HPWISTAGTAHRPL-VTPQVIRRNQSA-RELSSFAESAM 456
           H ++       RP  V   +I+R + A REL +     M
Sbjct: 273 HDFVRR----DRPARVLIDLIQRTKDAVRELDNLQYRKM 307

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 59.9 bits (145), Expect = 9e-10
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 45/180 (25%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           + G+ +RDLK +NIL    D     KL DF +   GI    +  +   TP         +
Sbjct: 114 RHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFCGTP---------D 161

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+      +   Y    D W+LGV++Y ++ G PPF  +  +D            
Sbjct: 162 YIAPEIL------QELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD------------ 203

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA-------SVLKHPW 422
              LF SI   H D     W  +S EA  +++  + K+  KRL          ++ +HP+
Sbjct: 204 ---LFESIL--HDDVLYPVW--LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 22/118 (18%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
           +++ L++ +++ N      I HRD+KP N+L     Q   VKLCDF           V  
Sbjct: 111 VVKGLKFLKEEHN------IIHRDVKPTNVLVNGNGQ---VKLCDF----------GVSG 151

Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPP 222
            L   L  T +G   +MAPE + +    +   Y  + D+WSLG+ +  +  G   YPP
Sbjct: 152 NLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP 209

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 44/133 (33%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVH--------SPLAT-- 171
           HRD+KP+NIL    D+   +KL DF L +G +       +    H        S   +  
Sbjct: 124 HRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI 180

Query: 172 -PLLLTP-----------------VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 213
               L P                 VG+  ++APE++        +GY + CD WS+GV++
Sbjct: 181 DRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLCDWWSVGVIL 234

Query: 214 YILLCGYPPFYGN 226
           Y +L G PPF  +
Sbjct: 235 YEMLVGQPPFLAD 247

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 59.0 bits (143), Expect = 1e-09
 Identities = 58/217 (26%), Positives = 82/217 (37%), Gaps = 55/217 (25%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           D++ + GE LG GA+  V    +  T L  A KII             E++    C+ HP
Sbjct: 5   DIWEIIGE-LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK-HP 62

Query: 107 NIIQLLE--YYEDD-----------------ENHER---------------------H-K 125
           NI+ L E  +YE+                     ER                     H  
Sbjct: 63  NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           ++ HRDLK  NIL         VKL DF + +  K               T +G+  +MA
Sbjct: 123 KVIHRDLKAGNILLTLDGD---VKLADFGVSAKNKSTLQKRD--------TFIGTPYWMA 171

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           PE+V      +   YD + D+WSLG+ +  L    PP
Sbjct: 172 PEVVACETFKDNP-YDYKADIWSLGITLIELAQMEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 35/168 (20%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+K  N+     D    VK+ D     G+    S ++  A     T VG+  +++P
Sbjct: 122 ILHRDIKSLNLFLDAYDN---VKIGDL----GVAKLLSDNTNFAN----TIVGTPYYLSP 170

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+       E   Y+++ D+W+LGVV+Y    G  PF  N                Q  L
Sbjct: 171 ELC------EDKPYNEKSDVWALGVVLYECCTGKHPFDAN---------------NQGAL 209

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
              I +G +      +S    +   LI + L KD R+R     +L++P
Sbjct: 210 ILKIIRGVFPPVSQMYSQ---QLAQLIDQCLTKDYRQRPDTFQLLRNP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 59.0 bits (142), Expect = 1e-09
 Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 50/229 (21%)

Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C  C + L       + HRD+K +N+L         VKL DF   + I    S  
Sbjct: 116 QIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQSKR 172

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
           S        T VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+   
Sbjct: 173 S--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLN- 217

Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
                              L+     G  +    E   +S   +D + R L  D  KR S
Sbjct: 218 -------------ENPLRALYLIATNGTPELQNPE--KLSPIFRDFLNRCLEMDVEKRGS 262

Query: 414 AASVLKHPWISTAGTAHRPL--VTPQVIRRNQSARELSSFAESAMSANR 460
           A  +L+HP++  A    +PL  +TP ++            A+ AM +NR
Sbjct: 263 AKELLQHPFLKLA----KPLSSLTPLILA-----------AKEAMKSNR 296

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 18/103 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H   +RI +RDLKPEN+L    D    V++ D  L   +K    +     TP        
Sbjct: 110 HLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAGTP-------- 158

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE++    G     YD   D ++LG  +Y ++ G  PF
Sbjct: 159 -GYMAPEVL---QGEV---YDFSVDWFALGCTLYEMIAGRSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 53/207 (25%), Positives = 75/207 (36%), Gaps = 71/207 (34%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQ-- 110
             LG+GA  SV  C    T + +A+K I   P    + ++ +E+E    C+  P I++  
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK-SPYIVKYY 65

Query: 111 -------------LLEYYED---------------------------------DENHERH 124
                         +EY E                                     H R 
Sbjct: 66  GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR- 124

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            +I HRD+KP NIL     Q   VKLCDF           V   L   L  T  G++ +M
Sbjct: 125 -KIIHRDIKPSNILLTRKGQ---VKLCDF----------GVSGELVNSLAGTFTGTSFYM 170

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGV 211
           APE +      +   Y    D+WSLG+
Sbjct: 171 APERI------QGKPYSITSDVWSLGL 191

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 15/98 (15%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           +I HRD+KP NIL    D+   +KLCDF + SG   ++   +  A        G   +MA
Sbjct: 128 KIIHRDVKPSNILL---DRNGNIKLCDFGI-SGQLVDSIAKTRDA--------GCRPYMA 175

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE ++        GYD R D+WSLG+ +Y +  G  P+
Sbjct: 176 PERIDPSARD---GYDVRSDVWSLGITLYEVATGKFPY 210

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 19/99 (19%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           I +RDLKPENIL    D    + L DF L    I+ N +  +   TP         E++A
Sbjct: 117 IVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTP---------EYLA 164

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           PE+++         YD+  D W LG V+Y +L G PPFY
Sbjct: 165 PEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFY 197

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 38/176 (21%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++ I +RDLKPENIL    D    +++ D  L   I    +V            VG+  +
Sbjct: 120 RERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVRG---------RVGTVGY 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++N         Y    D W LG ++Y ++ G  PF           R       +
Sbjct: 168 MAPEVIN------NEKYTFSPDWWGLGCLIYEMIQGQSPF-----------RKRKERVKR 210

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
           E +   +++   ++ E      S++AK + R LL K+ ++RL      AA V +HP
Sbjct: 211 EEVDRRVKEDQEEYSE----KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 59.0 bits (142), Expect = 2e-09
 Identities = 60/220 (27%), Positives = 91/220 (41%), Gaps = 43/220 (19%)

Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HRD+K +NIL         VKL DF   + I    S
Sbjct: 116 QIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQS 170

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S        T VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 171 KRS--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYL 216

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  +R
Sbjct: 217 N--------------ENPLRALYLIATNGTPELQNPE--RLSAVFRDFLNRCLEMDVDRR 260

Query: 412 LSAASVLKHPWISTAGTAHRPL--VTPQVIRRNQSARELS 449
            SA  +L+HP++  A    +PL  +TP +I   ++ +  S
Sbjct: 261 GSAKELLQHPFLKLA----KPLSSLTPLIIAAKEAIKNSS 296

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 32/187 (17%)

Query: 240 HACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           + C+EIL    H  Q  + HRD+K +N+L     + + VKL DF + + +       +  
Sbjct: 115 YICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRN-- 169

Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
                 T +G+  +MAPE++     P+A+ YD + DLWSLG+    +  G PP       
Sbjct: 170 ------TFIGTPYWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMAEGAPPL------ 216

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            C              LF   +         +WS    + +  I   LVK+  +R +   
Sbjct: 217 -CDMHP-------MRALFLIPRNPAPRLKSKKWSK---KFQSFIESCLVKNHSQRPTTEQ 265

Query: 417 VLKHPWI 423
           ++KHP+I
Sbjct: 266 LMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 46/196 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  + GI HRD+KPENIL +  D L   KL DF  GS       ++S    P     +
Sbjct: 113 LDHMHRNGIFHRDIKPENIL-IKDDIL---KLADF--GSC----RGIYS---KPPYTEYI 159

Query: 306 GSAEFMAPE--IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            +  + APE  + + + GP+        D+W++G V + +L  +P F G    D      
Sbjct: 160 STRWYRAPECLLTDGYYGPKM-------DIWAVGCVFFEILSLFPLFPGTNELD------ 206

Query: 364 ETCHACQEIL----------FHSIQQGHYDFPEGEWSTI-------SDEAKDLIRRLLVK 406
                  ++L          F   +  +Y+FP  + + +       S E  DL+++LL  
Sbjct: 207 -QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAY 265

Query: 407 DARKRLSAASVLKHPW 422
           D  +R++A   L+HP+
Sbjct: 266 DPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 67/219 (30%)

Query: 56  LGKGAYASVQTCVNILTELEYAVK---IIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
           +G+G ++ V     +L     A+K   I + +   +R    KE++       HPN+I+ L
Sbjct: 10  IGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYL 68

Query: 113 E-YYEDDE-------------------------------------------NHERHKRIA 128
           + + ED+E                                            H   +R+ 
Sbjct: 69  DSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVM 128

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV-HSPLATPLLLTPVGSAEFMAPE 187
           HRD+KP N+          VKL D  LG      T+  HS + TP          +M+PE
Sbjct: 129 HRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPY---------YMSPE 176

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 177 RIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 58.3 bits (141), Expect = 3e-09
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 16/111 (14%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSV----HSPLATPLLLTP--VG 179
           I HRDLKP+N+L      +  +KL DF L   G+   T+     H    T   L     G
Sbjct: 122 IVHRDLKPDNLLIT---SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCG 178

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           + E++APE++         GY K  D W++G+++Y  L G  PF+G+  E+
Sbjct: 179 TPEYIAPEVI------LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 223

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 51/193 (26%), Positives = 72/193 (37%), Gaps = 39/193 (20%)

Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
           E   W   +   A   I  H    GI HRD+K  NI      +   +KL DF +      
Sbjct: 101 EMVLWYLFQIVSAVSYI--HKA--GILHRDIKTLNIFL---TKAGLIKLGDFGISK--IL 151

Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            +         +  T VG+  +M+PE+       +   Y+ + D+W+LG V+Y LL    
Sbjct: 152 GSE------YSMAETVVGTPYYMSPELC------QGVKYNFKSDIWALGCVLYELLTLKR 199

Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
            F                      L   I QG+Y       S  S E   L+  LL +D 
Sbjct: 200 TFDATN---------------PLNLVVKIVQGNY---TPVVSVYSSELISLVHSLLQQDP 241

Query: 409 RKRLSAASVLKHP 421
            KR +A  VL  P
Sbjct: 242 EKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 58.0 bits (141), Expect = 3e-09
 Identities = 55/195 (28%), Positives = 78/195 (40%), Gaps = 53/195 (27%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA--TPLLLTPVGSAEFM 311
           I HRDLK  N+L  +   L   K+CDF L    ++     SPL   T L++T      + 
Sbjct: 127 ILHRDLKTSNLLLNNRGIL---KICDFGLAR--EYG----SPLKPYTQLVVT----LWYR 173

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+    +G  A  Y    D+WS+G +   LL   P F G         + E      +
Sbjct: 174 APEL---LLG--AKEYSTAIDMWSVGCIFAELLTKKPLFPG---------KSEI-DQLNK 218

Query: 372 IL-------------FHSIQQ-GHYDFPEGEWSTI---------SDEAKDLIRRLLVKDA 408
           I              F  +       F +  ++ +         SD   DL+ RLL  D 
Sbjct: 219 IFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDP 278

Query: 409 RKRLSAASVLKHPWI 423
            KR+SA   LKHP+ 
Sbjct: 279 AKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 67/219 (30%)

Query: 56  LGKGAYASVQTCVNILTELEYAVK---IIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
           +G+G ++ V     +L  +  A+K   I D +   +R+   KE++       HPN+I+  
Sbjct: 10  IGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYY 68

Query: 112 LEYYEDDE-------------------------------------------NHERHKRIA 128
             + ED+E                                            H   +R+ 
Sbjct: 69  ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVM 128

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV-HSPLATPLLLTPVGSAEFMAPE 187
           HRD+KP N+          VKL D  LG      T+  HS + TP          +M+PE
Sbjct: 129 HRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY---------YMSPE 176

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 177 RIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 58.5 bits (141), Expect = 3e-09
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 43/201 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H    GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T    
Sbjct: 141 HLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY-- 190

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QR 362
             + APE++         GY +  D+WS+G ++  ++ G   F G    D  W     Q 
Sbjct: 191 --YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQL 241

Query: 363 GETCHACQEILFHSIQQ--------GHYD----FPEGEWSTISD-------EAKDLIRRL 403
           G  C    + L  +++           Y     FP+  +   S+       +A+DL+ ++
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301

Query: 404 LVKDARKRLSAASVLKHPWIS 424
           LV DA KR+S    L+HP+I+
Sbjct: 302 LVIDASKRISVDEALQHPYIN 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 36/167 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           LF   ++GI +RDLK +N++    D    +K+ DF +         +   + T    T  
Sbjct: 114 LFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGM-----CKEHMVDGVTTR---TFC 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+          Y K  D W+ GV++Y +L G PPF    GED        
Sbjct: 163 GTPDYIAPEII------AYQPYGKSVDWWAYGVLLYEMLAGQPPFD---GED-------- 205

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
               ++ LF SI + +  +P+    ++S EA  + + L+ K   KRL
Sbjct: 206 ----EDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPSKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 57.8 bits (140), Expect = 4e-09
 Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 87/232 (37%)

Query: 55  ILGKGAYASVQTCVNILTELE-----YAVKIIDK--------------------LPG--- 86
           +LGKG++  V     +L EL+     YAVK++ K                    L G   
Sbjct: 2   VLGKGSFGKV-----LLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHP 56

Query: 87  -----HS----RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER-------------H 124
                HS    + R+F  +E   +  G   +  +      DE   R             H
Sbjct: 57  FLTQLHSCFQTKDRLFFVME---YVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLH 113

Query: 125 KR-IAHRDLKPENILCVHPDQLSPVKLCDFDL-----GSGIKFNTSVHSPLATPLLLTPV 178
           +R I +RDLK +N+L    D    +K+ DF +       G+  +T   +P          
Sbjct: 114 ERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFCGTP---------- 160

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
              +++APEI+          Y    D W+LGV++Y +L G  PF G+  ED
Sbjct: 161 ---DYIAPEIL------SYQPYGPAVDWWALGVLLYEMLAGQSPFEGD-DED 202

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 58.2 bits (141), Expect = 4e-09
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 25/113 (22%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL---GSGIKFNTSVHSPLATPLLLTP 177
           HE   +I +RDLK +N+L    D    VK+ DF L   G G    TS           T 
Sbjct: 118 HE--NKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFGDRTS-----------TF 161

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
            G+ EF+APE++      E S Y +  D W LGV++Y +L G  PF G+  E+
Sbjct: 162 CGTPEFLAPEVLT-----ETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEE 208

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 36/167 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           LF    +GI +RDLK +N++    D    +K+ DF +        ++   + T    T  
Sbjct: 114 LFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGM-----CKENMWDGVTTK---TFC 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+          Y K  D W+ GV++Y +L G  PF    GED        
Sbjct: 163 GTPDYIAPEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GED-------- 205

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
               ++ LF SI + +  +P+    ++S EA  + + L+ K   KRL
Sbjct: 206 ----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 56.8 bits (137), Expect = 5e-09
 Identities = 56/223 (25%), Positives = 88/223 (39%), Gaps = 63/223 (28%)

Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVK--IIDKLPGHSRSR-------VFKEVETFHH 101
           +KG ++G G++ SV   +N  +    AVK   +  +   S+ R       + +E+     
Sbjct: 3   IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKE 62

Query: 102 CQGHPNIIQLLEYYEDDE----------------------------------------NH 121
            Q H NI+Q L    D +                                        N+
Sbjct: 63  LQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY 121

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN-TSVHSPLATPLLLTPVGS 180
             ++ I HRD+K  NIL    D    +K+ DF +   ++ N  S  +  A P L    GS
Sbjct: 122 LHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKLEANSLSTKTNGARPSLQ---GS 175

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE+V          Y ++ D+WSLG +V  +L G  PF
Sbjct: 176 VFWMAPEVVKQTS------YTRKADIWSLGCLVVEMLTGKHPF 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 57.2 bits (138), Expect = 5e-09
 Identities = 50/220 (22%), Positives = 79/220 (35%), Gaps = 43/220 (19%)

Query: 207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKP 261
           W  G  V  LL  Y  F          +     +  +++L      H  Q  I HRD+K 
Sbjct: 84  WMAGGSVSHLLSKYGAF----------KEAVIINYTEQLLRGLSYLHENQ--IIHRDVKG 131

Query: 262 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 321
            N+L     Q   +++ DF  G+  +         A       +G+  FMAPE++     
Sbjct: 132 ANLLIDSTGQR--LRIADF--GAAARLAAKGTG--AGEFQGQLLGTIAFMAPEVL----- 180

Query: 322 PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGH 381
                Y + CD+WS+G V+  +    PP          W   +  +    I   +     
Sbjct: 181 -RGEQYGRSCDVWSVGCVIIEMATAKPP----------WNAEKHSNHLALIFKIASATTA 229

Query: 382 YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
              PE     +S   +D+  R L      R  +  +LKHP
Sbjct: 230 PSIPE----HLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 57.5 bits (139), Expect = 5e-09
 Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 41/193 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   G+ HRDLKP NIL    ++   +K+CDF L           + +  P +   V +
Sbjct: 125 HS--AGVVHRDLKPSNILI---NENCDLKICDFGL-----------ARIQDPQMTGYVST 168

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCG 359
             + APEI+  +       YD   D+WS G +   +L G P F G           +  G
Sbjct: 169 RYYRAPEIMLTW-----QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLG 223

Query: 360 WQRGETCHA-CQEILFHSIQQGHYDFPEGEWSTIS-------DEAKDLIRRLLVKDARKR 411
               +  +  C E     +Q      P+ E    S         A DL+ ++LV D +KR
Sbjct: 224 TPPDDVINTICSENTLRFVQS----LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279

Query: 412 LSAASVLKHPWIS 424
           +SAA  L HP+++
Sbjct: 280 ISAAEALAHPYLA 292

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 41/200 (20%)

Query: 230 DCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
           + G++ G       EI   L    Q+ I +RDLKPENIL    D    +++ D  L    
Sbjct: 96  EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGL---- 148

Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
               +VH P     +   VG+  +MAPE+V      +   Y    D W+LG ++Y ++ G
Sbjct: 149 ----AVHVP-EGQTIKGRVGTVGYMAPEVV------KNERYTFSPDWWALGCLLYEMIAG 197

Query: 347 YPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVK 406
             PF          QR       ++I    +++   +  E      S +A+ L + LL K
Sbjct: 198 QSPFQ---------QRK------KKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCK 242

Query: 407 DARKRL-----SAASVLKHP 421
           D ++RL      A  V +HP
Sbjct: 243 DPKERLGCQGGGAREVKEHP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 56.9 bits (137), Expect = 8e-09
 Identities = 42/141 (29%), Positives = 60/141 (42%), Gaps = 28/141 (19%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           I +RDLKPENIL    D    V L DF L   G++   +  +   TP         E++A
Sbjct: 117 IIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTFCGTP---------EYLA 164

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH----- 240
           PE++          YD+  D W LG V+Y +L G PPFY     D         H     
Sbjct: 165 PEVL------RKEPYDRTVDWWCLGAVLYEMLYGLPPFY---SRDVSQMYDNILHKPLQL 215

Query: 241 -ACQEILFHSIQQGIAHRDLK 260
              + +    +  G+ H+D +
Sbjct: 216 PGGKTVAACDLLVGLLHKDQR 236

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 56.3 bits (136), Expect = 9e-09
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 19/107 (17%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           RI HRD+KP NIL     Q   +KLCDF           V   L   +  T VG++ +M+
Sbjct: 124 RIMHRDIKPSNILVNSRGQ---IKLCDF----------GVSGELINSIADTFVGTSTYMS 170

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 232
           PE +      +   Y  + D+WSLG+ +  L  G  PF  +  +D G
Sbjct: 171 PERI------QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG 211

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 56.6 bits (136), Expect = 9e-09
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 27/193 (13%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L +  ++ + HRDLKP+N+L     +L   KL DF L       T  +S     L   P 
Sbjct: 117 LNYCHRRKVLHRDLKPQNLLINERGEL---KLADFGLARAKSIPTKTYSNEVVTLWYRP- 172

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------- 357
                  P+I+   +G  ++ Y  + D+W +G + Y +  G P F G+  E+        
Sbjct: 173 -------PDIL---LG--STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRI 220

Query: 358 CGWQRGET---CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
            G    ET     + +E   ++  +   D        +  +  +L+ +LL  + RKR+SA
Sbjct: 221 LGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA 280

Query: 415 ASVLKHPWISTAG 427
              +KHP+    G
Sbjct: 281 EEAMKHPYFHCLG 293

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 56.3 bits (136), Expect = 9e-09
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 37/195 (18%)

Query: 243 QEILF-HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATP 299
           Q ILF HS  + + HRDLKP+N+L    D    +KL DF L    GI      H      
Sbjct: 112 QGILFCHS--RRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPVRVYTHE----- 161

Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                V +  + APE++   +G  +  Y    D+WS+G +   +    P F+G+   D  
Sbjct: 162 -----VVTLWYRAPEVL---LG--SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQL 211

Query: 360 WQRGETCHACQEILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKD 407
           ++         E ++    S+      FP  +W           + ++  DL+ ++L+ D
Sbjct: 212 FRIFRILGTPTEDVWPGVTSLPDYKNTFP--KWKKGSLRSAVKNLDEDGLDLLEKMLIYD 269

Query: 408 ARKRLSAASVLKHPW 422
             KR+SA   L HP+
Sbjct: 270 PAKRISAKKALNHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 32/170 (18%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+K  NIL    D +  VKL DF  G+  +  T     L+   + +  G+  +M+P
Sbjct: 127 IVHRDIKGANIL---RDSVGNVKLGDF--GASKRLQTIC---LSGTGMKSVTGTPYWMSP 178

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++        GY ++ D+WS+G  V  +L   PP          W   E   A  +I 
Sbjct: 179 EVISG------EGYGRKADIWSVGCTVVEMLTEKPP----------WAEFEAMAAIFKI- 221

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             + Q  +   P      +SD  +D ++R+ V +A+ R SA  +L+H ++
Sbjct: 222 --ATQPTNPVLP----PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 55/219 (25%), Positives = 84/219 (38%), Gaps = 58/219 (26%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQL 111
            ++G+GAY  V  C N  T    A+K   +       +    +EV+     + H NI+ L
Sbjct: 7   GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNL 65

Query: 112 LEYYEDD-------ENHER--------------------------------HKR-IAHRD 131
            E +          E  ER                                H   I HRD
Sbjct: 66  KEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD 125

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           +KPENIL     +   +KLCDF       F  ++ +      L   V +  + APE++  
Sbjct: 126 IKPENILV---SESGVLKLCDFG------FARALRAR-PASPLTDYVATRWYRAPELL-- 173

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
            +G   + Y K  D+W++G ++  LL G P F G+   D
Sbjct: 174 -VGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 57.1 bits (138), Expect = 1e-08
 Identities = 55/195 (28%), Positives = 78/195 (40%), Gaps = 50/195 (25%)

Query: 253 GIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N+L    CV       +K+CDF L    + + S H       +   V + 
Sbjct: 123 GILHRDIKPGNLLVNSNCV-------LKICDFGLARVEEPDESKH-------MTQEVVTQ 168

Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------------- 353
            + APEI+   MG  +  Y    D+WS+G +   LL     F                  
Sbjct: 169 YYRAPEIL---MG--SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT 223

Query: 354 -CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD----EAKDLIRRLLVKDA 408
              E           AC+    H ++  H         T+S     EA  L+ R+LV D 
Sbjct: 224 PSLEAMR-------SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDP 276

Query: 409 RKRLSAASVLKHPWI 423
            KR+SAA  L HP++
Sbjct: 277 DKRISAADALAHPYL 291

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 59/229 (25%), Positives = 84/229 (36%), Gaps = 80/229 (34%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVET----FHHCQGHPNII 109
           E +GKG Y  V    N       AVKI+D +     S V +E+E           HPN++
Sbjct: 28  ETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-----SDVDEEIEAEYNILQSLPNHPNVV 82

Query: 110 QLL-EYYEDDE------------------------------------------------N 120
           +    +Y+ D+                                                 
Sbjct: 83  KFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTSVHSPLATPLLL 175
           H  + RI HRD+K  NIL         VKL DF + + +     + NTSV +P       
Sbjct: 143 HLHNNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPF------ 193

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                  +MAPE++      + S YD RCD+WSLG+    L  G PP +
Sbjct: 194 -------WMAPEVIACEQQYDYS-YDARCDVWSLGITAIELGDGDPPLF 234

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 63/219 (28%), Positives = 90/219 (41%), Gaps = 49/219 (22%)

Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H   QG+A        HRD+K  NIL   P Q   VKL DF  GS      S+ SP  + 
Sbjct: 132 HGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ---VKLADF--GSA-----SIASPANSF 181

Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                VG+  +MAPE++ A    +   YD + D+WSLG+    L    PP +        
Sbjct: 182 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 226

Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                        L+H  Q         EW   SD  ++ +   L K  + R ++  +LK
Sbjct: 227 -------MNAMSALYHIAQNESPTLQSNEW---SDYFRNFVDSCLQKIPQDRPTSEELLK 276

Query: 420 HPWISTAGTAHRP-LVTPQVIRRNQSA-RELSSFAESAM 456
           H ++       RP  V   +I+R + A REL +     M
Sbjct: 277 HMFV----LRERPETVLIDLIQRTKDAVRELDNLQYRKM 311

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 56.0 bits (135), Expect = 1e-08
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 35/196 (17%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP N+L     Q   VKLCDF           V + L   +  T VG+  +MAP
Sbjct: 116 ILHRDVKPSNMLVNTRGQ---VKLCDF----------GVSTQLVNSIAKTYVGTNAYMAP 162

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPPFYGNCGEDCGWQRGETCHACQ 370
           E +    G +   Y    D+WSLG+    L  G   YP    N G     Q         
Sbjct: 163 ERI---SGEQ---YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQ--------- 207

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
            +L   + +     P G++   S++    I + + K  ++R +  +++ HP+I      +
Sbjct: 208 -LLQCIVDEDPPVLPVGQF---SEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263

Query: 431 RPLVTPQVIRRNQSAR 446
             +V+  V R  +  R
Sbjct: 264 AEVVSMWVCRALEERR 279

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 62/224 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHP 106
           Y+++ E++GKG+Y  V + ++  T  + A+K I+ +  H    +R+ +E++     + HP
Sbjct: 2   YKIQ-EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR-HP 59

Query: 107 NIIQL------------------LEYYE----------DDENHERHK------------- 125
           +I+++                   E  E          DD   E H+             
Sbjct: 60  DIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYI 119

Query: 126 ---RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSA 181
               + HRDLKP+NIL     +L   K+CDF L   + FN +      T +  T  V + 
Sbjct: 120 HTANVFHRDLKPKNILANADCKL---KICDFGLAR-VAFNDT-----PTAIFWTDYVATR 170

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            + APE+  +F     S Y    D+WS+G +   +L G P F G
Sbjct: 171 WYRAPELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPG 210

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 39/203 (19%)

Query: 225 GNC-GEDCGWQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF 280
           GN   ED         + C+EIL    H     + HRD+K +N+L     + + VKL DF
Sbjct: 115 GNALKEDW------IAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDF 165

Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
            + + +       +        T +G+  +MAPE++     P+A+ YD R D+WSLG+  
Sbjct: 166 GVSAQLDRTVGRRN--------TFIGTPYWMAPEVIACDENPDAT-YDYRSDIWSLGITA 216

Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
             +  G PP    C  D    R          LF   +         +WS    +  D I
Sbjct: 217 IEMAEGAPPL---C--DMHPMRA---------LFLIPRNPPPKLKSKKWSK---KFIDFI 259

Query: 401 RRLLVKDARKRLSAASVLKHPWI 423
              LVK+   R S   +LKHP+I
Sbjct: 260 EGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 34/183 (18%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP+N+L + P+  + +KLCDF          S  + LA    ++ + S  + AP
Sbjct: 191 ICHRDLKPQNLL-IDPNTHT-LKLCDFG---------SAKNLLAGQRSVSYICSRFYRAP 239

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC------------GEDCGWQ 361
           E++   +G  A+ Y    DLWSLG ++  ++ GYP F G              G     Q
Sbjct: 240 ELM---LG--ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQ 294

Query: 362 RGETCHACQEILFHSIQQGHYD--FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
             E      +I F  ++       FP+G      D+A + I + L  +  KRL+    L 
Sbjct: 295 LKEMNPNYADIKFPDVKPKDLKKVFPKG----TPDDAINFISQFLKYEPLKRLNPIEALA 350

Query: 420 HPW 422
            P+
Sbjct: 351 DPF 353

Length = 440

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 40/174 (22%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  NIL         VKL DF + + +     + NTSV +P              +
Sbjct: 147 HRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPF-------------W 190

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++ A      S YD RCD+WSLG+    L  G PP       D    R        
Sbjct: 191 MAPEVI-ACEQQLDSTYDARCDVWSLGITAIELGDGDPPL-----ADLHPMRA------- 237

Query: 371 EILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             LF   +       + E WS    E  D IR+ L KD  KR + + +L+H +I
Sbjct: 238 --LFKIPRNPPPTLHQPELWSN---EFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 57/204 (27%), Positives = 80/204 (39%), Gaps = 40/204 (19%)

Query: 229 EDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG 285
           E+ G+     C    +I   L H  Q+ I +RDLKPEN+L    D    V++ D  L   
Sbjct: 90  ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVE 146

Query: 286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
           +K   S     A        G+  FMAPE++    G E   YD   D ++LGV +Y ++ 
Sbjct: 147 LKDGQSKTKGYA--------GTPGFMAPELL---QGEE---YDFSVDYFALGVTLYEMIA 192

Query: 346 GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLV 405
              PF           RGE      + L   I      +P+      S  +K     LL 
Sbjct: 193 ARGPFR---------ARGEKVE--NKELKQRILNDSVTYPD----KFSPASKSFCEALLA 237

Query: 406 KDARKRL-----SAASVLKHPWIS 424
           KD  KRL     +   +  HP   
Sbjct: 238 KDPEKRLGFRDGNCDGLRTHPLFR 261

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 37/196 (18%)

Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C +    L +   QG+ HRD+K ++IL     +   +KL DF    G     S  
Sbjct: 119 QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR---IKLSDF----GFCAQVSKE 171

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
            P    L    VG+  +MAPE+++         Y    D+WSLG++V  ++ G PP++  
Sbjct: 172 VPKRKSL----VGTPYWMAPEVISRL------PYGTEVDIWSLGIMVIEMIDGEPPYF-- 219

Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPE--GEWSTISDEAKDLIRRLLVKDARKR 411
                            E    ++++   + P    +   +S   +  +  +LV++  +R
Sbjct: 220 ----------------NEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQR 263

Query: 412 LSAASVLKHPWISTAG 427
            +A  +L+HP++  AG
Sbjct: 264 ATAQELLQHPFLKLAG 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 51/199 (25%), Positives = 70/199 (35%), Gaps = 70/199 (35%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFMA 312
           I HRDLKP+NIL V  D    VK+ DF L     F  +          LT  V +  + A
Sbjct: 128 IVHRDLKPQNIL-VTSDG--QVKIADFGLARIYSFEMA----------LTSVVVTLWYRA 174

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++        S Y    D+WS+G +   L    P F G                    
Sbjct: 175 PEVL------LQSSYATPVDMWSVGCIFAELFRRRPLFRG-------------------- 208

Query: 373 LFHSIQQGHYDF------PEGEW-----------------------STISDEAKDLIRRL 403
                 Q    F       E EW                         I +E  DL++++
Sbjct: 209 -TSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKM 267

Query: 404 LVKDARKRLSAASVLKHPW 422
           L  +  KR+SA   L+HP+
Sbjct: 268 LTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 46/226 (20%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H    GI HRDLKP NI+ V  D    +K+ DF L       T+  + + TP ++T    
Sbjct: 138 HLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTACTNFMMTPYVVTRY-- 187

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCG 359
             + APE++         GY +  D+WS+G ++  L+ G   F G           E  G
Sbjct: 188 --YRAPEVILGM------GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLG 239

Query: 360 WQRGETCHACQEILFHSIQQG-------------HYDFP-EGEWSTI-SDEAKDLIRRLL 404
               E  +  Q  + + ++                + FP E E   + + +A+DL+ ++L
Sbjct: 240 TPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKML 299

Query: 405 VKDARKRLSAASVLKHPWIST---AGTAHRPLVTPQVIRRNQSARE 447
           V D  KR+S    L+HP+I+       A  P   PQ+       RE
Sbjct: 300 VIDPDKRISVDEALRHPYITVWYDPAEAEAP--PPQIYDAQLEERE 343

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 14/97 (14%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I +RD+K ENIL    D    V L DF L    +F+             +  G+ E+MAP
Sbjct: 126 IIYRDIKLENILL---DSNGHVVLTDFGLSK--EFHED-----EVERAYSFCGTIEYMAP 175

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +IV    G +  G+DK  D WS+GV++Y LL G  PF
Sbjct: 176 DIVR---GGD-GGHDKAVDWWSMGVLMYELLTGASPF 208

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 54.8 bits (132), Expect = 3e-08
 Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 57/208 (27%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQ----- 110
           +G+G+   V    +  T  + AVK +D      R  +F EV      Q HPNI++     
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HPNIVEMYSSY 85

Query: 111 --------LLEYYE-----DDENHER--------------------HKR-IAHRDLKPEN 136
                   ++E+ E     D   H R                    H + + HRD+K ++
Sbjct: 86  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDS 145

Query: 137 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 196
           IL     +   VKL DF    G     S   P    L    VG+  +MAPE+++      
Sbjct: 146 ILLTSDGR---VKLSDF----GFCAQVSKEVPRRKSL----VGTPYWMAPEVISR----- 189

Query: 197 ASGYDKRCDLWSLGVVVYILLCGYPPFY 224
              Y    D+WSLG++V  ++ G PP++
Sbjct: 190 -LPYGTEVDIWSLGIMVIEMVDGEPPYF 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 17/108 (15%)

Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
           DE H R  ++ HRDLK  NI  + P  +  +KL DF  G   +++ SV   +A+    TP
Sbjct: 183 DEVHSR--KMMHRDLKSANIFLM-PTGI--IKLGDF--GFSKQYSDSVSLDVASSFCGTP 235

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
                ++APE+       E   Y K+ D+WSLGV++Y LL  + PF G
Sbjct: 236 Y----YLAPELW------ERKRYSKKADMWSLGVILYELLTLHRPFKG 273

Length = 478

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 55.4 bits (134), Expect = 3e-08
 Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 33/189 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRDLKP NI  V+ D    +K+ DF L           +      +   V +
Sbjct: 135 HS--AGIIHRDLKPSNI-AVNED--CELKILDFGL-----------ARHTDDEMTGYVAT 178

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             + APEI+  +M      Y++  D+WS+G ++  LL G   F G+   D   +      
Sbjct: 179 RWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVG 233

Query: 368 ACQEILFHSIQ--------QGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAA 415
              E L   I         Q     P+ ++  +    +  A DL+ ++LV D  KR++AA
Sbjct: 234 TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA 293

Query: 416 SVLKHPWIS 424
             L HP+++
Sbjct: 294 EALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 55.3 bits (133), Expect = 3e-08
 Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 31/182 (17%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N L V+ D    +K+ DF L              A   +   V +  + A
Sbjct: 137 GIIHRDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRA 182

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PE++  +M      Y++  D+WS+G ++  +L G   F G    D         G    E
Sbjct: 183 PEVILNWM-----HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                ++    S  +    +P  ++ST+    S +A DL+ ++L  D  KRL+A   L+H
Sbjct: 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297

Query: 421 PW 422
           P+
Sbjct: 298 PY 299

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 40/174 (22%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF----NTSVHSPLATPLLLTPVGSAE 309
           I HRD+K  NIL    D    VKL DF     I+      T + S   TP          
Sbjct: 127 IVHRDIKGANIL---RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPY--------- 174

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           +M+PE+++        GY ++ D+WS+   V  +L   PP          W   E   A 
Sbjct: 175 WMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPP----------WAEYEAMAAI 218

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            +I   + Q      P+G    +SD  +D ++++ V++ R R +A  +L+HP++
Sbjct: 219 FKI---ATQPTKPMLPDG----VSDACRDFLKQIFVEEKR-RPTAEFLLRHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 61/213 (28%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL 111
           + E +G+GA  +V T +++ T  E A+K ++      +  +  E+      + HPNI+  
Sbjct: 23  RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-HPNIVNY 81

Query: 112 LEYYEDDEN-----------------------------------------HERHKRIAHR 130
           L+ Y   +                                          H     + HR
Sbjct: 82  LDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHR 139

Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           D+K +NIL         VKL DF   + I    S  S        T VG+  +MAPE+V 
Sbjct: 140 DIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAPEVVT 188

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                    Y  + D+WSLG++   ++ G PP+
Sbjct: 189 R------KAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 52/189 (27%), Positives = 74/189 (39%), Gaps = 50/189 (26%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTSVHSPLATPL 300
           L H     I HRD+K  NIL         VKL DF + + +     + NTSV +P     
Sbjct: 141 LQHLHNNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPF---- 193

Query: 301 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW 360
                    +MAPE++      + S YD RCD+WSLG+    L  G PP +         
Sbjct: 194 ---------WMAPEVIACEQQYDYS-YDARCDVWSLGITAIELGDGDPPLFD-------- 235

Query: 361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAK------DLIRRLLVKDARKRLSA 414
                         H ++   +  P     T+    K        I + L+KD   R S 
Sbjct: 236 -------------MHPVKT-LFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSV 281

Query: 415 ASVLKHPWI 423
             +L+HP+I
Sbjct: 282 THLLEHPFI 290

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 55.4 bits (133), Expect = 4e-08
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 16/106 (15%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLKP+N+L + P+  + +KLCDF          S  + LA    ++ + S  + 
Sbjct: 189 KFICHRDLKPQNLL-IDPNTHT-LKLCDFG---------SAKNLLAGQRSVSYICSRFYR 237

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           APE++   +G  A+ Y    DLWSLG ++  ++ GYP F G    D
Sbjct: 238 APELM---LG--ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD 278

Length = 440

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 54.1 bits (130), Expect = 4e-08
 Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 68/213 (31%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
           K  ++G+GA+  V  C     +    +K I  +++    R     E +       HPNII
Sbjct: 4   KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS-HPNII 62

Query: 110 QLLEYYED-------------------------------DE--------------NHERH 124
              EYYE+                               DE              +H   
Sbjct: 63  ---EYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT 119

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK +NIL      +  VK+ DF    GI    S  S        T VG+  ++
Sbjct: 120 KLILHRDLKTQNILLDKHKMV--VKIGDF----GISKILSSKSKAY-----TVVGTPCYI 168

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
           +PE+       E   Y+++ D+W+LG V+Y L 
Sbjct: 169 SPELC------EGKPYNQKSDIWALGCVLYELA 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 4e-08
 Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 43/193 (22%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             GI HRD+K  NIL    +    +KL DF L    +  T  +S   T  ++T      +
Sbjct: 118 SNGILHRDIKGSNILI---NNDGVLKLADFGLA---RPYTKRNSADYTNRVIT----LWY 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-----------CG 359
             PE++   +G  A+ Y    D+WS+G ++  L  G P F    G             CG
Sbjct: 168 RPPELL---LG--ATRYGPEVDMWSVGCILAELFLGKPIF---QGSTELEQLEKIFELCG 219

Query: 360 ------WQRGETCHACQEILFHSIQQ-GHYD--FPEGEWSTISDEAKDLIRRLLVKDARK 410
                 W         +   F +++    Y     E     I   A DL+ +LL  D +K
Sbjct: 220 SPTDENWPG-----VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKK 274

Query: 411 RLSAASVLKHPWI 423
           R+SA   L+H + 
Sbjct: 275 RISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 43/217 (19%)

Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HRD+K +NIL         VKL DF   + I    S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQS 171

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S +        VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 172 KRSTM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261

Query: 412 LSAASVLKHPWISTAGTAHRPL--VTPQVIRRNQSAR 446
            SA  +L+H ++  A    +PL  +TP +    ++ +
Sbjct: 262 GSAKELLQHQFLKIA----KPLSSLTPLIAAAKEATK 294

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 55.5 bits (133), Expect = 5e-08
 Identities = 78/321 (24%), Positives = 123/321 (38%), Gaps = 81/321 (25%)

Query: 248 HSIQQG-----IAHRDLKPENI-----------LCVHPDQLS--PV-KLCDFDLGSGIKF 288
           H+++ G     + HRDLKP+NI           +    + L+  P+ K+ DF L   I  
Sbjct: 135 HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI 194

Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            +  HS + TP          + +PE+    +  E   YD + D+W+LG ++Y L  G  
Sbjct: 195 ESMAHSCVGTPY---------YWSPEL----LLHETKSYDDKSDMWALGCIIYELCSGKT 241

Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
           PF+            +  +  Q  L   +++G    P+      S E   LI+ LL   A
Sbjct: 242 PFH------------KANNFSQ--LISELKRG----PDLPIKGKSKELNILIKNLLNLSA 283

Query: 409 RKRLSAASVLKHPWISTAGTAHR---------PLVTPQVIRRNQSARELSSFAESAMSAN 459
           ++R SA   L +  I   G                   V RRN S +E      +AM   
Sbjct: 284 KERPSALQCLGYQIIKNVGPPVGAAGGGAGVAAAPGAVVARRNPS-KEHPGLQLAAMEKA 342

Query: 460 RVILQHFSICKNPKDEQWLATPTNMRLSPPSESLLVQR--RQRLQSQSQSDNLASAGQCG 517
                     K+ +         N  +SP   +L+ QR   Q  +  S   +  SA    
Sbjct: 343 ----------KHAEA-------ANYGISP--NTLINQRNEEQHGRRSSSCASRQSANNVT 383

Query: 518 NSASGSSVVNVQSLLAKLVTP 538
           N  S +SV +V S+ +    P
Sbjct: 384 NITSITSVTSVASVASVASVP 404

Length = 1021

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 38/188 (20%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSA 308
           +  + HRDLKP+N+L     +L   KL DF L    GI  NT              V + 
Sbjct: 118 ENRVLHRDLKPQNLLINKRGEL---KLADFGLARAFGIPVNT----------FSNEVVTL 164

Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            + AP+++   +G     Y    D+WS+G ++  ++ G P F G   ED   +       
Sbjct: 165 WYRAPDVL---LGSRT--YSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGT 219

Query: 369 CQEILFHSIQQGHYDFPEGE--------------WSTISDEAKDLIRRLLVKDARKRLSA 414
             E  +  I Q     PE +              +        DL+ RLL  +   R+SA
Sbjct: 220 PTESTWPGISQ----LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISA 275

Query: 415 ASVLKHPW 422
              L+HPW
Sbjct: 276 HDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 53.4 bits (128), Expect = 7e-08
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 27/170 (15%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+K  N++ + P+ +  +KL DF  G   +          + +L +  G+  +MAP
Sbjct: 123 VVHRDIKGNNVMLM-PNGI--IKLIDF--GCARRLAWVGLHGTHSNMLKSMHGTPYWMAP 177

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++N       SGY ++ D+WS+G  V+ +  G PP              +   A    +
Sbjct: 178 EVINE------SGYGRKSDIWSIGCTVFEMATGKPP----------LASMDRLAA----M 217

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           F+ I       P     + S  A D +   L +D  +R SA  +L+H ++
Sbjct: 218 FY-IGAHRGLMPRLP-DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 53.4 bits (128), Expect = 7e-08
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 39/185 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D     G+  + S   P A+      V
Sbjct: 110 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 156

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D        
Sbjct: 157 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 204

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
                    H I +           + S E + L+  LL +D  +RL      A  V +H
Sbjct: 205 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255

Query: 421 PWIST 425
           P+  +
Sbjct: 256 PFFRS 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 52.9 bits (127), Expect = 9e-08
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)

Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H   K+I HRD+K  N+     D    VK+ D     G+    S ++  A     T VG
Sbjct: 115 AHLHSKKILHRDIKSLNLFLDAYDN---VKIGDL----GVAKLLSDNTNFAN----TIVG 163

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +  +++PE+       E   Y+++ D+W+LGVV+Y    G  PF
Sbjct: 164 TPYYLSPELC------EDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 53.5 bits (128), Expect = 9e-08
 Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 49/211 (23%)

Query: 244 EILFHSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +I  + I +G+A        HRDLKP+N+L    ++   +KL DF L       T  +S 
Sbjct: 107 KIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSN 163

Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
               L   P        P+++   +G  +S Y  + D+W +G + + +  G P F G+  
Sbjct: 164 EVVTLWYRP--------PDVL---LG--SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV 210

Query: 356 EDCGWQRGETCHACQEILFHSIQQG-----------HYDFPE-------GEWSTISDEAK 397
           ED         H    +L    ++            +Y+FP+            +  E  
Sbjct: 211 ED-------ELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGI 263

Query: 398 DLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +L+ + L  +++KR+SA   +KH +  + GT
Sbjct: 264 ELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 28/131 (21%)

Query: 94  KEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDF 153
           +EVE    C G    +Q L Y         H+RI HRD+K  NIL   P     VKL DF
Sbjct: 113 QEVEIAAICHG---ALQGLAYLHS------HERI-HRDIKAGNILLTEPGT---VKLADF 159

Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 213
             GS      S+ SP  +      VG+  +MAPE++ A    +   YD + D+WSLG+  
Sbjct: 160 --GSA-----SLVSPANSF-----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITC 204

Query: 214 YILLCGYPPFY 224
             L    PP +
Sbjct: 205 IELAERKPPLF 215

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 18/103 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
               +RI +RDLKPENIL    D    +++ D  L   I    ++            VG+
Sbjct: 117 DLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGETIRG---------RVGT 164

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE+V          Y    D W LG ++Y ++ G  PF
Sbjct: 165 VGYMAPEVVK------NERYTFSPDWWGLGCLIYEMIEGKSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 52.8 bits (126), Expect = 1e-07
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)

Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
           +H    ++ HRD+K +N+L     + + VKL DF + + +       +        T +G
Sbjct: 125 SHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRN--------TFIG 173

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +  +MAPE++     P+A+ YD + DLWSLG+    +  G PP 
Sbjct: 174 TPYWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 52.7 bits (126), Expect = 1e-07
 Identities = 58/225 (25%), Positives = 79/225 (35%), Gaps = 74/225 (32%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQLL 112
           E +GKG Y  V   +N     + AVKI+D  P H     +  E         HPN+++  
Sbjct: 24  ETIGKGTYGKVFKVLNKKNGSKAAVKILD--PIHDIDEEIEAEYNILKALSDHPNVVKFY 81

Query: 113 E-YYEDDE------------------------------------------------NHER 123
             YY+ D                                                  H  
Sbjct: 82  GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH 141

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTSVHSPLATPLLLTPV 178
             +  HRD+K  NIL         VKL DF + + +     + NTSV +P          
Sbjct: 142 VNKTIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPF--------- 189

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
               +MAPE++ A      S YD RCD+WSLG+    L  G PP 
Sbjct: 190 ----WMAPEVI-ACEQQLDSTYDARCDVWSLGITAIELGDGDPPL 229

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 45/174 (25%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 124 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      + S YD + D+WSLG+    L  G PP       D    R        
Sbjct: 168 MAPEVI------KQSAYDFKADIWSLGITAIELAKGEPPN-----SDLHPMR-------- 208

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            +LF  I +      EG++S      K+ +   L KD R R +A  +LKH +I+
Sbjct: 209 -VLF-LIPKNSPPTLEGQYSK---PFKEFVEACLNKDPRFRPTAKELLKHKFIT 257

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 51/180 (28%), Positives = 72/180 (40%), Gaps = 29/180 (16%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP N+L    +    VK+ DF +    +       P  +      VG+  +M+P
Sbjct: 189 IVHRDIKPSNLLI---NSAKNVKIADFGVS---RILAQTMDPCNSS-----VGTIAYMSP 237

Query: 314 EIVNAFMGPEASGYDKRC-DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           E +N  +   A  YD    D+WSLGV +     G  PF    G    W     C  C   
Sbjct: 238 ERINTDLNHGA--YDGYAGDIWSLGVSILEFYLGRFPF--GVGRQGDWA-SLMCAICMS- 291

Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
                       PE   +T S E +  I   L ++  KR SA  +L+HP+I  A      
Sbjct: 292 ----------QPPEAP-ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQ 340

Length = 353

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 22/106 (20%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           +I HRD+KP N+L     Q   VKLCDF           V + L   +  T VG+  +MA
Sbjct: 115 KILHRDVKPSNMLVNTRGQ---VKLCDF----------GVSTQLVNSIAKTYVGTNAYMA 161

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPPFYGNCG 228
           PE +    G +   Y    D+WSLG+    L  G   YP    N G
Sbjct: 162 PERI---SGEQ---YGIHSDVWSLGISFMELALGRFPYPQIQKNQG 201

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 53.6 bits (128), Expect = 2e-07
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 27/131 (20%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENI-----------LCVHPDQLS--PV-KLCDF 153
           ++  L Y  + ++    +R+ HRDLKP+NI           +    + L+  P+ K+ DF
Sbjct: 127 LLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDF 186

Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 213
            L   I   +  HS + TP          + +PE+    +  E   YD + D+W+LG ++
Sbjct: 187 GLSKNIGIESMAHSCVGTPY---------YWSPEL----LLHETKSYDDKSDMWALGCII 233

Query: 214 YILLCGYPPFY 224
           Y L  G  PF+
Sbjct: 234 YELCSGKTPFH 244

Length = 1021

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 49/219 (22%)

Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H   QG+A        HRD+K  NIL   P     VKL DF  GS      S+ +P    
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGL---VKLGDF--GSA-----SIMAPANXF 171

Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                VG+  +MAPE++ A    +   YD + D+WSLG+    L    PP +        
Sbjct: 172 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 216

Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                        L+H  Q        G W   S+  ++ +   L K  + R ++  +LK
Sbjct: 217 -------MNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 266

Query: 420 HPWISTAGTAHRPL-VTPQVIRRNQSA-RELSSFAESAM 456
           H ++       RP  V   +I+R + A REL +     M
Sbjct: 267 HRFVLR----ERPPTVIMDLIQRTKDAVRELDNLQYRKM 301

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 55/220 (25%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           ++ + + GE LG GA+  V    N  T +  A K+ID            E++    C  H
Sbjct: 4   EEFWEIIGE-LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 61

Query: 106 PNIIQLLE--YYEDDE---------------------------------------NHERH 124
           PNI++LL+  YYE++                                        N+   
Sbjct: 62  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE 121

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            +I HRDLK  NIL         +KL DF  G   K   ++    +       +G+  +M
Sbjct: 122 NKIIHRDLKAGNILFTLDGD---IKLADF--GVSAKNTRTIQRRDSF------IGTPYWM 170

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           APE+V      +   YD + D+WSLG+ +  +    PP +
Sbjct: 171 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAQIEPPHH 209

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 52/173 (30%), Positives = 72/173 (41%), Gaps = 45/173 (26%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L         VKL DF +      + IK NT V +P              +
Sbjct: 124 HRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      + S YD + D+WSLG+    L  G PP       D    R        
Sbjct: 168 MAPEVI------QQSAYDSKADIWSLGITAIELAKGEPP-----NSDMHPMR-------- 208

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            +LF  I + +     GE+S      K+ I   L KD   R +A  +LKH +I
Sbjct: 209 -VLFL-IPKNNPPTLTGEFSK---PFKEFIDACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 52.5 bits (126), Expect = 2e-07
 Identities = 46/188 (24%), Positives = 69/188 (36%), Gaps = 31/188 (16%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
             HRDL P NI     +     K+ DF L    ++    +S   +          E M  
Sbjct: 140 FMHRDLSPANIFI---NSKGICKIADFGLAR--RYGYPPYSDTLSKDETM--QRREEMTS 192

Query: 314 EIVNA-FMGPE----ASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------------C 354
           ++V   +  PE    A  Y    D+WS+G +   LL G P F G                
Sbjct: 193 KVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGT 252

Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
             +  W + +      E      +     FP       SD+A DL++ LL  +  +R+SA
Sbjct: 253 PNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNA-----SDDAIDLLQSLLKLNPLERISA 307

Query: 415 ASVLKHPW 422
              LKH +
Sbjct: 308 KEALKHEY 315

Length = 335

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 56/202 (27%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + H  + G+ HRDLKP+N+L     Q   +K+ D  LG       S+           PV
Sbjct: 123 VAHCHKHGVMHRDLKPQNLLV--DKQKGLLKIADLGLGR----AFSI-----------PV 165

Query: 306 GSAE-------FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
            S         + APE++   +G  ++ Y    D+WS+G +   +    P F G    D 
Sbjct: 166 KSYTHEIVTLWYRAPEVL---LG--STHYSTPVDIWSVGCIFAEMSRKQPLFPG----DS 216

Query: 359 GWQR---------GETCHACQEIL----FHSIQQGH-----YDFPEGEWSTISDEAKDLI 400
             Q+           T      +     +H   Q          P      +S E  DL+
Sbjct: 217 ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVP-----DLSPEGLDLL 271

Query: 401 RRLLVKDARKRLSAASVLKHPW 422
           +++L  D  KR+SA + L HP+
Sbjct: 272 QKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 51.5 bits (123), Expect = 3e-07
 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 12/103 (11%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H    ++ HRD+K +N+L     + + VKL DF + + +       +        T +G+
Sbjct: 136 HLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRN--------TFIGT 184

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE++     P+A+ YD R D+WSLG+    +  G PP 
Sbjct: 185 PYWMAPEVIACDENPDAT-YDYRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 52.3 bits (126), Expect = 3e-07
 Identities = 51/221 (23%), Positives = 84/221 (38%), Gaps = 74/221 (33%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKL------PGHSRSRVFKEVETFHHCQGHPNII 109
           +G GAY  V +  +  T  + A+K   KL        H++ R ++E+    H   H N+I
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIK---KLSRPFQSAIHAK-RTYRELRLLKHMD-HENVI 77

Query: 110 QLLEYYEDDENHE--------------------RHKR----------------------- 126
            LL+ +    + E                    + ++                       
Sbjct: 78  GLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA 137

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I HRDLKP NI  V+ D    +K+ DF L           +      +   V +  + A
Sbjct: 138 GIIHRDLKPSNI-AVNED--CELKILDFGL-----------ARHTDDEMTGYVATRWYRA 183

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PEI+  +M      Y++  D+WS+G ++  LL G   F G+
Sbjct: 184 PEIMLNWM-----HYNQTVDIWSVGCIMAELLTGKTLFPGS 219

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 18/104 (17%)

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           + KRI HRDL P NI+    D+   V + DF L    +  + + S          VG+  
Sbjct: 131 KEKRIVHRDLTPNNIMLGEDDK---VTITDFGLAKQKQPESKLTS---------VVGTIL 178

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +  PEIV      +   Y ++ D+W+ G ++Y +    PPFY  
Sbjct: 179 YSCPEIV------KNEPYGEKADVWAFGCILYQMCTLQPPFYST 216

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 52.0 bits (125), Expect = 3e-07
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 44/196 (22%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 138 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 185

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
           PE++   +G    GY +  D+WS+G ++  ++ G   F G    D  W     Q G    
Sbjct: 186 PEVI---LG---MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGTPSD 238

Query: 368 ACQEILFHSI---------QQGH-YD--FPEGEWSTISDE--------AKDLIRRLLVKD 407
                L  ++           G+ ++  FP+  +   S+         A+DL+ ++LV D
Sbjct: 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID 298

Query: 408 ARKRLSAASVLKHPWI 423
             KR+S    L+HP+I
Sbjct: 299 PEKRISVDDALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 51.4 bits (124), Expect = 4e-07
 Identities = 59/231 (25%), Positives = 86/231 (37%), Gaps = 75/231 (32%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVK----IIDKLPGHSRSRVFKEVETFHHCQG 104
           Y L  + +G GAY  V + V+  T  + A+K    + D L      R+ +E++   H + 
Sbjct: 2   YELL-KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL--IDAKRILREIKLLRHLR- 57

Query: 105 HPNIIQLL------------------EYYEDDEN----------HERHKR---------- 126
           H NII LL                  E  E D +           +  +           
Sbjct: 58  HENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLK 117

Query: 127 ------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                 + HRDLKP NIL    C        +K+CDF L  G+               LT
Sbjct: 118 YLHSANVIHRDLKPSNILVNSNCD-------LKICDFGLARGVD------PDEDEKGFLT 164

Query: 177 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             V +  + APE++   +    S Y K  D+WS+G +   LL   P F G 
Sbjct: 165 EYVVTRWYRAPELL---LSS--SRYTKAIDIWSVGCIFAELLTRKPLFPGR 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 23/118 (19%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVH 166
           I++ L+Y  D++       I HRD+K +N+L    +  S V K+ DF         TS  
Sbjct: 117 ILEGLKYLHDNQ-------IVHRDIKGDNVLV---NTYSGVVKISDF--------GTSKR 158

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                P   T  G+ ++MAPE+++   GP   GY    D+WSLG  +  +  G PPF 
Sbjct: 159 LAGINPCTETFTGTLQYMAPEVIDK--GPR--GYGAPADIWSLGCTIVEMATGKPPFI 212

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 19/109 (17%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV-HSPLATPLLLTP 304
           L H   + + HRD+KP N+          VKL D  LG      T+  HS + TP     
Sbjct: 119 LEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY---- 171

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                +M+PE ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 172 -----YMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 42/224 (18%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H    GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T    
Sbjct: 134 HLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY-- 183

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCG 359
             + APE++         GY +  D+WS+G ++       IL  G  Y   +    E  G
Sbjct: 184 --YRAPEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235

Query: 360 WQRGETCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLL 404
               E     Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++L
Sbjct: 236 TPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 295

Query: 405 VKDARKRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           V D  KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 296 VIDPAKRISVDEALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 339

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 51.3 bits (123), Expect = 5e-07
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 35/135 (25%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSA 181
           HK+ I +RDLK +N+L    D+   +K+ DF +    +       +   TP         
Sbjct: 113 HKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFCGTP--------- 160

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 241
           +++APEI+      +   Y++  D WS GV++Y +L G  PF+G   ED           
Sbjct: 161 DYIAPEIL------KGQKYNESVDWWSFGVLLYEMLIGQSPFHG-EDED----------- 202

Query: 242 CQEILFHSIQQGIAH 256
               LF SI     H
Sbjct: 203 ---ELFDSILNDRPH 214

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 51.2 bits (122), Expect = 5e-07
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 19/107 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV-HSPLATPLLLTPVG 306
           H   + + HRD+KP N+          VKL D  LG      T+  HS + TP       
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPY------ 171

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
              +M+PE ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 172 ---YMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 51.2 bits (123), Expect = 5e-07
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 41/205 (20%)

Query: 233 WQ--RG-ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           +Q  RG E CH+            I HRD+KPENIL     Q   VKLCDF       F 
Sbjct: 107 FQILRGIEFCHS----------HNIIHRDIKPENILV---SQSGVVKLCDFG------FA 147

Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
            ++ +P    +    V +  + APE++   +G   + Y +  D+W++G +V  +L G P 
Sbjct: 148 RTLAAP--GEVYTDYVATRWYRAPELL---VGD--TKYGRAVDIWAVGCLVTEMLTGEPL 200

Query: 350 FYGNCGEDCGWQ----RGETCHACQEI-----LFHSIQQGHYDFPEG---EWSTISDEAK 397
           F G+   D  +      G      QEI     LF  ++       E     +  +S    
Sbjct: 201 FPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVL 260

Query: 398 DLIRRLLVKDARKRLSAASVLKHPW 422
           DL ++ L  D   R S++ +L H +
Sbjct: 261 DLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 50.7 bits (122), Expect = 6e-07
 Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 68/223 (30%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKEVETFHHCQGHP 106
           Y++ G+I G+G ++ V    +  T   YA+K + K    S  +V   +E++       HP
Sbjct: 1   YKILGKI-GEGTFSEVLKAQSRKTGKYYAIKCM-KKHFKSLEQVNNLREIQALRRLSPHP 58

Query: 107 NIIQLLEYYED-------------DEN-----------------------------HERH 124
           NI++L+E   D             D N                             H   
Sbjct: 59  NILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR 118

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             I HRD+KPENIL +  D L   KL DF  GS       ++S    P     + +  + 
Sbjct: 119 NGIFHRDIKPENIL-IKDDIL---KLADF--GSC----RGIYS---KPPYTEYISTRWYR 165

Query: 185 APE--IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           APE  + + + GP+        D+W++G V + +L  +P F G
Sbjct: 166 APECLLTDGYYGPKM-------DIWAVGCVFFEILSLFPLFPG 201

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 50.7 bits (121), Expect = 7e-07
 Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 71/224 (31%)

Query: 52  KGEILGKGAYASV---------------------------------QTCVNILTELEYAV 78
           KGE+LGKGAY +V                                 Q  V++L  L++ V
Sbjct: 4   KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH-V 62

Query: 79  KIIDKL----------------PGHSRSRVFKEVETFHH---CQGHPNIIQLLEYYEDDE 119
            I+  L                PG S S +            C+    I+  + Y  ++ 
Sbjct: 63  NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122

Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
                  + HRD+K  N++ + P+ +  +KL DF  G   +          + +L +  G
Sbjct: 123 -------VVHRDIKGNNVMLM-PNGI--IKLIDF--GCARRLAWVGLHGTHSNMLKSMHG 170

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +  +MAPE++N       SGY ++ D+WS+G  V+ +  G PP 
Sbjct: 171 TPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPL 208

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 50.7 bits (121), Expect = 7e-07
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 18/110 (16%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H  ++ + +RDLKP NIL    D+   V++ D     G+  + S   P A+      VG+
Sbjct: 112 HMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VGT 158

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
             +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 159 HGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 50.6 bits (121), Expect = 7e-07
 Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 37/159 (23%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDL P NI+    D+   V + DF L    +  + + S          VG+  +  P
Sbjct: 135 IVHRDLTPNNIMLGEDDK---VTITDFGLAKQKQPESKLTSV---------VGTILYSCP 182

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           EIV      +   Y ++ D+W+ G ++Y +    PPFY                     L
Sbjct: 183 EIV------KNEPYGEKADVWAFGCILYQMCTLQPPFYST---------------NMLSL 221

Query: 374 FHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKR 411
              I +  Y+  PEG +   S++  D+I   L  DA  R
Sbjct: 222 ATKIVEAVYEPLPEGMY---SEDVTDVITSCLTPDAEAR 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 50.3 bits (120), Expect = 7e-07
 Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 34/178 (19%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + I HRD+K +NI       ++  KL DF  G   + N S        L  T V
Sbjct: 114 LKHIHDRKILHRDIKSQNIFLSKNGMVA--KLGDF--GIARQLNDS------MELAYTCV 163

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +++PEI       +   Y+ + D+WSLG V+Y L     PF GN            
Sbjct: 164 GTPYYLSPEIC------QNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL------V 211

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
              CQ   F  I               S + + LI +L     R R S  S+LK P++
Sbjct: 212 LKICQG-YFAPISPNF-----------SRDLRSLISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 51.2 bits (122), Expect = 7e-07
 Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 48/139 (34%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVH---------- 293
           + G  HRD+KP+NIL    D+   +KL DF L +G +       + +  H          
Sbjct: 119 KMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSN 175

Query: 294 --------------SPLATP--------LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 331
                          PL           L  + VG+  ++APE++        +GY + C
Sbjct: 176 EWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLC 229

Query: 332 DLWSLGVVVYILLCGYPPF 350
           D WS+GV++Y +L G PPF
Sbjct: 230 DWWSVGVILYEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 50.2 bits (120), Expect = 8e-07
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 17/99 (17%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + I HRDLK +NIL      +  VK+ DF    GI    S  S        T V
Sbjct: 114 LHHVHTKLILHRDLKTQNILLDKHKMV--VKIGDF----GISKILSSKSKAY-----TVV 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
           G+  +++PE+       E   Y+++ D+W+LG V+Y L 
Sbjct: 163 GTPCYISPELC------EGKPYNQKSDIWALGCVLYELA 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 33/128 (25%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           H + I +RDLK +N++    D    +K+ DF +    K N  +     T    T  G+ +
Sbjct: 118 HSKGIIYRDLKLDNVML---DAEGHIKIADFGM---CKEN--IFGGKTTR---TFCGTPD 166

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 242
           ++APEI+ A+       Y K  D W+ GV++Y +L G PPF    GED            
Sbjct: 167 YIAPEII-AY-----QPYGKSVDWWAFGVLLYEMLAGQPPFD---GED------------ 205

Query: 243 QEILFHSI 250
           ++ LF SI
Sbjct: 206 EDELFQSI 213

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 49.8 bits (120), Expect = 1e-06
 Identities = 53/214 (24%), Positives = 81/214 (37%), Gaps = 59/214 (27%)

Query: 56  LGKGAYASVQTCVNILTELEYAVK-IIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE- 113
           LG G + SV    N  T    A+K +  K          +EV++      HPNI++L E 
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEV 66

Query: 114 YYEDDENH----------------ERHKRIA------------------------HRDLK 133
           + E+DE +                 + K  +                        HRDLK
Sbjct: 67  FRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLK 126

Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L   P+    VK+ DF L   I+         + P     V +  + APEI+    
Sbjct: 127 PENLLVSGPEV---VKIADFGLAREIR---------SRPPYTDYVSTRWYRAPEIL---- 170

Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
              ++ Y    D+W+LG ++  L    P F G+ 
Sbjct: 171 -LRSTSYSSPVDIWALGCIMAELYTLRPLFPGSS 203

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 18/101 (17%)

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           + +RI +RDLKPENIL    D    +++ D  L   I    +V            VG+  
Sbjct: 119 QRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVRG---------RVGTVG 166

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +MAPE++N         Y    D W LG ++Y ++ G  PF
Sbjct: 167 YMAPEVIN------NEKYTFSPDWWGLGCLIYEMIQGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 50.1 bits (119), Expect = 1e-06
 Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 57/209 (27%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
           E +G+GA  +V T ++I T  E A+K ++      +  +  E+      + +PNI+  L+
Sbjct: 25  EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLD 83

Query: 114 -YYEDDE--------------------------------------NHERHKRIAHRDLKP 134
            Y   DE                                      +     ++ HRD+K 
Sbjct: 84  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKS 143

Query: 135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
           +NIL         VKL DF   + I    S  S        T VG+  +MAPE+V     
Sbjct: 144 DNILL---GMDGSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAPEVVTR--- 189

Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                Y  + D+WSLG++   ++ G PP+
Sbjct: 190 ---KAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 24/116 (20%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
           II  LE       H   +RI +RDLKPEN+L    D    V++ D  L   +K   S   
Sbjct: 106 IISGLE-------HLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTK 155

Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             A        G+  FMAPE++    G E   YD   D ++LGV +Y ++    PF
Sbjct: 156 GYA--------GTPGFMAPELL---QGEE---YDFSVDYFALGVTLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 49.7 bits (118), Expect = 1e-06
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 27/99 (27%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
           HRD+K  N+L         VKL DF +      + IK NT V +P              +
Sbjct: 124 HRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 167

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 168 MAPEVI------QQSAYDSKADIWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 1e-06
 Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 51/202 (25%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS    + HRDLKP N+L    C        +K+CDF L + I      H+   T     
Sbjct: 123 HS--ANVLHRDLKPSNLLLNTNC-------DLKICDFGL-ARIADPEHDHTGFLTEY--- 169

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN---------- 353
            V +  + APEI+         GY K  D+WS+G ++  +L   P F G           
Sbjct: 170 -VATRWYRAPEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL 223

Query: 354 ------CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRL 403
                   ED             + L           P+  W+ +      +A DL+ ++
Sbjct: 224 GVLGTPSQEDLNCIISLRARNYIKSLPFK--------PKVPWNKLFPNADPKALDLLDKM 275

Query: 404 LVKDARKRLSAASVLKHPWIST 425
           L  +  KR++    L HP++  
Sbjct: 276 LTFNPHKRITVEEALAHPYLEQ 297

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 36/173 (20%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK +NI      + + +K+ DF    G+         LAT    TP     +
Sbjct: 124 QRRILHRDLKAKNIFL----KNNLLKIGDF----GVSRLLMGSCDLATTFTGTP----YY 171

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           M+PE +      +  GYD + D+WSLG ++Y + C    F G                  
Sbjct: 172 MSPEAL------KHQGYDSKSDIWSLGCILYEMCCLAHAFEG--------------QNFL 211

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            ++   ++      PE    T S +   +++ +L KD   R SAA +L++P+I
Sbjct: 212 SVVLRIVEGPTPSLPE----TYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 34/167 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D     G+  + S   P A+      V
Sbjct: 110 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 156

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      + + YD   D +SLG +++ LL G+ PF           R   
Sbjct: 157 GTHGYMAPEVLQ-----KGTAYDSSADWFSLGCMLFKLLRGHSPF-----------RQHK 200

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                EI   ++   + + P+    + S E K L+  LL +D  KRL
Sbjct: 201 TKDKHEIDRMTLTV-NVELPD----SFSPELKSLLEGLLQRDVSKRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 18/103 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H  ++ + +RDLKP NIL    D+   V++ D     G+  + S   P A+      VG+
Sbjct: 112 HMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VGT 158

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE++      + + YD   D +SLG +++ LL G+ PF
Sbjct: 159 HGYMAPEVLQ-----KGTAYDSSADWFSLGCMLFKLLRGHSPF 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 42/197 (21%)

Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLA 297
             + QG+A        HRDLKP+N+L    +    +KL DF L    G+   T  H    
Sbjct: 107 FQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE--- 160

Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                  V +  + APEI+   +G +   Y    D+WSLG +   ++     F G+   D
Sbjct: 161 -------VVTLWYRAPEIL---LGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEID 208

Query: 358 CGWQRGETCHACQEILFHSIQQ-GHY--DFPEGEWS---------TISDEAKDLIRRLLV 405
             ++   T     E+++  +     Y   FP  +W+          + ++ +DL+ ++L 
Sbjct: 209 QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP--KWARQDFSKVVPPLDEDGRDLLSQMLH 266

Query: 406 KDARKRLSAASVLKHPW 422
            D  KR+SA + L HP+
Sbjct: 267 YDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 51/224 (22%), Positives = 76/224 (33%), Gaps = 69/224 (30%)

Query: 52  KGEILGKGAYASVQ----TCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQG 104
            G+ LG+GA+  V            E+E AVK +      S        +E         
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTL--KEDASEQQIEEFLREARIMRKLD- 59

Query: 105 HPNIIQLL-------------EYYE----DD--ENHERH--------------------- 124
           HPNI++LL             EY       D    +                        
Sbjct: 60  HPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119

Query: 125 --KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             K   HRDL   N L V  + +  VK+ DF L S   ++   +      L   P+    
Sbjct: 120 ESKNFIHRDLAARNCL-VGENLV--VKISDFGL-SRDLYDDDYYKVKGGKL---PI---R 169

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
           +MAPE +          +  + D+WS GV+++ I   G  P+ G
Sbjct: 170 WMAPESLKEGK------FTSKSDVWSFGVLLWEIFTLGEEPYPG 207

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 49/194 (25%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP----VG 306
           ++ I HRDLKP+N+L     +L   KL DF L       T  +S     L   P    +G
Sbjct: 121 KRKILHRDLKPQNLLINEKGEL---KLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG 177

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           S E+  P                  D+W +G ++Y +  G P F G+  +       E  
Sbjct: 178 STEYSTP-----------------IDMWGVGCILYEMATGRPMFPGSTVK-------EEL 213

Query: 367 HACQEILFHSIQQG-----------HYDFPE-------GEWSTISDEAKDLIRRLLVKDA 408
           H    +L    ++             Y FP+            +  +  DL+  LL+ + 
Sbjct: 214 HLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYET 273

Query: 409 RKRLSAASVLKHPW 422
           + R+SA + L+H +
Sbjct: 274 KSRISAEAALRHSY 287

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 34/181 (18%)

Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPL 300
            C  +  HS+   I +RD+KPEN+L    D     +L D  L   +K   ++        
Sbjct: 105 TCGILHLHSM--DIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQ------ 153

Query: 301 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW 360
                G+  +MAPEI+      +   Y    D +++G  +Y ++ G  PF          
Sbjct: 154 ---RAGTNGYMAPEIL------KEEPYSYPVDWFAMGCSIYEMVAGRTPF---------- 194

Query: 361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
            +       +E L     +    F   E    ++E+KD+ R  L K    RL +      
Sbjct: 195 -KDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250

Query: 421 P 421
           P
Sbjct: 251 P 251

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 50/228 (21%), Positives = 76/228 (33%), Gaps = 78/228 (34%)

Query: 52  KGEILGKGAYASVQ----TCVNILTELEYAVKIIDKLPGHS----RSRVFKEVETFHHCQ 103
            G+ LG+GA+  V            ++E AVK    L   +         +E        
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVK---TLKEDASEQQIEEFLREARIMRKLD 59

Query: 104 GHPNIIQLL-------------EYYE----DD---ENHER-------------------- 123
            HPN+++LL             EY E         +N  +                    
Sbjct: 60  -HPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYL 118

Query: 124 -HKRIAHRDLKPENILCVHPDQLSPVKLCDF----DLGSGIKFNTSVHSPLATPLLLTPV 178
             K   HRDL   N L V  + +  VK+ DF    DL     +       L       P+
Sbjct: 119 ESKNFIHRDLAARNCL-VGENLV--VKISDFGLSRDLYDD-DYYRKRGGKL-------PI 167

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
               +MAPE +          +  + D+WS GV+++ I   G  P+ G
Sbjct: 168 ---RWMAPESLKEGK------FTSKSDVWSFGVLLWEIFTLGEQPYPG 206

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 15/97 (15%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I +RD+K ENIL    D    V L DF L    +F +            +  G+ E+MAP
Sbjct: 126 IVYRDIKLENILL---DSEGHVVLTDFGLSK--EFLSE-----EKERTYSFCGTIEYMAP 175

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           EI+         G+ K  D WSLG++++ LL G  PF
Sbjct: 176 EIIRG-----KGGHGKAVDWWSLGILIFELLTGASPF 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 17/99 (17%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I +RDLK +N+L  H       KL DF +     FN    S        T  G+ +++
Sbjct: 115 KGIIYRDLKLDNVLLDHEGH---CKLADFGMCKEGIFNGKTTS--------TFCGTPDYI 163

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APEI+   +      Y    D W++GV++Y +LCG+ PF
Sbjct: 164 APEILQEML------YGPSVDWWAMGVLLYEMLCGHAPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 18/96 (18%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRD+K  NIL   P Q   VKL DF  GS      S  SP  +      VG+  +MAPE+
Sbjct: 144 HRDIKAGNILLTEPGQ---VKLADF--GSA-----SKSSPANSF-----VGTPYWMAPEV 188

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           + A    +   YD + D+WSLG+    L    PP +
Sbjct: 189 ILAM---DEGQYDGKVDVWSLGITCIELAERKPPLF 221

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 27/104 (25%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVG 179
           +R  HRD+K  N+L     +   VKL DF +      + IK NT V +P           
Sbjct: 120 ERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF---------- 166

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
              +MAPE++      + S YD + D+WSLG+    L  G PP 
Sbjct: 167 ---WMAPEVI------KQSAYDFKADIWSLGITAIELAKGEPPN 201

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 55/241 (22%), Positives = 80/241 (33%), Gaps = 78/241 (32%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYA---VKIIDKLPGHSRSR-------------- 91
           Y  KG  LG+G Y  V+   + LT    A   VKII+     ++ R              
Sbjct: 10  YIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLR 69

Query: 92  ---VFKEVETFHHCQGHPNIIQLLEYY--EDDEN-------------------------- 120
              +  E++       H NI+ L++ Y   D  N                          
Sbjct: 70  ELKIMNEIK-------HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVK 122

Query: 121 ----------HERHKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 169
                     +  HK    HRDL P NI     +     K+ DF L    ++    +S  
Sbjct: 123 CILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKIADFGLAR--RYGYPPYSDT 177

Query: 170 ATPLLLTPVGSAEFMAPEIVNA-FMGPE----ASGYDKRCDLWSLGVVVYILLCGYPPFY 224
            +          E M  ++V   +  PE    A  Y    D+WS+G +   LL G P F 
Sbjct: 178 LSKDETM--QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235

Query: 225 G 225
           G
Sbjct: 236 G 236

Length = 335

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 16/106 (15%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H   ++I HRD+K +NI       ++  KL DF  G   + N S        L  T VG+
Sbjct: 116 HIHDRKILHRDIKSQNIFLSKNGMVA--KLGDF--GIARQLNDS------MELAYTCVGT 165

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             +++PEI       +   Y+ + D+WSLG V+Y L     PF GN
Sbjct: 166 PYYLSPEIC------QNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 48/134 (35%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-------FNTSVH--------------- 166
           HRD+KP+NIL    D+   +KL DF L +G +       + +  H               
Sbjct: 124 HRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDP 180

Query: 167 ---------SPLATP--------LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 209
                     PL           L  + VG+  ++APE++        +GY + CD WS+
Sbjct: 181 ANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLCDWWSV 234

Query: 210 GVVVYILLCGYPPF 223
           GV++Y +L G PPF
Sbjct: 235 GVILYEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 48/200 (24%), Positives = 74/200 (37%), Gaps = 44/200 (22%)

Query: 254 IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
           + HRDLKP NIL +    +   VK+ D  L          ++PL     L P V +  + 
Sbjct: 129 VLHRDLKPANILVMGEGPERGVVKIGDLGLAR------LFNAPLKPLADLDPVVVTIWYR 182

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE++   +G  A  Y K  D+W++G +   LL   P F     E    +         E
Sbjct: 183 APELL---LG--ARHYTKAIDIWAIGCIFAELLTLEPIFK--GREAKIKKSNPFQRDQLE 235

Query: 372 ILFH------------------------SIQQGHYDFPE-----GEWSTISDEAKDLIRR 402
            +F                           +   Y          +      +  DL+R+
Sbjct: 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRK 295

Query: 403 LLVKDARKRLSAASVLKHPW 422
           LL  D  KR++A   L+HP+
Sbjct: 296 LLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 40/174 (22%)

Query: 254 IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I H D+K EN+L     D+   + LCD+ L   I    S +            G+ ++ +
Sbjct: 130 IIHNDIKLENVLYDRAKDR---IYLCDYGL-CKIIGTPSCYD-----------GTLDYFS 174

Query: 313 PE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           PE I           YD   D W++GV+ Y LL G  PF  +  E+             E
Sbjct: 175 PEKIKGHN-------YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD----------LE 217

Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-ASVLKHPWIS 424
            L    QQ    F       +S  A D ++ +L  +   RL+    ++KHP++ 
Sbjct: 218 SL-LKRQQKKLPFI----KNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266

Length = 267

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 49.7 bits (118), Expect = 2e-06
 Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 31/184 (16%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N + V+ D    +++ DF L              A   +   V +  + A
Sbjct: 138 GIIHRDLKPSN-VAVNED--CELRILDFGLARQ-----------ADDEMTGYVATRWYRA 183

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+  +M      Y++  D+WS+G ++  LL G   F GN   D   +  E        
Sbjct: 184 PEIMLNWM-----HYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238

Query: 373 LFHSIQQGHYD--------FPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
           +   I   H           P+ +   I    +  A DL+ ++LV D+ KR+SA+  L H
Sbjct: 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298

Query: 421 PWIS 424
           P+ S
Sbjct: 299 PYFS 302

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 30/190 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRD+K  NIL  +   L   K+ DF L            P   P      G+ ++
Sbjct: 133 ENHILHRDIKAANILIDNQGIL---KIADFGLARPY------DGPPPNPKGGGGGGTRKY 183

Query: 311 MAPEIVNAFMGPEASGYDKR----CDLWSLGVVVYILLCGYPPFYGNCGED--------C 358
               +   +  PE    ++R     D+W +G V   +    P   G    D        C
Sbjct: 184 TNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243

Query: 359 G------WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
           G      W    +   C+ +   +         E  +  +  E  DL+ +LL  D  KRL
Sbjct: 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTL---EERFGKLGPEGLDLLSKLLSLDPYKRL 300

Query: 413 SAASVLKHPW 422
           +A+  L+HP+
Sbjct: 301 TASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 18/103 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
               +RI +RDLKPENIL    D    +++ D  L        +VH P     +   VG+
Sbjct: 117 DLHQERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVP-EGQTIKGRVGT 164

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE+V      +   Y    D W+LG ++Y ++ G  PF
Sbjct: 165 VGYMAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 18/96 (18%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRD+K  NIL   P Q   VKL DF  GS      S+ SP  +      VG+  +MAPE+
Sbjct: 148 HRDIKAGNILLTEPGQ---VKLADF--GSA-----SIASPANSF-----VGTPYWMAPEV 192

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           + A    +   YD + D+WSLG+    L    PP +
Sbjct: 193 ILAM---DEGQYDGKVDVWSLGITCIELAERKPPLF 225

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 52/184 (28%), Positives = 72/184 (39%), Gaps = 38/184 (20%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPENIL     Q   VKL DF    G+    S    L TP+++T      + AP
Sbjct: 129 IVHRDLKPENILVTSGGQ---VKLADF----GLARIYSCQMAL-TPVVVT----LWYRAP 176

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++        S Y    D+WS+G +   +    P F GN   D      +       I 
Sbjct: 177 EVL------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD------QLGKIFDLIG 224

Query: 374 FHSIQQGHYD--FPEGEWS------------TISDEAKDLIRRLLVKDARKRLSAASVLK 419
                    D   P G +S             I +    L+  +L  +  KR+SA   L+
Sbjct: 225 LPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284

Query: 420 HPWI 423
           HP+ 
Sbjct: 285 HPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 49.5 bits (118), Expect = 3e-06
 Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 37/168 (22%)

Query: 256 HRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 314
           HRD+K  NIL C +      VKL DF  G    +  +V   +      TP     ++APE
Sbjct: 166 HRDIKSANILLCSN----GLVKLGDF--GFSKMYAATVSDDVGRTFCGTPY----YVAPE 215

Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 374
           I           Y K+ D++SLGV++Y LL    PF    GE+            +E++ 
Sbjct: 216 IW------RRKPYSKKADMFSLGVLLYELLTLKRPFD---GEN-----------MEEVM- 254

Query: 375 HSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
           H    G YD  P     +IS E ++++  LL  D ++R S++ +L  P
Sbjct: 255 HKTLAGRYDPLP----PSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298

Length = 496

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 48.9 bits (117), Expect = 3e-06
 Identities = 52/218 (23%), Positives = 75/218 (34%), Gaps = 67/218 (30%)

Query: 242 CQEILF---------HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           CQ  L+         HS    + HRDLKP N+L      L   K+CDF L          
Sbjct: 110 CQYFLYQLLRGLKYIHS--ANVLHRDLKPSNLLLNANCDL---KICDFGLAR-------- 156

Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNA-FMGPE----ASGYDKRCDLWSLGVVVYILLCGY 347
                     T     +FM   +V   +  PE     S Y    D+WS+G +   LL   
Sbjct: 157 ----------TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRK 206

Query: 348 PPFYGNCGEDC-----------GWQRGETCHACQEILFHSIQQGHY----------DFPE 386
           P F    G+D            G    E           + +   Y           F  
Sbjct: 207 PLFP---GKDYVHQLKLITELLGSPSEEDLG-----FIRNEKARRYIRSLPYTPRQSFAR 258

Query: 387 GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             +   +  A DL+ ++LV D  KR++    L HP+++
Sbjct: 259 -LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 49.1 bits (117), Expect = 3e-06
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           RI HRD+K ENI     DQ     +C  DLG+          P+  P  L   G+ E  A
Sbjct: 177 RIIHRDVKTENIFINDVDQ-----VCIGDLGAA-------QFPVVAPAFLGLAGTVETNA 224

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
           PE++          Y+ + D+WS G+V++ +L  YP
Sbjct: 225 PEVL------ARDKYNSKADIWSAGIVLFEML-AYP 253

Length = 357

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 48.5 bits (115), Expect = 4e-06
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 19/99 (19%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRD+K ++IL  H  +   VKL DF    G     S   P    L    VG+  +MAP
Sbjct: 137 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKSL----VGTPYWMAP 185

Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           E+++    GPE        D+WSLG++V  ++ G PP++
Sbjct: 186 ELISRLPYGPEV-------DIWSLGIMVIEMVDGEPPYF 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 59/225 (26%), Positives = 85/225 (37%), Gaps = 70/225 (31%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNIIQL 111
           E LG+G YA+V    N  T    A+K I  D   G + S   +E+      + H NI++L
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG-TPSTAIREISLMKELK-HENIVRL 63

Query: 112 -------------LEYYEDDEN-------------------------------HERHKRI 127
                         EY + D                                 HE   R+
Sbjct: 64  HDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE--NRV 121

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            HRDLKP+N+L     +L   KL DF L    GI  NT              V +  + A
Sbjct: 122 LHRDLKPQNLLINKRGEL---KLADFGLARAFGIPVNT----------FSNEVVTLWYRA 168

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           P+++   +G     Y    D+WS+G ++  ++ G P F G   ED
Sbjct: 169 PDVL---LGSRT--YSTSIDIWSVGCIMAEMITGRPLFPGTNNED 208

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 44/195 (22%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL V+      +KLCDF + SG      +   +A     + VG+  +M+P
Sbjct: 121 IMHRDVKPSNIL-VNSR--GEIKLCDFGV-SG-----QLIDSMAN----SFVGTRSYMSP 167

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YP-------------PFYGNCGEDCG 359
           E +      + + Y  + D+WSLG+ +  +  G YP                 + GE   
Sbjct: 168 ERL------QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKE 221

Query: 360 WQRGETCH--------ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
             R  + H        A  E+L + + +     P G     SDE +D + + L K+ ++R
Sbjct: 222 SHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSG---AFSDEFQDFVDKCLKKNPKER 278

Query: 412 LSAASVLKHPWISTA 426
                + KHP+I  A
Sbjct: 279 ADLKELTKHPFIKRA 293

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 48.5 bits (115), Expect = 4e-06
 Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 38/210 (18%)

Query: 230 DCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS 284
           D G    +    C+++L      HS++  I HRDLK  N+L         +KL DF + +
Sbjct: 104 DRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLT---LDGDIKLADFGVSA 158

Query: 285 -GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL 343
             +K      S + TP          +MAPE+V      +   YD + D+WSLG+ +  +
Sbjct: 159 KNVKTLQRRDSFIGTPY---------WMAPEVVMCETMKDTP-YDYKADIWSLGITLIEM 208

Query: 344 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
               PP +               +  + +L  +  +        +WS    E +D ++  
Sbjct: 209 AQIEPPHH-------------ELNPMRVLLKIAKSEPPTLSQPSKWSM---EFRDFLKTA 252

Query: 404 LVKDARKRLSAASVLKHPWISTAGTAHRPL 433
           L K    R SAA +L+HP++S+  T++RPL
Sbjct: 253 LDKHPETRPSAAQLLEHPFVSSV-TSNRPL 281

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H   KR+ HRD+K +NI      Q   VKL DF  GS       + SP A     T VG
Sbjct: 114 QHIHEKRVLHRDIKSKNIFLT---QNGKVKLGDF--GSA----RLLTSPGA--YACTYVG 162

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +  ++ PEI       E   Y+ + D+WSLG ++Y L     PF  N
Sbjct: 163 TPYYVPPEIW------ENMPYNNKSDIWSLGCILYELCTLKHPFQAN 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 14/101 (13%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
            + HRDLKP+NIL     +L   K+CDF L   + FN +      T +  T  V +  + 
Sbjct: 123 NVFHRDLKPKNILANADCKL---KICDFGLAR-VAFNDT-----PTAIFWTDYVATRWYR 173

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           APE+  +F     S Y    D+WS+G +   +L G P F G
Sbjct: 174 APELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPG 210

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 48.7 bits (116), Expect = 5e-06
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 19/98 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            Q I HRD+K ENI     DQ     +C  DLG+          P+  P  L   G+ E 
Sbjct: 175 AQRIIHRDVKTENIFINDVDQ-----VCIGDLGAA-------QFPVVAPAFLGLAGTVET 222

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            APE++          Y+ + D+WS G+V++ +L  YP
Sbjct: 223 NAPEVL------ARDKYNSKADIWSAGIVLFEML-AYP 253

Length = 357

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 47.8 bits (113), Expect = 6e-06
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 24/115 (20%)

Query: 109 IQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 168
           +Q LE+   ++       + HRD+K +NIL         VKL DF   + I    S  S 
Sbjct: 126 LQALEFLHSNQ-------VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRST 175

Query: 169 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +        VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+
Sbjct: 176 M--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 6e-06
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 21/102 (20%)

Query: 129 HRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           HRDLKP N+L    C        +K+CDF L + I      H+   T      V +  + 
Sbjct: 129 HRDLKPSNLLLNTNC-------DLKICDFGL-ARIADPEHDHTGFLTEY----VATRWYR 176

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           APEI+         GY K  D+WS+G ++  +L   P F G 
Sbjct: 177 APEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPLFPGK 213

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 44/146 (30%)

Query: 84  LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPD 143
            P   RS +++ ++  H C  H N                   I HRD+KPEN+L  H D
Sbjct: 98  PPEKVRSYIYQLIKAIHWC--HKN------------------DIVHRDIKPENLLISHND 137

Query: 144 QLSPVKLCDF----DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG 199
            L   KLCDF    +L  G   N + +           V +  + +PE++   +G   + 
Sbjct: 138 VL---KLCDFGFARNLSEGSNANYTEY-----------VATRWYRSPELL---LG---AP 177

Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYG 225
           Y K  D+WS+G ++  L  G P F G
Sbjct: 178 YGKAVDMWSVGCILGELSDGQPLFPG 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 48.1 bits (114), Expect = 6e-06
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 48/139 (34%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN---------TSVHSPLATP-- 299
           + G  HRD+KP+NIL    D    +KL DF L +G ++          + +      P  
Sbjct: 119 KMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSD 175

Query: 300 ----------------------------LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 331
                                       L  + VG+  ++APE++         GY + C
Sbjct: 176 LWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVL------LRKGYTQLC 229

Query: 332 DLWSLGVVVYILLCGYPPF 350
           D WS+GV+++ +L G PPF
Sbjct: 230 DWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 47.7 bits (114), Expect = 6e-06
 Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 32/182 (17%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    D+   +KL DF L    G+   T  H           V +  + 
Sbjct: 120 VLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVRTYTHE----------VVTLWYR 166

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G  +  Y    D+WS+G +   ++   P F G+   D  ++   T     E
Sbjct: 167 APEIL---LG--SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDE 221

Query: 372 ILFHSIQQGHYDF-------PEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            ++  +     D+          + S +     ++  DL+ ++LV D  KR+SA + L+H
Sbjct: 222 DVWPGVTS-LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280

Query: 421 PW 422
           P+
Sbjct: 281 PY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 47.7 bits (113), Expect = 7e-06
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 32/127 (25%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I +RDLK +NIL    D    +K+ DF +           + L      T  G+ +++
Sbjct: 115 KGIVYRDLKLDNILL---DTDGHIKIADFGMCK--------ENMLGDAKTCTFCGTPDYI 163

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
           APEI+   +G +   Y+   D WS GV++Y +L G  PF+G+  E+              
Sbjct: 164 APEIL---LGQK---YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE-------------- 203

Query: 245 ILFHSIQ 251
            LF SI+
Sbjct: 204 -LFQSIR 209

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 47.9 bits (114), Expect = 7e-06
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 20/109 (18%)

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSA 181
           RH  I +RDLK +NIL    D     KL DF +   GI    +  +   TP         
Sbjct: 114 RHGVI-YRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFCGTP--------- 160

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +++APEI+      +   Y    D W+LGV++Y ++ G PPF  +  +D
Sbjct: 161 DYIAPEIL------QELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 47.4 bits (112), Expect = 7e-06
 Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 39/193 (20%)

Query: 237 ETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           +  +  +E L   ++   +G  HRD+K  NIL         VKL DF + + I    +  
Sbjct: 107 QIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH---VKLADFGVSAQITATIAKR 163

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                      +G+  +MAPE+          GY++ CD+W++G+    L    PP +  
Sbjct: 164 KSF--------IGTPYWMAPEVAAV---ERKGGYNQLCDIWAVGITAIELAELQPPMF-- 210

Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFP----EGEWSTISDEAKDLIRRLLVKDAR 409
                        H  + +    + + ++  P    + +W   S+     ++  L K+ +
Sbjct: 211 -----------DLHPMRALFL--MTKSNFQPPKLKDKMKW---SNSFHHFVKMALTKNPK 254

Query: 410 KRLSAASVLKHPW 422
           KR +A  +L+HP+
Sbjct: 255 KRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 47.7 bits (113), Expect = 8e-06
 Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 36/210 (17%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            I HRDLKP N L V+ D    +K+ DF L        + +           V +  + A
Sbjct: 140 DIIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRA 185

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PEI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E
Sbjct: 186 PEIMLNWM-----HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 240

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                      +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H
Sbjct: 241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300

Query: 421 PWISTAGTAHRPLVTPQVIRRNQS--AREL 448
            + +     H P   P     +QS  +R+L
Sbjct: 301 AYFA---QYHDPDDEPVADPYDQSFESRDL 327

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 47.4 bits (112), Expect = 9e-06
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           ++ HRD+K +N+L         VKL DF   + I    S  S        T VG+  +MA
Sbjct: 135 QVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMA 183

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE+V          Y  + D+WSLG++   ++ G PP+
Sbjct: 184 PEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 46.9 bits (111), Expect = 9e-06
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 20/105 (19%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H+R  RI HRDLK +NI      + + +K+ DF    G+         LAT    TP   
Sbjct: 123 HQR--RILHRDLKAKNIFL----KNNLLKIGDF----GVSRLLMGSCDLATTFTGTP--- 169

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             +M+PE +      +  GYD + D+WSLG ++Y + C    F G
Sbjct: 170 -YYMSPEAL------KHQGYDSKSDIWSLGCILYEMCCLAHAFEG 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 14/97 (14%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K  NIL    D    VKL DF  G+  +  T   S      + +  G+  +M+P
Sbjct: 127 IVHRDIKGANIL---RDSAGNVKLGDF--GASKRLQTICMSGTG---IRSVTGTPYWMSP 178

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E+++        GY ++ D+WSLG  V  +L   PP+
Sbjct: 179 EVISG------EGYGRKADVWSLGCTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 18/105 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
               +   +RDLKPENIL    D    +++ D  L   I    S+            VG+
Sbjct: 117 DLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRG---------RVGT 164

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             +MAPE++N         Y    D W LG ++Y ++ G  PF G
Sbjct: 165 VGYMAPEVLN------NQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 46.8 bits (112), Expect = 1e-05
 Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 24/120 (20%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
           ++QLL        H     I HRDLK  N+L  +   L   K+CDF L    ++     S
Sbjct: 112 MLQLLS----GVAHLHDNWILHRDLKTSNLLLNNRGIL---KICDFGLAR--EYG----S 158

Query: 168 PLA--TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           PL   T L++T      + APE+    +G  A  Y    D+WS+G +   LL   P F G
Sbjct: 159 PLKPYTQLVVT----LWYRAPEL---LLG--AKEYSTAIDMWSVGCIFAELLTKKPLFPG 209

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 56/229 (24%), Positives = 80/229 (34%), Gaps = 84/229 (36%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
           G++LG+GA+  V  C +  T  E AVK +   P    +   KEV     C+     IQLL
Sbjct: 7   GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETS--KEVNALE-CE-----IQLL 58

Query: 113 ---------EYYEDDENHERHK-------------------------------------- 125
                    +YY    + E  K                                      
Sbjct: 59  KNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQG 118

Query: 126 -------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF----NTSVHSPLATPLL 174
                   I HRD+K  NIL    D    VKL DF     I+      T + S   TP  
Sbjct: 119 VSYLHSNMIVHRDIKGANIL---RDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPY- 174

Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                   +M+PE+++        GY ++ D+WS+   V  +L   PP+
Sbjct: 175 --------WMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 17/108 (15%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           H+R + HRDLKP+N+L    ++   +KL DF L       T  +S     L   P     
Sbjct: 121 HRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRP----- 172

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
              P+++   +G  +S Y  + D+W +G + + +  G P F G+  ED
Sbjct: 173 ---PDVL---LG--SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 18/96 (18%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRD+K  NIL   P     VKL DF  GS      S+ +P         VG+  +MAPE+
Sbjct: 138 HRDVKAGNILLSEPGL---VKLGDF--GSA-----SIMAPANXF-----VGTPYWMAPEV 182

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           + A    +   YD + D+WSLG+    L    PP +
Sbjct: 183 ILAM---DEGQYDGKVDVWSLGITCIELAERKPPLF 215

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 52/220 (23%), Positives = 81/220 (36%), Gaps = 57/220 (25%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           +++ + GE LG GA+  V    N  T    A K+I+            E+E    C  HP
Sbjct: 12  EVWEIIGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN-HP 69

Query: 107 NIIQLLE-YYEDDE----------------------------------------NHERHK 125
            I++LL  +Y D +                                         +    
Sbjct: 70  YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEFM 184
           +I HRDLK  N+L         +KL DF + +  +K      S + TP          +M
Sbjct: 130 KIIHRDLKAGNVLLT---LDGDIKLADFGVSAKNVKTLQRRDSFIGTPY---------WM 177

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           APE+V      +   YD + D+WSLG+ +  +    PP +
Sbjct: 178 APEVVMCETMKDTP-YDYKADIWSLGITLIEMAQIEPPHH 216

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 37/172 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H  ++ + HRD+K +NI      Q   VKL DF  GS       + SP A     T VG+
Sbjct: 115 HIHEKRVLHRDIKSKNIFLT---QNGKVKLGDF--GSA----RLLTSPGA--YACTYVGT 163

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             ++ PEI       E   Y+ + D+WSLG ++Y L     PF  N      W+      
Sbjct: 164 PYYVPPEIW------ENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKN----- 207

Query: 368 ACQEILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                L   + QG Y   P    S  S E + LI+++  ++ R R SA ++L
Sbjct: 208 -----LILKVCQGSYKPLP----SHYSYELRSLIKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 55/227 (24%), Positives = 87/227 (38%), Gaps = 69/227 (30%)

Query: 52  KGEILGKGAYASVQTCVNILTEL--EYAVK-------------IIDKLPGHSRSRVFKEV 96
           K ++L +   A V+   +IL E   E+ VK             ++D +PG     +   +
Sbjct: 36  KKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM 95

Query: 97  ETFHHCQGHPNIIQLLEYYEDDENHERHKR-IAHRDLKPENILCVHPDQLSPVKLCDFDL 155
           E F        I +L    E       HK    HRD+KP+NIL    D    +KL DF L
Sbjct: 96  EVFPEVLARFYIAELTLAIE-----SVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGL 147

Query: 156 GSGIKFN---------TSVHSPLATP------------------------------LLLT 176
            +G ++          + +      P                              L  +
Sbjct: 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHS 207

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
            VG+  ++APE++         GY + CD WS+GV+++ +L G PPF
Sbjct: 208 LVGTPNYIAPEVL------LRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 47/211 (22%), Positives = 73/211 (34%), Gaps = 59/211 (27%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYY 115
           +G G Y  V    N+ T    A+K+I   PG   + V +E+     C+ H NI+     Y
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK-HSNIVAYFGSY 75

Query: 116 EDDEN------------------------------------------HERHKRIAHRDLK 133
              +                                           H + K   HRD+K
Sbjct: 76  LRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGK--MHRDIK 133

Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
             NIL         VKL DF + + I    +             +G+  +MAPE+     
Sbjct: 134 GANILLTDNGH---VKLADFGVSAQITATIAKRKSF--------IGTPYWMAPEVAAV-- 180

Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                GY++ CD+W++G+    L    PP +
Sbjct: 181 -ERKGGYNQLCDIWAVGITAIELAELQPPMF 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 47.4 bits (112), Expect = 1e-05
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 35/179 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   G++   +  +   TP          
Sbjct: 114 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP---------N 161

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+          Y    D W+LGV+++ ++ G  PF      D   Q  E     
Sbjct: 162 YIAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE----- 210

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPW 422
            + LF  I +     P     ++S +A  +++  L KD ++RL        A +  HP+
Sbjct: 211 -DYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 264

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 51/212 (24%), Positives = 76/212 (35%), Gaps = 61/212 (28%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYY 115
           +G G Y  V    N+ T    AVKII   PG   S + +E+     C+ H NI+     Y
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK-HCNIVAYFGSY 75

Query: 116 EDDEN------------------------------------------HERHKRIAHRDLK 133
              E                                           H + K   HRD+K
Sbjct: 76  LSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGK--MHRDIK 133

Query: 134 PENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
             NIL   + D    VKL DF + + I    +             +G+  +MAPE+    
Sbjct: 134 GANILLTDNGD----VKLADFGVAAKITATIAKRKSF--------IGTPYWMAPEVAAV- 180

Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
              +  GY++ CD+W++G+    L    PP +
Sbjct: 181 --EKNGGYNQLCDIWAVGITAIELAELQPPMF 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 31/184 (16%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N L V+ D    +K+ DF L                  +   V +  + A
Sbjct: 138 GIIHRDLKPGN-LAVNED--CELKILDFGLARQ-----------TDSEMTGYVVTRWYRA 183

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PE++  +M      Y +  D+WS+G ++  +L G P F G+   D         G    E
Sbjct: 184 PEVILNWMH-----YTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                Q     +  +    F + ++ ++    +  A +++ ++LV DA  R++AA  L H
Sbjct: 239 FVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298

Query: 421 PWIS 424
           P+  
Sbjct: 299 PYFE 302

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 17/102 (16%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I +RDLK +N++    D+   +K+ DF +     F  +  S        T  G+ +++
Sbjct: 115 KGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRAS--------TFCGTPDYI 163

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           APEI+          Y    D WS GV++Y +L G  PF+G+
Sbjct: 164 APEILQGLK------YTFSVDWWSFGVLLYEMLIGQSPFHGD 199

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 14/97 (14%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K  NIL    D +  VKL DF  G+  +  T     L+   + +  G+  +M+P
Sbjct: 127 IVHRDIKGANIL---RDSVGNVKLGDF--GASKRLQTIC---LSGTGMKSVTGTPYWMSP 178

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E+++        GY ++ D+WS+G  V  +L   PP+
Sbjct: 179 EVISG------EGYGRKADIWSVGCTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 66/220 (30%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVF-----KEVETFHHCQGHPNI 108
             +G+G Y  V    N  T    A+K   K+   +    F     +E++     + HPNI
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALK---KIRMENEKEGFPITAIREIKLLQKLR-HPNI 60

Query: 109 IQL---------------LEYYEDD-----ENHERH----------------------KR 126
           ++L                EY + D     ++ E                          
Sbjct: 61  VRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG 120

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K  NIL    +    +KL DF L    +  T  +S   T  ++T      +  P
Sbjct: 121 ILHRDIKGSNILI---NNDGVLKLADFGLA---RPYTKRNSADYTNRVIT----LWYRPP 170

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E++   +G  A+ Y    D+WS+G ++  L  G P F G+
Sbjct: 171 ELL---LG--ATRYGPEVDMWSVGCILAELFLGKPIFQGS 205

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 24/107 (22%)

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP----VG 179
            ++I HRDLKP+N+L     +L   KL DF L       T  +S     L   P    +G
Sbjct: 121 KRKILHRDLKPQNLLINEKGEL---KLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLG 177

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           S E+  P                  D+W +G ++Y +  G P F G+
Sbjct: 178 STEYSTP-----------------IDMWGVGCILYEMATGRPMFPGS 207

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 21/101 (20%)

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
           E+HK I HRD+KP NIL V+      +KLCDF + SG      +   +A     + VG+ 
Sbjct: 117 EKHK-IMHRDVKPSNIL-VNSR--GEIKLCDFGV-SG-----QLIDSMAN----SFVGTR 162

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YP 221
            +M+PE +      + + Y  + D+WSLG+ +  +  G YP
Sbjct: 163 SYMSPERL------QGTHYTVQSDIWSLGLSLVEMAIGRYP 197

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 47.5 bits (113), Expect = 2e-05
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 26/116 (22%)

Query: 242 CQEILF-HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF----------DLGSGIKFNT 290
           C  I + HS  +G+ HRDLKP+NIL         V + D+          +    I  + 
Sbjct: 123 CATIEYVHS--KGVLHRDLKPDNILL---GLFGEVVILDWGAAIFKKLEEEDLLDIDVDE 177

Query: 291 --SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
               +S +  P  +  VG+ ++MAPE     +G  AS   +  D+++LGV++Y +L
Sbjct: 178 RNICYSSMTIPGKI--VGTPDYMAPE---RLLGVPAS---ESTDIYALGVILYQML 225

Length = 932

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 46/200 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    + HRDLKP N+L V+ D    +++ DF +  G+  + + H    T      V +
Sbjct: 124 HS--ANVIHRDLKPSNLL-VNEDCE--LRIGDFGMARGLSSSPTEHKYFMTEY----VAT 174

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             + APE++     PE   Y    D+WS+G +   +L     F G              H
Sbjct: 175 RWYRAPELL--LSLPE---YTTAIDMWSVGCIFAEMLGRRQLFPGK----------NYVH 219

Query: 368 ACQEIL----------FHSIQ--------QGHYDFPEGEWSTI----SDEAKDLIRRLLV 405
             + IL           + I         Q         WS I    S EA DL+ ++L 
Sbjct: 220 QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQ 279

Query: 406 KDARKRLSAASVLKHPWIST 425
            D  +R++    L+HP+++ 
Sbjct: 280 FDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 16/102 (15%)

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
            + I HRDLKP+N+L  +   L  +KL DF L       +  +S     L   P      
Sbjct: 121 GQHILHRDLKPQNLLISY---LGELKLADFGLARAKSIPSQTYSSEVVTLWYRP------ 171

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             P+     +G  A+ Y    D+W  G +   +L G P F G
Sbjct: 172 --PD---VLLG--ATDYSSALDIWGAGCIFIEMLQGQPAFPG 206

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 62/184 (33%)

Query: 75  EYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN------------ 120
           +Y +K I+  K+    R    KEV    + + HPNI+Q  E +E++ N            
Sbjct: 27  QYVIKEINISKMSPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVMDYCEGGD 85

Query: 121 ------------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKL 150
                                         H   ++I HRD+K +NI      +   +KL
Sbjct: 86  LYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKL 142

Query: 151 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG 210
            DF  G     N++V       L  T +G+  +++PEI       E   Y+ + D+W+LG
Sbjct: 143 GDF--GIARVLNSTVE------LARTCIGTPYYLSPEIC------ENRPYNNKSDIWALG 188

Query: 211 VVVY 214
            V+Y
Sbjct: 189 CVLY 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 45/173 (26%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 124 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 167

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      + S YD + D+WSLG+    L  G PP                 H   
Sbjct: 168 MAPEVI------KQSAYDSKADIWSLGITAIELAKGEPPH-------------SELHP-M 207

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           ++LF  I + +    EG +S      K+ +   L K+   R +A  +LKH +I
Sbjct: 208 KVLF-LIPKNNPPTLEGNYSK---PLKEFVEACLNKEPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 124 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 167

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 168 MAPEVI------KQSAYDSKADIWSLGITAIELAKGEPP 200

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 18/105 (17%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           R+ HRDLKP+NIL     Q   +KL DF L     F  ++ S + T           + A
Sbjct: 130 RVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRA 177

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           PE++        S Y    DLWS+G +   +    P F G+   D
Sbjct: 178 PEVL------LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 216

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 51/197 (25%), Positives = 77/197 (39%), Gaps = 54/197 (27%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP------ 304
           +    HRD+KPENIL     Q   +KLCDF                    +LT       
Sbjct: 118 KHNCIHRDVKPENILITKQGQ---IKLCDFGFAR----------------ILTGPGDDYT 158

Query: 305 --VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-- 360
             V +  + APE++   +G     Y    D+W++G V   LL G P + G    D  +  
Sbjct: 159 DYVATRWYRAPELL---VGDTQ--YGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLI 213

Query: 361 QR--GETCHACQEIL-----FHSIQQGHYDFPEGE--------WSTISDEAKDLIRRLLV 405
           ++  G+     Q+I      F  +       PE E        +  IS  A   ++  L 
Sbjct: 214 RKTLGDLIPRHQQIFSTNQFFKGLS-----IPEPETREPLESKFPNISSPALSFLKGCLQ 268

Query: 406 KDARKRLSAASVLKHPW 422
            D  +RLS   +L+HP+
Sbjct: 269 MDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 67/246 (27%)

Query: 27  ARNKRRRKKTATSLVTSCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLP 85
           +R+KR     +  +  S F  L R +  + +G GA   V    + + E   A+K + + P
Sbjct: 2   SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-P 60

Query: 86  GHSRS---RVFKEVETFHHCQGHPNIIQLL---------EYYED--------DEN----- 120
             +++   R ++E+     C  H NII LL         E ++D        D N     
Sbjct: 61  FQNQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119

Query: 121 -----HERHKR----------------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 159
                HER                   I HRDLKP NI+ V  D    +K+ DF L    
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA--- 173

Query: 160 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 219
              T+  S + TP ++T      + APE++         GY +  D+WS+G ++  ++ G
Sbjct: 174 --RTAGTSFMMTPYVVTRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKG 221

Query: 220 YPPFYG 225
              F G
Sbjct: 222 GVLFPG 227

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 16/111 (14%)

Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
           N+   +++ HRDLKP+N+L     +L   KL DF L       T  +S     L   P  
Sbjct: 118 NYCHRRKVLHRDLKPQNLLINERGEL---KLADFGLARAKSIPTKTYSNEVVTLWYRP-- 172

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                 P+I+   +G  ++ Y  + D+W +G + Y +  G P F G+  E+
Sbjct: 173 ------PDIL---LG--STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 32/196 (16%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           C    E L +  +  I HRDLK  NIL         +KL DF  G   K   ++    + 
Sbjct: 109 CKQTLEALNYLHENKIIHRDLKAGNILFTLDGD---IKLADF--GVSAKNTRTIQRRDSF 163

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 +G+  +MAPE+V      +   YD + D+WSLG+ +  +    PP         
Sbjct: 164 ------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAQIEPP--------- 207

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
                   H     +   ++    + P   + S  S E KD +++ L K+   R +   +
Sbjct: 208 --------HHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQL 259

Query: 418 LKHPWISTAGTAHRPL 433
           L+HP+++    +++P+
Sbjct: 260 LQHPFVTV--NSNKPI 273

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 45.6 bits (109), Expect = 3e-05
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 25/113 (22%)

Query: 121 HERHK-RIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
           ++ HK  I H D+K EN+L     D+   + LCD+ L   I    S +            
Sbjct: 123 NDLHKHNIIHNDIKLENVLYDRAKDR---IYLCDYGL-CKIIGTPSCYD----------- 167

Query: 179 GSAEFMAPE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           G+ ++ +PE I           YD   D W++GV+ Y LL G  PF  +  E+
Sbjct: 168 GTLDYFSPEKIKGHN-------YDVSFDWWAVGVLTYELLTGKHPFKEDEDEE 213

Length = 267

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 24/103 (23%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDF----DLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           I HRD+KPEN+L  H D L   KLCDF    +L  G   N + +           V +  
Sbjct: 121 IVHRDIKPENLLISHNDVL---KLCDFGFARNLSEGSNANYTEY-----------VATRW 166

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           + +PE++   +G   + Y K  D+WS+G ++  L  G P F G
Sbjct: 167 YRSPELL---LG---APYGKAVDMWSVGCILGELSDGQPLFPG 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 46.1 bits (109), Expect = 3e-05
 Identities = 51/218 (23%), Positives = 87/218 (39%), Gaps = 68/218 (31%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNIIQLL 112
           +G GAY +V + ++  T  + A+K + + P  S     R ++E+    H + H N+I LL
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMK-HENVIGLL 80

Query: 113 EYYEDDENHER--------------------HKR------------------------IA 128
           + +  D + +R                    H++                        I 
Sbjct: 81  DVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGII 140

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRDLKP N L V+ D    +K+ DF L                  +   V +  + APE+
Sbjct: 141 HRDLKPGN-LAVNED--CELKILDFGLARQ-----------TDSEMTGYVVTRWYRAPEV 186

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +  +M      Y +  D+WS+G ++  +L G P F G+
Sbjct: 187 ILNWMH-----YTQTVDIWSVGCIMAEMLTGKPLFKGH 219

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 37/210 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   GI+   +  +   TP          
Sbjct: 114 ERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP---------N 161

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+    G +   Y    D W+LGV+++ ++ G  PF      D   Q  E     
Sbjct: 162 YIAPEILR---GED---YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTE----- 210

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWI 423
            + LF  I +     P     ++S +A  +++  L KD ++RL          +  HP+ 
Sbjct: 211 -DYLFQVILEKQIRIPR----SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265

Query: 424 STAG--TAHRPLVTPQVIRRNQSARELSSF 451
                    +  V P      +S R+L +F
Sbjct: 266 RNIDWDLLEQKQVLPPYKPNIESDRDLDNF 295

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 45.6 bits (109), Expect = 3e-05
 Identities = 51/221 (23%), Positives = 72/221 (32%), Gaps = 63/221 (28%)

Query: 52  KGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPGHSRSRVF-KEVETFHHCQGHP 106
            G+ LG+GA+  V           TE + AVK + +         F +E         HP
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS-HP 61

Query: 107 NIIQLL-------------EYYE----DD--ENHERH----------------------K 125
           NI++LL             EY       D    H                         K
Sbjct: 62  NIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESK 121

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
              HRDL   N L         VK+ DF L S   +    +          P+   ++MA
Sbjct: 122 NFVHRDLAARNCLVTENLV---VKISDFGL-SRDIYEDDYY--RKRGGGKLPI---KWMA 172

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
           PE +        S      D+WS GV+++ I   G  P+ G
Sbjct: 173 PESLKDGKFTSKS------DVWSFGVLLWEIFTLGEQPYPG 207

Length = 258

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 48/182 (26%), Positives = 70/182 (38%), Gaps = 25/182 (13%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+K  NIL      L   KL DF L      + +      T      V +  +  P
Sbjct: 140 ILHRDMKAANILITKDGIL---KLADFGLARAFSLSKNSKPNRYT----NRVVTLWYRPP 192

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           E++   +G     Y    D+W  G ++  +    P   GN  +         CG    E 
Sbjct: 193 ELL---LGER--DYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247

Query: 366 CHACQEI-LFHSIQ--QGHYD-FPEGEWSTISD-EAKDLIRRLLVKDARKRLSAASVLKH 420
                ++ LF  ++  QG      E     + D  A DLI +LLV D  KR+ A + L H
Sbjct: 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307

Query: 421 PW 422
            +
Sbjct: 308 DF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 17/100 (17%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRD+K ++IL     +   VKL DF   + I  +      L        VG+  +MAP
Sbjct: 138 VIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRKSL--------VGTPYWMAP 186

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E+++       + Y    D+WSLG++V  ++ G PP++ +
Sbjct: 187 EVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSD 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 4e-05
 Identities = 59/230 (25%), Positives = 86/230 (37%), Gaps = 80/230 (34%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKII------DKLPGHSRSR---VFKEVETFHHCQ 103
              +G+GAY +V    ++ T    A+K +      + +P  S  R   + K++E+F    
Sbjct: 4   LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIP-LSTLREIALLKQLESF---- 58

Query: 104 GHPNIIQLL------------------EYYEDD-----ENH-------ERHK-------- 125
            HPNI++LL                  E+ + D               E  K        
Sbjct: 59  EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLR 118

Query: 126 --------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
                   RI HRDLKP+NIL V  D    VK+ DF L     F  +          LT 
Sbjct: 119 GVDFLHSHRIVHRDLKPQNIL-VTSDG--QVKIADFGLARIYSFEMA----------LTS 165

Query: 178 -VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            V +  + APE++        S Y    D+WS+G +   L    P F G 
Sbjct: 166 VVVTLWYRAPEVL------LQSSYATPVDMWSVGCIFAELFRRRPLFRGT 209

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 4e-05
 Identities = 57/232 (24%), Positives = 85/232 (36%), Gaps = 68/232 (29%)

Query: 48  LYRLKGEILGKGAYASVQTCV--NILTELEYAVKIIDKLPGH----SRSRVFKEVETFHH 101
            Y ++G I G+G Y  V      N     EYA+K            S+S   +E+     
Sbjct: 1   KYEIEGCI-GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSAC-REIALLRE 58

Query: 102 CQGHPNIIQL---------------LEYYEDD-----ENHERHKR--------------- 126
            + H N++ L                +Y E D     + H + KR               
Sbjct: 59  LK-HENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQI 117

Query: 127 -----------IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
                      + HRDLKP NIL +    +   VK+ D  L          ++PL     
Sbjct: 118 LNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR------LFNAPLKPLAD 171

Query: 175 LTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           L P V +  + APE++   +G  A  Y K  D+W++G +   LL   P F G
Sbjct: 172 LDPVVVTIWYRAPELL---LG--ARHYTKAIDIWAIGCIFAELLTLEPIFKG 218

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 46.4 bits (110), Expect = 4e-05
 Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 30/176 (17%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP- 304
           L  +  QGI HRDLKP+NI+          K+ DF +G+       V       L  T  
Sbjct: 92  LACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGT---LLPGVRDADVATLTRTTE 148

Query: 305 -VGSAEFMAPE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 362
            +G+  + APE +    + P +       DL++ G++    L G     G          
Sbjct: 149 VLGTPTYCAPEQLRGEPVTPNS-------DLYAWGLIFLECLTGQRVVQG---------- 191

Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                +  EIL+  +       P             ++R+ L KD R+R ++A  L
Sbjct: 192 ----ASVAEILYQQLSPVDVSLPP---WIAGHPLGQVLRKALNKDPRQRAASAPAL 240

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 45.4 bits (108), Expect = 4e-05
 Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 35/184 (19%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFMA 312
           I HRDLK  N+L      L   K+ DF L          +   A P  +TP V +  + A
Sbjct: 129 IIHRDLKVSNLLLTDKGCL---KIADFGL-------ARTYGLPAKP--MTPKVVTLWYRA 176

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN---------CG-----EDC 358
           PE++   +G   + Y    D+W++G ++  LL   P   G                  + 
Sbjct: 177 PELL---LG--CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNES 231

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
            W          +    ++ +  Y+  + ++  +S+    L+  LL+ D +KR +A   L
Sbjct: 232 IWPGFSDLPLVGKF---TLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL 288

Query: 419 KHPW 422
           +  +
Sbjct: 289 ESSY 292

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 45.1 bits (107), Expect = 5e-05
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 22/108 (20%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 178
           H R  R+ HRDLKP+N+L    D    +KL DF L    GI      H           V
Sbjct: 118 HSR--RVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPVRVYTHE----------V 162

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            +  + APE++   +G  +  Y    D+WS+G +   +    P F+G+
Sbjct: 163 VTLWYRAPEVL---LG--SPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 45.1 bits (107), Expect = 5e-05
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+KPENIL     Q   VKLCDF       F  ++ +P    +    V +  + AP
Sbjct: 121 IIHRDIKPENILV---SQSGVVKLCDFG------FARTLAAP--GEVYTDYVATRWYRAP 169

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E++   +G   + Y +  D+W++G +V  +L G P F G+
Sbjct: 170 ELL---VGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 44.6 bits (105), Expect = 5e-05
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 45/194 (23%)

Query: 237 ETCHACQEIL-----FHSIQQGIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNT 290
           +  + C+E L      HS  +G  HRD+K  NIL   + D    VKL DF + + I    
Sbjct: 107 QIAYVCRETLQGLAYLHS--KGKMHRDIKGANILLTDNGD----VKLADFGVAAKITATI 160

Query: 291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           +             +G+  +MAPE+       +  GY++ CD+W++G+    L    PP 
Sbjct: 161 AKRKSF--------IGTPYWMAPEVAAV---EKNGGYNQLCDIWAVGITAIELAELQPPM 209

Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFP----EGEWSTISDEAKDLIRRLLVK 406
           +               H  + +   S  + ++  P    + +WS+      + ++  L K
Sbjct: 210 F-------------DLHPMRALFLMS--KSNFQPPKLKDKTKWSS---TFHNFVKISLTK 251

Query: 407 DARKRLSAASVLKH 420
           + +KR +A  +L H
Sbjct: 252 NPKKRPTAERLLTH 265

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 46/188 (24%), Positives = 71/188 (37%), Gaps = 36/188 (19%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           Q I HRDLKP+N+L  +   L  +KL DF L       +  +S     L   P       
Sbjct: 122 QHILHRDLKPQNLLISY---LGELKLADFGLARAKSIPSQTYSSEVVTLWYRP------- 171

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
            P+     +G  A+ Y    D+W  G +   +L G P F G       +++ E       
Sbjct: 172 -PD---VLLG--ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD---VFEQLEKIWTVLG 222

Query: 372 ILFHSIQQGHYDFP--EGEWSTISD---------------EAKDLIRRLLVKDARKRLSA 414
           +       G    P  + EW                    +A+DL  ++L+   + R+SA
Sbjct: 223 VPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISA 282

Query: 415 ASVLKHPW 422
              L HP+
Sbjct: 283 QDALLHPY 290

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 38/183 (20%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP+NIL     Q   +KL DF L     F  ++ S + T           + AP
Sbjct: 131 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 178

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++        S Y    DLWS+G +   +    P F G+   D   Q G+       I 
Sbjct: 179 EVL------LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDV---IG 226

Query: 374 FHSIQQGHYD--FPEGEWST------------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
               +    D   P   + +            I +  KDL+ + L  +  KR+SA S L 
Sbjct: 227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286

Query: 420 HPW 422
           HP+
Sbjct: 287 HPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 45.0 bits (106), Expect = 6e-05
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 18/103 (17%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           H+R I +RDLK +N++    D    +K+ DF +         +   + T    T  G+ +
Sbjct: 118 HRRGIIYRDLKLDNVML---DSEGHIKIADFGM-----CKEHMVDGVTTR---TFCGTPD 166

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           ++APEI+          Y K  D W+ GV++Y +L G PPF G
Sbjct: 167 YIAPEII------AYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 49/185 (26%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + I HRD+K +NI      +   +KL DF  G     N++V       L  T +
Sbjct: 114 LKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDF--GIARVLNSTVE------LARTCI 162

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +++PEI       E   Y+ + D+W+LG V+Y                      E 
Sbjct: 163 GTPYYLSPEIC------ENRPYNNKSDIWALGCVLY----------------------EM 194

Query: 366 C---HACQ----EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
           C   HA +    + L   I +G Y      +S    + ++L+ +L  ++ R R S  S+L
Sbjct: 195 CTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSY---DLRNLVSQLFKRNPRDRPSVNSIL 251

Query: 419 KHPWI 423
           +  +I
Sbjct: 252 EKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 45.0 bits (106), Expect = 6e-05
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 21/101 (20%)

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
           E+H+ I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+ 
Sbjct: 121 EKHQ-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTR 166

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YP 221
            +M+PE +      + + Y  + D+WS+G+ +  L  G YP
Sbjct: 167 SYMSPERL------QGTHYSVQSDIWSMGLSLVELAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 44.8 bits (106), Expect = 7e-05
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 19/99 (19%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRDLKP NIL    ++   +K+CDF L           + +  P +   V +  + AP
Sbjct: 129 VVHRDLKPSNILI---NENCDLKICDFGL-----------ARIQDPQMTGYVSTRYYRAP 174

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           EI+  +       YD   D+WS G +   +L G P F G
Sbjct: 175 EIMLTW-----QKYDVEVDIWSAGCIFAEMLEGKPLFPG 208

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 44.6 bits (105), Expect = 7e-05
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 20/101 (19%)

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
           E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+ 
Sbjct: 121 EKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTR 166

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
            +M+PE +      + + Y  + D+WS+G+ +  +  G  P
Sbjct: 167 SYMSPERL------QGTHYSVQSDIWSMGLSLVEMAIGRYP 201

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 18/105 (17%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I HRDLKPENIL     Q   VKL DF    G+    S    L TP+++T      + A
Sbjct: 128 CIVHRDLKPENILVTSGGQ---VKLADF----GLARIYSCQMAL-TPVVVT----LWYRA 175

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           PE++        S Y    D+WS+G +   +    P F GN   D
Sbjct: 176 PEVL------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 214

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.1 bits (105), Expect = 9e-05
 Identities = 63/244 (25%), Positives = 86/244 (35%), Gaps = 81/244 (33%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKL-------PGHSRS--RVFKEVETFHHC 102
           KG+ LG+G YA V    +  T    A+K I KL        G + +  R  K ++   H 
Sbjct: 4   KGKKLGEGTYAVVYKARDKETGRIVAIKKI-KLGERKEAKDGINFTALREIKLLQELKH- 61

Query: 103 QGHPNIIQLLEYYEDDEN---------------------------------------HER 123
              PNII LL+ +    N                                          
Sbjct: 62  ---PNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL 118

Query: 124 HKR-IAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTP-V 178
           H   I HRDLKP N+L      ++    +KL DF L        S  SP      +T  V
Sbjct: 119 HSNWILHRDLKPNNLL------IASDGVLKLADFGLA------RSFGSP---NRKMTHQV 163

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
            +  + APE+     G  A  Y    D+WS+G +   LL   P   G+   D   Q G+ 
Sbjct: 164 VTRWYRAPEL---LFG--ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID---QLGKI 215

Query: 239 CHAC 242
             A 
Sbjct: 216 FEAL 219

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 17/101 (16%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I +RDLK +N++    D    +K+ DF +        ++   + T    T  G+ +++
Sbjct: 120 KGIIYRDLKLDNVML---DSEGHIKIADFGM-----CKENMWDGVTTK---TFCGTPDYI 168

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           APEI+          Y K  D W+ GV++Y +L G  PF G
Sbjct: 169 APEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 44.3 bits (104), Expect = 9e-05
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRD+K ++IL     +   +KL DF    G     S   P    L    VG+  +MAP
Sbjct: 139 VIHRDIKSDSILLTSDGR---IKLSDF----GFCAQVSKEVPKRKSL----VGTPYWMAP 187

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           E+++         Y    D+WSLG++V  ++ G PP++
Sbjct: 188 EVISRL------PYGTEVDIWSLGIMVIEMIDGEPPYF 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 44.4 bits (105), Expect = 9e-05
 Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 33/194 (17%)

Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRD+K ENI    P+      L DF  G+  K +    +P          G+ E  
Sbjct: 204 RGIIHRDVKTENIFLDEPEN---AVLGDF--GAACKLDAHPDTPQCYGW----SGTLETN 254

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---------- 361
           +PE++   + P    Y  + D+WS G+V++ +       +G   +    Q          
Sbjct: 255 SPELLA--LDP----YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQV 308

Query: 362 ------RGETCHACQEILFHSIQQGH-YDFPEG-EWSTISDEAKDLIRRLLVKDARKRLS 413
                 +  + + C+    ++I     Y  P       +  + + LI ++L  D   R S
Sbjct: 309 HPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS 368

Query: 414 AASVLKHPWISTAG 427
           A  +L  P  +   
Sbjct: 369 AQDILSLPLFTKEP 382

Length = 392

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K  NI      +   +KL DF +       +         +  T VG+  +M+P
Sbjct: 122 ILHRDIKTLNIFL---TKAGLIKLGDFGISK--ILGSE------YSMAETVVGTPYYMSP 170

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
           E+       +   Y+ + D+W+LG V+Y LL 
Sbjct: 171 ELC------QGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 44.3 bits (104), Expect = 1e-04
 Identities = 50/213 (23%), Positives = 85/213 (39%), Gaps = 62/213 (29%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---------SRSRVFKEVET------F 99
           ++G+G+YA V        +  YA+K++ K   H         +   VF++  +       
Sbjct: 2   VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL 61

Query: 100 HHC-QGHPNIIQLLEYYEDD-------------ENHER-------------HKR-IAHRD 131
           H C Q    +  ++EY                 E H R             H+R I +RD
Sbjct: 62  HSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRD 121

Query: 132 LKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           LK +N+L    D    +KL D+ +   G+    +  +   TP          ++APEI+ 
Sbjct: 122 LKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFCGTP---------NYIAPEILR 169

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                E  G+    D W+LGV+++ ++ G  PF
Sbjct: 170 G----EEYGFS--VDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 31/185 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              + HRDLKP+N+L     +L   KL DF L     F   V    A  + L       +
Sbjct: 117 SHNVLHRDLKPQNLLINKNGEL---KLADFGLARA--FGIPVRCYSAEVVTLW------Y 165

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGED--------CGWQ 361
             P+++    G  A  Y    D+WS G +   L   G P F GN  +D         G  
Sbjct: 166 RPPDVL---FG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220

Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASV 417
             E+     ++  +      Y         +    +   +DL++ LLV +  +R+SA   
Sbjct: 221 TEESWPGVSKLPDYKPYP-MYP-ATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA 278

Query: 418 LKHPW 422
           L+HP+
Sbjct: 279 LQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 43/195 (22%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L     + + +KL DF L    GI   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI--DRRTNALKLADFGLARAFGIPVRTFTHE----------VVTLWYR 170

Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRG 363
           APEI+   +G  +  Y    D+WS+G +   ++   P F G+   D         G    
Sbjct: 171 APEIL---LG--SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNE 225

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWS---------TISDEAKDLIRRLLVKDARKRLSA 414
           ET          S+      FP  +W          T+     DL+ ++L  D  KR++A
Sbjct: 226 ETWPGVT-----SLPDYKSAFP--KWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA 278

Query: 415 ASVLKHPWISTAGTA 429
            + L+H +    G A
Sbjct: 279 RAALEHEYFKDLGDA 293

Length = 294

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 44.5 bits (105), Expect = 1e-04
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 22/117 (18%)

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
           +G+ +++APE++          +    D W+LGV ++  L G PPF             E
Sbjct: 541 LGTPDYLAPELL------LGKPHGPAVDWWALGVCLFEFLTGIPPF-----------NDE 583

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
           T     + +F +I      +PEGE   +S  A++ I  LL  D  KR     + +HP
Sbjct: 584 T----PQQVFQNILNRDIPWPEGE-EKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 34/188 (18%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ + HRDLKP+N+L     +L   KL DF L       +  +S     L   P      
Sbjct: 121 QRRVLHRDLKPQNLLISERGEL---KLADFGLARAKSVPSKTYSNEVVTLWYRP------ 171

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG-ED--------CGWQ 361
             P+++   +G  ++ Y    D+W +G + Y +  G P F G+   ED         G  
Sbjct: 172 --PDVL---LG--STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTP 224

Query: 362 RGETCHACQEILFHSIQQGHYDFPEGE-----WSTISD--EAKDLIRRLLVKDARKRLSA 414
             ET            +   + F            +      ++L  + L  + +KR+SA
Sbjct: 225 TEETWPGVSS--NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISA 282

Query: 415 ASVLKHPW 422
           A  +KHP+
Sbjct: 283 AEAMKHPY 290

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 62/213 (29%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHHCQGHPNIIQL 111
           ++G+G+YA V       T   YA+K+I K   +       V  E   F     HP ++ L
Sbjct: 2   VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGL 61

Query: 112 -------------LEYYEDD-------------ENHER-------------HKR-IAHRD 131
                        +E+                 E H R             H+R I +RD
Sbjct: 62  HSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRD 121

Query: 132 LKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           LK +N+L    D    +KL D+ +   GI+   +  +   TP          ++APEI+ 
Sbjct: 122 LKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP---------NYIAPEILR 169

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
              G +   Y    D W+LGV+++ ++ G  PF
Sbjct: 170 ---GED---YGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 20/96 (20%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 125 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 171

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YP 348
           E +      + + Y  + D+WS+G+ +  L  G YP
Sbjct: 172 ERL------QGTHYSVQSDIWSMGLSLVELAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 31/163 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   G+    +  +   TP          
Sbjct: 114 ERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFCGTP---------N 161

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+      E  G+    D W+LGV+++ ++ G  PF      D      +     
Sbjct: 162 YIAPEILRG----EEYGFS--VDWWALGVLMFEMMAGRSPF------DIITDNPDM--NT 207

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
           ++ LF  I +     P      +S +A  +++  L KD ++RL
Sbjct: 208 EDYLFQVILEKPIRIPR----FLSVKASHVLKGFLNKDPKERL 246

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 24/107 (22%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDF----------DLGSGIKFNT--SVHSPLA 170
           H + + HRDLKP+NIL         V + D+          +    I  +     +S + 
Sbjct: 130 HSKGVLHRDLKPDNILL---GLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMT 186

Query: 171 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
            P  +  VG+ ++MAPE     +G  AS   +  D+++LGV++Y +L
Sbjct: 187 IPGKI--VGTPDYMAPE---RLLGVPAS---ESTDIYALGVILYQML 225

Length = 932

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 36/189 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++   HRD+K  NIL  +  Q+   KL DF L    +   S  S   T  ++T      +
Sbjct: 134 KKNFLHRDIKCSNILLNNKGQI---KLADFGLA---RLYNSEESRPYTNKVIT----LWY 183

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN------------CGEDC 358
             PE++   +G E   Y    D+WS G ++  L    P F  N            CG  C
Sbjct: 184 RPPELL---LGEER--YGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC 238

Query: 359 --GWQRGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
              W         +   F++++    +      E+S I   A DL+  +L  D  KR +A
Sbjct: 239 PAVWP-----DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTA 293

Query: 415 ASVLKHPWI 423
              L  PW+
Sbjct: 294 EEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 55/219 (25%), Positives = 88/219 (40%), Gaps = 58/219 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHH 101
             +L R+    +G GA  +V   ++  T   YA+K+I     H    R ++ +E+E    
Sbjct: 73  LSELERVN--RIGSGAGGTVYKVIHRPTGRLYALKVI--YGNHEDTVRRQICREIEILRD 128

Query: 102 CQGHPNIIQ-------------LLEYYEDDE------NHER----------------HKR 126
              HPN+++             LLE+ +           E+                H+R
Sbjct: 129 VN-HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRR 187

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I HRD+KP N+L    +    VK+ DF +    +       P       + VG+  +M+
Sbjct: 188 HIVHRDIKPSNLLI---NSAKNVKIADFGVS---RILAQTMDPCN-----SSVGTIAYMS 236

Query: 186 PEIVNAFMGPEASGYDKRC-DLWSLGVVVYILLCGYPPF 223
           PE +N  +   A  YD    D+WSLGV +     G  PF
Sbjct: 237 PERINTDLNHGA--YDGYAGDIWSLGVSILEFYLGRFPF 273

Length = 353

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 18/103 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H     I +RD+KPEN+L    D     +L D  L   +K   ++             G+
Sbjct: 110 HLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQ---------RAGT 157

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPEI+      +   Y    D +++G  +Y ++ G  PF
Sbjct: 158 NGYMAPEIL------KEEPYSYPVDWFAMGCSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 42.9 bits (101), Expect = 4e-04
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 120 NHERHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
           +H   K + HRD+K  NIL C +      VKL DF  G    +  +V   +      TP 
Sbjct: 157 HHVHSKHMIHRDIKSANILLCSN----GLVKLGDF--GFSKMYAATVSDDVGRTFCGTPY 210

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
               ++APEI           Y K+ D++SLGV++Y LL    PF G
Sbjct: 211 ----YVAPEIW------RRKPYSKKADMFSLGVLLYELLTLKRPFDG 247

Length = 496

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 23/96 (23%)

Query: 126 RIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
            I HRD+KP N+L    CV       +K+CDF L    + + S H       +   V + 
Sbjct: 123 GILHRDIKPGNLLVNSNCV-------LKICDFGLARVEEPDESKH-------MTQEVVTQ 168

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
            + APEI+   MG  +  Y    D+WS+G +   LL
Sbjct: 169 YYRAPEIL---MG--SRHYTSAVDIWSVGCIFAELL 199

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 25/107 (23%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDF----DLGSGIKFNTSVHSPLATPLLLTPVG 306
            +   HRDL   N L V  + +  VK+ DF    DL     +       L       P+ 
Sbjct: 120 SKNFIHRDLAARNCL-VGENLV--VKISDFGLSRDLYDD-DYYRKRGGKL-------PI- 167

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
              +MAPE +          +  + D+WS GV+++ I   G  P+ G
Sbjct: 168 --RWMAPESLKEGK------FTSKSDVWSFGVLLWEIFTLGEQPYPG 206

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 19/103 (18%)

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH-SPLATPLLLTPVGSAEF 183
           KR  HRD+   N+L   PD    VKL DF L   ++  +    S    P+        ++
Sbjct: 126 KRFVHRDIAARNVLVSSPDC---VKLGDFGLSRYLEDESYYKASKGKLPI--------KW 174

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
           MAPE +N      AS      D+W  GV ++ IL+ G  PF G
Sbjct: 175 MAPESINFRRFTSAS------DVWMFGVCMWEILMLGVKPFQG 211

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 41.4 bits (98), Expect = 6e-04
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 17/103 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            +   HRDL   N L V  + +  VK+ DF L S   ++   +      L   P+    +
Sbjct: 121 SKNFIHRDLAARNCL-VGENLV--VKISDFGL-SRDLYDDDYYKVKGGKL---PI---RW 170

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
           MAPE +          +  + D+WS GV+++ I   G  P+ G
Sbjct: 171 MAPESLKEGK------FTSKSDVWSFGVLLWEIFTLGEEPYPG 207

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 41.7 bits (98), Expect = 6e-04
 Identities = 61/224 (27%), Positives = 86/224 (38%), Gaps = 68/224 (30%)

Query: 53  GEILGKGAYASV--QTCVNILTE---LEYAVKIIDKLPGHSRSR--VFKEVETFHHCQGH 105
           G+ LG GA+  V   T   +      ++ AVK++ K   HS  R  +  E++   H   H
Sbjct: 40  GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKML-KPTAHSSEREALMSELKIMSHLGNH 98

Query: 106 PNIIQLL-------------EY--YEDDENHERHKRIA---------------------- 128
            NI+ LL             EY  Y D  N  R KR +                      
Sbjct: 99  ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA 158

Query: 129 -----HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
                HRDL   N+L  H      VK+CDF L   I  +++        L   PV   ++
Sbjct: 159 SKNCIHRDLAARNVLLTHG---KIVKICDFGLARDIMNDSNYVVKGNARL---PV---KW 209

Query: 184 MAPE-IVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
           MAPE I N         Y    D+WS G++++ I   G  P+ G
Sbjct: 210 MAPESIFNCV-------YTFESDVWSYGILLWEIFSLGSNPYPG 246

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 41.2 bits (97), Expect = 8e-04
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 20/107 (18%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VG 179
           HE    I HRDLK  N+L      L   K+ DF L          +   A P  +TP V 
Sbjct: 125 HENF--IIHRDLKVSNLLLTDKGCL---KIADFGL-------ARTYGLPAKP--MTPKVV 170

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +  + APE++   +G   + Y    D+W++G ++  LL   P   G 
Sbjct: 171 TLWYRAPELL---LG--CTTYTTAIDMWAVGCILAELLAHKPLLPGK 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 41.6 bits (97), Expect = 8e-04
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 19/96 (19%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 125 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 171

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
           E +      + + Y  + D+WS+G+ +  +  G  P
Sbjct: 172 ERL------QGTHYSVQSDIWSMGLSLVEMAIGRYP 201

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 20/89 (22%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
           R+ HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  +
Sbjct: 120 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWY 166

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVV 212
            APEI+   +G +   Y    D+WSLG +
Sbjct: 167 RAPEIL---LGCKY--YSTAVDIWSLGCI 190

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 20/104 (19%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
           R+ HRDLKP+N+L    D+   +KL DF L    G+   T  H           V +  +
Sbjct: 119 RVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVRTYTHE----------VVTLWY 165

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
            APEI+   +G  +  Y    D+WS+G +   ++   P F G+ 
Sbjct: 166 RAPEIL---LG--SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS 204

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 62/213 (29%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHHCQGHPNIIQL 111
           ++G+G+YA V       TE  YA+K++ K   +       V  E   F     HP ++ L
Sbjct: 2   VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 61

Query: 112 LEYYEDD--------------------------ENHER-------------HKR-IAHRD 131
              ++ +                          E H R             H+R I +RD
Sbjct: 62  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 121

Query: 132 LKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           LK +N+L    D    +KL D+ +   G++   +  +   TP          ++APEI+ 
Sbjct: 122 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP---------NYIAPEIL- 168

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                    Y    D W+LGV+++ ++ G  PF
Sbjct: 169 -----RGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 54/160 (33%)

Query: 70  ILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH 129
           +L ELE   + + +     +  +++ ++  + C  H N I                   H
Sbjct: 86  VLNELEKNPRGVPE--HLIKKIIWQTLQAVNFCHKH-NCI-------------------H 123

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP--------VGSA 181
           RD+KPENIL     Q   +KLCDF                    +LT         V + 
Sbjct: 124 RDVKPENILITKQGQ---IKLCDFGFAR----------------ILTGPGDDYTDYVATR 164

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
            + APE++   +G     Y    D+W++G V   LL G P
Sbjct: 165 WYRAPELL---VGDTQ--YGPPVDVWAIGCVFAELLTGQP 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 43/177 (24%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++ I HRDLK +N+      + + +K+ D     GI         +A+ L+ TP     +
Sbjct: 120 EKHILHRDLKTQNVFLT---RTNIIKVGDL----GIARVLENQCDMASTLIGTPY----Y 168

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           M+PE+ +         Y+ + D+W+LG  VY                   +     HA  
Sbjct: 169 MSPELFSN------KPYNYKSDVWALGCCVY-------------------EMATLKHAFN 203

Query: 371 EILFHSIQQGHYDFPEGEW----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
               +S+    Y   EG+        S E  +LI  +L K   KR S  S+L+ P+I
Sbjct: 204 AKDMNSLV---YRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 66/216 (30%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQL- 111
           +G GA   V    + +  +  AVK + + P  +++   R ++E+     C  H NII L 
Sbjct: 29  IGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYREL-VLLKCVNHKNIISLL 86

Query: 112 --------LEYYED------------------DENHERHKR----------------IAH 129
                   LE ++D                  + +HER                   I H
Sbjct: 87  NVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIH 146

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
           RDLKP NI+ V  D    +K+ DF L       T+  + + TP ++T      + APE++
Sbjct: 147 RDLKPSNIV-VKSD--CTLKILDFGLA-----RTACTNFMMTPYVVTRY----YRAPEVI 194

Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
                    GY +  D+WS+G ++  L+ G   F G
Sbjct: 195 LGM------GYKENVDIWSVGCIMGELVKGSVIFQG 224

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 30/112 (26%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           HK  + HRDLKP+N+L     Q   +K+ D  LG       S+           PV S  
Sbjct: 127 HKHGVMHRDLKPQNLLV--DKQKGLLKIADLGLGR----AFSI-----------PVKSYT 169

Query: 183 -------FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  + APE++   +G  ++ Y    D+WS+G +   +    P F G+ 
Sbjct: 170 HEIVTLWYRAPEVL---LG--STHYSTPVDIWSVGCIFAEMSRKQPLFPGDS 216

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 54/217 (24%), Positives = 81/217 (37%), Gaps = 68/217 (31%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
           +G GAY SV    +  T L  AVK + + P  S     R ++E+    H + H N+I LL
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 82

Query: 113 EYYE--------------------------------DDE------------NHERHKRIA 128
           + +                                 DD              +     I 
Sbjct: 83  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 142

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRDLKP N L V+ D    +K+ DF L        + +           V +  + APEI
Sbjct: 143 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 188

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +  +M      Y++  D+WS+G ++  LL G   F G
Sbjct: 189 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPG 220

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 19/103 (18%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
           R+ HRDLKP+N+L     + + +KL DF L    GI   T  H           V +  +
Sbjct: 122 RVLHRDLKPQNLLI--DRRTNALKLADFGLARAFGIPVRTFTHE----------VVTLWY 169

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            APEI+   +G  +  Y    D+WS+G +   ++   P F G+
Sbjct: 170 RAPEIL---LG--SRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207

Length = 294

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 16/102 (15%)

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
            +R+ HRDLKP+N+L     +L   KL DF L       +  +S     L   P      
Sbjct: 121 QRRVLHRDLKPQNLLISERGEL---KLADFGLARAKSVPSKTYSNEVVTLWYRP------ 171

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             P+++   +G  ++ Y    D+W +G + Y +  G P F G
Sbjct: 172 --PDVL---LG--STEYSTSLDMWGVGCIFYEMATGRPLFPG 206

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 19/94 (20%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           HE+H  I HRDLK +N+      + + +K+ D     GI         +A+ L+ TP   
Sbjct: 119 HEKH--ILHRDLKTQNVFLT---RTNIIKVGDL----GIARVLENQCDMASTLIGTPY-- 167

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 214
             +M+PE+ +         Y+ + D+W+LG  VY
Sbjct: 168 --YMSPELFS------NKPYNYKSDVWALGCCVY 193

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 39.6 bits (93), Expect = 0.003
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 60/203 (29%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQ 110
           E +G GAY  V + ++  +  + A+K I     +P  ++ R  +E++   H + H NII 
Sbjct: 11  ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAK-RTLRELKILRHFK-HDNIIA 68

Query: 111 LLEYY-----------------EDDENH---------ERHKR-----------------I 127
           + +                   E D +H         E H R                 +
Sbjct: 69  IRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDLKP N+L V+ D    +++ DF +  G+  + + H    T      V +  + APE
Sbjct: 129 IHRDLKPSNLL-VNEDCE--LRIGDFGMARGLSSSPTEHKYFMTEY----VATRWYRAPE 181

Query: 188 IVNAFMGPEASGYDKRCDLWSLG 210
           ++     PE   Y    D+WS+G
Sbjct: 182 LL--LSLPE---YTTAIDMWSVG 199

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 40.2 bits (94), Expect = 0.003
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 14/106 (13%)

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP--VGS 180
           H + I HRDLKP+NI+          K+ DF +G+       V       L  T   +G+
Sbjct: 96  HNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGT---LLPGVRDADVATLTRTTEVLGT 152

Query: 181 AEFMAPE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             + APE +    + P +       DL++ G++    L G     G
Sbjct: 153 PTYCAPEQLRGEPVTPNS-------DLYAWGLIFLECLTGQRVVQG 191

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 19/99 (19%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH-SPLATPLLLTPVGSAEFMAPE 314
           HRD+   N+L   PD    VKL DF L   ++  +    S    P+        ++MAPE
Sbjct: 130 HRDIAARNVLVSSPDC---VKLGDFGLSRYLEDESYYKASKGKLPI--------KWMAPE 178

Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
            +N      AS      D+W  GV ++ IL+ G  PF G
Sbjct: 179 SINFRRFTSAS------DVWMFGVCMWEILMLGVKPFQG 211

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 39.5 bits (92), Expect = 0.004
 Identities = 53/216 (24%), Positives = 83/216 (38%), Gaps = 67/216 (31%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNIIQLL 112
           +G GAY SV + ++  T  + A+K + + P  S     R ++E+    H Q H N+I LL
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSR-PFQSEIFAKRAYRELTLLKHMQ-HENVIGLL 80

Query: 113 E-------------------YYEDDENHER-----------------------HKR-IAH 129
           +                   Y + D                            H   I H
Sbjct: 81  DVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIH 140

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
           RDLKP N L V+ D    +K+ DF L              A   +   V +  + APE++
Sbjct: 141 RDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRAPEVI 186

Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             +M      Y++  D+WS+G ++  +L G   F G
Sbjct: 187 LNWM-----HYNQTVDIWSVGCIMAEMLTGKTLFKG 217

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 39.3 bits (92), Expect = 0.004
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 18/100 (18%)

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + AP
Sbjct: 139 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 186

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E++   +G    GY +  D+WS+G ++  ++ G   F G 
Sbjct: 187 EVI---LG---MGYKENVDIWSVGCIMGEMIRGTVLFPGT 220

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 54/227 (23%), Positives = 77/227 (33%), Gaps = 85/227 (37%)

Query: 56  LGKGAYASVQTCVNILTELEYAVK--------IIDKLPGHSRSRVFKEVETFHHCQGHPN 107
           +G+GAY  V +  N  T  + A+K         ID        R  +E++   H   H N
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAK------RTLREIKLLRHLD-HEN 65

Query: 108 IIQLLE-------------Y--YE--DDENH----------ERHKR-------------- 126
           +I + +             Y  YE  D + H          + H +              
Sbjct: 66  VIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH 125

Query: 127 ---IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
              + HRDLKP N+L      L   K+CDF L                    T     +F
Sbjct: 126 SANVLHRDLKPSNLLLNANCDL---KICDFGLAR------------------TTSEKGDF 164

Query: 184 MAPEIVNA-FMGPE----ASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           M   +V   +  PE     S Y    D+WS+G +   LL   P F G
Sbjct: 165 MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG 211

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 39.3 bits (91), Expect = 0.004
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 14/121 (11%)

Query: 107 NIIQLLEYYEDDENHERHKR-IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTS 164
           ++++ L Y   D  H  H   + HRDLKP NIL +    +   VK+   D+G    FN  
Sbjct: 108 SMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA--DMGFARLFN-- 163

Query: 165 VHSPLATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             SPL     L P V +  + APE++   +G  A  Y K  D+W++G +   LL   P F
Sbjct: 164 --SPLKPLADLDPVVVTFWYRAPELL---LG--ARHYTKAIDIWAIGCIFAELLTSEPIF 216

Query: 224 Y 224
           +
Sbjct: 217 H 217

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 14/120 (11%)

Query: 108 IIQLLEYYEDDENHERHKR-IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSV 165
           +++ L Y   D  H  H   + HRDLKP NIL +    +   VK+   D+G    FN   
Sbjct: 109 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA--DMGFARLFN--- 163

Query: 166 HSPLATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
            SPL     L P V +  + APE++   +G  A  Y K  D+W++G +   LL   P F+
Sbjct: 164 -SPLKPLADLDPVVVTFWYRAPELL---LG--ARHYTKAIDIWAIGCIFAELLTSEPIFH 217

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	539
KOG0607|consensus	463		100.0
KOG0615|consensus	475		100.0
KOG0033|consensus	355		100.0
KOG0604|consensus	400		100.0
KOG0575|consensus	592		100.0
KOG0599|consensus	411		100.0
KOG0598|consensus	357		100.0
KOG0605|consensus	550		100.0
KOG0616|consensus	355		100.0
KOG0592|consensus	604		100.0
KOG0032|consensus	382		100.0
KOG0588|consensus	786		100.0
KOG0593|consensus	396		100.0
KOG0603|consensus	612		100.0
KOG0583|consensus	370		100.0
KOG0694|consensus	694		100.0
KOG0659|consensus	318		100.0
KOG4717|consensus	864		100.0
KOG0595|consensus	429		100.0
KOG0585|consensus	576		100.0
KOG0600|consensus	560		100.0
KOG0661|consensus	538		100.0
KOG0660|consensus	359		100.0
KOG0597|consensus	808		100.0
KOG0581|consensus	364		100.0
KOG0663|consensus	419		100.0
KOG4236|consensus	888		100.0
KOG0594|consensus	323		100.0
KOG0580|consensus	281		100.0
KOG0610|consensus	459		100.0
KOG0690|consensus	516		100.0
KOG0611|consensus	668		100.0
KOG0578|consensus	550		100.0
KOG0658|consensus	364		100.0
KOG0667|consensus	586		100.0
KOG0612|consensus	1317		100.0
KOG0201|consensus	467		100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0582|consensus	516		100.0
KOG0591|consensus	375		100.0
KOG0662|consensus	292		100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0198|consensus	313		100.0
KOG0614|consensus	732		100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0579|consensus	1187		100.0
KOG0986|consensus	591		100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
KOG0586|consensus	596		100.0
KOG0696|consensus	683		100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
PTZ00284	467	protein kinase; Provisional	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0577|consensus	948		100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG4279|consensus	1226		100.0
KOG0608|consensus	1034		100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG1989|consensus	738		100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0983|consensus	391		100.0
KOG0596|consensus	677		100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
KOG0666|consensus	438		100.0
KOG0589|consensus	426		100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
KOG1035|consensus	1351		100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG0695|consensus	593		100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG0669|consensus	376		100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
KOG0574|consensus	502		100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
KOG0671|consensus	415		100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
KOG4645|consensus	1509		100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0192|consensus	362		100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
KOG0668|consensus	338		100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG1006|consensus	361		100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0584|consensus	632		100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
KOG4250|consensus	732		100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0587|consensus	953		100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.98
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.98
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.98
KOG4721|consensus	904		99.98
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.98
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.98
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.98
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.98
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.98
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.98
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.98
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.98
KOG0665|consensus	369		99.98
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.98
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.98
KOG1151|consensus	775		99.98
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.98
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.98
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.98
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.98
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.98
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.98
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
KOG2345|consensus	302		99.97
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.97
KOG0664|consensus	449		99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
KOG0670|consensus	752		99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.97
KOG1027|consensus	903		99.96
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.96
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.96
KOG0193|consensus	678		99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
KOG1167|consensus	418		99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.96
KOG0197|consensus	468		99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.96
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.95
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.95
KOG0984|consensus	282		99.95
KOG1187|consensus	361		99.95
KOG0590|consensus	601		99.94
KOG1152|consensus	772		99.94
KOG1026|consensus	774		99.94
KOG0576|consensus	829		99.94
KOG1290|consensus	590		99.93
KOG0194|consensus	474		99.93
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.93
KOG1095|consensus	1025		99.93
KOG1345|consensus	378		99.93
KOG0606|consensus	1205		99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
KOG0607|consensus	463		99.92
KOG0199|consensus	1039		99.9
KOG4257|consensus	974		99.9
KOG0603|consensus	612		99.9
KOG1094|consensus	807		99.89
KOG3653|consensus	534		99.89
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
KOG4278|consensus	1157		99.88
KOG2052|consensus	513		99.87
KOG0196|consensus	996		99.87
KOG0200|consensus	609		99.86
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG1025|consensus	1177		99.85
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.84
KOG0598|consensus	357		99.83
PRK09188	365	serine/threonine protein kinase; Provisional	99.81
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.81
KOG0616|consensus	355		99.79
KOG0595|consensus	429		99.79
KOG0592|consensus	604		99.79
KOG0605|consensus	550		99.78
KOG0694|consensus	694		99.77
KOG0615|consensus	475		99.76
KOG0593|consensus	396		99.76
KOG0575|consensus	592		99.74
KOG1033|consensus	516		99.74
KOG0612|consensus	1317		99.73
KOG0588|consensus	786		99.72
KOG1164|consensus	322		99.71
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.7
KOG0604|consensus	400		99.7
KOG0591|consensus	375		99.7
KOG1165|consensus	449		99.7
KOG0599|consensus	411		99.69
KOG0033|consensus	355		99.69
KOG1024|consensus	563		99.69
KOG0614|consensus	732		99.68
KOG0690|consensus	516		99.68
KOG4158|consensus	598		99.67
KOG0696|consensus	683		99.67
KOG0597|consensus	808		99.67
KOG1163|consensus	341		99.65
KOG0658|consensus	364		99.65
KOG0581|consensus	364		99.65
KOG0667|consensus	586		99.65
KOG0608|consensus	1034		99.64
KOG0659|consensus	318		99.64
KOG0600|consensus	560		99.64
KOG0660|consensus	359		99.64
KOG0594|consensus	323		99.64
KOG0583|consensus	370		99.63
KOG0663|consensus	419		99.63
KOG0986|consensus	591		99.62
KOG0578|consensus	550		99.62
KOG0661|consensus	538		99.61
KOG0596|consensus	677		99.61
KOG0601|consensus	524		99.61
KOG1240|consensus	1431		99.61
PRK10345	210	hypothetical protein; Provisional	99.61
KOG0192|consensus	362		99.6
KOG0983|consensus	391		99.6
KOG4721|consensus	904		99.6
KOG0610|consensus	459		99.59
KOG0585|consensus	576		99.58
KOG0611|consensus	668		99.58
PRK12274	218	serine/threonine protein kinase; Provisional	99.57
KOG0032|consensus	382		99.55
KOG1151|consensus	775		99.54
KOG0198|consensus	313		99.54
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.54
KOG4236|consensus	888		99.54
KOG4250|consensus	732		99.53
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.52
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.52
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.52
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.52
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.52
PHA02882	294	putative serine/threonine kinase; Provisional	99.51
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.51
KOG4717|consensus	864		99.51
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.51
PTZ00036	440	glycogen synthase kinase; Provisional	99.51
KOG0984|consensus	282		99.5
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.5
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.5
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.5
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.5
PTZ00284	467	protein kinase; Provisional	99.5
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.5
KOG1006|consensus	361		99.5
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.5
KOG0193|consensus	678		99.49
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.49
KOG0590|consensus	601		99.49
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.49
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.49
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.49
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.49
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.48
KOG0695|consensus	593		99.48
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.48
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.48
KOG0201|consensus	467		99.48
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.48
PHA03212	391	serine/threonine kinase US3; Provisional	99.48
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.48

>KOG0607|consensus

Probab=100.00  E-value=8e-75  Score=551.48  Aligned_cols=382  Identities=56%  Similarity=0.958  Sum_probs=320.5

Q ss_pred             HHHhhhcccccccccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCC
Q psy16343         28 RNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPN  107 (539)
Q Consensus        28 ~~~~~~~~~~~~~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~Hpn  107 (539)
                      +.+++++-..++...+.|.|.|++++++||+|+||.|..|+...||.+||||+|+|...+.+.++++|++++.+|++|+|
T Consensus        58 rrk~rk~gr~~ss~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~n  137 (463)
T KOG0607|consen   58 RRKKRKRGRATSSLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKN  137 (463)
T ss_pred             ccccccCCcccccccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCcc
Confidence            33344444566778889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccc
Q psy16343        108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE  187 (539)
Q Consensus       108 Iv~l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE  187 (539)
                      |++|+++|+++..+|   .|      .|.+-                 | +              .++..|..       
T Consensus       138 ilqLiefFEdd~~FY---LV------fEKm~-----------------G-G--------------plLshI~~-------  169 (463)
T KOG0607|consen  138 ILQLIEFFEDDTRFY---LV------FEKMR-----------------G-G--------------PLLSHIQK-------  169 (463)
T ss_pred             HHHHHHHhcccceEE---EE------Eeccc-----------------C-c--------------hHHHHHHH-------
Confidence            999999999999887   33      33222                 1 1              11111111       


Q ss_pred             ccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeec
Q psy16343        188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCV  267 (539)
Q Consensus       188 ~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~  267 (539)
                       ...|.+.+++.                                 +++.   +..++.|+|  .+||.||||||||||+.
T Consensus       170 -~~~F~E~EAs~---------------------------------vvkd---ia~aLdFlH--~kgIAHRDlKPENiLC~  210 (463)
T KOG0607|consen  170 -RKHFNEREASR---------------------------------VVKD---IASALDFLH--TKGIAHRDLKPENILCE  210 (463)
T ss_pred             -hhhccHHHHHH---------------------------------HHHH---HHHHHHHHh--hcCcccccCCccceeec
Confidence             11223333322                                 4455   788889999  99999999999999999


Q ss_pred             CCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC
Q psy16343        268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY  347 (539)
Q Consensus       268 ~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~  347 (539)
                      +.+...+||||||+|+.++..++.. ++..++.+.|+||+..||||||+..+.+ ++..||++||.||||||+|.||+|+
T Consensus       211 ~pn~vsPvKiCDfDLgSg~k~~~~~-spastP~L~tPvGSAEfMAPEVVd~fv~-qA~~YDKrCDlwSLGvIlYImLsGY  288 (463)
T KOG0607|consen  211 SPNKVSPVKICDFDLGSGIKLNNDC-SPASTPELLTPVGSAEFMAPEVVDVFVD-QATFYDKRCDLWSLGVILYIMLSGY  288 (463)
T ss_pred             CCCCcCceeeeccccccccccCCCC-CCCCCccccCcccchhhcchhHHhhhcc-ccccccccccHHHHHHHHHHHHhCC
Confidence            9999999999999999998887654 4888999999999999999999987655 4678999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       348 ~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      +||.|.++.||+|.+++.|..|++.+|+.|+.|.|+||+.+|..||.+++|||++||.+|+.+|++|.++++|||+....
T Consensus       289 pPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  289 PPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             CCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCCCCCCccccccchhHHHhHHHHHHHhhhhhhhhccccccCCcccccccCCCCCCCCCCChhHHHHHHHhhh
Q psy16343        428 TAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRLSPPSESLLVQRRQRLQ  502 (539)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~rr~~~~  502 (539)
                      .. ..+++|++++++.+.-+++.|+..+++.+|.+.++++.+..   ......-......|+..+.++.||...+
T Consensus       369 ~e-kalptp~v~~r~~s~~~lslfa~~aia~~R~~~~h~i~~p~---~~~~~a~c~i~~~p~~~~~l~r~k~~a~  439 (463)
T KOG0607|consen  369 PE-KALPTPQVLQRNSSTMDLSLFAAEAIALNRQLSQHEIEEPE---WALADALCSIKLSPPCKSRLARRKALAQ  439 (463)
T ss_pred             hh-ccCCCCcccccCccchhhHHHHHHHHHHhhccchhcccChH---HHhhccccccccCCCCchhhhhhhhhcc
Confidence            54 56789999999999889999999999999999888754321   1111122346778888888887775433

>KOG0615|consensus

Probab=100.00  E-value=5.1e-58  Score=450.68  Aligned_cols=269  Identities=32%  Similarity=0.554  Sum_probs=208.2

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-------CCHHHHHHHHHHHHhhcCCCCeeeeeeee
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-------HSRSRVFKEVETFHHCQGHPNIIQLLEYY  115 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~  115 (539)
                      ..|.+.|.+ .+.||+|+||.|.+|.++.||+.||||+|++...       .....+.+|+++|+++ +|||||+++++|
T Consensus       168 ks~~d~yii-~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f  245 (475)
T KOG0615|consen  168 KSFNDYYII-SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFF  245 (475)
T ss_pred             chhcceeEe-eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeee
Confidence            347777775 7889999999999999999999999999976431       1234568999999997 599999999999


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      +..+..|   .|      +|.+-                 + |              +++..+-...|..        +.
T Consensus       246 ~~~ds~Y---mV------lE~v~-----------------G-G--------------eLfd~vv~nk~l~--------ed  276 (475)
T KOG0615|consen  246 EVPDSSY---MV------LEYVE-----------------G-G--------------ELFDKVVANKYLR--------ED  276 (475)
T ss_pred             ecCCceE---EE------EEEec-----------------C-c--------------cHHHHHHhccccc--------cc
Confidence            9887655   22      22221                 1 1              2222221111100        00


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                      ..            --                     +.+|   ++.|+.|+|  ++||+||||||||||+..+.....+
T Consensus       277 ~~------------K~---------------------~f~Q---ll~avkYLH--~~GI~HRDiKPeNILl~~~~e~~ll  318 (475)
T KOG0615|consen  277 LG------------KL---------------------LFKQ---LLTAVKYLH--SQGIIHRDIKPENILLSNDAEDCLL  318 (475)
T ss_pred             hh------------HH---------------------HHHH---HHHHHHHHH--HcCcccccCCcceEEeccCCcceEE
Confidence            00            01                     3344   566777888  9999999999999999877666779


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||+|+.....         ..+.|+||||.|+||||+...   ....|..++||||||||||.+|+|++||.+...
T Consensus       319 KItDFGlAK~~g~~---------sfm~TlCGTpsYvAPEVl~~k---g~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~  386 (475)
T KOG0615|consen  319 KITDFGLAKVSGEG---------SFMKTLCGTPSYVAPEVLASK---GVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT  386 (475)
T ss_pred             Eecccchhhccccc---------eehhhhcCCccccChhheecC---CeecccchheeeeccceEEEEeccCCCcccccC
Confidence            99999999865421         246799999999999999741   123455699999999999999999999987643


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .              ..+.+.|..|.|.|-+..|..+|++++|||.+||++||++|+|++|+|+||||...
T Consensus       387 ~--------------~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  387 D--------------PSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             C--------------ccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence            2              22678899999999999999999999999999999999999999999999999865

>KOG0033|consensus

Probab=100.00  E-value=3.8e-57  Score=416.78  Aligned_cols=267  Identities=37%  Similarity=0.659  Sum_probs=215.8

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEec--cCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~--k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ...|.|.|++. ++||+|.|++||+|.+..||+.+|+|+|+  +......+.+.+|+.|.+.++ |||||+|++.+....
T Consensus         6 ~~~f~d~y~l~-e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~   83 (355)
T KOG0033|consen    6 STKFSDNYDVK-EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEES   83 (355)
T ss_pred             ccccchhhhHH-HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC-CCcEeehhhhhcccc
Confidence            34589999984 77999999999999999999999999996  444556678899999998875 999999999887765


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .++   .|      .||+-                 |.               +++-          |+...        
T Consensus        84 ~~y---lv------Fe~m~-----------------G~---------------dl~~----------eIV~R--------  104 (355)
T KOG0033|consen   84 FHY---LV------FDLVT-----------------GG---------------ELFE----------DIVAR--------  104 (355)
T ss_pred             eeE---EE------Eeccc-----------------ch---------------HHHH----------HHHHH--------
Confidence            444   22      22221                 10               0100          01110        


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                           .+||-.+.-                  .+++|   ++.++.|+|  .+||||||+||+|+|+.+.+....+||||
T Consensus       105 -----~~ySEa~aS------------------H~~rQ---iLeal~yCH--~n~IvHRDvkP~nllLASK~~~A~vKL~~  156 (355)
T KOG0033|consen  105 -----EFYSEADAS------------------HCIQQ---ILEALAYCH--SNGIVHRDLKPENLLLASKAKGAAVKLAD  156 (355)
T ss_pred             -----HHHHHHHHH------------------HHHHH---HHHHHHHHH--hcCceeccCChhheeeeeccCCCceeecc
Confidence                 112211111                  15677   889999999  99999999999999999988888999999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+|..+...         .....++|||.||||||+..      ..|+.++|||++|||||.||.|++||.+++     
T Consensus       157 FGvAi~l~~g---------~~~~G~~GtP~fmaPEvvrk------dpy~kpvDiW~cGViLfiLL~G~~PF~~~~-----  216 (355)
T KOG0033|consen  157 FGLAIEVNDG---------EAWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDED-----  216 (355)
T ss_pred             cceEEEeCCc---------cccccccCCCcccCHHHhhc------CCCCCcchhhhhhHHHHHHHhCCCCCCCcc-----
Confidence            9999866521         12357899999999999974      689999999999999999999999999864     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                                +..++++|..|.|++|.++|+++|++|+|||++||..||.+|+||.|+|+|||+....
T Consensus       217 ----------~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~  274 (355)
T KOG0033|consen  217 ----------QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE  274 (355)
T ss_pred             ----------HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence                      5679999999999999999999999999999999999999999999999999998654

>KOG0604|consensus

Probab=100.00  E-value=1.9e-54  Score=409.32  Aligned_cols=275  Identities=36%  Similarity=0.653  Sum_probs=213.7

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .....+.|.+..++||-|-.|.|..|.++.|++.+|+|++..     .....+||++.-.+.+|||||.++|+|++.-..
T Consensus        56 ~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~  130 (400)
T KOG0604|consen   56 EYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQG  130 (400)
T ss_pred             cccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence            344678898888999999999999999999999999999853     245678999888788999999999999864321


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ..-..||     +|++-                 | |              +++.++...+      -..|.|++     
T Consensus       131 rkcLLiV-----mE~me-----------------G-G--------------eLfsriq~~g------~~afTEre-----  162 (400)
T KOG0604|consen  131 RKCLLIV-----MECME-----------------G-G--------------ELFSRIQDRG------DQAFTERE-----  162 (400)
T ss_pred             ceeeEee-----eeccc-----------------c-h--------------HHHHHHHHcc------cccchHHH-----
Confidence            1000111     11110                 1 1              2332221110      00122222     


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                                  ...++++   +..|+.|+|  +.+|.||||||||+|++....+..+||+|||
T Consensus       163 ----------------------------a~eI~~q---I~~Av~~lH--~~nIAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  163 ----------------------------ASEIMKQ---IGLAVRYLH--SMNIAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             ----------------------------HHHHHHH---HHHHHHHHH--hcchhhccCChhheeeecCCCCcceEecccc
Confidence                                        2227777   888888888  8999999999999999988888899999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ||+.-..+         ..+.|+|.||+|+||||+..      +.||.+||+||+|||+|.||||+|||+......    
T Consensus       210 FAK~t~~~---------~~L~TPc~TPyYvaPevlg~------eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a----  270 (400)
T KOG0604|consen  210 FAKETQEP---------GDLMTPCFTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA----  270 (400)
T ss_pred             cccccCCC---------ccccCCcccccccCHHHhCc------hhcCCCCCccchhHHHHHhhcCCCcccccCCcc----
Confidence            99853321         24789999999999999853      569999999999999999999999999876422    


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                             ...-+..+|..|.|.||.++|+.+|+++||+|++||..||.+|+|++|++.|||+.....
T Consensus       271 -------ispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  271 -------ISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             -------CChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence                   122367889999999999999999999999999999999999999999999999987544

>KOG0575|consensus

Probab=100.00  E-value=6.4e-53  Score=434.07  Aligned_cols=255  Identities=33%  Similarity=0.565  Sum_probs=207.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      ..|. .+++||+|||+.||++++..+|+.||+|+|.|.   ..+.++++.+||++.+.+ +|||||+++.+|+|.++.| 
T Consensus        18 ~~Y~-~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVY-   94 (592)
T KOG0575|consen   18 KRYK-RGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVY-   94 (592)
T ss_pred             ceee-eeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceE-
Confidence            3454 489999999999999999999999999999863   345678899999999997 5999999999999987766 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .+                    +.||+.|.-..               +...  .-....||...             
T Consensus        95 --iv--------------------LELC~~~sL~e---------------l~Kr--rk~ltEpEary-------------  122 (592)
T KOG0575|consen   95 --IV--------------------LELCHRGSLME---------------LLKR--RKPLTEPEARY-------------  122 (592)
T ss_pred             --EE--------------------EEecCCccHHH---------------HHHh--cCCCCcHHHHH-------------
Confidence              11                    23444432111               0000  01122333321             


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                   +.+|   +++++.|+|  ++||||||||..||++   +...+|||+|||||
T Consensus       123 -----------------------------~l~Q---Iv~GlkYLH--~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLA  165 (592)
T KOG0575|consen  123 -----------------------------FLRQ---IVEGLKYLH--SLGIIHRDLKLGNLFL---NENMNVKIGDFGLA  165 (592)
T ss_pred             -----------------------------HHHH---HHHHHHHHH--hcCceecccchhheee---cCcCcEEeccccee
Confidence                                         5667   888899999  9999999999999999   44557999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+.....        ...|.||||+|+||||+.+      ++|+..+||||+|||||.||.|+|||..++         
T Consensus       166 t~le~~~E--------rk~TlCGTPNYIAPEVl~k------~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---------  222 (592)
T KOG0575|consen  166 TQLEYDGE--------RKKTLCGTPNYIAPEVLNK------SGHSFEVDIWSLGCVMYTLLVGRPPFETKT---------  222 (592)
T ss_pred             eeecCccc--------ccceecCCCcccChhHhcc------CCCCCchhhhhhhhHHHhhhhCCCCcccch---------
Confidence            98765432        3569999999999999973      689999999999999999999999998653         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            -++++.+|...+|.+|.    .+|.+|+|||.+||..||.+|||+++||.|+||...
T Consensus       223 ------vkety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  223 ------VKETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             ------HHHHHHHHHhcCccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence                  45689999999999996    799999999999999999999999999999999543

>KOG0599|consensus

Probab=100.00  E-value=4.6e-53  Score=395.12  Aligned_cols=266  Identities=36%  Similarity=0.575  Sum_probs=210.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-----CC---CHHHHHHHHHHHHhhcCCCCeeeeeeeec
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-----GH---SRSRVFKEVETFHHCQGHPNIIQLLEYYE  116 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-----~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~  116 (539)
                      |-..|+- .++||.|..++|.+|.++.||.++|+|+|....     ..   .++...+|+.||+++.+||+|++|.|+|+
T Consensus        15 fy~~y~p-keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   15 FYAKYEP-KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             HHhhcCh-HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            4455553 478999999999999999999999999996321     11   12345679999999999999999999999


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccc-cCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~-~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      .+....   .|                         |++.. |              ++++...+        .-.+.+.
T Consensus        94 s~sF~F---lV-------------------------Fdl~prG--------------ELFDyLts--------~VtlSEK  123 (411)
T KOG0599|consen   94 SDAFVF---LV-------------------------FDLMPRG--------------ELFDYLTS--------KVTLSEK  123 (411)
T ss_pred             Ccchhh---hh-------------------------hhhcccc--------------hHHHHhhh--------heeecHH
Confidence            875433   11                         11110 1              22221111        0001111


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                      ++..                                 +++|   +..++.|+|  .++||||||||||||+   +++.+|
T Consensus       124 ~tR~---------------------------------iMrq---lfegVeylH--a~~IVHRDLKpENILl---ddn~~i  162 (411)
T KOG0599|consen  124 ETRR---------------------------------IMRQ---LFEGVEYLH--ARNIVHRDLKPENILL---DDNMNI  162 (411)
T ss_pred             HHHH---------------------------------HHHH---HHHHHHHHH--HhhhhhcccChhheee---ccccce
Confidence            1111                                 7777   889999999  9999999999999999   445679


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||||+.+..+.         .+...||||.|.|||++.+.+.....+|+..+|+||+|||+|.||.|.+||...  
T Consensus       163 ~isDFGFa~~l~~Ge---------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--  231 (411)
T KOG0599|consen  163 KISDFGFACQLEPGE---------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--  231 (411)
T ss_pred             EEeccceeeccCCch---------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--
Confidence            999999999776543         467889999999999999866656789999999999999999999999999753  


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                   .+..++..|..|+|.|-.++|.++|.++||||++||++||.+|+|++|+|+||||...
T Consensus       232 -------------kQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  232 -------------KQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             -------------HHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence                         2455778899999999999999999999999999999999999999999999999643

>KOG0598|consensus

Probab=100.00  E-value=9.7e-52  Score=403.82  Aligned_cols=257  Identities=31%  Similarity=0.512  Sum_probs=197.7

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .++||+|+||+|++++.+.|++.||+|+|+|...   .....+..|..+|..+ +||+||+|+..|++.+..+   
T Consensus        27 F~~-lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLy---  101 (357)
T KOG0598|consen   27 FEI-LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLY---  101 (357)
T ss_pred             eee-eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEE---
Confidence            443 4789999999999999999999999999987542   3456788999999995 6999999999999987665   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .||=.| |              +++..+..        -..|.+..         
T Consensus       102 lV-----------------------ld~~~G-G--------------eLf~hL~~--------eg~F~E~~---------  126 (357)
T KOG0598|consen  102 LV-----------------------LDYLNG-G--------------ELFYHLQR--------EGRFSEDR---------  126 (357)
T ss_pred             EE-----------------------EeccCC-c--------------cHHHHHHh--------cCCcchhH---------
Confidence            22                       222112 1              11111100        00111110         


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                              .++|..+   +++|+.|+|  ++|||||||||||||+   +..|+|+|+||||++.
T Consensus       127 ------------------------arfYlaE---i~lAL~~LH--~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~  174 (357)
T KOG0598|consen  127 ------------------------ARFYLAE---IVLALGYLH--SKGIIYRDLKPENILL---DEQGHIKLTDFGLCKE  174 (357)
T ss_pred             ------------------------HHHHHHH---HHHHHHHHH--hCCeeeccCCHHHeee---cCCCcEEEeccccchh
Confidence                                    1124444   777788877  9999999999999999   6668899999999984


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .-....        ...|+|||+.|||||++.+      .+|+..||||||||++|+||+|.+||.+.+           
T Consensus       175 ~~~~~~--------~t~tfcGT~eYmAPEil~~------~gy~~~vDWWsLGillYeML~G~pPF~~~~-----------  229 (357)
T KOG0598|consen  175 DLKDGD--------ATRTFCGTPEYMAPEILLG------KGYDKAVDWWSLGILLYEMLTGKPPFYAED-----------  229 (357)
T ss_pred             cccCCC--------ccccccCCccccChHHHhc------CCCCcccchHhHHHHHHHHhhCCCCCcCcc-----------
Confidence            322211        2357999999999999974      589999999999999999999999999875           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC----CHHHHhcCCCccCCCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL----SAASVLKHPWISTAGTA  429 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~----ta~e~l~Hpw~~~~~~~  429 (539)
                          ...+.++|..++..+++.   .+|.+++|||++||.+||.+|+    .++++.+||||...+|.
T Consensus       230 ----~~~~~~~I~~~k~~~~p~---~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  230 ----VKKMYDKILKGKLPLPPG---YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             ----HHHHHHHHhcCcCCCCCc---cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence                345788899988555542   4799999999999999999997    48899999999988874

>KOG0605|consensus

Probab=100.00  E-value=3e-50  Score=408.25  Aligned_cols=285  Identities=31%  Similarity=0.490  Sum_probs=211.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ..+||+|+||.||+|+.+.||..||+|+++|..+.   ....+..|-.+|.. .++|+||+|+..|++.++.|   .|  
T Consensus       146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LY---Li--  219 (550)
T KOG0605|consen  146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLY---LI--  219 (550)
T ss_pred             heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeE---EE--
Confidence            46899999999999999999999999999886543   34567789999988 57999999999999988877   33  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-    ++       ||  .                .++...++   +        .+               
T Consensus       220 ----MEylP----GG-------D~--m----------------TLL~~~~~---L--------~e---------------  240 (550)
T KOG0605|consen  220 ----MEYLP----GG-------DM--M----------------TLLMRKDT---L--------TE---------------  240 (550)
T ss_pred             ----EEecC----Cc-------cH--H----------------HHHHhcCc---C--------ch---------------
Confidence                44332    10       11  0                01111111   0        00               


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                        ...++++.+   .++|+.-+|  +.|+|||||||+|+|+   |..|+|||+||||++.+...
T Consensus       241 ------------------~~arfYiaE---~vlAI~~iH--~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~  294 (550)
T KOG0605|consen  241 ------------------DWARFYIAE---TVLAIESIH--QLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKK  294 (550)
T ss_pred             ------------------HHHHHHHHH---HHHHHHHHH--HcCcccccCChhheee---cCCCCEeeccccccchhhhh
Confidence                              011123444   556777778  9999999999999999   67788999999998754221


Q ss_pred             CCC----------------C--C-C-----C---------------CCCCccccccCcccccchhhcccCCCCCCCCCcc
Q psy16343        290 TSV----------------H--S-P-----L---------------ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  330 (539)
Q Consensus       290 ~~~----------------~--~-~-----~---------------~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~  330 (539)
                      ...                .  . +     .               ........+|||.||||||+.+      .+|+..
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~------kgY~~~  368 (550)
T KOG0605|consen  295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG------KGYGKE  368 (550)
T ss_pred             hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc------CCCCcc
Confidence            000                0  0 0     0               0012345799999999999974      689999


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccc
Q psy16343        331 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDA  408 (539)
Q Consensus       331 ~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP  408 (539)
                      |||||||||+||||.|+|||.+++               ..+++.+|.+..  +.||..  ..+|++|+|||.+||+ ||
T Consensus       369 cDwWSLG~ImyEmLvGyPPF~s~t---------------p~~T~rkI~nwr~~l~fP~~--~~~s~eA~DLI~rll~-d~  430 (550)
T KOG0605|consen  369 CDWWSLGCIMYEMLVGYPPFCSET---------------PQETYRKIVNWRETLKFPEE--VDLSDEAKDLITRLLC-DP  430 (550)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCCC---------------HHHHHHHHHHHhhhccCCCc--CcccHHHHHHHHHHhc-CH
Confidence            999999999999999999999876               345788888766  677765  4789999999999999 99


Q ss_pred             cCCCC---HHHHhcCCCccCCCCCCCCCCCCccccccchhHHHhHHH
Q psy16343        409 RKRLS---AASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFA  452 (539)
Q Consensus       409 ~~R~t---a~e~l~Hpw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  452 (539)
                      .+|+.   ++||.+||||++..|...--..++.++...+..+..+|.
T Consensus       431 ~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~v~~~~DT~yFd  477 (550)
T KOG0605|consen  431 ENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVPQVNSELDTQYFD  477 (550)
T ss_pred             HHhcCcccHHHHhcCCccccCCcchhhcCCCCCCCCCCCcccccccc
Confidence            99996   899999999999999754444455555566666666654

>KOG0616|consensus

Probab=100.00  E-value=1.6e-50  Score=382.81  Aligned_cols=250  Identities=31%  Similarity=0.550  Sum_probs=200.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ...||.|+||.|.+++++.+|..||+|++++...   ...++..+|..+|+.+. ||+|++|...|.+..+.+   .|  
T Consensus        49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~ly---mv--  122 (355)
T KOG0616|consen   49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLY---MV--  122 (355)
T ss_pred             eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEE---EE--
Confidence            3689999999999999999999999999987543   23345678999999875 999999999998877665   22  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          ++.+.                 | +              +++.....        ...|.++.+            
T Consensus       123 ----meyv~-----------------G-G--------------ElFS~Lrk--------~~rF~e~~a------------  146 (355)
T KOG0616|consen  123 ----MEYVP-----------------G-G--------------ELFSYLRK--------SGRFSEPHA------------  146 (355)
T ss_pred             ----EeccC-----------------C-c--------------cHHHHHHh--------cCCCCchhH------------
Confidence                22221                 1 1              12111111        111222211            


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           .++..+   +++|+.|+|  +++|++|||||||||+   +..|.+||+|||||+.+.. 
T Consensus       147 ---------------------rFYAAe---ivlAleylH--~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~-  196 (355)
T KOG0616|consen  147 ---------------------RFYAAE---IVLALEYLH--SLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSG-  196 (355)
T ss_pred             ---------------------HHHHHH---HHHHHHHHH--hcCeeeccCChHHeee---ccCCcEEEEeccceEEecC-
Confidence                                 124445   788999999  9999999999999999   6778899999999986643 


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                                ...|.||||.|+|||++..      .+|++++|||||||+.|||++|++||++.+.              
T Consensus       197 ----------rT~TlCGTPeYLAPEii~s------k~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------------  246 (355)
T KOG0616|consen  197 ----------RTWTLCGTPEYLAPEIIQS------KGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------------  246 (355)
T ss_pred             ----------cEEEecCCccccChHHhhc------CCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------------
Confidence                      2468999999999999973      6899999999999999999999999998753              


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGTA  429 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~~  429 (539)
                       ..++++|..+++.||.    .+|++++|||++||++|-.+|.     +..++..||||++..|.
T Consensus       247 -~~iY~KI~~~~v~fP~----~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~  306 (355)
T KOG0616|consen  247 -IQIYEKILEGKVKFPS----YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWE  306 (355)
T ss_pred             -HHHHHHHHhCcccCCc----ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHH
Confidence             4589999999999996    7999999999999999999996     47899999999988774

>KOG0592|consensus

Probab=100.00  E-value=1.9e-50  Score=409.26  Aligned_cols=263  Identities=32%  Similarity=0.526  Sum_probs=200.7

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +++||+|+|++|++|+++.++.+||||+++|..   .....-+.+|-++|.++.+||.||+|+..|+|....|   .+  
T Consensus        78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY---Fv--  152 (604)
T KOG0592|consen   78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY---FV--  152 (604)
T ss_pred             hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE---EE--
Confidence            789999999999999999999999999997642   2223456788889999889999999999999988766   22  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          .|.                   +..-             +++..+..        ...+.+.++.           
T Consensus       153 ----Le~-------------------A~nG-------------dll~~i~K--------~Gsfde~caR-----------  177 (604)
T KOG0592|consen  153 ----LEY-------------------APNG-------------DLLDLIKK--------YGSFDETCAR-----------  177 (604)
T ss_pred             ----EEe-------------------cCCC-------------cHHHHHHH--------hCcchHHHHH-----------
Confidence                010                   1000             11111100        0001100000           


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                            ++..+   ++.++.|+|  ++|||||||||||||+   +.++++||+|||-|+.+...
T Consensus       178 ----------------------~YAAe---IldAleylH--~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  178 ----------------------FYAAE---ILDALEYLH--SNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             ----------------------HHHHH---HHHHHHHHH--hcCceeccCChhheeE---cCCCcEEEeeccccccCChh
Confidence                                  02333   778888888  9999999999999999   56678999999999866543


Q ss_pred             CCC-----CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        290 TSV-----HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       290 ~~~-----~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ...     ..........+++||..|++||+|..      ..-+..+|||+||||+|+|+.|.|||.+.+          
T Consensus       228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~------~~~~~~sDiWAlGCilyQmlaG~PPFra~N----------  291 (604)
T KOG0592|consen  228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLND------SPAGPSSDLWALGCILYQMLAGQPPFRAAN----------  291 (604)
T ss_pred             hccccCccCcccccCcccceeeeecccCHHHhcC------CCCCcccchHHHHHHHHHHhcCCCCCcccc----------
Confidence            221     11111223467999999999999973      345678999999999999999999999875          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH  430 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~~  430 (539)
                           ...+|++|..-.|.||+    .+++.++|||+++|++||.+|+|++||.+||||.+.+|..
T Consensus       292 -----eyliFqkI~~l~y~fp~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  292 -----EYLIFQKIQALDYEFPE----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             -----HHHHHHHHHHhcccCCC----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence                 34689999999999997    5899999999999999999999999999999999988764

>KOG0032|consensus

Probab=100.00  E-value=6.9e-49  Score=404.29  Aligned_cols=269  Identities=39%  Similarity=0.681  Sum_probs=215.2

Q ss_pred             ccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        41 ~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      ....+.+.|.+ ++.||+|.||+||+|+++.||+.+|+|+|.|....   ....+.+|+++|+++.+|||||+++++|++
T Consensus        29 ~~~~~~~~Y~l-~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~  107 (382)
T KOG0032|consen   29 FSEDIKEKYEL-GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED  107 (382)
T ss_pred             ccccccccEEe-hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence            45668888987 58899999999999999999999999999875442   346889999999998889999999999998


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|      +|              +++   + +              +++..+....         +.+.++
T Consensus       108 ~~~~~---lv------mE--------------L~~---G-G--------------eLfd~i~~~~---------~sE~da  137 (382)
T KOG0032|consen  108 PDSVY---LV------ME--------------LCE---G-G--------------ELFDRIVKKH---------YSERDA  137 (382)
T ss_pred             CCeEE---EE------EE--------------ecC---C-c--------------hHHHHHHHcc---------CCHHHH
Confidence            76443   12      11              111   1 1              2222221110         111111


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-CCCce
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-LSPVK  276 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-~~~ik  276 (539)
                                                       ..+.++   ++.++.|+|  +.||+||||||||+|+...+. .+.+|
T Consensus       138 ---------------------------------~~~~~~---il~av~~lH--~~gvvHrDlKpEN~L~~~~~~~~~~ik  179 (382)
T KOG0032|consen  138 ---------------------------------AGIIRQ---ILEAVKYLH--SLGVVHRDLKPENLLLASKDEGSGRIK  179 (382)
T ss_pred             ---------------------------------HHHHHH---HHHHHHHHH--hCCceeccCCHHHeeeccccCCCCcEE
Confidence                                             114555   788888999  899999999999999987654 45899


Q ss_pred             eccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCC
Q psy16343        277 LCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE  356 (539)
Q Consensus       277 l~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~  356 (539)
                      ++|||+|......         ..+.+.||||.|+|||++..      .+|+..+||||+|||+|.||+|.+||.+.+. 
T Consensus       180 ~~DFGla~~~~~~---------~~~~~~~Gtp~y~APEvl~~------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~-  243 (382)
T KOG0032|consen  180 LIDFGLAKFIKPG---------ERLHTIVGTPEYVAPEVLGG------RPYGDEVDVWSIGVILYILLSGVPPFWGETE-  243 (382)
T ss_pred             EeeCCCceEccCC---------ceEeeecCCccccCchhhcC------CCCCcccchhHHHHHHHHHhhCCCCCcCCCh-
Confidence            9999999865432         24678999999999999963      5899999999999999999999999998753 


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                    ...+..|..+.+.|+.+.|..+|..|+|||++||..||.+|+||.++|+|||+.....
T Consensus       244 --------------~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~  301 (382)
T KOG0032|consen  244 --------------FEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGE  301 (382)
T ss_pred             --------------hHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcc
Confidence                          3466789999999999999999999999999999999999999999999999987643

>KOG0588|consensus

Probab=100.00  E-value=1.4e-49  Score=410.48  Aligned_cols=254  Identities=32%  Similarity=0.516  Sum_probs=200.5

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      -|++ |+.||.|+-|.|.+|++..||+.+|||+|.+...   .....+.+||-+|+.+ .||||++|+|+|++....|  
T Consensus        13 pwkL-gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~ly--   88 (786)
T KOG0588|consen   13 PWKL-GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLY--   88 (786)
T ss_pred             ceec-cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEE--
Confidence            3554 7899999999999999999999999999987532   2345688999999876 5999999999999887665  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                       .+      .|.+-                 + |              ++|..+ ..-..+.+|.+         .    
T Consensus        89 -lv------lEyv~-----------------g-G--------------ELFdylv~kG~l~e~eaa---------~----  116 (786)
T KOG0588|consen   89 -LV------LEYVP-----------------G-G--------------ELFDYLVRKGPLPEREAA---------H----  116 (786)
T ss_pred             -EE------EEecC-----------------C-c--------------hhHHHHHhhCCCCCHHHH---------H----
Confidence             22      11111                 0 1              122111 01011222222         1    


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                   +++|   +++++.|+|  .-+|+||||||||+|+.   ..++|||+|||+|
T Consensus       117 -----------------------------ff~Q---Ii~gv~yCH--~~~icHRDLKpENlLLd---~~~nIKIADFGMA  159 (786)
T KOG0588|consen  117 -----------------------------FFRQ---ILDGVSYCH--AFNICHRDLKPENLLLD---VKNNIKIADFGMA  159 (786)
T ss_pred             -----------------------------HHHH---HHHHHHHHh--hhcceeccCCchhhhhh---cccCEeeecccee
Confidence                                         5667   889999999  88999999999999995   4445999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      .....         ..++.|.||+|+|.||||+.+      ..|+ .++||||||||||.||+|+.||.+++        
T Consensus       160 sLe~~---------gklLeTSCGSPHYA~PEIV~G------~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--------  216 (786)
T KOG0588|consen  160 SLEVP---------GKLLETSCGSPHYAAPEIVSG------RPYDGRPSDVWSCGVILFALLTGKLPFDDDN--------  216 (786)
T ss_pred             ecccC---------CccccccCCCcccCCchhhcC------CCCCCCccccchhHHHHHHHHhCCCCCCCcc--------
Confidence            74322         236789999999999999974      4675 78999999999999999999998654        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                             ...++.+++.|.|.+|.    .+|.+|+|||.+||.+||.+|+|.+||++|||+.+...
T Consensus       217 -------ir~LLlKV~~G~f~MPs----~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  217 -------IRVLLLKVQRGVFEMPS----NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             -------HHHHHHHHHcCcccCCC----cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence                   45688999999999994    79999999999999999999999999999999987654

>KOG0593|consensus

Probab=100.00  E-value=1.1e-49  Score=377.80  Aligned_cols=273  Identities=26%  Similarity=0.387  Sum_probs=192.8

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|+.. ..+|+|+||+||+|+++.||+.||||++-....  ...+-.+|||++|+++ .|+|+|.|+|+|......+  
T Consensus         2 ekYE~L-gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklh--   77 (396)
T KOG0593|consen    2 EKYEKL-GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLH--   77 (396)
T ss_pred             cHHhhh-hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeE--
Confidence            356643 458999999999999999999999999854332  2234568999999997 5999999999997765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      .|.              ||--+-.               ++.   .-+.=+++|.+..             
T Consensus        78 -LV------FE~--------------~dhTvL~---------------eLe---~~p~G~~~~~vk~-------------  105 (396)
T KOG0593|consen   78 -LV------FEY--------------CDHTVLH---------------ELE---RYPNGVPSELVKK-------------  105 (396)
T ss_pred             -EE------eee--------------cchHHHH---------------HHH---hccCCCCHHHHHH-------------
Confidence             12      111              1100000               000   0011122232221             


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                                  +..|   ++.++.|+|  +++||||||||||||++   ..+.+||||||||+
T Consensus       106 ----------------------------~l~Q---~l~ai~~cH--k~n~IHRDIKPENILit---~~gvvKLCDFGFAR  149 (396)
T KOG0593|consen  106 ----------------------------YLYQ---LLKAIHFCH--KNNCIHRDIKPENILIT---QNGVVKLCDFGFAR  149 (396)
T ss_pred             ----------------------------HHHH---HHHHhhhhh--hcCeecccCChhheEEe---cCCcEEeccchhhH
Confidence                                        2333   667888999  99999999999999995   44569999999999


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+.....        ..+.++.|+||+|||.+.+     ...|+.++||||+||++.||++|.|.|+|.++.|+++.+..
T Consensus       150 ~L~~pgd--------~YTDYVATRWYRaPELLvG-----DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~k  216 (396)
T KOG0593|consen  150 TLSAPGD--------NYTDYVATRWYRAPELLVG-----DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRK  216 (396)
T ss_pred             hhcCCcc--------hhhhhhhhhhccChhhhcc-----cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHH
Confidence            7654332        2346899999999999975     36799999999999999999999999999998887665422


Q ss_pred             cchhhHHHHHHHHhcCC-----CCCCC--------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        365 TCHACQEILFHSIQQGH-----YDFPE--------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~-----~~~p~--------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ..+.-.-. .+.|-...     ..+|+        ..++.+|.-+.||+++||..||.+|++.+|+|.||||.+
T Consensus       217 tLG~L~pr-hq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  217 TLGNLIPR-HQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             HHcccCHH-HHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            21110000 01111111     12332        235678999999999999999999999999999999954

>KOG0603|consensus

Probab=100.00  E-value=6.5e-48  Score=399.34  Aligned_cols=303  Identities=33%  Similarity=0.527  Sum_probs=234.3

Q ss_pred             eeceeCceEEEEEEE---ccCCcEEEEEEeccCCCCC--HHHHHHHHHHHHhhcCCCCeeeeeeeeccccc---------
Q psy16343         55 ILGKGAYASVQTCVN---ILTELEYAVKIIDKLPGHS--RSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN---------  120 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~---~~t~~~vAvK~i~k~~~~~--~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~---------  120 (539)
                      ++|+|+||.|++++.   ...|..||+|+..+.....  +.....|..++..+..||.+|+++..|+.+..         
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999987653   3456789999997653221  12334567777777779999999988765431         


Q ss_pred             -------------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCC
Q psy16343        121 -------------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL  169 (539)
Q Consensus       121 -------------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~  169 (539)
                                                     +.|..+|++||+|++||++   +..+++++.|||+.+.....+      
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~------  151 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEK------  151 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhh------
Confidence                                           2355689999999999999   677889999999875432111      


Q ss_pred             CCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC-----------------------
Q psy16343        170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN-----------------------  226 (539)
Q Consensus       170 ~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~-----------------------  226 (539)
                            ..|||..|||||+++        ++..++|+||||+++++|++|..||.+.                       
T Consensus       152 ------~~cgt~eymApEI~~--------gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~  217 (612)
T KOG0603|consen  152 ------IACGTYEYRAPEIIN--------GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSL  217 (612)
T ss_pred             ------hcccchhhhhhHhhh--------ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHH
Confidence                  127899999999985        4667899999999999999999887650                       


Q ss_pred             --------------CCCCC-------------C-----------------------------------------------
Q psy16343        227 --------------CGEDC-------------G-----------------------------------------------  232 (539)
Q Consensus       227 --------------~~~~~-------------~-----------------------------------------------  232 (539)
                                    .+.+.             .                                               
T Consensus       218 ~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~P~dsp~~~~~~s~  297 (612)
T KOG0603|consen  218 FRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQVPADSPLLSASGSD  297 (612)
T ss_pred             HHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCCcccCCCCCCCccc
Confidence                          00000             0                                               


Q ss_pred             --------------------------------------------------------------------------------
Q psy16343        233 --------------------------------------------------------------------------------  232 (539)
Q Consensus       233 --------------------------------------------------------------------------------  232 (539)
                                                                                                      
T Consensus       298 ~~if~g~sfva~~il~~~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~n  377 (612)
T KOG0603|consen  298 HTIFSGPSFVAPGVLEDAVTAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPN  377 (612)
T ss_pred             cchhcCCCccChHHhhccccCCcchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCc
Confidence                                                                                            


Q ss_pred             ------------------------------------------ccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC
Q psy16343        233 ------------------------------------------WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD  270 (539)
Q Consensus       233 ------------------------------------------~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~  270 (539)
                                                                |.++   ++.++.|+|  .+|||||||||+|||+.  +
T Consensus       378 iv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~---lv~Av~~LH--~~gvvhRDLkp~NIL~~--~  450 (612)
T KOG0603|consen  378 IVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAE---LVSAVDYLH--EQGVVHRDLKPGNILLD--G  450 (612)
T ss_pred             ceeecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHH---HHHHHHHHH--hcCeeecCCChhheeec--C
Confidence                                                      0000   113344555  99999999999999995  3


Q ss_pred             CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCC
Q psy16343        271 QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF  350 (539)
Q Consensus       271 ~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF  350 (539)
                      ..++|+|+|||+++.....           +.++|-|..|.|||++.      .++|+.+|||||||++||+||+|++||
T Consensus       451 ~~g~lrltyFG~a~~~~~~-----------~~tp~~t~~y~APEvl~------~~~yt~acD~WSLGvlLy~ML~G~tp~  513 (612)
T KOG0603|consen  451 SAGHLRLTYFGFWSELERS-----------CDTPALTLQYVAPEVLA------IQEYTEACDWWSLGVLLYEMLTGRTLF  513 (612)
T ss_pred             CCCcEEEEEechhhhCchh-----------hcccchhhcccChhhhc------cCCCCcchhhHHHHHHHHHHHhCCCcc
Confidence            4567999999999865321           45889999999999996      368999999999999999999999999


Q ss_pred             CCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      .....              ...++.+|..+++.      ..+|++|||||++||+.||.+|+++++++.||||.
T Consensus       514 ~~~P~--------------~~ei~~~i~~~~~s------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~  567 (612)
T KOG0603|consen  514 AAHPA--------------GIEIHTRIQMPKFS------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFL  567 (612)
T ss_pred             ccCCc--------------hHHHHHhhcCCccc------cccCHHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence            86532              24578888877665      36999999999999999999999999999999993

>KOG0583|consensus

Probab=100.00  E-value=4.2e-47  Score=391.14  Aligned_cols=258  Identities=34%  Similarity=0.583  Sum_probs=200.2

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC----C-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP----G-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~----~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ....|.+ ++.||+|+||+|+.|.+..+++.||||++++..    . .....+.+|+.+++.+..||||+++++++....
T Consensus        15 ~~g~y~~-~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   15 SIGKYEL-GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             ccCceee-eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3445665 788999999999999999999999999887641    1 234567789999999877999999999998766


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|                       .+|+.+ +              ++++.+.....+.++            
T Consensus        94 ~~~---iv-----------------------mEy~~g-G--------------dL~~~i~~~g~l~E~------------  120 (370)
T KOG0583|consen   94 KIY---IV-----------------------MEYCSG-G--------------DLFDYIVNKGRLKED------------  120 (370)
T ss_pred             eEE---EE-----------------------EEecCC-c--------------cHHHHHHHcCCCChH------------
Confidence            533   11                       222111 1              222222221111111            


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                                                   +...+++|   ++.|+.|+|  ++||+||||||||||+..+.  +++||+|
T Consensus       121 -----------------------------~ar~~F~Q---lisav~y~H--~~gi~HRDLK~ENilld~~~--~~~Kl~D  164 (370)
T KOG0583|consen  121 -----------------------------EARKYFRQ---LISAVAYCH--SRGIVHRDLKPENILLDGNE--GNLKLSD  164 (370)
T ss_pred             -----------------------------HHHHHHHH---HHHHHHHHH--hCCEeeCCCCHHHEEecCCC--CCEEEec
Confidence                                         11126778   899999999  99999999999999995432  6799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCC-CC-cccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG-YD-KRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~-y~-~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      ||++.....        ....+.|+||||.|+|||++.+      .. |+ .++|+|||||+||.|++|+.||...+   
T Consensus       165 FG~s~~~~~--------~~~~l~t~cGsp~Y~aPEvl~~------~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~---  227 (370)
T KOG0583|consen  165 FGLSAISPG--------EDGLLKTFCGSPAYAAPEVLSG------KGTYSGKAADVWSLGVILYVLLCGRLPFDDSN---  227 (370)
T ss_pred             cccccccCC--------CCCcccCCCCCcccCCHHHhCC------CCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc---
Confidence            999985521        1225679999999999999974      34 76 78999999999999999999998743   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCC-CHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI-SDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~-s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                  ...++..|..+.+.+|.    .+ |+++++||++||+.||.+|+|+.+++.||||+.
T Consensus       228 ------------~~~l~~ki~~~~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  228 ------------VPNLYRKIRKGEFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             ------------HHHHHHHHhcCCccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                        23477789999999996    46 999999999999999999999999999999986

>KOG0694|consensus

Probab=100.00  E-value=2.8e-47  Score=396.54  Aligned_cols=278  Identities=29%  Similarity=0.470  Sum_probs=214.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ..+||+|+||+|+++..+.+++.||||+++|...   ...+....|..|+....+||.+++|+..|+..+..+   .|  
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~---fv--  447 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF---FV--  447 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE---EE--
Confidence            4689999999999999999999999999987543   334566788888887778999999999999987665   23  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+.                 | +              .++....+         ..|.+..+.           
T Consensus       448 ----mey~~-----------------G-g--------------dm~~~~~~---------~~F~e~rar-----------  471 (694)
T KOG0694|consen  448 ----MEYVA-----------------G-G--------------DLMHHIHT---------DVFSEPRAR-----------  471 (694)
T ss_pred             ----EEecC-----------------C-C--------------cEEEEEec---------ccccHHHHH-----------
Confidence                33322                 1 0              00000000         011111111           


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                         +                   |..   |+++++.|+|  ++|||+||||.+|||+   |..|.+||+||||++.....
T Consensus       472 ---f-------------------yaA---ev~l~L~fLH--~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  472 ---F-------------------YAA---EVVLGLQFLH--ENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             ---H-------------------HHH---HHHHHHHHHH--hcCceeeecchhheEE---cccCcEEecccccccccCCC
Confidence               0                   111   3778889999  9999999999999999   66778999999999854322


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .        ....|+||||.||||||+..      ..|+.++|||||||++|+||.|.+||.|++               
T Consensus       522 g--------~~TsTfCGTpey~aPEil~e------~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd---------------  572 (694)
T KOG0694|consen  522 G--------DRTSTFCGTPEFLAPEVLTE------QSYTRAVDWWGLGVLLYEMLVGESPFPGDD---------------  572 (694)
T ss_pred             C--------CccccccCChhhcChhhhcc------CcccchhhHHHHHHHHHHHHcCCCCCCCCC---------------
Confidence            1        13569999999999999973      679999999999999999999999999976               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCCCC--CCCCCCcccccc
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGTAH--RPLVTPQVIRRN  442 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~~~--~~~~~~~~~~~~  442 (539)
                      .++++..|.+.++.+|.    .+|.|+.+++++||.+||.+|+.     +++|++||||+..+|..  .....|+..+..
T Consensus       573 Eee~FdsI~~d~~~yP~----~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i  648 (694)
T KOG0694|consen  573 EEEVFDSIVNDEVRYPR----FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTI  648 (694)
T ss_pred             HHHHHHHHhcCCCCCCC----cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCccc
Confidence            46799999999999995    69999999999999999999996     57899999999988742  233455556666


Q ss_pred             chhHHHhHHHHH
Q psy16343        443 QSARELSSFAES  454 (539)
Q Consensus       443 ~~~~~~~~~~~~  454 (539)
                      .+.++.++|.++
T Consensus       649 ~~~~D~snFd~e  660 (694)
T KOG0694|consen  649 KGPEDVSNFDEE  660 (694)
T ss_pred             CChhhhcccchh
Confidence            677777777654

>KOG0659|consensus

Probab=100.00  E-value=4.4e-47  Score=354.54  Aligned_cols=270  Identities=26%  Similarity=0.356  Sum_probs=187.0

Q ss_pred             cCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +.+.||+|+||+||+|++..||+.||||.|+...  ..-.....|||+.|+.+. |+|||.|+|+|....+.......+-
T Consensus         6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lVfEfm~   84 (318)
T KOG0659|consen    6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLVFEFMP   84 (318)
T ss_pred             hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEEEEecc
Confidence            3578999999999999999999999999996432  222346789999999975 9999999999977654321000100


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                      -|  .|++                     ++.                  ..-+.+|                 .||=| 
T Consensus        85 td--Le~v---------------------Ikd------------------~~i~l~p-----------------a~iK~-  105 (318)
T KOG0659|consen   85 TD--LEVV---------------------IKD------------------KNIILSP-----------------ADIKS-  105 (318)
T ss_pred             cc--HHHH---------------------hcc------------------cccccCH-----------------HHHHH-
Confidence            00  0000                     000                  0001111                 12211 


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                             |+.+   .+.+++|+|  ++.|+||||||.|+|+++   .+.+||+|||+|+.+...
T Consensus       106 -----------------------y~~m---~LkGl~y~H--~~~IlHRDlKPnNLLis~---~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen  106 -----------------------YMLM---TLKGLAYCH--SKWILHRDLKPNNLLISS---DGQLKIADFGLARFFGSP  154 (318)
T ss_pred             -----------------------HHHH---HHHHHHHHH--hhhhhcccCCccceEEcC---CCcEEeecccchhccCCC
Confidence                                   2223   566788888  999999999999999954   456999999999976543


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ...        ...-+-|.||+|||++.+     ++.|+..+||||.|||+.||+-|.|-|.|+++.|+.-......+++
T Consensus       155 ~~~--------~~~~V~TRWYRAPELLfG-----sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP  221 (318)
T KOG0659|consen  155 NRI--------QTHQVVTRWYRAPELLFG-----SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTP  221 (318)
T ss_pred             Ccc--------cccceeeeeccChHHhcc-----chhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCC
Confidence            321        123388999999999975     4689999999999999999999999999988766432221111111


Q ss_pred             HHHHH---------HHHhcCCCCCC--CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        370 QEILF---------HSIQQGHYDFP--EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       370 ~~~~~---------~~i~~~~~~~p--~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .+..+         ..++.  +..|  ...++..|+++.||+.+||..||.+|+||.|+|+||||+...
T Consensus       222 ~~~~WP~~~~lpdY~~~~~--~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  222 TPDQWPEMTSLPDYVKIQQ--FPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             CcccCccccccccHHHHhc--CCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence            11111         11110  1111  113566789999999999999999999999999999998643

>KOG4717|consensus

Probab=100.00  E-value=5.5e-47  Score=379.90  Aligned_cols=265  Identities=32%  Similarity=0.533  Sum_probs=208.4

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      +..+.+.-+|.+ .+.||+|-|++|.+|++.-||+.||||+|+|...  ....++++|+..|+..+ |||||+||++...
T Consensus        11 i~DgkIAGLYDL-ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDT   88 (864)
T KOG4717|consen   11 IYDGKIAGLYDL-EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDT   88 (864)
T ss_pred             ccccceeeeehh-hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc-CcCeeeeeehhcc
Confidence            445667778887 6789999999999999999999999999987543  34568999999999875 9999999999877


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|                    +.|+|.|                  .++++|-...       .++.+..+
T Consensus        89 QTKly---Li--------------------LELGD~G------------------Dl~DyImKHe-------~Gl~E~La  120 (864)
T KOG4717|consen   89 QTKLY---LI--------------------LELGDGG------------------DLFDYIMKHE-------EGLNEDLA  120 (864)
T ss_pred             cceEE---EE--------------------EEecCCc------------------hHHHHHHhhh-------ccccHHHH
Confidence            65544   22                    2344432                  1111111000       00000001


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      .                                 .|++|   ++.|+.|+|  +-.||||||||||+.|..  ..|-|||
T Consensus       121 ~---------------------------------kYF~Q---I~~AI~YCH--qLHVVHRDLKPENVVFFE--KlGlVKL  160 (864)
T KOG4717|consen  121 K---------------------------------KYFAQ---IVHAISYCH--QLHVVHRDLKPENVVFFE--KLGLVKL  160 (864)
T ss_pred             H---------------------------------HHHHH---HHHHHHHHh--hhhhhcccCCcceeEEee--ecCceEe
Confidence            1                                 16677   888999999  999999999999999874  5677999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGE  356 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~~~  356 (539)
                      .||||+..+..+         ..+.|.||++.|-|||+|.+      ..|+ .++||||||||||.|+||++||...++.
T Consensus       161 TDFGFSNkf~PG---------~kL~TsCGSLAYSAPEILLG------DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS  225 (864)
T KOG4717|consen  161 TDFGFSNKFQPG---------KKLTTSCGSLAYSAPEILLG------DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS  225 (864)
T ss_pred             eeccccccCCCc---------chhhcccchhhccCchhhhc------CccCCcchhhhHHHHHHHHHHhCCCccccccch
Confidence            999998765443         35789999999999999984      5688 5899999999999999999999877543


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                     +.+..|...+|..|.    ++|.+++|||..||+.||++|.+.+++..|+|++..+.
T Consensus       226 ---------------ETLTmImDCKYtvPs----hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  226 ---------------ETLTMIMDCKYTVPS----HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             ---------------hhhhhhhcccccCch----hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence                           356788899999995    79999999999999999999999999999999987654

>KOG0595|consensus

Probab=100.00  E-value=1.3e-46  Score=370.79  Aligned_cols=260  Identities=28%  Similarity=0.463  Sum_probs=199.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..|.+. +.||+|+||+||+|+++.++..||||.|.+.  .....+.+..|+.+|+.+ +|||||.|+|+.++++..+  
T Consensus        10 ~~y~~~-~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~--   85 (429)
T KOG0595|consen   10 GDYELS-REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIY--   85 (429)
T ss_pred             ccceeh-hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEE--
Confidence            445553 4499999999999999999999999999765  333455678999999997 5999999999998877544  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccc-cccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI-VNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~-~~~~~~~~~~~~~~~  203 (539)
                       .|      +|.+-                 | |              .+..++.+.+ ..||- .+.            
T Consensus        86 -lV------MEyC~-----------------g-G--------------DLs~yi~~~~-~l~e~t~r~------------  113 (429)
T KOG0595|consen   86 -LV------MEYCN-----------------G-G--------------DLSDYIRRRG-RLPEATARH------------  113 (429)
T ss_pred             -EE------EEeCC-----------------C-C--------------CHHHHHHHcC-CCCHHHHHH------------
Confidence             23      23221                 1 0              1111111111 11221 111            


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC---CCceeccC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL---SPVKLCDF  280 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~---~~ikl~DF  280 (539)
                                                   +++|   ++.|+.++|  +++||||||||+|||+......   ..+||+||
T Consensus       114 -----------------------------Fm~Q---LA~alq~L~--~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF  159 (429)
T KOG0595|consen  114 -----------------------------FMQQ---LASALQFLH--ENNIIHRDLKPQNILLSTTARNDTSPVLKIADF  159 (429)
T ss_pred             -----------------------------HHHH---HHHHHHHHH--HCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence                                         4566   888899999  9999999999999999875333   56899999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |||+.+..+         ..+.|.||||.||||||+.      .+.||.++|+||+|+|+|+|++|++||...+      
T Consensus       160 GfAR~L~~~---------~~a~tlcGSplYMAPEV~~------~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t------  218 (429)
T KOG0595|consen  160 GFARFLQPG---------SMAETLCGSPLYMAPEVIM------SQQYDAKADLWSIGTILYQCLTGKPPFDAET------  218 (429)
T ss_pred             chhhhCCch---------hHHHHhhCCccccCHHHHH------hccccchhhHHHHHHHHHHHHhCCCCccccC------
Confidence            999976532         2467899999999999996      3579999999999999999999999998765      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                               ..+++..|..+....|... ..+++...+|+..+|..||..|.+..+-+.||++....
T Consensus       219 ---------~~eL~~~~~k~~~~~~~~~-~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  219 ---------PKELLLYIKKGNEIVPVLP-AELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             ---------HHHHHHHHhccccccCchh-hhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence                     3557778888876555432 35788888999999999999999999999999997644

>KOG0585|consensus

Probab=100.00  E-value=2.5e-45  Score=366.45  Aligned_cols=269  Identities=30%  Similarity=0.538  Sum_probs=196.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--------------CCHHHHHHHHHHHHhhcCCCCeeeee
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--------------HSRSRVFKEVETFHHCQGHPNIIQLL  112 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--------------~~~~~~~~Ei~~l~~~~~HpnIv~l~  112 (539)
                      ..|++ .+.||+|.||+|.+|++..+++.||||++.|...              ...+++.+||.+|++| +|||||+|+
T Consensus        97 Nqy~l-~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~Li  174 (576)
T KOG0585|consen   97 NQYEL-IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLI  174 (576)
T ss_pred             hheeh-hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEE
Confidence            34665 4569999999999999999999999999975321              1235789999999998 599999999


Q ss_pred             eeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccc
Q psy16343        113 EYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  192 (539)
Q Consensus       113 ~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~  192 (539)
                      |+..+.....              +-+          +.+|.- +                     |...|.+|.--. +
T Consensus       175 EvLDDP~s~~--------------~Yl----------Vley~s-~---------------------G~v~w~p~d~~e-l  207 (576)
T KOG0585|consen  175 EVLDDPESDK--------------LYL----------VLEYCS-K---------------------GEVKWCPPDKPE-L  207 (576)
T ss_pred             EeecCcccCc--------------eEE----------EEEecc-C---------------------CccccCCCCccc-c
Confidence            9998764321              111          111110 0                     111121111000 0


Q ss_pred             cCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC
Q psy16343        193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL  272 (539)
Q Consensus       193 ~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~  272 (539)
                      .+.++.                                 .|.+.   ++.++.|+|  .+|||||||||.|+|+.   ..
T Consensus       208 s~~~Ar---------------------------------~ylrD---vv~GLEYLH--~QgiiHRDIKPsNLLl~---~~  246 (576)
T KOG0585|consen  208 SEQQAR---------------------------------KYLRD---VVLGLEYLH--YQGIIHRDIKPSNLLLS---SD  246 (576)
T ss_pred             cHHHHH---------------------------------HHHHH---HHHHHHHHH--hcCeeccccchhheEEc---CC
Confidence            000011                                 15555   788899999  99999999999999995   44


Q ss_pred             CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  352 (539)
Q Consensus       273 ~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~  352 (539)
                      +.+||+|||.+.......   .......+...+|||.|||||.+..  +.....-+.+.||||+||+||.|+.|+.||.+
T Consensus       247 g~VKIsDFGVs~~~~~~~---~~~~d~~L~~tvGTPAF~APE~c~~--~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~  321 (576)
T KOG0585|consen  247 GTVKISDFGVSNEFPQGS---DEGSDDQLSRTVGTPAFFAPELCSG--GNSFSYSGFALDIWALGVTLYCLLFGQLPFFD  321 (576)
T ss_pred             CcEEeeccceeeecccCC---ccccHHHHhhcCCCccccchHhhcC--CCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence            779999999876442211   1111224555799999999999864  11112234789999999999999999999988


Q ss_pred             CCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      +.               ...++++|.+..+.||..  ..+.++++|||.+||++||.+|++..++..|||+....
T Consensus       322 ~~---------------~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  322 DF---------------ELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             ch---------------HHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence            64               345899999999999975  46899999999999999999999999999999998653

>KOG0600|consensus

Probab=100.00  E-value=5.9e-46  Score=373.90  Aligned_cols=281  Identities=25%  Similarity=0.336  Sum_probs=198.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc--c
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE--N  120 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~--~  120 (539)
                      ..+.|+. .+.||+|+||.||+|++..||+.||+|.|....  .....-..|||.||+++ +|||||+|.+...+..  .
T Consensus       115 ~~~~fek-i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~s  192 (560)
T KOG0600|consen  115 RADSFEK-IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGS  192 (560)
T ss_pred             chHHHHH-HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCce
Confidence            4556663 467999999999999999999999999986432  23344567999999997 6999999987654431  1


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .|               ||        .-..|.+|. ++.              .  .....|..|++            
T Consensus       193 iY---------------lV--------FeYMdhDL~-GLl--------------~--~p~vkft~~qI------------  220 (560)
T KOG0600|consen  193 IY---------------LV--------FEYMDHDLS-GLL--------------S--SPGVKFTEPQI------------  220 (560)
T ss_pred             EE---------------EE--------Eecccchhh-hhh--------------c--CCCcccChHHH------------
Confidence            11               11        112222222 100              0  00111222221            


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                               -|                     +++|   ++.++.|+|  .+||+|||||..|||+   ++.+.+||+||
T Consensus       221 ---------Kc---------------------~mkQ---Ll~Gl~~cH--~~gvlHRDIK~SNiLi---dn~G~LKiaDF  262 (560)
T KOG0600|consen  221 ---------KC---------------------YMKQ---LLEGLEYCH--SRGVLHRDIKGSNILI---DNNGVLKIADF  262 (560)
T ss_pred             ---------HH---------------------HHHH---HHHHHHHHh--hcCeeeccccccceEE---cCCCCEEeccc
Confidence                     12                     4445   556677777  9999999999999999   66678999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |||+.......       ..++..+-|+||+|||+|.+     ...|+.++|+||+||||.||+.|+|.|.|.++.+++-
T Consensus       263 GLAr~y~~~~~-------~~~T~rVvTLWYRpPELLLG-----~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~  330 (560)
T KOG0600|consen  263 GLARFYTPSGS-------APYTSRVVTLWYRPPELLLG-----ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLH  330 (560)
T ss_pred             cceeeccCCCC-------cccccceEEeeccChHHhcC-----CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHH
Confidence            99986544332       23566789999999999986     4679999999999999999999999999998776655


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCC--C--------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDF--P--------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~--p--------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                      .+...|+.+.+..+..+.-..+..  |        .+.+..++..+.+|+.+||..||.+|.||.++|+|+||.....+
T Consensus       331 kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~  409 (560)
T KOG0600|consen  331 KIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLP  409 (560)
T ss_pred             HHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCC
Confidence            555555555555544211110000  0        01245689999999999999999999999999999999654433

>KOG0661|consensus

Probab=100.00  E-value=1.1e-46  Score=376.57  Aligned_cols=279  Identities=26%  Similarity=0.345  Sum_probs=201.5

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      ..|.+.|.+. +.||.|+||.||+|+.+.+|..||||.+++.- .-....-+|||+.|+++..|||||+|+|++.+.+..
T Consensus         6 ~~~m~RY~~i-~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~   84 (538)
T KOG0661|consen    6 VIFMDRYTVI-RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI   84 (538)
T ss_pred             hhHHHHHHHH-HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence            3477888875 56899999999999999999999999996532 222233468999999986699999999999776532


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .+  .|      +|.+                                               .                
T Consensus        85 L~--fV------fE~M-----------------------------------------------d----------------   93 (538)
T KOG0661|consen   85 LY--FV------FEFM-----------------------------------------------D----------------   93 (538)
T ss_pred             Ee--ee------HHhh-----------------------------------------------h----------------
Confidence            11  11      1100                                               0                


Q ss_pred             cccchhhhhHHHHHHHhCC-CCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        202 KRCDLWSLGVVVYILLCGY-PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~-~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                               |=||+|+-++ .||...  ....|+.|   ++.+++++|  ++|+.||||||||||+..   ...|||+||
T Consensus        94 ---------~NLYqLmK~R~r~fse~--~irnim~Q---ilqGL~hiH--k~GfFHRDlKPENiLi~~---~~~iKiaDF  154 (538)
T KOG0661|consen   94 ---------CNLYQLMKDRNRLFSES--DIRNIMYQ---ILQGLAHIH--KHGFFHRDLKPENILISG---NDVIKIADF  154 (538)
T ss_pred             ---------hhHHHHHhhcCCcCCHH--HHHHHHHH---HHHHHHHHH--hcCcccccCChhheEecc---cceeEeccc
Confidence                     1133333332 222211  11115555   666677666  999999999999999953   345999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+|+.+....         ..+.++.|+||+|||+|.+     ...|+.++||||+|||++|+.+-+|.|.|.++.|+.|
T Consensus       155 GLARev~Skp---------PYTeYVSTRWYRAPEvLLr-----s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~  220 (538)
T KOG0661|consen  155 GLAREVRSKP---------PYTEYVSTRWYRAPEVLLR-----SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY  220 (538)
T ss_pred             ccccccccCC---------CcchhhhcccccchHHhhh-----ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH
Confidence            9999764322         3457899999999999985     3579999999999999999999999999999888766


Q ss_pred             ccCccchhhHHHH----HHHHhcCCCCCCCCC-------CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        361 QRGETCHACQEIL----FHSIQQGHYDFPEGE-------WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       361 ~~~~~~~~~~~~~----~~~i~~~~~~~p~~~-------~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .+-+..+++.+..    +.....-.+.||.-.       .+..+.++.+||.+||.+||++||||+|+|+||||...
T Consensus       221 KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  221 KICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             HHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence            5533333322211    112222345555421       24578999999999999999999999999999999753

>KOG0660|consensus

Probab=100.00  E-value=1.1e-45  Score=360.03  Aligned_cols=278  Identities=26%  Similarity=0.370  Sum_probs=198.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||+|..+.++.||+.||||.|.+.  .....++..||+.+|+++. |+|||.+++.+..+....        
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~~--------   97 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRDK--------   97 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc-CCCcceEEeecccccccc--------
Confidence            46799999999999999999999999998632  2234567899999999985 999999999886521100        


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         ...|-+.       ..+.+-++...                   +.+..-...+                    -+-
T Consensus        98 ---f~DvYiV-------~elMetDL~~i-------------------ik~~~~L~d~--------------------H~q  128 (359)
T KOG0660|consen   98 ---FNDVYLV-------FELMETDLHQI-------------------IKSQQDLTDD--------------------HAQ  128 (359)
T ss_pred             ---cceeEEe-------hhHHhhHHHHH-------------------HHcCccccHH--------------------HHH
Confidence               0000000       00011111110                   0000000000                    012


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .++|++|.                        ++.|+|  +.||+||||||.|||++.   +..+||||||+|+..... 
T Consensus       129 ~f~YQiLr------------------------gLKyiH--SAnViHRDLKPsNll~n~---~c~lKI~DFGLAR~~~~~-  178 (359)
T KOG0660|consen  129 YFLYQILR------------------------GLKYIH--SANVIHRDLKPSNLLLNA---DCDLKICDFGLARYLDKF-  178 (359)
T ss_pred             HHHHHHHH------------------------hcchhh--cccccccccchhheeecc---CCCEEeccccceeecccc-
Confidence            24556554                        466888  999999999999999954   455899999999976432 


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                           .....++.++.|.||+|||++..     ...|+.++||||+||||.|||+|++-|.|.+..++.....+.++++.
T Consensus       179 -----~~~~~mTeYVaTRWYRAPElll~-----~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~  248 (359)
T KOG0660|consen  179 -----FEDGFMTEYVATRWYRAPELLLN-----SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS  248 (359)
T ss_pred             -----CcccchhcceeeeeecCHHHHhc-----cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence                 11234678899999999999974     46799999999999999999999999999987776665555566666


Q ss_pred             HHHHHHHhcC--------CCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQG--------HYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~--------~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      +.....|.+.        .+..|..    .+++.+++|.||+.+||+.||.+|+||+|+|+|||+.....
T Consensus       249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence            6555555521        2233332    35678999999999999999999999999999999987544

>KOG0597|consensus

Probab=100.00  E-value=4.9e-46  Score=377.27  Aligned_cols=248  Identities=33%  Similarity=0.526  Sum_probs=194.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||+||||+.+.|.+.||+|.|+|...  .....+.+|+++++.+ +|||||.++++|+......        
T Consensus         7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~--------   77 (808)
T KOG0597|consen    7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLW--------   77 (808)
T ss_pred             HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEE--------
Confidence            4679999999999999999999999999987543  3455688999999997 5999999999999875443        


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                        .+.+|..+                .+++.+..-+-++.|.+..                   
T Consensus        78 ------------------vVte~a~g----------------~L~~il~~d~~lpEe~v~~-------------------  104 (808)
T KOG0597|consen   78 ------------------VVTEYAVG----------------DLFTILEQDGKLPEEQVRA-------------------  104 (808)
T ss_pred             ------------------EEehhhhh----------------hHHHHHHhccCCCHHHHHH-------------------
Confidence                              12334322                1222211111122222221                   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                            +..+   ++.|+.|+|  +++|+|||+||.|||+   +..+.+|+||||||+....++
T Consensus       105 ----------------------~a~~---LVsaL~yLh--s~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen  105 ----------------------IAYD---LVSALYYLH--SNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             ----------------------HHHH---HHHHHHHHH--hcCcccccCCcceeee---cCCCceeechhhhhhhcccCc
Confidence                                  1112   567788888  9999999999999999   566789999999999876654


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        .+...-|||.|||||++.      .+.|+..+|+||||||+|||..|+|||+...               .
T Consensus       155 ~--------vltsikGtPlYmAPElv~------e~pyd~~sDlWslGcilYE~~~G~PPF~a~s---------------i  205 (808)
T KOG0597|consen  155 S--------VLTSIKGTPLYMAPELVE------EQPYDHTSDLWSLGCILYELYVGQPPFYARS---------------I  205 (808)
T ss_pred             e--------eeeeccCcccccCHHHHc------CCCccchhhHHHHHHHHHHHhcCCCCchHHH---------------H
Confidence            4        345678999999999996      3689999999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      -.+...|...+..+|.    .+|..+++||+.+|.+||.+|+|..+++.|||..+
T Consensus       206 ~~Lv~~I~~d~v~~p~----~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  206 TQLVKSILKDPVKPPS----TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             HHHHHHHhcCCCCCcc----cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence            3466778887777775    68999999999999999999999999999999864

>KOG0581|consensus

Probab=100.00  E-value=7.1e-45  Score=355.72  Aligned_cols=256  Identities=28%  Similarity=0.397  Sum_probs=188.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc-ccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN-HERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~-~~~~~~IiHr  130 (539)
                      ...||+|..|+||||+|+.|++.+|+|.|... ....++++.+|+++++.+ +||+||++|+.|.+... ..    |+  
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~is----I~--  156 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEIS----IC--  156 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEE----ee--
Confidence            46799999999999999999999999999422 223467899999999999 69999999999876543 11    10  


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+              |-|.  . .            .+....|.    -||-.                   +|
T Consensus       157 ---mEYM--------------DgGS--L-d------------~~~k~~g~----i~E~~-------------------L~  181 (364)
T KOG0581|consen  157 ---MEYM--------------DGGS--L-D------------DILKRVGR----IPEPV-------------------LG  181 (364)
T ss_pred             ---hhhc--------------CCCC--H-H------------HHHhhcCC----CCHHH-------------------HH
Confidence               2221              1110  0 0            00000011    11211                   11


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      -                     +.++   ++.++.|+| ++.+||||||||+|||+++   .+.|||||||.++.+... 
T Consensus       182 ~---------------------ia~~---VL~GL~YLh-~~~~IIHRDIKPsNlLvNs---kGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  182 K---------------------IARA---VLRGLSYLH-EERKIIHRDIKPSNLLVNS---KGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             H---------------------HHHH---HHHHHHHHh-hccCeeeccCCHHHeeecc---CCCEEeccccccHHhhhh-
Confidence            1                     2222   566778888 1389999999999999954   466999999998765321 


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                               ...|++||-.|||||.+.+      ..|+.++||||||+.+.||+.|+.||.......          ...
T Consensus       233 ---------~a~tfvGT~~YMsPERi~g------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~----------~~~  287 (364)
T KOG0581|consen  233 ---------IANTFVGTSAYMSPERISG------ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY----------LDI  287 (364)
T ss_pred             ---------hcccccccccccChhhhcC------CcCCcccceecccHHHHHHhhCCCCCCCcCCCC----------CCH
Confidence                     3468999999999999974      579999999999999999999999998752111          124


Q ss_pred             HHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        371 EILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       371 ~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..++..|.. ..+.+|..   .+|+++++||..||++||.+|++++|+|+|||+....
T Consensus       288 ~~Ll~~Iv~~ppP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  288 FELLCAIVDEPPPRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHHHhcCCCCCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            457778876 45667764   4799999999999999999999999999999998653

>KOG0663|consensus

Probab=100.00  E-value=1e-45  Score=355.07  Aligned_cols=282  Identities=23%  Similarity=0.287  Sum_probs=188.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .|+. ...|++|+||+||+|+++.|++.||+|.++-..  ..---.-+|||.+|.++. |||||.+-++......     
T Consensus        77 efe~-lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~-H~NIV~vkEVVvG~~~-----  149 (419)
T KOG0663|consen   77 EFEK-LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR-HPNIVEVKEVVVGSNM-----  149 (419)
T ss_pred             HHHH-HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC-CCCeeeeEEEEecccc-----
Confidence            3443 356999999999999999999999999985321  111223579999999986 9999999987654432     


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                               ++|.++.       ..++-++...                ....+. .|..-                   
T Consensus       150 ---------d~iy~VM-------e~~EhDLksl----------------~d~m~q-~F~~~-------------------  177 (419)
T KOG0663|consen  150 ---------DKIYIVM-------EYVEHDLKSL----------------METMKQ-PFLPG-------------------  177 (419)
T ss_pred             ---------ceeeeeH-------HHHHhhHHHH----------------HHhccC-CCchH-------------------
Confidence                     1121100       0000011100                000000 00000                   


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                        ..-|++.+                        ++.++.|+|  .+.|+||||||+|+|+.+   .|.+||||||+|+.
T Consensus       178 --evK~L~~Q------------------------lL~glk~lH--~~wilHRDLK~SNLLm~~---~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  178 --EVKTLMLQ------------------------LLRGLKHLH--DNWILHRDLKTSNLLLSH---KGILKIADFGLARE  226 (419)
T ss_pred             --HHHHHHHH------------------------HHHHHHHHh--hceeEecccchhheeecc---CCcEEecccchhhh
Confidence              11233334                        445566777  999999999999999954   45699999999997


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +.....        .++..+-|+||+|||++.+     ...|++++||||+|||+.+||++.|.|.|+...++...+...
T Consensus       227 ygsp~k--------~~T~lVVTLWYRaPELLLG-----~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l  293 (419)
T KOG0663|consen  227 YGSPLK--------PYTPLVVTLWYRAPELLLG-----AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL  293 (419)
T ss_pred             hcCCcc--------cCcceEEEeeecCHHHhcC-----CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Confidence            654321        2445688999999999985     468999999999999999999999999999877654333222


Q ss_pred             chhhHHHHHHHHhcC----CCCCCCCC---------CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCCCCC
Q psy16343        366 CHACQEILFHSIQQG----HYDFPEGE---------WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP  432 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~----~~~~p~~~---------~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~~~~  432 (539)
                      .+++.+.++..+...    .+.|+...         +..+|+.+.||+.+||..||.+|+||+|+|+|+||.....+..|
T Consensus       294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P  373 (419)
T KOG0663|consen  294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDP  373 (419)
T ss_pred             hCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCCh
Confidence            223333222211110    12233211         22367999999999999999999999999999999876544333

>KOG4236|consensus

Probab=100.00  E-value=3.7e-46  Score=374.78  Aligned_cols=264  Identities=33%  Similarity=0.534  Sum_probs=211.2

Q ss_pred             cccchhccc-CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         44 CFQDLYRLK-GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        44 ~f~~~y~~~-~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .|..+|++. .++||+|.||+||-|+++.+|+.||||+|+|..  .....++..|+.||+.+ +||.||.|.-.|+..+.
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~er  637 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPER  637 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCce
Confidence            477778753 689999999999999999999999999998753  34457788999999996 69999999999988665


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..-.+.=+|+|+ .|-||-                                    ...|.    -||-+..         
T Consensus       638 vFVVMEKl~GDM-LEMILS------------------------------------sEkgR----L~er~Tk---------  667 (888)
T KOG4236|consen  638 VFVVMEKLHGDM-LEMILS------------------------------------SEKGR----LPERITK---------  667 (888)
T ss_pred             EEEEehhhcchH-HHHHHH------------------------------------hhccc----chHHHHH---------
Confidence            442222233332 121210                                    00010    1111110         


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                                                     +.+.|   +++|+.|+|  .+||+|.||||||+|+.+.+.-..+|||||
T Consensus       668 -------------------------------FlvtQ---IL~ALr~LH--~knIvHCDLKPENVLLas~~~FPQvKlCDF  711 (888)
T KOG4236|consen  668 -------------------------------FLVTQ---ILVALRYLH--FKNIVHCDLKPENVLLASASPFPQVKLCDF  711 (888)
T ss_pred             -------------------------------HHHHH---HHHHHHHhh--hcceeeccCCchheeeccCCCCCceeeccc
Confidence                                           13444   778888888  999999999999999998888888999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |||+.+....-         -.+.+|||.|.||||+.      .++|+.+.||||+|||+|.-|+|..||..+       
T Consensus       712 GfARiIgEksF---------RrsVVGTPAYLaPEVLr------nkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-------  769 (888)
T KOG4236|consen  712 GFARIIGEKSF---------RRSVVGTPAYLAPEVLR------NKGYNRSLDMWSVGVIIYVSLSGTFPFNED-------  769 (888)
T ss_pred             cceeecchhhh---------hhhhcCCccccCHHHHh------hccccccccceeeeEEEEEEecccccCCCc-------
Confidence            99997754321         23679999999999997      478999999999999999999999999764       


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                +.+-..|++..+-+|...|+.+|++|.|||.+||++.-.+|+++++.|.|||+++.
T Consensus       770 ----------EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  770 ----------EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             ----------cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence                      33678899999999999999999999999999999999999999999999999865

>KOG0594|consensus

Probab=100.00  E-value=3.6e-45  Score=357.53  Aligned_cols=279  Identities=25%  Similarity=0.368  Sum_probs=192.1

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCC-eeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPN-IIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~Hpn-Iv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      +.||+|+||+||+|+.+.+|+.||+|.+.-...  ..-....+|+.+|+.+ +|+| ||.|++++...+.+...      
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~~------   89 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRGI------   89 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeeccccccc------
Confidence            569999999999999999999999999963322  2334568999999997 5999 99999998776641100      


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                          .++.+       .....|+++...+.....             .+  ..+.++.++.                   
T Consensus        90 ----~~l~l-------vfe~~d~DL~~ymd~~~~-------------~~--~g~~~~~ik~-------------------  124 (323)
T KOG0594|consen   90 ----GKLYL-------VFEFLDRDLKKYMDSLPK-------------KP--QGLPPRLIKS-------------------  124 (323)
T ss_pred             ----ceEEE-------EEEeecccHHHHHHhccc-------------cc--cCCCHHHHHH-------------------
Confidence                00100       011222222211110000             00  1112222221                   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                            +++|   ++.++.|+|  ++||+||||||+|||+++   .+.+||+|||+|+......
T Consensus       125 ----------------------~m~Q---ll~gl~~~H--~~~IlHRDLKPQNlLi~~---~G~lKlaDFGlAra~~ip~  174 (323)
T KOG0594|consen  125 ----------------------FMRQ---LLRGLAFLH--SHGILHRDLKPQNLLISS---SGVLKLADFGLARAFSIPM  174 (323)
T ss_pred             ----------------------HHHH---HHHHHHHHH--hCCeecccCCcceEEECC---CCcEeeeccchHHHhcCCc
Confidence                                  5666   788899999  999999999999999954   5679999999999665433


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ...+-++|.||+|||++.+     ...|+..+||||+|||++||+++++.|.|.++.+++..+.+..+++.
T Consensus       175 ~--------~yt~evvTlWYRaPEvLlG-----s~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~  241 (323)
T KOG0594|consen  175 R--------TYTPEVVTLWYRAPEVLLG-----STSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN  241 (323)
T ss_pred             c--------cccccEEEeeccCHHHhcC-----CCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence            2        2346689999999999975     35699999999999999999999999999876654443333333333


Q ss_pred             HHHHHHHhc-CCCCCCCCCC----------CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        371 EILFHSIQQ-GHYDFPEGEW----------STISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       371 ~~~~~~i~~-~~~~~p~~~~----------~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      +..+..+.. ..|.++...|          +..++++.||+.+||+.||.+|+||+.+|.||||....
T Consensus       242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            222222211 1222222222          34557999999999999999999999999999998654

>KOG0580|consensus

Probab=100.00  E-value=1.1e-44  Score=333.84  Aligned_cols=253  Identities=32%  Similarity=0.539  Sum_probs=195.1

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+++ ++.||+|.||.||.|+.+.++-.||+|++.|..   .....++.+|+++-.++ .||||++++.||.+....+  
T Consensus        23 dfei-gr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riy--   98 (281)
T KOG0580|consen   23 DFEI-GRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIY--   98 (281)
T ss_pred             hccc-cccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeE--
Confidence            3444 889999999999999999999999999997643   23346788999999987 5999999999998876544  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|.      |                 +  +.                           -+|..+.+.+.....+++  
T Consensus        99 -Lil------E-----------------y--a~---------------------------~gel~k~L~~~~~~~f~e--  123 (281)
T KOG0580|consen   99 -LIL------E-----------------Y--AP---------------------------RGELYKDLQEGRMKRFDE--  123 (281)
T ss_pred             -EEE------E-----------------e--cC---------------------------CchHHHHHHhcccccccc--
Confidence             120      0                 0  00                           011111111000000000  


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                             .....+++|   ++.|+.|+|  .++||||||||||+|+..   .+.+||+|||.+.
T Consensus       124 -----------------------~~~a~Yi~q---~A~Al~y~h--~k~VIhRdiKpenlLlg~---~~~lkiAdfGwsV  172 (281)
T KOG0580|consen  124 -----------------------QRAATYIKQ---LANALLYCH--LKRVIHRDIKPENLLLGS---AGELKIADFGWSV  172 (281)
T ss_pred             -----------------------cchhHHHHH---HHHHHHHhc--cCCcccCCCCHHHhccCC---CCCeeccCCCcee
Confidence                                   011125666   888888988  999999999999999954   4558999999976


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .-..+          .-.|.|||..|.+||++.      ...||..+|+|++||+.|++|.|.+||...+          
T Consensus       173 ~~p~~----------kR~tlcgt~dyl~pEmv~------~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~----------  226 (281)
T KOG0580|consen  173 HAPSN----------KRKTLCGTLDYLPPEMVE------GRGHDKFVDLWSLGVLCYEFLVGLPPFESQS----------  226 (281)
T ss_pred             ecCCC----------CceeeecccccCCHhhcC------CCCccchhhHHHHHHHHHHHHhcCCchhhhh----------
Confidence            43211          235899999999999986      3689999999999999999999999998754          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                           ..+++++|..-.+.+|.    .+|.+|+|||.+||.++|.+|++..|++.|||+..
T Consensus       227 -----~~etYkrI~k~~~~~p~----~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  227 -----HSETYKRIRKVDLKFPS----TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             -----hHHHHHHHHHccccCCc----ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence                 35689999999999994    79999999999999999999999999999999964

>KOG0610|consensus

Probab=100.00  E-value=1.7e-43  Score=348.84  Aligned_cols=276  Identities=29%  Similarity=0.400  Sum_probs=202.9

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      +.||.|.-|+||+|..+.++..+|+|+|+|....   ...++..|-+||..+ +||.+.+||..|+.+...+   .    
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~c---l----  154 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSC---L----  154 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeE---E----
Confidence            5699999999999999999999999999875432   234566788889875 7999999999998876544   1    


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         +++|+.|..+  ..          +..  ..+.-+-||..                     
T Consensus       155 -------------------~meyCpGGdL--~~----------Lrq--kQp~~~fse~~---------------------  180 (459)
T KOG0610|consen  155 -------------------VMEYCPGGDL--HS----------LRQ--KQPGKRFSESA---------------------  180 (459)
T ss_pred             -------------------EEecCCCccH--HH----------HHh--hCCCCccchhh---------------------
Confidence                               2333322110  00          000  00000001100                     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                         ..++..+   ++.|+.|+|  -.|||.|||||||||+   .+.|+|-|.||+|+.......
T Consensus       181 -------------------aRFYaAE---vl~ALEYLH--mlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  181 -------------------ARFYAAE---VLLALEYLH--MLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             -------------------HHHHHHH---HHHHHHHHH--hhceeeccCCcceeEE---ecCCcEEeeeccccccCCCCC
Confidence                               1123334   778888999  8999999999999999   455779999999975331100


Q ss_pred             CC-----------------------------C-C------------------CCCCCCccccccCcccccchhhcccCCC
Q psy16343        291 SV-----------------------------H-S------------------PLATPLLLTPVGSAEFMAPEIVNAFMGP  322 (539)
Q Consensus       291 ~~-----------------------------~-~------------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~  322 (539)
                      +.                             . .                  ...+.....++||-.|+||||+.+    
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G----  309 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG----  309 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec----
Confidence            00                             0 0                  001123457899999999999974    


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHH
Q psy16343        323 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRR  402 (539)
Q Consensus       323 ~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~  402 (539)
                        .+++.+||||+|||.+||||.|.+||.|.+.               ++++.+|...++.||+.  ..+|..|+|||++
T Consensus       310 --~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~---------------~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~  370 (459)
T KOG0610|consen  310 --EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN---------------KETLRNIVGQPLKFPEE--PEVSSAAKDLIRK  370 (459)
T ss_pred             --CCCCchhhHHHHHHHHHHHHhCCCCcCCCCc---------------hhhHHHHhcCCCcCCCC--CcchhHHHHHHHH
Confidence              6899999999999999999999999999763               45788999999999986  3789999999999


Q ss_pred             hccccccCCCC----HHHHhcCCCccCCCCCCCCCCCCccccc
Q psy16343        403 LLVKDARKRLS----AASVLKHPWISTAGTAHRPLVTPQVIRR  441 (539)
Q Consensus       403 lL~~dP~~R~t----a~e~l~Hpw~~~~~~~~~~~~~~~~~~~  441 (539)
                      ||++||.+|+.    |.||.+||||.+..|+...-..|+.+++
T Consensus       371 LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~  413 (459)
T KOG0610|consen  371 LLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPK  413 (459)
T ss_pred             HhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCC
Confidence            99999999998    9999999999999997544445555443

>KOG0690|consensus

Probab=100.00  E-value=1.1e-43  Score=339.24  Aligned_cols=251  Identities=32%  Similarity=0.558  Sum_probs=193.2

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---HHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||+|.+|+.+.+++.||||+++|.-.-.   ....+.|-.+|+.+. ||.+..|...|+..+...   .|   
T Consensus       174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlC---FV---  246 (516)
T KOG0690|consen  174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLC---FV---  246 (516)
T ss_pred             HHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEE---EE---
Confidence            58999999999999999999999999997643222   234567888999885 999999988887765433   12   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|                 |--| +              +++.....        -..|.+..+.            
T Consensus       247 ---Me-----------------yanG-G--------------eLf~HLsr--------er~FsE~RtR------------  271 (516)
T KOG0690|consen  247 ---ME-----------------YANG-G--------------ELFFHLSR--------ERVFSEDRTR------------  271 (516)
T ss_pred             ---EE-----------------EccC-c--------------eEeeehhh--------hhcccchhhh------------
Confidence               11                 1101 0              11110000        0111221111            


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc-cccC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFN  289 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~-~~~~  289 (539)
                                  |+|         ..   +++|+.|+|  +++||.||||.||+|+   +..|+|||+||||++. +.+.
T Consensus       272 ------------FYG---------aE---IvsAL~YLH--s~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~~g  322 (516)
T KOG0690|consen  272 ------------FYG---------AE---IVSALGYLH--SRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIKYG  322 (516)
T ss_pred             ------------hhh---------HH---HHHHhhhhh--hCCeeeeechhhhhee---ccCCceEeeecccchhccccc
Confidence                        222         12   788999999  8999999999999999   5667899999999874 3332


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         ...|+||||.|.||||+.      ...|+.++|||.+||++|+|+||+.||+..+               
T Consensus       323 ~---------t~kTFCGTPEYLAPEVle------DnDYgraVDWWG~GVVMYEMmCGRLPFyn~d---------------  372 (516)
T KOG0690|consen  323 D---------TTKTFCGTPEYLAPEVLE------DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD---------------  372 (516)
T ss_pred             c---------eeccccCChhhcCchhhc------cccccceeehhhhhHHHHHHHhccCcccccc---------------
Confidence            2         356999999999999996      3569999999999999999999999999865               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGTA  429 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~~  429 (539)
                      .+.++.-|..+.+.||.    .+|++|+.|+..||.+||.+|+.     |.|+++|+||....|.
T Consensus       373 h~kLFeLIl~ed~kFPr----~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~  433 (516)
T KOG0690|consen  373 HEKLFELILMEDLKFPR----TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE  433 (516)
T ss_pred             hhHHHHHHHhhhccCCc----cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence            34588999999999996    69999999999999999999996     7899999999998874

>KOG0611|consensus

Probab=100.00  E-value=1e-43  Score=347.79  Aligned_cols=256  Identities=31%  Similarity=0.496  Sum_probs=200.9

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ...+..|++ .+.||+|+||.|.+|+....|+.||||.|+|....   ...++.+||+||..+ +|||||+++++|++.+
T Consensus        49 hnlkHRyE~-~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkd  126 (668)
T KOG0611|consen   49 HNLKHRYEI-TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKD  126 (668)
T ss_pred             cchhhHHHH-HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCc
Confidence            345667777 47799999999999999999999999999775433   334678999999986 6999999999998765


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ...                          -|..|..+ +              ++++++..        ...+.+.++..
T Consensus       127 KIv--------------------------ivMEYaS~-G--------------eLYDYiSe--------r~~LsErEaRh  157 (668)
T KOG0611|consen  127 KIV--------------------------IVMEYASG-G--------------ELYDYISE--------RGSLSEREARH  157 (668)
T ss_pred             eEE--------------------------EEEEecCC-c--------------cHHHHHHH--------hccccHHHHHH
Confidence            322                          12222111 1              23332221        11122222222


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                                                       ++||   +.+|+.|+|  +++|+|||||.||||+   |+++++||+|
T Consensus       158 ---------------------------------fFRQ---IvSAVhYCH--knrVvHRDLKLENILL---D~N~NiKIAD  196 (668)
T KOG0611|consen  158 ---------------------------------FFRQ---IVSAVHYCH--KNRVVHRDLKLENILL---DQNNNIKIAD  196 (668)
T ss_pred             ---------------------------------HHHH---HHHHHHHHh--hccceecccchhheee---cCCCCeeeec
Confidence                                             7788   999999999  9999999999999999   6667899999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+......         ..+.|+||+|.|.+||++++      ..|. ..+|.|||||+||.|+.|..||.|.+    
T Consensus       197 FGLSNly~~~---------kfLqTFCGSPLYASPEIvNG------~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D----  257 (668)
T KOG0611|consen  197 FGLSNLYADK---------KFLQTFCGSPLYASPEIVNG------TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD----  257 (668)
T ss_pred             cchhhhhccc---------cHHHHhcCCcccCCccccCC------CCCCCCccchhhHHHHHHHHhhcccccCCch----
Confidence            9998754322         25789999999999999984      4564 67999999999999999999999864    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                 ...+..+|.+|.|.-|+     -+.+|..||+.||.+||++|.|++++..|=|+..
T Consensus       258 -----------hk~lvrQIs~GaYrEP~-----~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  258 -----------HKRLVRQISRGAYREPE-----TPSDASGLIRWMLMVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             -----------HHHHHHHhhcccccCCC-----CCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence                       34578899999998775     3668999999999999999999999999999863

>KOG0578|consensus

Probab=100.00  E-value=1.2e-42  Score=355.58  Aligned_cols=251  Identities=29%  Similarity=0.416  Sum_probs=191.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK  133 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK  133 (539)
                      +.||+|+-|.||.|+...+++.||||.++......++-+++|+.+|+.. .|+|||++++.|--++...   -|      
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLW---VV------  348 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELW---VV------  348 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeE---EE------
Confidence            5699999999999999999999999999877666677899999999986 5999999998875543322   11      


Q ss_pred             CCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHH
Q psy16343        134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       134 ~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil  213 (539)
                      +|.+-              .|.                   ++.+-+...|.-                    =-.++|+
T Consensus       349 MEym~--------------ggs-------------------LTDvVt~~~~~E--------------------~qIA~Ic  375 (550)
T KOG0578|consen  349 MEYME--------------GGS-------------------LTDVVTKTRMTE--------------------GQIAAIC  375 (550)
T ss_pred             EeecC--------------CCc-------------------hhhhhhcccccH--------------------HHHHHHH
Confidence            22221              110                   011111000111                    1123333


Q ss_pred             HHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC
Q psy16343        214 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH  293 (539)
Q Consensus       214 ~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~  293 (539)
                      .+                        ++.|+.|+|  .+||+|||||-+|||+..   .+.+||+||||+..+.....  
T Consensus       376 re------------------------~l~aL~fLH--~~gIiHrDIKSDnILL~~---~g~vKltDFGFcaqi~~~~~--  424 (550)
T KOG0578|consen  376 RE------------------------ILQGLKFLH--ARGIIHRDIKSDNILLTM---DGSVKLTDFGFCAQISEEQS--  424 (550)
T ss_pred             HH------------------------HHHHHHHHH--hcceeeeccccceeEecc---CCcEEEeeeeeeeccccccC--
Confidence            33                        456677888  999999999999999954   45599999999987765432  


Q ss_pred             CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHH
Q psy16343        294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL  373 (539)
Q Consensus       294 ~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~  373 (539)
                            .-.|.+|||+||||||+.+      ..|+.++||||||+++.||+-|.|||..++.              ...+
T Consensus       425 ------KR~TmVGTPYWMAPEVvtr------k~YG~KVDIWSLGIMaIEMveGEPPYlnE~P--------------lrAl  478 (550)
T KOG0578|consen  425 ------KRSTMVGTPYWMAPEVVTR------KPYGPKVDIWSLGIMAIEMVEGEPPYLNENP--------------LRAL  478 (550)
T ss_pred             ------ccccccCCCCccchhhhhh------cccCccccchhhhhHHHHHhcCCCCccCCCh--------------HHHH
Confidence                  2348899999999999974      5799999999999999999999999986542              2345


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       374 ~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      +....+|.+.+..  +..+|++++||+.+||+.|+.+|++|.|+|+||||..+
T Consensus       479 yLIa~ng~P~lk~--~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  479 YLIATNGTPKLKN--PEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             HHHhhcCCCCcCC--ccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            5555677776654  35899999999999999999999999999999999644

>KOG0658|consensus

Probab=100.00  E-value=2.8e-42  Score=336.80  Aligned_cols=273  Identities=26%  Similarity=0.426  Sum_probs=186.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+++|.|+||.||+|....+++.||||.+-...    +--.+|+++|+.+ +|||||+|..+|.......   .+     
T Consensus        29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l-~HpNIV~L~~~f~~~~~~d---~~-----   95 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKL-DHPNIVRLLYFFSSSTESD---EV-----   95 (364)
T ss_pred             eEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhc-CCcCeeeEEEEEEecCCCc---hh-----
Confidence            578999999999999999999999999874211    1224799999965 7999999998875433221   01     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccc---cccccCCCCCCCCcccchhhh
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI---VNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~---~~~~~~~~~~~~~~~~Dvws~  209 (539)
                       -.|+++                                          +||+--+   ++.+     .....+.++-.+
T Consensus        96 -~lnlVl------------------------------------------eymP~tL~~~~r~~-----~~~~~~mp~~~i  127 (364)
T KOG0658|consen   96 -YLNLVL------------------------------------------EYMPETLYRVIRHY-----TRANQRMPLLEI  127 (364)
T ss_pred             -HHHHHH------------------------------------------HhchHHHHHHHHHH-----hhcCCCCceeee
Confidence             112111                                          1111000   0000     000111222222


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      -...|                     |   +..++.|+|  +.||+||||||+|||++.+  .+.+||||||-|+.+..+
T Consensus       128 KLYt~---------------------Q---lfrgl~yLh--~~~IcHRDIKPqNlLvD~~--tg~LKicDFGSAK~L~~~  179 (364)
T KOG0658|consen  128 KLYTY---------------------Q---LFRGLAYLH--SHGICHRDIKPQNLLVDPD--TGVLKICDFGSAKVLVKG  179 (364)
T ss_pred             HHHHH---------------------H---HHHHHHHHH--hcCcccCCCChheEEEcCC--CCeEEeccCCcceeeccC
Confidence            22233                     3   566788888  8999999999999999643  367999999999876544


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..         ..++.-|+.|+|||.+.+     +..|+.++||||+||+++||+-|++-|.|++..+++..+....+.+
T Consensus       180 ep---------niSYicSRyYRaPELifg-----a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P  245 (364)
T KOG0658|consen  180 EP---------NISYICSRYYRAPELIFG-----ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP  245 (364)
T ss_pred             CC---------ceeEEEeccccCHHHHcC-----ccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence            32         235677999999999975     5789999999999999999999999999998777654443333333


Q ss_pred             HHHHHHHHhc--CCCCCC---CCCC-----CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQ--GHYDFP---EGEW-----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~--~~~~~p---~~~~-----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ..+-...+..  ....+|   ...|     ..+++++.||+.++|+.+|.+|+++.|+|.||||.....
T Consensus       246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence            3222222111  122233   2223     457899999999999999999999999999999986543

>KOG0667|consensus

Probab=100.00  E-value=5.1e-42  Score=357.25  Aligned_cols=270  Identities=26%  Similarity=0.332  Sum_probs=185.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCC-----CCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH-----PNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~H-----pnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .++||+|+||.|.+|.+..|++.||||+|++... ...+...|+.+|.++..|     -|||+++|+|.....++   .|
T Consensus       191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc---iV  266 (586)
T KOG0667|consen  191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC---IV  266 (586)
T ss_pred             EEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee---ee
Confidence            4799999999999999999999999999975432 234567799999987633     48999999997765444   12


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-.         -|.||  -   +.+.             .-|    .+...++.                
T Consensus       267 ------fELL~~---------NLYel--l---K~n~-------------f~G----lsl~~ir~----------------  293 (586)
T KOG0667|consen  267 ------FELLST---------NLYEL--L---KNNK-------------FRG----LSLPLVRK----------------  293 (586)
T ss_pred             ------ehhhhh---------hHHHH--H---HhcC-------------CCC----CCHHHHHH----------------
Confidence                  221110         00000  0   0000             000    01111110                


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                               +.+|   ++.++.++|  +.||||.||||||||+.+.+. ..|||+|||.|+...
T Consensus       294 -------------------------~~~Q---il~~L~~L~--~l~IIHcDLKPENILL~~~~r-~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  294 -------------------------FAQQ---ILTALLFLH--ELGIIHCDLKPENILLKDPKR-SRIKVIDFGSSCFES  342 (586)
T ss_pred             -------------------------HHHH---HHHHHHHHH--hCCeeeccCChhheeeccCCc-CceeEEecccccccC
Confidence                                     2334   677788888  999999999999999987655 479999999987542


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .           ...+++-|+.|+|||||.+      -.|+.++||||||||++||.+|.|.|.|++..|+.-.+.+..+
T Consensus       343 q-----------~vytYiQSRfYRAPEVILG------lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG  405 (586)
T KOG0667|consen  343 Q-----------RVYTYIQSRFYRAPEVILG------LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLG  405 (586)
T ss_pred             C-----------cceeeeeccccccchhhcc------CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhC
Confidence            1           2458899999999999985      4799999999999999999999999999987775333322222


Q ss_pred             hhHHHHHHHHh-------------------------------------cCCCCCCC--CCCC-----CCCHHHHHHHHHh
Q psy16343        368 ACQEILFHSIQ-------------------------------------QGHYDFPE--GEWS-----TISDEAKDLIRRL  403 (539)
Q Consensus       368 ~~~~~~~~~i~-------------------------------------~~~~~~p~--~~~~-----~~s~~~~dli~~l  403 (539)
                      .+...++..-.                                     .+....|.  ..|.     .-...+.|||++|
T Consensus       406 ~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~  485 (586)
T KOG0667|consen  406 LPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRC  485 (586)
T ss_pred             CCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHH
Confidence            22222221111                                     11222221  0111     1124678999999


Q ss_pred             ccccccCCCCHHHHhcCCCccCCC
Q psy16343        404 LVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       404 L~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      |.+||.+|+|+.|+|+||||+...
T Consensus       486 L~~dP~~R~tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  486 LEWDPAERITPAQALNHPFLTGTS  509 (586)
T ss_pred             hccCchhcCCHHHHhcCccccccc
Confidence            999999999999999999998543

>KOG0612|consensus

Probab=100.00  E-value=3.1e-42  Score=373.46  Aligned_cols=287  Identities=28%  Similarity=0.450  Sum_probs=212.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.|..++++.|++.||+|+++|..+.   ...-|..|-.+|... +.+.||+|+..|+|+.+.| 
T Consensus        75 ~Dfei-lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LY-  151 (1317)
T KOG0612|consen   75 EDFEI-LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLY-  151 (1317)
T ss_pred             HhhHH-HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceE-
Confidence            44554 46899999999999999999999999999885332   233455666777664 6899999999999988777 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      ++.+.                 | |              .+.+...... .-||-...            
T Consensus       152 --lV------MdY~p-----------------G-G--------------DlltLlSk~~-~~pE~~Ar------------  178 (1317)
T KOG0612|consen  152 --LV------MDYMP-----------------G-G--------------DLLTLLSKFD-RLPEDWAR------------  178 (1317)
T ss_pred             --EE------Eeccc-----------------C-c--------------hHHHHHhhcC-CChHHHHH------------
Confidence              23      23222                 2 1              1112111211 12332211            


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                               +                   |...   ++.|+.-+|  +.|.|||||||+|||+   |..|+|||+|||-+
T Consensus       179 ---------F-------------------Y~aE---iVlAldslH--~mgyVHRDiKPDNvLl---d~~GHikLADFGsC  222 (1317)
T KOG0612|consen  179 ---------F-------------------YTAE---IVLALDSLH--SMGYVHRDIKPDNVLL---DKSGHIKLADFGSC  222 (1317)
T ss_pred             ---------H-------------------HHHH---HHHHHHHHH--hccceeccCCcceeEe---cccCcEeeccchhH
Confidence                     0                   2222   556666677  9999999999999999   67788999999976


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      -.+..+..+       ...+.+|||.|++||||... +.....|+..|||||+||++|+||+|.+||+.++.        
T Consensus       223 lkm~~dG~V-------~s~~aVGTPDYISPEvLqs~-~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl--------  286 (1317)
T KOG0612|consen  223 LKMDADGTV-------RSSVAVGTPDYISPEVLQSQ-GDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL--------  286 (1317)
T ss_pred             HhcCCCCcE-------EeccccCCCCccCHHHHHhh-cCCccccCCccchhhhHHHHHHHHcCCCcchHHHH--------
Confidence            655443332       34578999999999999853 33334699999999999999999999999998642        


Q ss_pred             ccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccCCCC---HHHHhcCCCccCCCCCCCCCCCCcc
Q psy16343        364 ETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS---AASVLKHPWISTAGTAHRPLVTPQV  438 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t---a~e~l~Hpw~~~~~~~~~~~~~~~~  438 (539)
                             ..++.+|.+-  .+.||..  ..+|.+++|||.++|+ +|+.|++   ++++..||||.+..|....-..|++
T Consensus       287 -------veTY~KIm~hk~~l~FP~~--~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~  356 (1317)
T KOG0612|consen  287 -------VETYGKIMNHKESLSFPDE--TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPV  356 (1317)
T ss_pred             -------HHHHHHHhchhhhcCCCcc--cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCC
Confidence                   3467778765  6888843  3599999999999987 6999998   9999999999999996555556667


Q ss_pred             ccccchhHHHhHH
Q psy16343        439 IRRNQSARELSSF  451 (539)
Q Consensus       439 ~~~~~~~~~~~~~  451 (539)
                      ++...+..+.++|
T Consensus       357 vPevssd~DTsnF  369 (1317)
T KOG0612|consen  357 VPEVSSDDDTSNF  369 (1317)
T ss_pred             CCcCCCCCccccc
Confidence            7777777777777

>KOG0201|consensus

Probab=100.00  E-value=2.9e-41  Score=335.35  Aligned_cols=246  Identities=28%  Similarity=0.364  Sum_probs=187.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc-----ccCC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE-----RHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~-----~~~~  126 (539)
                      .+.||+|+||.||+|.+..|++.||+|+|+... ......+.+|+.+|..|. ++||.++|..|-.+....     +..+
T Consensus        18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~LwiiMey~~gG   96 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWIIMEYCGGG   96 (467)
T ss_pred             chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHHHHHhcCc
Confidence            367999999999999999999999999997533 234567889999999974 899999998887766432     3334


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      .++..|++.+++-    .                                         .| +                 
T Consensus        97 sv~~lL~~~~~~~----E-----------------------------------------~~-i-----------------  113 (467)
T KOG0201|consen   97 SVLDLLKSGNILD----E-----------------------------------------FE-I-----------------  113 (467)
T ss_pred             chhhhhccCCCCc----c-----------------------------------------ce-e-----------------
Confidence            4444444444330    0                                         00 0                 


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                              ..+.++   ++.++.|+|  .++.+|||||+.|||+...   +.+||+|||++..+
T Consensus       114 ------------------------~~ilre---~l~~l~ylH--~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql  161 (467)
T KOG0201|consen  114 ------------------------AVILRE---VLKGLDYLH--SEKKIHRDIKAANILLSES---GDVKLADFGVAGQL  161 (467)
T ss_pred             ------------------------eeehHH---HHHHhhhhh--hcceecccccccceeEecc---CcEEEEecceeeee
Confidence                                    003344   677888999  8999999999999999643   66999999998765


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ...|++|||+||||||+++      ++|+.++||||||++.|+|+.|.|||....+....       
T Consensus       162 ~~~~~--------rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl-------  220 (467)
T KOG0201|consen  162 TNTVK--------RRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL-------  220 (467)
T ss_pred             echhh--------ccccccccccccchhhhcc------ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE-------
Confidence            43322        2268999999999999973      68999999999999999999999999876543221       


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                             +-...+.++.+.    ...|+.+++||..||.+||+.||+|.++|+|+|++..
T Consensus       221 -------flIpk~~PP~L~----~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  221 -------FLIPKSAPPRLD----GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             -------EeccCCCCCccc----cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence                   111122222222    2679999999999999999999999999999999863

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=8.9e-41  Score=341.49  Aligned_cols=251  Identities=28%  Similarity=0.446  Sum_probs=182.9

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|++..+|+.||||++++..   .....++.+|++++.++ +||||++++++|++....+   .|   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~---lv---   73 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLC---FV---   73 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEE---EE---
Confidence            36999999999999999999999999996532   12234577899999987 5999999999887765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+....-. +|.                   ...
T Consensus        74 ---~e~~~-----------------~-~--------------~L~~~l~~~~~~-~~~-------------------~~~   98 (323)
T cd05571          74 ---MEYAN-----------------G-G--------------ELFFHLSRERVF-SED-------------------RAR   98 (323)
T ss_pred             ---EeCCC-----------------C-C--------------cHHHHHHHcCCC-CHH-------------------HHH
Confidence               11110                 0 0              000000000000 000                   000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        99 ~---------------------~~~q---i~~~L~~lH--~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a~~~~~~~  149 (323)
T cd05571          99 F---------------------YGAE---IVSALGYLH--SCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             H---------------------HHHH---HHHHHHHHH--hCCeEeCCCCHHHEEEC---CCCCEEEeeCCCCcccccCC
Confidence            0                     2233   667788888  99999999999999994   44569999999987432111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++||||+||++|+|++|.+||.+.+               .
T Consensus       150 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~---------------~  200 (323)
T cd05571         150 --------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---------------H  200 (323)
T ss_pred             --------CcccceecCccccChhhhcC------CCCCccccCcccchhhhhhhcCCCCCCCCC---------------H
Confidence                    12346789999999999863      568999999999999999999999997653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      +.++..+..+.+.+|.    .+++++++||++||.+||++||     ++.++++||||....+
T Consensus       201 ~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~  259 (323)
T cd05571         201 EKLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINW  259 (323)
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            3466677777777774    5899999999999999999999     8999999999987544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.2e-40  Score=341.49  Aligned_cols=254  Identities=29%  Similarity=0.507  Sum_probs=186.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|++..+++.||||++.+..   ......+.+|++++..+ +||||+++++++.++...+ 
T Consensus        18 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~-   94 (329)
T PTZ00263         18 SDFEM-GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVY-   94 (329)
T ss_pred             hheEE-EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEE-
Confidence            44554 478999999999999999999999999996432   12345678899999997 5999999999987765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+.                 + +              .+...+......+.+..              
T Consensus        95 --lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~~~--------------  120 (329)
T PTZ00263         95 --FL------LEFVV-----------------G-G--------------ELFTHLRKAGRFPNDVA--------------  120 (329)
T ss_pred             --EE------EcCCC-----------------C-C--------------hHHHHHHHcCCCCHHHH--------------
Confidence              11      11110                 0 0              00000000000000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                               .                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       121 ---------~------------------~~~~q---i~~aL~~LH--~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~  165 (329)
T PTZ00263        121 ---------K------------------FYHAE---LVLAFEYLH--SKDIIYRDLKPENLLLD---NKGHVKVTDFGFA  165 (329)
T ss_pred             ---------H------------------HHHHH---HHHHHHHHH--HCCeeecCCCHHHEEEC---CCCCEEEeeccCc
Confidence                     0                  02233   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.....           ..+.+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+         
T Consensus       166 ~~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~---------  219 (329)
T PTZ00263        166 KKVPDR-----------TFTLCGTPEYLAPEVIQS------KGHGKAVDWWTMGVLLYEFIAGYPPFFDDT---------  219 (329)
T ss_pred             eEcCCC-----------cceecCChhhcCHHHHcC------CCCCCcceeechHHHHHHHHcCCCCCCCCC---------
Confidence            754221           235689999999999863      468899999999999999999999997653         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                            ...++..|..+.+.+|.    .++.++++||++||+.||.+|++     +++++.||||....+
T Consensus       220 ------~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~  279 (329)
T PTZ00263        220 ------PFRIYEKILAGRLKFPN----WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANW  279 (329)
T ss_pred             ------HHHHHHHHhcCCcCCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCH
Confidence                  23466778888877774    48999999999999999999997     799999999986543

>KOG0582|consensus

Probab=100.00  E-value=1e-40  Score=331.46  Aligned_cols=271  Identities=29%  Similarity=0.368  Sum_probs=195.9

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|++ .++||.|.-++||+|+.+.+++.||||+++-.. ......+.+|++.|+.+ +|||||+++..|..+...+-.
T Consensus        25 ~~~YeL-~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   25 AKDYEL-QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             ccceeE-EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEe
Confidence            455776 478999999999999999999999999996322 22356788999999987 699999999999776654411


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      +..                       ...|.                  +++.+.+  |+        +    .++++. 
T Consensus       103 mpf-----------------------Ma~GS------------------~ldIik~--~~--------~----~Gl~E~-  126 (516)
T KOG0582|consen  103 MPF-----------------------MAGGS------------------LLDIIKT--YY--------P----DGLEEA-  126 (516)
T ss_pred             ehh-----------------------hcCCc------------------HHHHHHH--Hc--------c----ccccHH-
Confidence            111                       00110                  0011100  00        0    000000 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                         +..+                     +.++   ++.++.|+|  ++|-||||||+.|||+   +..|.|||+|||++.
T Consensus       127 ---~Ia~---------------------iLre---~LkaL~YLH--~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa  174 (516)
T KOG0582|consen  127 ---SIAT---------------------ILRE---VLKALDYLH--QNGHIHRDVKAGNILI---DSDGTVKLADFGVSA  174 (516)
T ss_pred             ---HHHH---------------------HHHH---HHHHHHHHH--hcCceecccccccEEE---cCCCcEEEcCceeee
Confidence               1111                     2333   678899999  9999999999999999   556779999999876


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+.... .+.   ...+.+++|||+||||||+..    ...+|+.++||||+|++..||++|..||..-.          
T Consensus       175 ~l~~~G-~R~---~~rf~tfvgtp~wmAPEvl~q----~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p----------  236 (516)
T KOG0582|consen  175 SLFDSG-DRQ---VTRFNTFVGTPCWMAPEVLMQ----QLHGYDFKADIWSFGITACELAHGHAPFSKYP----------  236 (516)
T ss_pred             eecccC-cee---eEeeccccCcccccChHHhhh----cccCccchhhhhhhhHHHHHHhcCCCCcccCC----------
Confidence            543322 111   112368999999999999764    24789999999999999999999999997532          


Q ss_pred             cchhhHHHHHHHHhcCCC-----CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHY-----DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~-----~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                          +.+.++..+++..+     .++..+...++..++.+|..||++||.+||||+++|+|+||.....
T Consensus       237 ----PmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  237 ----PMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             ----hHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence                24556777776655     3444455678889999999999999999999999999999986543

>KOG0591|consensus

Probab=100.00  E-value=4.7e-42  Score=322.86  Aligned_cols=249  Identities=29%  Similarity=0.487  Sum_probs=177.0

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEecc--CCCCCHHHHHHHHHHHHhhcCCCCeeeeee-eeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHPNIIQLLE-YYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k--~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~-~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||++.+..+|..||.|.|+-  .....+.....|+.+|+++ +|||||++++ .|.+.....  
T Consensus        20 ~y~I-l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evl--   95 (375)
T KOG0591|consen   20 DYQI-LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVL--   95 (375)
T ss_pred             HHHH-HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhh--
Confidence            4555 4679999999999999999999999999862  2223456788999999997 5999999987 333322211  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEecc-ccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfg-l~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                 ||.+         .+||-| ++.-                              ++.+.. + ...-+-
T Consensus        96 -----------nivm---------E~c~~GDLsqm------------------------------Ik~~K~-q-kr~ipE  123 (375)
T KOG0591|consen   96 -----------NIVM---------ELCDAGDLSQM------------------------------IKHFKK-Q-KRLIPE  123 (375)
T ss_pred             -----------HHHH---------HhhcccCHHHH------------------------------HHHHHh-c-cccCch
Confidence                       2221         112111 0100                              111100 0 011111


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhh--hhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHS--IQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~--h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                      -.||-+                        ..|   ++.|+..+|.  ..+-|+||||||.||+++   ..|.+||.|||
T Consensus       124 ~~Vwk~------------------------f~Q---L~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---~~gvvKLGDfG  173 (375)
T KOG0591|consen  124 KTVWKY------------------------FVQ---LCRALYHCHSKIPRGTVMHRDIKPANIFLT---ANGVVKLGDFG  173 (375)
T ss_pred             HHHHHH------------------------HHH---HHHHHHHHhccccccceeeccCcchheEEc---CCCceeeccch
Confidence            234432                        223   4555555563  123399999999999994   55679999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      |++.+...+.        ...+++|||+||+||++.      ..+|+.++||||+||++|||..-++||+|++       
T Consensus       174 L~r~l~s~~t--------fA~S~VGTPyYMSPE~i~------~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-------  232 (375)
T KOG0591|consen  174 LGRFLSSKTT--------FAHSLVGTPYYMSPERIH------ESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-------  232 (375)
T ss_pred             hHhHhcchhH--------HHHhhcCCCcccCHHHHh------cCCCCcchhHHHHHHHHHHHHhcCCCccccc-------
Confidence            9987654432        345789999999999997      3689999999999999999999999999974       


Q ss_pred             cCccchhhHHHHHHHHhcCCCC-CCCCCCCCCCHHHHHHHHHhccccccCCCCH
Q psy16343        362 RGETCHACQEILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSA  414 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~-~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta  414 (539)
                              -..+..+|.+|++. .|.   ...|.++..||..|+.+||..||+.
T Consensus       233 --------~~~L~~KI~qgd~~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  233 --------LLSLCKKIEQGDYPPLPD---EHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             --------HHHHHHHHHcCCCCCCcH---HHhhhHHHHHHHHHccCCcccCCCc
Confidence                    23477899999775 443   3679999999999999999999984

>KOG0662|consensus

Probab=100.00  E-value=1e-41  Score=301.29  Aligned_cols=270  Identities=25%  Similarity=0.359  Sum_probs=186.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      -|.||+|+||+||+++++.|++.||+|.+.-.  ........++||.+|+.+ .|.|||+|+++...+..........|.
T Consensus         7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel-khknivrl~dvlhsdkkltlvfe~cdq   85 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_pred             HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeHHHhhH
Confidence            36799999999999999999999999988532  233345788999999987 599999999765444322211111122


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                      |||                       +.                ++  ...+++.||+.+.                   
T Consensus        86 dlk-----------------------ky----------------fd--slng~~d~~~~rs-------------------  105 (292)
T KOG0662|consen   86 DLK-----------------------KY----------------FD--SLNGDLDPEIVRS-------------------  105 (292)
T ss_pred             HHH-----------------------HH----------------HH--hcCCcCCHHHHHH-------------------
Confidence            221                       00                00  1235677777653                   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                       ++++                        ++.++.|+|  +++++||||||+|+|+   +.++.+|++|||+|+.+....
T Consensus       106 -fmlq------------------------llrgl~fch--shnvlhrdlkpqnlli---n~ngelkladfglarafgipv  155 (292)
T KOG0662|consen  106 -FMLQ------------------------LLRGLGFCH--SHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             -HHHH------------------------HHhhhhhhh--hhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce
Confidence             2333                        445567888  7799999999999999   556779999999999776543


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHH-hCCCCCCCCCCCCCCcccCccchhh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll-~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..        ....+-|.||++|.|+.+     +.-|+.+.|+||.|||+.|+. .|+|.|.|.+..|++..+....+.+
T Consensus       156 rc--------ysaevvtlwyrppdvlfg-----akly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p  222 (292)
T KOG0662|consen  156 RC--------YSAEVVTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP  222 (292)
T ss_pred             Ee--------eeceeeeeeccCcceeee-----eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCC
Confidence            21        224477999999999975     467999999999999999997 4899999987655432221111111


Q ss_pred             HHHHHHHHhcC-CC----CCCC-CCC----CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        370 QEILFHSIQQG-HY----DFPE-GEW----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       370 ~~~~~~~i~~~-~~----~~p~-~~~----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .+..+..+..- .|    .+|. ..|    +.++...+||++++|..+|.+|++|+.+|+||||...
T Consensus       223 ~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  223 TEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             ccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence            11111111110 11    1121 123    3456788999999999999999999999999999764

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5.9e-40  Score=335.03  Aligned_cols=252  Identities=26%  Similarity=0.447  Sum_probs=183.2

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|+++.+++.||||++.+..   ......+.+|+.++....+||||+++++++++....+   .|   
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~---iv---   74 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLF---FV---   74 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEE---EE---
Confidence            36999999999999999999999999996421   2234456788888887768999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+..                ....+. ..+    
T Consensus        75 ---~Ey~~-----------------~-g--------------~L~~~i~~----------------~~~l~~-~~~----   98 (320)
T cd05590          75 ---MEFVN-----------------G-G--------------DLMFHIQK----------------SRRFDE-ARA----   98 (320)
T ss_pred             ---EcCCC-----------------C-c--------------hHHHHHHH----------------cCCCCH-HHH----
Confidence               11110                 0 0              00000000                000000 000    


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        99 --------------------~~~~~q---l~~~L~~lH--~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~~~~~~~  150 (320)
T cd05590          99 --------------------RFYAAE---ITSALMFLH--DKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGIFNG  150 (320)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCeecCcCC
Confidence                                002333   667788888  99999999999999994   44569999999987432211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ...+.+||+.|+|||++..      ..|+.++||||+||++|+|++|++||.+.+               .
T Consensus       151 ~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~---------------~  201 (320)
T cd05590         151 K--------TTSTFCGTPDYIAPEILQE------MLYGPSVDWWAMGVLLYEMLCGHAPFEAEN---------------E  201 (320)
T ss_pred             C--------cccccccCccccCHHHHcC------CCCCCccchhhhHHHHHHHhhCCCCCCCCC---------------H
Confidence            1        2345689999999999863      468899999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH------HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta------~e~l~Hpw~~~~~~  428 (539)
                      ..++..|..+.+.+|.    .++.++++||++||++||.+|+++      +++++||||....+
T Consensus       202 ~~~~~~i~~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         202 DDLFEAILNDEVVYPT----WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             HHHHHHHhcCCCCCCC----CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence            3466777777777664    589999999999999999999998      89999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-40  Score=332.79  Aligned_cols=253  Identities=29%  Similarity=0.496  Sum_probs=183.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||+|.+..+++.||||++.....   .....+.+|++++..+ +||||+++++++.+....+  
T Consensus         2 ~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~--   77 (291)
T cd05612           2 DLER-IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLY--   77 (291)
T ss_pred             Ccee-eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEE--
Confidence            3454 4689999999999999999999999999964321   2234577899999987 5999999998887654332  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+.....+..+.                
T Consensus        78 -lv------~e~~~-----------------~-~--------------~L~~~~~~~~~~~~~~----------------  102 (291)
T cd05612          78 -ML------MEYVP-----------------G-G--------------ELFSYLRNSGRFSNST----------------  102 (291)
T ss_pred             -EE------EeCCC-----------------C-C--------------CHHHHHHHcCCCCHHH----------------
Confidence             11      11110                 0 0              0000000000000000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                       +      .                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       103 -~------~------------------~~~~q---i~~~l~~lH--~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~  149 (291)
T cd05612         103 -G------L------------------FYASE---IVCALEYLH--SKEIVYRDLKPENILLD---KEGHIKLTDFGFAK  149 (291)
T ss_pred             -H------H------------------HHHHH---HHHHHHHHH--HCCeeecCCCHHHeEEC---CCCCEEEEecCcch
Confidence             0      0                  02233   667788888  99999999999999994   44569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .....           ..+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+.+          
T Consensus       150 ~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~----------  202 (291)
T cd05612         150 KLRDR-----------TWTLCGTPEYLAPEVIQS------KGHNKAVDWWALGILIYEMLVGYPPFFDDN----------  202 (291)
T ss_pred             hccCC-----------cccccCChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----------
Confidence            54321           235689999999999863      468899999999999999999999998753          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                           ...++..+..+.+.+|.    .+++++++||++||+.||.+|++     ++++++||||....+
T Consensus       203 -----~~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  262 (291)
T cd05612         203 -----PFGIYEKILAGKLEFPR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW  262 (291)
T ss_pred             -----HHHHHHHHHhCCcCCCc----cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence                 23466778888887775    57999999999999999999995     999999999976543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=7.4e-40  Score=329.07  Aligned_cols=271  Identities=23%  Similarity=0.315  Sum_probs=175.5

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|++ .+.||+|+||.||+|.+..++..||+|+++... ......+.+|++++..+ +||||+++++++.+....+   .
T Consensus         6 ~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~---l   80 (288)
T cd07871           6 TYVK-LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLT---L   80 (288)
T ss_pred             cceE-eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEE---E
Confidence            3554 468999999999999999999999999986432 22334677899999987 5999999999987654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      .                 +|  ..+              .+...+......-++                   
T Consensus        81 v------~-----------------e~--~~~--------------~l~~~l~~~~~~~~~-------------------  102 (288)
T cd07871          81 V------F-----------------EY--LDS--------------DLKQYLDNCGNLMSM-------------------  102 (288)
T ss_pred             E------E-----------------eC--CCc--------------CHHHHHHhcCCCCCH-------------------
Confidence            1      1                 11  000              000000000000000                   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      -.+-                     .+.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       103 ~~~~---------------------~~~~q---i~~aL~~LH--~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~~  153 (288)
T cd07871         103 HNVK---------------------IFMFQ---LLRGLSYCH--KRKILHRDLKPQNLLIN---EKGELKLADFGLARAK  153 (288)
T ss_pred             HHHH---------------------HHHHH---HHHHHHHHH--hCCcccCCCCHHHEEEC---CCCCEEECcCcceeec
Confidence            0000                     03334   677888888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        .....+||+.|+|||++.+     ...|+.++||||+||++|+|++|++||.+.+..+.........
T Consensus       154 ~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  220 (288)
T cd07871         154 SVPTK--------TYSNEVVTLWYRPPDVLLG-----STEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLL  220 (288)
T ss_pred             cCCCc--------cccCceecccccChHHhcC-----CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            32211        1235678999999999863     2468899999999999999999999998764221000000000


Q ss_pred             hhhHHHHHHHHhc----CCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQ----GHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~----~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..+....+..+..    ..+.+|.       .....++++++|||++||+.||.+|+|++|+|+||||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         221 GTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            0000000111000    0111221       1123578999999999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=8.3e-40  Score=331.03  Aligned_cols=266  Identities=24%  Similarity=0.331  Sum_probs=176.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+++.+ +||||+++++++.+....+   
T Consensus         5 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~---   79 (303)
T cd07869           5 DSYEK-LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLT---   79 (303)
T ss_pred             ccceE-eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEE---
Confidence            45665 4789999999999999999999999999965432 2234577899999987 5999999999987765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-              -++...+                  ......+.++.+.               
T Consensus        80 lv------~e~~~--------------~~l~~~~------------------~~~~~~~~~~~~~---------------  106 (303)
T cd07869          80 LV------FEYVH--------------TDLCQYM------------------DKHPGGLHPENVK---------------  106 (303)
T ss_pred             EE------EECCC--------------cCHHHHH------------------HhCCCCCCHHHHH---------------
Confidence            11      11100              0000000                  0000001111110               


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                                .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       107 --------------------------~~~~q---i~~al~~lH--~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~  152 (303)
T cd07869         107 --------------------------LFLFQ---LLRGLSYIH--QRYILHRDLKPQNLLIS---DTGELKLADFGLARA  152 (303)
T ss_pred             --------------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCCEEECCCCccee
Confidence                                      03334   677888888  99999999999999994   445699999999864


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        ...+.+||+.|+|||++.+     ...|+.++||||+||++|+|++|.+||.+.....        
T Consensus       153 ~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--------  211 (303)
T cd07869         153 KSVPSH--------TYSNEVVTLWYRPPDVLLG-----STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ--------  211 (303)
T ss_pred             ccCCCc--------cCCCCcccCCCCChHHHcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH--------
Confidence            322111        1235689999999999863     2458889999999999999999999998643210        


Q ss_pred             chhhHHHHHHHHhcC-----------------CCC--CCC---CCCC--CCCHHHHHHHHHhccccccCCCCHHHHhcCC
Q psy16343        366 CHACQEILFHSIQQG-----------------HYD--FPE---GEWS--TISDEAKDLIRRLLVKDARKRLSAASVLKHP  421 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~-----------------~~~--~p~---~~~~--~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hp  421 (539)
                        ...+.+.......                 .+.  .+.   ..|.  ..+++++|||++||++||++|+|++|+|+||
T Consensus       212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~  289 (303)
T cd07869         212 --DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE  289 (303)
T ss_pred             --HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence              0000000000000                 000  000   0111  2467899999999999999999999999999


Q ss_pred             CccCCC
Q psy16343        422 WISTAG  427 (539)
Q Consensus       422 w~~~~~  427 (539)
                      ||....
T Consensus       290 ~f~~~~  295 (303)
T cd07869         290 YFSDLP  295 (303)
T ss_pred             ccccCC
Confidence            998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=6.8e-40  Score=340.44  Aligned_cols=265  Identities=27%  Similarity=0.442  Sum_probs=181.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|+.++..+ +||||+++++++++....+   
T Consensus         3 y~~-~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~---   77 (363)
T cd05628           3 FES-LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLY---   77 (363)
T ss_pred             ceE-eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEE---
Confidence            444 468999999999999999999999999996532   12234577899999886 6999999999998765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.....+..+..                
T Consensus        78 lv------~E~~~-----------------g-g--------------~L~~~l~~~~~l~~~~~----------------  103 (363)
T cd05628          78 LI------MEFLP-----------------G-G--------------DMMTLLMKKDTLTEEET----------------  103 (363)
T ss_pred             EE------EcCCC-----------------C-C--------------cHHHHHHhcCCCCHHHH----------------
Confidence            11      11110                 0 0              00000000000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                               ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       104 -------------------------~~~~~q---i~~aL~~lH--~~givHrDlKp~NILi~---~~~~vkL~DFGla~~  150 (363)
T cd05628         104 -------------------------QFYIAE---TVLAIDSIH--QLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTG  150 (363)
T ss_pred             -------------------------HHHHHH---HHHHHHHHH--hCCeEecCCCHHHeEEC---CCCCEEEeeccCccc
Confidence                                     013334   667788888  99999999999999994   446799999999875


Q ss_pred             cccCCCCC-------C--------------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhH
Q psy16343        286 IKFNTSVH-------S--------------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  338 (539)
Q Consensus       286 ~~~~~~~~-------~--------------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGv  338 (539)
                      +.......       .                    ........+.|||+.|+|||++.+      ..|+.++|||||||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DvwSlGv  224 (363)
T cd05628         151 LKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ------TGYNKLCDWWSLGV  224 (363)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC------CCCCCchhhhhhHH
Confidence            43211000       0                    000011245799999999999863      56899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccC---CCC
Q psy16343        339 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARK---RLS  413 (539)
Q Consensus       339 ily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~---R~t  413 (539)
                      ++|+|++|.+||.+.+               ....+..|...  .+.+|+  +..+|++++|||.+||. +|.+   |++
T Consensus       225 il~ell~G~~Pf~~~~---------------~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~~~~r~~r~~  286 (363)
T cd05628         225 IMYEMLIGYPPFCSET---------------PQETYKKVMNWKETLIFPP--EVPISEKAKDLILRFCC-EWEHRIGAPG  286 (363)
T ss_pred             HHHHHHhCCCCCCCCC---------------HHHHHHHHHcCcCcccCCC--cCCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence            9999999999998753               23355666653  344554  34689999999999886 5555   478


Q ss_pred             HHHHhcCCCccCCCCC
Q psy16343        414 AASVLKHPWISTAGTA  429 (539)
Q Consensus       414 a~e~l~Hpw~~~~~~~  429 (539)
                      ++|+++||||.+..+.
T Consensus       287 ~~ei~~hp~f~~~~~~  302 (363)
T cd05628         287 VEEIKTNPFFEGVDWE  302 (363)
T ss_pred             HHHHhCCCCCCCCCHH
Confidence            9999999999887653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0198|consensus

Probab=100.00  E-value=2.9e-40  Score=328.20  Aligned_cols=259  Identities=31%  Similarity=0.484  Sum_probs=177.8

Q ss_pred             cCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc-ccccCCeeee
Q psy16343         52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN-HERHKRIAHR  130 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~-~~~~~~IiHr  130 (539)
                      .++.||+|+||.||++.+..+|..+|||.+........+.+.+|+.+|.++. |||||+.++.....+. .+        
T Consensus        21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~--------   91 (313)
T KOG0198|consen   21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEY--------   91 (313)
T ss_pred             hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeee--------
Confidence            3788999999999999999999999999987543222456889999999986 9999999986443332 11        


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                           ||++.            |  +.+    .+..      .+...-|.   .-||-.-       .            
T Consensus        92 -----~i~mE------------y--~~~----GsL~------~~~~~~g~---~l~E~~v-------~------------  120 (313)
T KOG0198|consen   92 -----NIFME------------Y--APG----GSLS------DLIKRYGG---KLPEPLV-------R------------  120 (313)
T ss_pred             -----Eeeee------------c--cCC----CcHH------HHHHHcCC---CCCHHHH-------H------------
Confidence                 22210            0  000    0000      00000000   0111110       0            


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+.++   ++.++.|+|  ++|||||||||+|||+...  .+.+||+|||+++......
T Consensus       121 ---------------------~ytr~---iL~GL~ylH--s~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen  121 ---------------------RYTRQ---ILEGLAYLH--SKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--hCCEeccCcccceEEEeCC--CCeEEeccCcccccccccc
Confidence                                 03344   888899999  9999999999999999542  3569999999988654200


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC--cccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD--KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~--~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      .     .........|||.|||||++..       ++.  .++|||||||++.+|++|.+||.....             
T Consensus       173 ~-----~~~~~~~~~Gtp~~maPEvi~~-------g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~-------------  227 (313)
T KOG0198|consen  173 T-----KSDSELSVQGTPNYMAPEVIRN-------GEVARRESDIWSLGCTVVEMLTGKPPWSEFFE-------------  227 (313)
T ss_pred             c-----cccccccccCCccccCchhhcC-------CCcCCccchhhhcCCEEEeccCCCCcchhhcc-------------
Confidence            0     0011236789999999999962       333  489999999999999999999975200             


Q ss_pred             hHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        369 CQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       369 ~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..+.++...... .+.+|    ..+|++++|||.+||.+||.+||||+++|+|||+....
T Consensus       228 ~~~~~~~ig~~~~~P~ip----~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  228 EAEALLLIGREDSLPEIP----DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             hHHHHHHHhccCCCCCCC----cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            012233322222 23444    46999999999999999999999999999999997643

>KOG0614|consensus

Probab=100.00  E-value=4.4e-41  Score=337.42  Aligned_cols=280  Identities=30%  Similarity=0.506  Sum_probs=206.2

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      ++++-++  ..||-|+||.|-++........+|+|+|+|...   ...+.++.|-.+|..+. .|.||+||..|.+....
T Consensus       419 l~dl~~i--aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyv  495 (732)
T KOG0614|consen  419 LSDLKRI--ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYV  495 (732)
T ss_pred             hhhhhhh--hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhh
Confidence            4444443  369999999999887666555699999987542   34567889999999985 89999999999888766


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      |   ..      +|-+|                 | +              ++++.....        ..|.+..+.   
T Consensus       496 Y---mL------mEaCl-----------------G-G--------------ElWTiLrdR--------g~Fdd~tar---  523 (732)
T KOG0614|consen  496 Y---ML------MEACL-----------------G-G--------------ELWTILRDR--------GSFDDYTAR---  523 (732)
T ss_pred             h---hh------HHhhc-----------------C-c--------------hhhhhhhhc--------CCcccchhh---
Confidence            5   22      33333                 2 1              222221110        011111010   


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                           |         +   ..|++.|..|+|  ++|||.|||||||+|+   +..|.+||.|||
T Consensus       524 ---------------------F---------~---~acv~EAfeYLH--~k~iIYRDLKPENllL---d~~Gy~KLVDFG  565 (732)
T KOG0614|consen  524 ---------------------F---------Y---VACVLEAFEYLH--RKGIIYRDLKPENLLL---DNRGYLKLVDFG  565 (732)
T ss_pred             ---------------------h---------h---HHHHHHHHHHHH--hcCceeccCChhheee---ccCCceEEeehh
Confidence                                 0         1   124677888888  9999999999999999   566779999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ||+.+..+.         ...|+||||.|+|||++.      ..++|.++|+||||+++||||+|.|||.+.++      
T Consensus       566 FAKki~~g~---------KTwTFcGTpEYVAPEIIL------nKGHD~avDyWaLGIli~ELL~G~pPFs~~dp------  624 (732)
T KOG0614|consen  566 FAKKIGSGR---------KTWTFCGTPEYVAPEIIL------NKGHDRAVDYWALGILIYELLTGSPPFSGVDP------  624 (732)
T ss_pred             hHHHhccCC---------ceeeecCCcccccchhhh------ccCcchhhHHHHHHHHHHHHHcCCCCCCCCch------
Confidence            999876543         467999999999999997      36899999999999999999999999998753      


Q ss_pred             cCccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCCCCC--C
Q psy16343        362 RGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGTAHR--P  432 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~~~~--~  432 (539)
                               ..++..|..|  .+.||.    .++..|.+||++|...+|.+|+.     +.++.+|.||.+.+|...  .
T Consensus       625 ---------mktYn~ILkGid~i~~Pr----~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~  691 (732)
T KOG0614|consen  625 ---------MKTYNLILKGIDKIEFPR----RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR  691 (732)
T ss_pred             ---------HHHHHHHHhhhhhhhccc----ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence                     3467777776  467774    68999999999999999999996     889999999998888521  2


Q ss_pred             CCCCccccccchhHHHhHH
Q psy16343        433 LVTPQVIRRNQSARELSSF  451 (539)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~  451 (539)
                      ...|++++...+..+.++|
T Consensus       692 ~L~pPi~~~va~ptD~s~F  710 (732)
T KOG0614|consen  692 TLPPPIIPSVANPTDVSNF  710 (732)
T ss_pred             cCCCCccccCCCcccchhc
Confidence            2334455544444444443

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.2e-39  Score=333.82  Aligned_cols=251  Identities=27%  Similarity=0.467  Sum_probs=181.7

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..++..||||++.+..   ......+.+|++++..+ +||||+++++++++....+   .|   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~---lv---   73 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLC---FV---   73 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEE---EE---
Confidence            36999999999999999999999999996532   22345677899999886 6999999999887665433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+.....+..+                    ..-
T Consensus        74 ---~Ey~~-----------------~-g--------------~L~~~l~~~~~l~~~--------------------~~~   98 (328)
T cd05593          74 ---MEYVN-----------------G-G--------------ELFFHLSRERVFSED--------------------RTR   98 (328)
T ss_pred             ---EeCCC-----------------C-C--------------CHHHHHHhcCCCCHH--------------------HHH
Confidence               11110                 0 0              000000000000000                    000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        99 ~---------------------~~~q---i~~aL~~LH--~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~~  149 (328)
T cd05593          99 F---------------------YGAE---IVSALDYLH--SGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDA  149 (328)
T ss_pred             H---------------------HHHH---HHHHHHHHH--hCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCcc
Confidence            0                     2233   667788888  99999999999999994   44569999999987432111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+               .
T Consensus       150 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~Pf~~~~---------------~  200 (328)
T cd05593         150 --------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---------------H  200 (328)
T ss_pred             --------cccccccCCcCccChhhhcC------CCCCccCCccccchHHHHHhhCCCCCCCCC---------------H
Confidence                    12345789999999999863      468899999999999999999999997653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      ..+...+..+.+.+|.    .+++++++||++||.+||++|+     ++.|+++||||....+
T Consensus       201 ~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         201 EKLFELILMEDIKFPR----TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             HHHHHHhccCCccCCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            3355666677777774    5899999999999999999998     8999999999987544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.9e-40  Score=339.15  Aligned_cols=266  Identities=28%  Similarity=0.465  Sum_probs=181.9

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|++..+++.||||++.+..   ......+.+|++++..+ +||||++++++|+++...+   
T Consensus         3 y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~---   77 (364)
T cd05599           3 FES-IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLY---   77 (364)
T ss_pred             ceE-EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEE---
Confidence            444 478999999999999999999999999996532   12234567899999987 5999999999998765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+...... +|.                 
T Consensus        78 lv------~E~~~-----------------~-g--------------~L~~~l~~~~~l-~~~-----------------  101 (364)
T cd05599          78 LI------MEYLP-----------------G-G--------------DMMTLLMKKDTF-TEE-----------------  101 (364)
T ss_pred             EE------ECCCC-----------------C-c--------------HHHHHHHHcCCC-CHH-----------------
Confidence            11      11110                 0 0              000000000000 000                 


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                           .                  ...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       102 -----~------------------~~~~~~q---i~~aL~~lH--~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~  150 (364)
T cd05599         102 -----E------------------TRFYIAE---TILAIDSIH--KLGYIHRDIKPDNLLLD---AKGHIKLSDFGLCTG  150 (364)
T ss_pred             -----H------------------HHHHHHH---HHHHHHHHH--HCCeEeccCCHHHeEEC---CCCCEEEeeccccee
Confidence                 0                  0013344   677888888  99999999999999994   456799999999875


Q ss_pred             cccCCCCCC------------------C------------CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhh
Q psy16343        286 IKFNTSVHS------------------P------------LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  335 (539)
Q Consensus       286 ~~~~~~~~~------------------~------------~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWS  335 (539)
                      +........                  +            .......+.+||+.|+|||++..      .+|+.++||||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwS  224 (364)
T cd05599         151 LKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ------TGYNKECDWWS  224 (364)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC------CCCCCeeeeec
Confidence            432110000                  0            00001235689999999999863      57899999999


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC--
Q psy16343        336 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS--  413 (539)
Q Consensus       336 lGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t--  413 (539)
                      |||++|+|++|.+||.+.+.               ......+......++......+++++++||++||. ||.+|++  
T Consensus       225 lG~il~el~~G~~Pf~~~~~---------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~  288 (364)
T cd05599         225 LGVIMYEMLVGYPPFCSDNP---------------QETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNN  288 (364)
T ss_pred             chhHHHHhhcCCCCCCCCCH---------------HHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCC
Confidence            99999999999999986531               22344554443333222234689999999999997 9999998  


Q ss_pred             -HHHHhcCCCccCCCC
Q psy16343        414 -AASVLKHPWISTAGT  428 (539)
Q Consensus       414 -a~e~l~Hpw~~~~~~  428 (539)
                       ++|+|+||||....+
T Consensus       289 ~~~~ll~h~~~~~~~~  304 (364)
T cd05599         289 GVNEIKSHPFFKGVDW  304 (364)
T ss_pred             CHHHHhcCCCcCCCCH
Confidence             999999999987654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-39  Score=330.37  Aligned_cols=248  Identities=30%  Similarity=0.486  Sum_probs=179.9

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||.||+|.+..+++.||+|++.+..   ......+.+|++++.++ +||||++++++|.+....+   .|     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv-----   71 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLY---LV-----   71 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEE---EE-----
Confidence            699999999999999999999999996432   22334577899999986 6999999999887654333   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|.+-                 + +              .+...+..                ....    +...... 
T Consensus        72 -~e~~~-----------------~-g--------------~L~~~l~~----------------~~~~----~~~~~~~-   97 (312)
T cd05585          72 -LAFIN-----------------G-G--------------ELFHHLQR----------------EGRF----DLSRARF-   97 (312)
T ss_pred             -EcCCC-----------------C-C--------------cHHHHHHh----------------cCCC----CHHHHHH-
Confidence             11110                 0 0              00000000                0000    0000000 


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                          +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......  
T Consensus        98 --------------------~~~q---i~~~l~~lH--~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~--  147 (312)
T cd05585          98 --------------------YTAE---LLCALENLH--KFNVIYRDLKPENILLD---YQGHIALCDFGLCKLNMKDD--  147 (312)
T ss_pred             --------------------HHHH---HHHHHHHHH--hCCeEeCCCCHHHeEEC---CCCcEEEEECcccccCccCC--
Confidence                                2333   667788888  99999999999999994   44569999999987432111  


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                            ....+.+||+.|+|||++.+      ..|+.++|+||+||++|+|++|.+||.+.+               ...
T Consensus       148 ------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf~~~~---------------~~~  200 (312)
T cd05585         148 ------DKTNTFCGTPEYLAPELLLG------HGYTKAVDWWTLGVLLYEMLTGLPPFYDEN---------------VNE  200 (312)
T ss_pred             ------CccccccCCcccCCHHHHcC------CCCCCccceechhHHHHHHHhCCCCcCCCC---------------HHH
Confidence                  12245789999999999863      468999999999999999999999998653               234


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC---CHHHHhcCCCccCCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPWISTAG  427 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~---ta~e~l~Hpw~~~~~  427 (539)
                      ++..+..+.+.+|.    .+++++++||.+||..||.+|+   ++.|+|.||||....
T Consensus       201 ~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~  254 (312)
T cd05585         201 MYRKILQEPLRFPD----GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS  254 (312)
T ss_pred             HHHHHHcCCCCCCC----cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCC
Confidence            66777777777774    5899999999999999999997   589999999998653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2e-39  Score=331.56  Aligned_cols=251  Identities=28%  Similarity=0.444  Sum_probs=180.4

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+|..||+|++.+..   ......+.+|++++..+ +||||++++++|......+   .|   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~---lv---   73 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLC---FV---   73 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEE---EE---
Confidence            36999999999999999999999999996431   12234567899999887 5999999999887654332   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+...... +|.                .++   
T Consensus        74 ---~E~~~-----------------~-~--------------~L~~~l~~~~~~-~~~----------------~~~---   98 (323)
T cd05595          74 ---MEYAN-----------------G-G--------------ELFFHLSRERVF-TEE----------------RAR---   98 (323)
T ss_pred             ---EeCCC-----------------C-C--------------cHHHHHHHcCCC-CHH----------------HHH---
Confidence               11110                 0 0              000000000000 000                000   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......
T Consensus        99 ~---------------------~~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~  149 (323)
T cd05595          99 F---------------------YGAE---IVSALEYLH--SRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             H---------------------HHHH---HHHHHHHHH--HCCeEecCCCHHHEEEc---CCCCEEecccHHhccccCCC
Confidence            0                     2233   667777887  99999999999999994   44569999999986422111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|+|||||++|+|++|..||.+.+               .
T Consensus       150 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~g~~Pf~~~~---------------~  200 (323)
T cd05595         150 --------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---------------H  200 (323)
T ss_pred             --------CccccccCCcCcCCcccccC------CCCCchhchhhhHHHHHHHHhCCCCCCCCC---------------H
Confidence                    12235689999999999863      468899999999999999999999997653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      ..+...+....+.+|.    .+++++++||.+||.+||++|+     ++.++++||||....+
T Consensus       201 ~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         201 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             HHHHHHHhcCCCCCCC----CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            3455666667777774    5899999999999999999998     8999999999987554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.2e-39  Score=338.77  Aligned_cols=262  Identities=26%  Similarity=0.410  Sum_probs=177.3

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||+||+|++..+++.||||++.+...   .....+.+|++++..+ +|||||++++++.+....+   .|  
T Consensus         6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~---lv--   79 (381)
T cd05626           6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLY---FV--   79 (381)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEE---EE--
Confidence            4679999999999999999999999999965321   2234577899999986 6999999999998765433   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 + +              .+...+..... -||..                    
T Consensus        80 ----~E~~~-----------------g-g--------------~L~~~l~~~~~-~~e~~--------------------  102 (381)
T cd05626          80 ----MDYIP-----------------G-G--------------DMMSLLIRMEV-FPEVL--------------------  102 (381)
T ss_pred             ----EecCC-----------------C-C--------------cHHHHHHhcCC-CCHHH--------------------
Confidence                11110                 0 0              00000000000 01100                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                          ...+.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.+...
T Consensus       103 --------------------~~~~~~q---i~~aL~~LH--~~givHrDlKp~Nili~---~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626         103 --------------------ARFYIAE---LTLAIESVH--KMGFIHRDIKPDNILID---LDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             --------------------HHHHHHH---HHHHHHHHH--hCCeeecCCcHHHEEEC---CCCCEEEeeCcCCcccccc
Confidence                                0013334   667788888  99999999999999994   4467999999997643211


Q ss_pred             CCCCC---------------------------------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcc
Q psy16343        290 TSVHS---------------------------------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  330 (539)
Q Consensus       290 ~~~~~---------------------------------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~  330 (539)
                      .....                                       ........+.+||+.|+|||++.+      ..|+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~  228 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR------KGYTQL  228 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC------CCCCCc
Confidence            00000                                       000001235689999999999863      568999


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccc
Q psy16343        331 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDA  408 (539)
Q Consensus       331 ~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP  408 (539)
                      +|||||||++|+|++|.+||.+.+.               ......+...  .+.+|  .+..++++++|||.+||+.++
T Consensus       229 ~DiwSlG~il~elltG~~Pf~~~~~---------------~~~~~~i~~~~~~~~~~--~~~~~s~~~~dli~~ll~~~~  291 (381)
T cd05626         229 CDWWSVGVILFEMLVGQPPFLAPTP---------------TETQLKVINWENTLHIP--PQVKLSPEAVDLITKLCCSAE  291 (381)
T ss_pred             cceeehhhHHHHHHhCCCCCcCCCH---------------HHHHHHHHccccccCCC--CCCCCCHHHHHHHHHHccCcc
Confidence            9999999999999999999986532               1223334332  33343  345789999999999776554


Q ss_pred             c--CCCCHHHHhcCCCccCCCC
Q psy16343        409 R--KRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       409 ~--~R~ta~e~l~Hpw~~~~~~  428 (539)
                      +  .|++++|+++||||....+
T Consensus       292 ~~~~R~~~~~~l~hp~f~~~~~  313 (381)
T cd05626         292 ERLGRNGADDIKAHPFFSEVDF  313 (381)
T ss_pred             cccCCCCHHHHhcCcccCCCCh
Confidence            4  4999999999999987544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2e-39  Score=339.28  Aligned_cols=263  Identities=26%  Similarity=0.423  Sum_probs=179.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|++..+++.||||++.+...   .....+.+|++++..+ +|||||+++++|.++...+   .|  
T Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~---lv--   79 (382)
T cd05625           6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLY---FV--   79 (382)
T ss_pred             EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEE---EE--
Confidence            4689999999999999999999999999965321   2234677899999886 6999999999998765433   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 + +              .+...+........+.+                    
T Consensus        80 ----~E~~~-----------------g-g--------------~L~~~l~~~~~~~e~~~--------------------  103 (382)
T cd05625          80 ----MDYIP-----------------G-G--------------DMMSLLIRMGIFPEDLA--------------------  103 (382)
T ss_pred             ----EeCCC-----------------C-C--------------cHHHHHHhcCCCCHHHH--------------------
Confidence                11110                 0 0              00000000000000000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.+...
T Consensus       104 ---------------------~~~~~q---i~~al~~lH--~~~ivHrDlKp~NILl~---~~g~~kL~DFGla~~~~~~  154 (382)
T cd05625         104 ---------------------RFYIAE---LTCAVESVH--KMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWT  154 (382)
T ss_pred             ---------------------HHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCCEEEeECCCCcccccc
Confidence                                 003334   667788888  99999999999999994   4567999999997643210


Q ss_pred             CCCC---------------------------------------CCCCCCCccccccCcccccchhhcccCCCCCCCCCcc
Q psy16343        290 TSVH---------------------------------------SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  330 (539)
Q Consensus       290 ~~~~---------------------------------------~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~  330 (539)
                      ....                                       .........+.+||+.|+|||++.+      .+|+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~  228 (382)
T cd05625         155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR------TGYTQL  228 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC------CCCCCe
Confidence            0000                                       0000001235689999999999863      579999


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccC
Q psy16343        331 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK  410 (539)
Q Consensus       331 ~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~  410 (539)
                      +|||||||++|+|++|++||.+.+.               ......+......++.+.+..++++++|||.+|+ .||.+
T Consensus       229 ~DiwSlGvil~elltG~~Pf~~~~~---------------~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~  292 (382)
T cd05625         229 CDWWSVGVILYEMLVGQPPFLAQTP---------------LETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPED  292 (382)
T ss_pred             eeEEechHHHHHHHhCCCCCCCCCH---------------HHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhH
Confidence            9999999999999999999987532               2233344443333333334678999999999986 59999


Q ss_pred             CCC---HHHHhcCCCccCCCC
Q psy16343        411 RLS---AASVLKHPWISTAGT  428 (539)
Q Consensus       411 R~t---a~e~l~Hpw~~~~~~  428 (539)
                      |++   ++|+++||||....+
T Consensus       293 R~~~~~~~ei~~hp~f~~~~~  313 (382)
T cd05625         293 RLGKNGADEIKAHPFFKTIDF  313 (382)
T ss_pred             cCCCCCHHHHhcCCCcCCcCh
Confidence            997   999999999987554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0579|consensus

Probab=100.00  E-value=5.3e-41  Score=343.41  Aligned_cols=268  Identities=29%  Similarity=0.407  Sum_probs=191.2

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      -.|.+.+.|+ ||.|+||.||+|+++.++...|.|+|.-.......+++-||+||..|. ||+||+|++.|..+....  
T Consensus        30 P~d~WeIiGE-LGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLw--  105 (1187)
T KOG0579|consen   30 PRDHWEIIGE-LGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLW--  105 (1187)
T ss_pred             HHHHHHHHhh-hcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceE--
Confidence            3556667665 899999999999999999999999998766667788899999999995 999999997664333221  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                              -++.|+-| |..+.                     +--|+-..+.+.         
T Consensus       106 ------------------------iliEFC~G-GAVDa---------------------imlEL~r~LtE~---------  130 (1187)
T KOG0579|consen  106 ------------------------ILIEFCGG-GAVDA---------------------IMLELGRVLTED---------  130 (1187)
T ss_pred             ------------------------EEEeecCC-chHhH---------------------HHHHhccccchH---------
Confidence                                    13344322 11000                     000000000000         


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                         -+-||+|+                        .+.|+.|+|  +++|||||||..|||++-+   |.|+|+|||.+.
T Consensus       131 ---QIqvvc~q------------------------~ldALn~LH--s~~iIHRDLKAGNiL~Tld---GdirLADFGVSA  178 (1187)
T KOG0579|consen  131 ---QIQVVCYQ------------------------VLDALNWLH--SQNIIHRDLKAGNILLTLD---GDIRLADFGVSA  178 (1187)
T ss_pred             ---HHHHHHHH------------------------HHHHHHHHh--hcchhhhhccccceEEEec---CcEeeecccccc
Confidence               12234443                        457888999  9999999999999999654   559999999976


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ..-.+++|||+||||||+.+... ..++||.++||||||++|.+|.-+.||-..-++         
T Consensus       179 Kn~~t~--------qkRDsFIGTPYWMAPEVvmCET~-KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp---------  240 (1187)
T KOG0579|consen  179 KNKSTR--------QKRDSFIGTPYWMAPEVVMCETF-KDQPYDYKADIWSLGITLIEMAQIEPPHHELNP---------  240 (1187)
T ss_pred             cchhHH--------hhhccccCCcccccchheeeccc-cCCCchhhhhHHhhhhHHHHHhccCCCccccch---------
Confidence            432211        12347899999999999986432 346899999999999999999999999875432         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                           ...++....+.++.+-.+  +++|..++||+++||.+||..||+++|+|+||||.+...
T Consensus       241 -----MRVllKiaKSePPTLlqP--S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  241 -----MRVLLKIAKSEPPTLLQP--SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             -----HHHHHHHhhcCCCcccCc--chhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence                 233333333333333222  456889999999999999999999999999999986543

>KOG0986|consensus

Probab=100.00  E-value=3.3e-40  Score=327.80  Aligned_cols=256  Identities=28%  Similarity=0.415  Sum_probs=190.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee-e
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA-H  129 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii-H  129 (539)
                      ++||+|+||.||.|+.+.||+.||+|.++|...   ......+.|-++|.++ +.+.||.|-..|+..+......-|+ .
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClVLtlMNG  269 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLVLTLMNG  269 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEEEEeecC
Confidence            579999999999999999999999999875432   2234567899999987 4899999998898876544111111 0


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                      +|||              ..|..                         .|+++|--++.                     
T Consensus       270 GDLk--------------fHiyn-------------------------~g~~gF~e~ra---------------------  289 (591)
T KOG0986|consen  270 GDLK--------------FHIYN-------------------------HGNPGFDEQRA---------------------  289 (591)
T ss_pred             Ccee--------------EEeec-------------------------cCCCCCchHHH---------------------
Confidence            1111              11111                         22322222111                     


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                        ++                   +..+   +++++.  |+|+.+||.|||||||||+   |+.|+|+|+|.|||..+..+
T Consensus       290 --~F-------------------YAAE---i~cGLe--hlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  290 --RF-------------------YAAE---IICGLE--HLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             --HH-------------------HHHH---HHhhHH--HHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence              11                   2222   445444  5559999999999999999   67788999999999877544


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..         ....+||..||||||+..      ..|+.++|||||||++|+|+.|+.||......+           .
T Consensus       341 ~~---------~~~rvGT~GYMAPEvl~n------e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv-----------k  394 (591)
T KOG0986|consen  341 KP---------IRGRVGTVGYMAPEVLQN------EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV-----------K  394 (591)
T ss_pred             Cc---------cccccCcccccCHHHHcC------CcccCCccHHHHHhHHHHHHcccCchhhhhhhh-----------h
Confidence            32         335599999999999974      459999999999999999999999997643221           2


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGTA  429 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~~  429 (539)
                      .+++-+++...+..+|+    .+|+++++|.+.+|.+||.+|++     ++++.+||||.+.+|.
T Consensus       395 ~eEvdrr~~~~~~ey~~----kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~  455 (591)
T KOG0986|consen  395 REEVDRRTLEDPEEYSD----KFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR  455 (591)
T ss_pred             HHHHHHHHhcchhhccc----ccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence            35677788888877774    68999999999999999999995     7899999999988763

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=2.4e-39  Score=330.66  Aligned_cols=252  Identities=25%  Similarity=0.421  Sum_probs=182.9

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+++.||||++.+..   ......+..|++++..+.+||||++++++|++....+   .|   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~---lv---   74 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLF---FV---   74 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEE---EE---
Confidence            36999999999999999999999999996531   2223456778888887778999999999997765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+..                ....... .+    
T Consensus        75 ---~E~~~-----------------~-~--------------~L~~~l~~----------------~~~~~~~-~~----   98 (321)
T cd05591          75 ---MEYVN-----------------G-G--------------DLMFQIQR----------------SRKFDEP-RS----   98 (321)
T ss_pred             ---EeCCC-----------------C-C--------------cHHHHHHH----------------cCCCCHH-HH----
Confidence               11110                 0 0              00000000                0000000 00    


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......
T Consensus        99 --------------------~~~~~q---i~~aL~~LH--~~~ivHrDikp~Nill~---~~~~~kL~Dfg~~~~~~~~~  150 (321)
T cd05591          99 --------------------RFYAAE---VTLALMFLH--RHGVIYRDLKLDNILLD---AEGHCKLADFGMCKEGILNG  150 (321)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCeeccCCCHHHeEEC---CCCCEEEeecccceecccCC
Confidence                                002333   667788888  99999999999999994   44679999999987432211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++..      ..|+.++|||||||++|+|++|++||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~Pf~~~~---------------~  201 (321)
T cd05591         151 --------VTTTTFCGTPDYIAPEILQE------LEYGPSVDWWALGVLMYEMMAGQPPFEADN---------------E  201 (321)
T ss_pred             --------ccccccccCccccCHHHHcC------CCCCCccceechhHHHHHHhcCCCCCCCCC---------------H
Confidence                    12345789999999999863      468999999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-------CHHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-------SAASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-------ta~e~l~Hpw~~~~~~  428 (539)
                      ..++..|..+.+.+|.    .++.++++||.+||.+||++|+       +++++++||||....+
T Consensus       202 ~~~~~~i~~~~~~~p~----~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~  262 (321)
T cd05591         202 DDLFESILHDDVLYPV----WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW  262 (321)
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence            3466778777777764    4799999999999999999999       8999999999976544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=4.5e-39  Score=327.55  Aligned_cols=280  Identities=22%  Similarity=0.319  Sum_probs=170.8

Q ss_pred             cCceeceeCceEEEEEEEc--cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         52 KGEILGKGAYASVQTCVNI--LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+..||+|+||+||+|+++  .+++.||+|.+....  ....+.+|++++.++ +||||++++++|.......       
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-------   74 (317)
T cd07868           5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLREL-KHPNVISLQKVFLSHADRK-------   74 (317)
T ss_pred             cccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcE-------
Confidence            3678999999999999976  467889999986432  234577899999997 5999999999885432211       


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                             +.          -+.++.-. .               +...+....  ... ..      ...  ..   +..
T Consensus        75 -------~~----------lv~e~~~~-~---------------l~~~~~~~~--~~~-~~------~~~--~~---l~~  107 (317)
T cd07868          75 -------VW----------LLFDYAEH-D---------------LWHIIKFHR--ASK-AN------KKP--VQ---LPR  107 (317)
T ss_pred             -------EE----------EEEeccCC-C---------------HHHHHHhcc--ccc-cc------CCc--cc---CCH
Confidence                   00          01111000 0               000000000  000 00      000  00   000


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC-CCCCCceeccCCCcccccc
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP-DQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~-~~~~~ikl~DFGla~~~~~  288 (539)
                      ..+                  ..+.+|   ++.++.|+|  ++||+||||||+|||+... +..+.+||+|||+++....
T Consensus       108 ~~~------------------~~i~~q---i~~al~~LH--~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07868         108 GMV------------------KSLLYQ---ILDGIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             HHH------------------HHHHHH---HHHHHHHHH--hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence            000                  013444   677888888  9999999999999999543 2346799999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ...     ........+||+.|+|||++.+     ...|+.++||||+||++|+|++|.+||.+..........  ....
T Consensus       165 ~~~-----~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~--~~~~  232 (317)
T cd07868         165 PLK-----PLADLDPVVVTFWYRAPELLLG-----ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP--YHHD  232 (317)
T ss_pred             CCc-----cccccCCccccccccCCHHHcC-----CCCcCchhhHHHHHHHHHHHHhCCCCccCCccccccccc--ccHH
Confidence            211     0112345689999999999863     245889999999999999999999999865422100000  0000


Q ss_pred             hHHHHH-----------H-------------HHhcCCCC------CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        369 CQEILF-----------H-------------SIQQGHYD------FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       369 ~~~~~~-----------~-------------~i~~~~~~------~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                      ....++           .             ......+.      +.+......+.++.|||.+||+.||.+|+|++|+|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l  312 (317)
T cd07868         233 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM  312 (317)
T ss_pred             HHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHh
Confidence            000000           0             00000000      00001123467899999999999999999999999


Q ss_pred             cCCCc
Q psy16343        419 KHPWI  423 (539)
Q Consensus       419 ~Hpw~  423 (539)
                      +||||
T Consensus       313 ~hp~f  317 (317)
T cd07868         313 QDPYF  317 (317)
T ss_pred             cCCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.9e-39  Score=333.98  Aligned_cols=254  Identities=27%  Similarity=0.472  Sum_probs=184.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCC-cEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTE-LEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~-~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.|.+ .+.||+|+||.||+|.+..++ ..||+|++.+..   ......+.+|++++..+ +|||||++++++.++...+
T Consensus        30 ~~y~~-~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         30 EDFNF-IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             hhcEE-EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEE
Confidence            34554 468999999999999876655 689999986432   22345677899999987 5999999999997764333


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+.                 + +              .+...+..                ...+..
T Consensus       108 ---lv------~Ey~~-----------------~-g--------------~L~~~i~~----------------~~~~~~  130 (340)
T PTZ00426        108 ---LV------LEFVI-----------------G-G--------------EFFTFLRR----------------NKRFPN  130 (340)
T ss_pred             ---EE------EeCCC-----------------C-C--------------cHHHHHHH----------------cCCCCH
Confidence               11      11110                 0 0              00000000                000000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                           .                    ..+.+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       131 -----~--------------------~~~~~~~q---i~~aL~~LH--~~~ivHrDLkp~NILl~---~~~~ikL~DFG~  177 (340)
T PTZ00426        131 -----D--------------------VGCFYAAQ---IVLIFEYLQ--SLNIVYRDLKPENLLLD---KDGFIKMTDFGF  177 (340)
T ss_pred             -----H--------------------HHHHHHHH---HHHHHHHHH--HCCeEccCCCHHHEEEC---CCCCEEEecCCC
Confidence                 0                    00013344   667788888  99999999999999994   456799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++....           ...+.+||+.|||||++.+      ..|+.++||||+||++|+|++|.+||.+.+        
T Consensus       178 a~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--------  232 (340)
T PTZ00426        178 AKVVDT-----------RTYTLCGTPEYIAPEILLN------VGHGKAADWWTLGIFIYEILVGCPPFYANE--------  232 (340)
T ss_pred             CeecCC-----------CcceecCChhhcCHHHHhC------CCCCccccccchhhHHHHHhcCCCCCCCCC--------
Confidence            875421           1235789999999999863      468899999999999999999999998653        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                             ...++..+..+...+|.    .+++++++||++||..||.+|+     +++++++||||.+..+
T Consensus       233 -------~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~  292 (340)
T PTZ00426        233 -------PLLIYQKILEGIIYFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW  292 (340)
T ss_pred             -------HHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence                   23466778888777774    5799999999999999999996     8999999999987654

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.8e-39  Score=328.46  Aligned_cols=251  Identities=25%  Similarity=0.412  Sum_probs=180.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.++.+|..||||++++..   .........|+.++....+||||+++++++++....+   .|   
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~---lv---   74 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLF---FV---   74 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEE---EE---
Confidence            36999999999999999999999999996531   1233456678888877668999999999997765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+...... ++.                      
T Consensus        75 ---~E~~~-----------------~-g--------------~L~~~i~~~~~~-~~~----------------------   96 (316)
T cd05620          75 ---MEFLN-----------------G-G--------------DLMFHIQDKGRF-DLY----------------------   96 (316)
T ss_pred             ---ECCCC-----------------C-C--------------cHHHHHHHcCCC-CHH----------------------
Confidence               11110                 0 0              000000000000 000                      


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                        ....+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        97 ------------------~~~~~~~q---i~~~l~~lH--~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05620          97 ------------------RATFYAAE---IVCGLQFLH--SKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGD  150 (316)
T ss_pred             ------------------HHHHHHHH---HHHHHHHHH--HCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccCC
Confidence                              00012334   677788888  99999999999999994   44569999999986432211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++||||+||++|+|++|..||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~Pf~~~~---------------~  201 (316)
T cd05620         151 --------NRASTFCGTPDYIAPEILQG------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDD---------------E  201 (316)
T ss_pred             --------CceeccCCCcCccCHHHHcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCC---------------H
Confidence                    12346789999999999863      468899999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-HHHhcCCCccCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-ASVLKHPWISTAG  427 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-~e~l~Hpw~~~~~  427 (539)
                      ..++..+..+.+.+|.    .++.++++||++||..||++|+++ +++++||||....
T Consensus       202 ~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         202 DELFESIRVDTPHYPR----WITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             HHHHHHHHhCCCCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence            3456667766666664    489999999999999999999997 5899999998654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-39  Score=338.02  Aligned_cols=264  Identities=28%  Similarity=0.461  Sum_probs=178.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |.+ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|++++.++ +|||||+++++|++....+   
T Consensus         3 y~~-~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~---   77 (377)
T cd05629           3 FHT-VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLY---   77 (377)
T ss_pred             ceE-eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeE---
Confidence            444 478999999999999999999999999986422   12234577899999886 6999999999998765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.....+..+..                
T Consensus        78 lv------~E~~~-----------------g-g--------------~L~~~l~~~~~~~~~~~----------------  103 (377)
T cd05629          78 LI------MEFLP-----------------G-G--------------DLMTMLIKYDTFSEDVT----------------  103 (377)
T ss_pred             EE------EeCCC-----------------C-C--------------cHHHHHHhcCCCCHHHH----------------
Confidence            11      12110                 0 0              00000000000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                               ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       104 -------------------------~~~~~q---l~~aL~~LH--~~givHrDlkp~NIll~---~~~~~kl~DfGla~~  150 (377)
T cd05629         104 -------------------------RFYMAE---CVLAIEAVH--KLGFIHRDIKPDNILID---RGGHIKLSDFGLSTG  150 (377)
T ss_pred             -------------------------HHHHHH---HHHHHHHHH--hCCeeccCCCHHHEEEC---CCCCEEEeecccccc
Confidence                                     003334   667788888  99999999999999994   446799999999863


Q ss_pred             cccCCC------------CCCCC---------------------------CCCCccccccCcccccchhhcccCCCCCCC
Q psy16343        286 IKFNTS------------VHSPL---------------------------ATPLLLTPVGSAEFMAPEIVNAFMGPEASG  326 (539)
Q Consensus       286 ~~~~~~------------~~~~~---------------------------~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~  326 (539)
                      ......            .....                           ......+.+||+.|+|||++.+      ..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~  224 (377)
T cd05629         151 FHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ------QG  224 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc------CC
Confidence            211000            00000                           0000113589999999999863      56


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhc
Q psy16343        327 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLL  404 (539)
Q Consensus       327 y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL  404 (539)
                      |+.++|||||||++|+|++|.+||.+.+.               ...+..|...  .+.+|.  +..++.+++|||.+||
T Consensus       225 ~~~~~DiwSlGvil~elltG~~Pf~~~~~---------------~~~~~~i~~~~~~~~~p~--~~~~s~~~~dli~~lL  287 (377)
T cd05629         225 YGQECDWWSLGAIMFECLIGWPPFCSENS---------------HETYRKIINWRETLYFPD--DIHLSVEAEDLIRRLI  287 (377)
T ss_pred             CCCceeeEecchhhhhhhcCCCCCCCCCH---------------HHHHHHHHccCCccCCCC--CCCCCHHHHHHHHHHh
Confidence            89999999999999999999999976532               2344555443  334443  3468999999999999


Q ss_pred             cccccCCC---CHHHHhcCCCccCCCC
Q psy16343        405 VKDARKRL---SAASVLKHPWISTAGT  428 (539)
Q Consensus       405 ~~dP~~R~---ta~e~l~Hpw~~~~~~  428 (539)
                      . +|.+|+   ++.|+++||||....+
T Consensus       288 ~-~~~~r~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         288 T-NAENRLGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             c-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence            8 777764   9999999999987554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0586|consensus

Probab=100.00  E-value=9.7e-40  Score=336.99  Aligned_cols=252  Identities=33%  Similarity=0.517  Sum_probs=194.7

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |.+ ...||+|.|++|.++++..|+..||||+|+|....  .+..+.+|+++|..+ +|||||+|+.+++.....+   .
T Consensus        58 y~i-~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~ly---l  132 (596)
T KOG0586|consen   58 YVI-IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLY---L  132 (596)
T ss_pred             eee-eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeE---E
Confidence            444 46799999999999999999999999999875432  345689999999986 6999999999998765544   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       ..|..+ +              +++..+..        .....+            
T Consensus       133 V-----------------------~eya~~-g--------------e~~~yl~~--------~gr~~e------------  154 (596)
T KOG0586|consen  133 V-----------------------MEYASG-G--------------ELFDYLVK--------HGRMKE------------  154 (596)
T ss_pred             E-----------------------EEeccC-c--------------hhHHHHHh--------cccchh------------
Confidence            1                       122111 1              11111100        000000            


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                           ..+..+++|   +..++.|+|  +++|||||||.||||+   +...++||+||||+..+
T Consensus       155 ---------------------~~ar~~F~q---~vsaveYcH--~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~  205 (596)
T KOG0586|consen  155 ---------------------KEARAKFRQ---IVSAVEYCH--SKNIVHRDLKAENILL---DENMNIKIADFGFSTFF  205 (596)
T ss_pred             ---------------------hhhhhhhHH---HHHHHHHHh--hcceeccccchhhccc---ccccceeeeccccceee
Confidence                                 011115566   889999999  9999999999999999   45556999999999876


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ..+.         .+.|+||+|.|.|||++.+      ..|+ ..+|+||+||++|.|++|..||.|.+..         
T Consensus       206 ~~~~---------~lqt~cgsppyAaPEl~~g------~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---------  261 (596)
T KOG0586|consen  206 DYGL---------MLQTFCGSPPYAAPELFNG------KKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---------  261 (596)
T ss_pred             cccc---------cccccCCCCCccChHhhcC------cccCCcceehhhhhhhheeeeecccccCCcccc---------
Confidence            5432         5679999999999999974      3465 6899999999999999999999987532         


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            .+.++...++|.+|.    .+|.++++||+++|.++|.+|++.+++++|.|+...
T Consensus       262 ------~Lr~rvl~gk~rIp~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  262 ------ELRPRVLRGKYRIPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             ------cccchheeeeecccc----eeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence                  255677788888886    589999999999999999999999999999998643

>KOG0696|consensus

Probab=100.00  E-value=1.1e-39  Score=320.04  Aligned_cols=253  Identities=28%  Similarity=0.451  Sum_probs=189.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+||+|+||.|.++..+.|.+.||||+++|.-.-   ..+-.+.|-++|.....-|.+++|+..|+.-+..+   .|   
T Consensus       355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy---FV---  428 (683)
T KOG0696|consen  355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY---FV---  428 (683)
T ss_pred             EEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee---eE---
Confidence            5899999999999999999999999999764221   11222456666665556789999999998876655   23   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 +..              .++. +..        +..+.++.+             
T Consensus       429 ---MEyvn-----------------GGD--------------LMyh-iQQ--------~GkFKEp~A-------------  452 (683)
T KOG0696|consen  429 ---MEYVN-----------------GGD--------------LMYH-IQQ--------VGKFKEPVA-------------  452 (683)
T ss_pred             ---EEEec-----------------Cch--------------hhhH-HHH--------hcccCCchh-------------
Confidence               33322                 100              0000 000        111111111             


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          .++..+   ++.++-++|  ++|||.||||.+|+|+   +..++|||+|||+++.--...
T Consensus       453 --------------------vFYAaE---iaigLFFLh--~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~  504 (683)
T KOG0696|consen  453 --------------------VFYAAE---IAIGLFFLH--SKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDG  504 (683)
T ss_pred             --------------------hhhhHH---HHHHhhhhh--cCCeeeeeccccceEe---ccCCceEeeecccccccccCC
Confidence                                112222   555566666  9999999999999999   556789999999987533222


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....|+||||.|+|||++.      .++|+.++||||+||+|||||.|++||.|++               .
T Consensus       505 --------~TTkTFCGTPdYiAPEIi~------YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD---------------E  555 (683)
T KOG0696|consen  505 --------VTTKTFCGTPDYIAPEIIA------YQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---------------E  555 (683)
T ss_pred             --------cceeeecCCCcccccceEE------ecccccchhHHHHHHHHHHHHcCCCCCCCCC---------------H
Confidence                    1346899999999999996      5789999999999999999999999999975               3


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-----HHHhcCCCccCCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTAGTA  429 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-----~e~l~Hpw~~~~~~~  429 (539)
                      +++++.|...+..+|.    ++|.||.++++.+|.+.|.+|+.+     .++..||||+..+|.
T Consensus       556 ~elF~aI~ehnvsyPK----slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWe  615 (683)
T KOG0696|consen  556 DELFQAIMEHNVSYPK----SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWE  615 (683)
T ss_pred             HHHHHHHHHccCcCcc----cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHH
Confidence            5699999999999985    799999999999999999999975     589999999988874

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-39  Score=330.27  Aligned_cols=256  Identities=28%  Similarity=0.420  Sum_probs=180.5

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|++..+++.||||++++..   ......+.+|++++..+ +||||++++++++++...+   
T Consensus         3 y~~-~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~---   77 (333)
T cd05600           3 FQI-LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLY---   77 (333)
T ss_pred             cEE-EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEE---
Confidence            444 468999999999999999999999999996532   12345677899999987 4999999999987765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.....+..+..                
T Consensus        78 lv------~e~~~-----------------g-~--------------~L~~~l~~~~~l~~~~~----------------  103 (333)
T cd05600          78 LA------MEYVP-----------------G-G--------------DFRTLLNNLGVLSEDHA----------------  103 (333)
T ss_pred             EE------EeCCC-----------------C-C--------------CHHHHHHHcCCCCHHHH----------------
Confidence            11      11110                 0 0              00000000000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                               ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       104 -------------------------~~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a~~  150 (333)
T cd05600         104 -------------------------RFYMAE---MFEAVDALH--ELGYIHRDLKPENFLID---ASGHIKLTDFGLSKG  150 (333)
T ss_pred             -------------------------HHHHHH---HHHHHHHHH--HCCccccCCCHHHEEEC---CCCCEEEEeCcCCcc
Confidence                                     003334   667888888  99999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ...           ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+.          
T Consensus       151 ~~~-----------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~----------  203 (333)
T cd05600         151 IVT-----------YANSVVGSPDYMAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP----------  203 (333)
T ss_pred             ccc-----------ccCCcccCccccChhHhcC------CCCCCccceecchHHHhhhhhCCCCCCCCCH----------
Confidence            422           1235689999999999863      4789999999999999999999999987542          


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCC----CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEW----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                           ...+..+......+....+    ..+++++++||.+||..+|.+|++++++++||||....+
T Consensus       204 -----~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         204 -----NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             -----HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence                 2234444432221111111    257999999999999999999999999999999987544

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3.3e-39  Score=330.11  Aligned_cols=251  Identities=27%  Similarity=0.440  Sum_probs=180.7

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..++..||+|++.+..   ......+.+|++++..+ +||||+++++++.+....+   .|   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~---lv---   73 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLC---FV---   73 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEE---EE---
Confidence            36999999999999999999999999996532   12234567888888876 6999999999887665433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+.....+..+                 .++   
T Consensus        74 ---~E~~~-----------------~-~--------------~L~~~l~~~~~l~~~-----------------~~~---   98 (325)
T cd05594          74 ---MEYAN-----------------G-G--------------ELFFHLSRERVFSED-----------------RAR---   98 (325)
T ss_pred             ---EeCCC-----------------C-C--------------cHHHHHHhcCCCCHH-----------------HHH---
Confidence               11110                 0 0              000000000000000                 000   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           .+..|   ++.++.|+|  + +||+||||||+|||+.   ..+.+||+|||+++.....
T Consensus        99 ---------------------~~~~q---i~~aL~~lH--~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~~~~~~~~  149 (325)
T cd05594          99 ---------------------FYGAE---IVSALDYLH--SEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKD  149 (325)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--hcCCEEecCCCCCeEEEC---CCCCEEEecCCCCeecCCC
Confidence                                 02233   667788888  7 7999999999999994   4456999999998643211


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .        ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+.+               
T Consensus       150 ~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tG~~Pf~~~~---------------  200 (325)
T cd05594         150 G--------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---------------  200 (325)
T ss_pred             C--------cccccccCCcccCCHHHHcc------CCCCCccccccccceeeeeccCCCCCCCCC---------------
Confidence            1        12235689999999999863      468899999999999999999999997653               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      .+.++..+..+.+.+|.    .+++++++||.+||.+||++|+     ++.++++||||....+
T Consensus       201 ~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  260 (325)
T cd05594         201 HEKLFELILMEEIRFPR----TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW  260 (325)
T ss_pred             HHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence            23456677777777775    5899999999999999999997     8999999999987544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=9.5e-39  Score=327.39  Aligned_cols=261  Identities=25%  Similarity=0.364  Sum_probs=183.0

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+++.||||++++...   .....+.+|+.++..+.+||||++++++|++....+   .|   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~---lv---   74 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLF---FV---   74 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEE---EE---
Confidence            369999999999999999999999999975321   223456789999988878999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+.....+ ||..                   . 
T Consensus        75 ---~e~~~-----------------~-g--------------~L~~~~~~~~~l-~~~~-------------------~-   98 (329)
T cd05588          75 ---IEFVS-----------------G-G--------------DLMFHMQRQRKL-PEEH-------------------A-   98 (329)
T ss_pred             ---EeCCC-----------------C-C--------------CHHHHHHHcCCC-CHHH-------------------H-
Confidence               11110                 0 0              000000000000 0000                   0 


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        99 --------------------~~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~~~~~~~~  150 (329)
T cd05588          99 --------------------RFYSAE---ISLALNFLH--ERGIIYRDLKLDNVLLD---AEGHIKLTDYGMCKEGIRPG  150 (329)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCeEecCCCHHHeEEC---CCCCEEECcCccccccccCC
Confidence                                002334   667788888  99999999999999994   44569999999986421111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|+||+||++|+|++|++||......+...      ....
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~------~~~~  210 (329)
T cd05588         151 --------DTTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD------QNTE  210 (329)
T ss_pred             --------CccccccCCccccCHHHHcC------CCCCCccceechHHHHHHHHHCCCCccccccccccc------ccch
Confidence                    12346789999999999863      468899999999999999999999996432111000      0112


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC------HHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS------AASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t------a~e~l~Hpw~~~~~~  428 (539)
                      +.+.+.+....+.+|.    .++.++++||++||++||.+|++      ++++++||||....+
T Consensus       211 ~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~  270 (329)
T cd05588         211 DYLFQVILEKQIRIPR----SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW  270 (329)
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            3456667777777774    58999999999999999999997      789999999976544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.7e-39  Score=325.83  Aligned_cols=252  Identities=28%  Similarity=0.427  Sum_probs=179.3

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+++.||||++++..   .........|..++....+||||++++++++.+...+   .|   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~---lv---   74 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLF---FV---   74 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEE---EE---
Confidence            36999999999999999999999999996421   1223445667777776668999999999987665433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+...... +|                ..++   
T Consensus        75 ---~e~~~-----------------g-g--------------~L~~~~~~~~~~-~~----------------~~~~---   99 (316)
T cd05592          75 ---MEYLN-----------------G-G--------------DLMFHIQSSGRF-DE----------------ARAR---   99 (316)
T ss_pred             ---EcCCC-----------------C-C--------------cHHHHHHHcCCC-CH----------------HHHH---
Confidence               11110                 0 0              000000000000 00                0000   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus       100 ---------------------~~~~q---i~~al~~LH--~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~~~~~~~  150 (316)
T cd05592         100 ---------------------FYAAE---IICGLQFLH--KKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNGE  150 (316)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--HCCEEeCCCCHHHeEEC---CCCCEEEccCcCCeECCCCC
Confidence                                 02333   667788888  99999999999999994   44569999999987532211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ......+||+.|+|||++.+      ..|+.++|+||+||++|+|++|..||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~G~~Pf~~~~---------------~  201 (316)
T cd05592         151 --------GKASTFCGTPDYIAPEILKG------QKYNESVDWWSFGVLLYEMLIGQSPFHGED---------------E  201 (316)
T ss_pred             --------CccccccCCccccCHHHHcC------CCCCCcccchhHHHHHHHHHhCCCCCCCCC---------------H
Confidence                    12235689999999999863      468899999999999999999999998753               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-~e~l~Hpw~~~~~~  428 (539)
                      ..++..+....+.+|.    .++.++.+||.+||..||++|+++ +++++||||....+
T Consensus       202 ~~~~~~i~~~~~~~~~----~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         202 DELFDSILNDRPHFPR----WISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence            3355666666666663    589999999999999999999986 58999999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1e-38  Score=327.37  Aligned_cols=262  Identities=28%  Similarity=0.421  Sum_probs=181.9

Q ss_pred             hcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      |++ .+.||+|+||.||+|++.   .++..||+|++.+..    ......+.+|++++.++.+||||++++++++.....
T Consensus         2 y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           2 FEL-LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             ceE-EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            444 468999999999998864   578999999996421    122345778999999987899999999988765433


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|      +|.+-                 + +              .+...+.....+..+.+            
T Consensus        81 ~---lv------~e~~~-----------------~-g--------------~L~~~l~~~~~~~~~~~------------  107 (332)
T cd05614          81 H---LI------LDYVS-----------------G-G--------------EMFTHLYQRDNFSEDEV------------  107 (332)
T ss_pred             E---EE------EeCCC-----------------C-C--------------cHHHHHHHcCCCCHHHH------------
Confidence            2   11      11110                 0 0              00000000000000000            


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                           +                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       108 -----~------------------------~~~~q---i~~~l~~lH--~~~ivHrDlkp~Nili~---~~~~~kl~DfG  150 (332)
T cd05614         108 -----R------------------------FYSGE---IILALEHLH--KLGIVYRDIKLENILLD---SEGHVVLTDFG  150 (332)
T ss_pred             -----H------------------------HHHHH---HHHHHHHHH--HCCcEecCCCHHHeEEC---CCCCEEEeeCc
Confidence                 0                        02334   667788888  99999999999999995   34569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++.......       ......+||+.|+|||++.+     ...|+.++|||||||++|+|++|..||.......    
T Consensus       151 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----  214 (332)
T cd05614         151 LSKEFLSEEK-------ERTYSFCGTIEYMAPEIIRG-----KGGHGKAVDWWSLGILIFELLTGASPFTLEGERN----  214 (332)
T ss_pred             CCccccccCC-------CccccccCCccccCHHHhcC-----CCCCCCccccccchhhhhhhhcCCCCCCCCCCCC----
Confidence            9875432211       12235689999999999863     2357889999999999999999999997543211    


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                             ....+...+....+.+|.    .+++++++||.+||..||++|+     +++++++||||....+
T Consensus       215 -------~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         215 -------TQSEVSRRILKCDPPFPS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             -------CHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence                   123344556555555553    5899999999999999999999     7889999999986543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.3e-38  Score=331.38  Aligned_cols=264  Identities=25%  Similarity=0.417  Sum_probs=182.5

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.|++ .+.||+|+||.||+|.+..+++.||+|++.+...   .....+.+|+.++..+ +||||++++++++++...+
T Consensus        42 ~~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          42 AEDYDV-VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             HHHCeE-EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEE
Confidence            345665 4689999999999999999999999999965221   1233466788888875 6999999999998765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+-                 + +              .+...+...  .-||..             
T Consensus       120 ---lv------~Ey~~-----------------g-g--------------~L~~~l~~~--~~~~~~-------------  143 (370)
T cd05621         120 ---MV------MEYMP-----------------G-G--------------DLVNLMSNY--DVPEKW-------------  143 (370)
T ss_pred             ---EE------EcCCC-----------------C-C--------------cHHHHHHhc--CCCHHH-------------
Confidence               11      11110                 0 0              000000000  000000             


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                 ...+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       144 ---------------------------~~~~~~q---il~aL~~LH--~~~IvHrDLKp~NILl~---~~~~~kL~DFG~  188 (370)
T cd05621         144 ---------------------------AKFYTAE---VVLALDAIH--SMGLIHRDVKPDNMLLD---KHGHLKLADFGT  188 (370)
T ss_pred             ---------------------------HHHHHHH---HHHHHHHHH--HCCeEecCCCHHHEEEC---CCCCEEEEeccc
Confidence                                       0003334   677888888  99999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +........       ....+.+||+.|+|||++....  ....|+.++|+||+||++|+|++|.+||.+.+.       
T Consensus       189 a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-------  252 (370)
T cd05621         189 CMKMDETGM-------VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-------  252 (370)
T ss_pred             ceecccCCc-------eecccCCCCcccCCHHHHhccC--CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-------
Confidence            875432111       1124678999999999996421  112478899999999999999999999987532       


Q ss_pred             CccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~  428 (539)
                              ...+..|....  +.+|.  +..++..+++||.+||..++.+  |++++|+++||||....+
T Consensus       253 --------~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~  312 (370)
T cd05621         253 --------VGTYSKIMDHKNSLNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW  312 (370)
T ss_pred             --------HHHHHHHHhCCcccCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence                    23455565433  44444  3468999999999999866654  889999999999987543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.2e-38  Score=325.63  Aligned_cols=253  Identities=25%  Similarity=0.402  Sum_probs=183.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|++..+++.||||++.+..   .........|+.++..+.+|++|+++++++++....+   .|  
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~---lv--   79 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLY---FV--   79 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEE---EE--
Confidence            467999999999999999999999999997532   1223346678888887777999999999887765433   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 + +              .+...+...                .....       
T Consensus        80 ----~E~~~-----------------~-g--------------~L~~~~~~~----------------~~~~~-------  100 (323)
T cd05616          80 ----MEYVN-----------------G-G--------------DLMYQIQQV----------------GRFKE-------  100 (323)
T ss_pred             ----EcCCC-----------------C-C--------------CHHHHHHHc----------------CCCCH-------
Confidence                11110                 0 0              000000000                00000       


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      ..+                  ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.....
T Consensus       101 ~~~------------------~~~~~q---i~~aL~~LH--~~~ivHrDlkp~Nill~---~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616         101 PHA------------------VFYAAE---IAIGLFFLH--SKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             HHH------------------HHHHHH---HHHHHHHHH--HCCEEecCCCHHHeEEC---CCCcEEEccCCCceecCCC
Confidence            000                  012333   667788888  99999999999999994   4456999999998743221


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..        ...+.+||+.|+|||++..      ..|+.++||||+||++|+|++|++||.+.+               
T Consensus       155 ~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~Pf~~~~---------------  205 (323)
T cd05616         155 GV--------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGED---------------  205 (323)
T ss_pred             CC--------ccccCCCChhhcCHHHhcC------CCCCCccchhchhHHHHHHHhCCCCCCCCC---------------
Confidence            11        2235789999999999863      468999999999999999999999998653               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-----HHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-----~e~l~Hpw~~~~~~  428 (539)
                      ...++..|....+.+|.    .++.++++||.+||++||.+|+++     .++++||||....+
T Consensus       206 ~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         206 EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             HHHHHHHHHhCCCCCCC----cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence            23466777777777774    589999999999999999999984     89999999987654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.1e-38  Score=325.21  Aligned_cols=252  Identities=27%  Similarity=0.446  Sum_probs=180.4

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      +.||+|+||.||+|.+..+++.||||++++..   .........|..++....+||||+++++++.+....+   .|   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~---lv---   74 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLF---FV---   74 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEE---EE---
Confidence            36999999999999999999999999996531   1223456678888877668999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                          .+|.-+ +              .+...+...                ...+       ..
T Consensus        75 --------------------~ey~~~-g--------------~L~~~l~~~----------------~~~~-------~~   96 (316)
T cd05619          75 --------------------MEYLNG-G--------------DLMFHIQSC----------------HKFD-------LP   96 (316)
T ss_pred             --------------------EeCCCC-C--------------cHHHHHHHc----------------CCCC-------HH
Confidence                                111000 0              000000000                0000       00


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .+                  ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......
T Consensus        97 ~~------------------~~~~~q---i~~al~~LH--~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05619          97 RA------------------TFYAAE---IICGLQFLH--SKGIVYRDLKLDNILLD---TDGHIKIADFGMCKENMLGD  150 (316)
T ss_pred             HH------------------HHHHHH---HHHHHHHHH--hCCeEeCCCCHHHEEEC---CCCCEEEccCCcceECCCCC
Confidence            00                  002333   667788888  99999999999999995   34569999999986432211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++..      ..|+.++|+||+||++|+|++|.+||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~---------------~  201 (316)
T cd05619         151 --------AKTCTFCGTPDYIAPEILLG------QKYNTSVDWWSFGVLLYEMLIGQSPFHGHD---------------E  201 (316)
T ss_pred             --------CceeeecCCccccCHHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCCC---------------H
Confidence                    12345689999999999863      468999999999999999999999997653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHH-HHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA-SVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~-e~l~Hpw~~~~~~  428 (539)
                      ..++..+..+.+.+|.    .++.++++||.+||.+||++|+++. ++++||||....+
T Consensus       202 ~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05619         202 EELFQSIRMDNPCYPR----WLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDW  256 (316)
T ss_pred             HHHHHHHHhCCCCCCc----cCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCH
Confidence            3456667666666653    4799999999999999999999996 9999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.3e-38  Score=326.50  Aligned_cols=261  Identities=25%  Similarity=0.379  Sum_probs=182.0

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+++.||+|++++..   ......+.+|+.++..+.+||||+++++++.+....+   .|   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~---lv---   74 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF---FV---   74 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEE---EE---
Confidence            36999999999999999999999999997532   1223456788888888778999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+.....+..+..                     
T Consensus        75 ---~E~~~-----------------~-~--------------~L~~~~~~~~~l~~~~~---------------------   98 (329)
T cd05618          75 ---IEYVN-----------------G-G--------------DLMFHMQRQRKLPEEHA---------------------   98 (329)
T ss_pred             ---EeCCC-----------------C-C--------------CHHHHHHHcCCCCHHHH---------------------
Confidence               11110                 0 0              00000000000000000                     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        99 --------------------~~i~~q---i~~~l~~lH--~~~ivH~Dikp~Nili~---~~~~~kL~DfG~~~~~~~~~  150 (329)
T cd05618          99 --------------------RFYSAE---ISLALNYLH--ERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCKEGLRPG  150 (329)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCeeeCCCCHHHEEEC---CCCCEEEeeCCccccccCCC
Confidence                                002333   667788888  99999999999999994   44569999999986432111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|+|||||++|+|++|.+||......+..      .....
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~------~~~~~  210 (329)
T cd05618         151 --------DTTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP------DQNTE  210 (329)
T ss_pred             --------CccccccCCccccCHHHHcC------CCCCCccceecccHHHHHHhhCCCCCccCCCcCCc------ccccH
Confidence                    12235789999999999863      46889999999999999999999999632111100      00112


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC------HHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS------AASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t------a~e~l~Hpw~~~~~~  428 (539)
                      ..+...+......+|.    .++.++++||++||.+||++|++      ++++++||||....+
T Consensus       211 ~~~~~~i~~~~~~~p~----~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         211 DYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             HHHHHHHhcCCCCCCC----CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            3455667777777774    58999999999999999999998      479999999987644

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.4e-38  Score=319.28  Aligned_cols=257  Identities=25%  Similarity=0.392  Sum_probs=178.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|.+..+|+.||||++.+...   .....+.+|+.++.++ +|+||++++++|.+....+   .|  
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~---lv--   78 (285)
T cd05631           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALC---LV--   78 (285)
T ss_pred             EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEE---EE--
Confidence            4679999999999999999999999999864321   2234567899999987 6999999999887654332   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                           .+|--+..+.            ......+... . +|                      
T Consensus        79 ---------------------~e~~~~g~L~------------~~~~~~~~~~-~-~~----------------------  101 (285)
T cd05631          79 ---------------------LTIMNGGDLK------------FHIYNMGNPG-F-DE----------------------  101 (285)
T ss_pred             ---------------------EEecCCCcHH------------HHHHhhCCCC-C-CH----------------------
Confidence                                 1110000000            0000000000 0 00                      


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      ..+                  ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......
T Consensus       102 ~~~------------------~~~~~q---i~~~l~~lH--~~~iiH~dikp~Nill~---~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631         102 QRA------------------IFYAAE---LCCGLEDLQ--RERIVYRDLKPENILLD---DRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             HHH------------------HHHHHH---HHHHHHHHH--hCCEEeCCCCHHHEEEC---CCCCEEEeeCCCcEEcCCC
Confidence            000                  012333   667788888  99999999999999994   4456999999998754321


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         .....+||+.|+|||++.+      ..|+.++||||+||++|+|++|++||.+.....           .
T Consensus       156 ~---------~~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----------~  209 (285)
T cd05631         156 E---------TVRGRVGTVGYMAPEVINN------EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-----------K  209 (285)
T ss_pred             C---------eecCCCCCCCccCHhhhcC------CCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-----------h
Confidence            1         1234689999999999863      468999999999999999999999998754221           1


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                      .+.+...+......++    ..++.++++||++||..||.+|++     ++++++||||....+
T Consensus       210 ~~~~~~~~~~~~~~~~----~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         210 REEVDRRVKEDQEEYS----EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF  269 (285)
T ss_pred             HHHHHHHhhcccccCC----ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence            1223344444444444    368999999999999999999997     899999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.3e-38  Score=338.60  Aligned_cols=282  Identities=24%  Similarity=0.384  Sum_probs=174.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|.+ +++||+|+||.||+|.+..+++.||||++.+..    ....+|+.+|..+ +|||||+++++|........    
T Consensus        67 ~y~~-~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~----  136 (440)
T PTZ00036         67 SYKL-GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKN----  136 (440)
T ss_pred             eEEE-eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhc-CCCCCcceeeeEeecccccC----
Confidence            4655 678999999999999999999999999885422    2345799999987 59999999988754321100    


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            ..++.+        .-+.+|.-+ .               +..      +     +..+.. ....    ....
T Consensus       137 ------~~~~~l--------~lvmE~~~~-~---------------l~~------~-----~~~~~~-~~~~----l~~~  170 (440)
T PTZ00036        137 ------EKNIFL--------NVVMEFIPQ-T---------------VHK------Y-----MKHYAR-NNHA----LPLF  170 (440)
T ss_pred             ------CCceEE--------EEEEecCCc-c---------------HHH------H-----HHHHhh-cCCC----CCHH
Confidence                  001000        011222100 0               000      0     000000 0000    0000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      .+..                     +..|   ++.++.|+|  ++||+||||||+|||+...  .+.+||+|||+|+.+.
T Consensus       171 ~~~~---------------------~~~q---i~~gL~yLH--~~~IiHrDLKp~NILl~~~--~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        171 LVKL---------------------YSYQ---LCRALAYIH--SKFICHRDLKPQNLLIDPN--THTLKLCDFGSAKNLL  222 (440)
T ss_pred             HHHH---------------------HHHH---HHHHHHHHH--HCCEecCCcCHHHEEEcCC--CCceeeeccccchhcc
Confidence            0000                     2233   667788888  9999999999999999532  2358999999997543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ...         ...+.+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+..........
T Consensus       223 ~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~  288 (440)
T PTZ00036        223 AGQ---------RSVSYICSRFYRAPELMLG-----ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG  288 (440)
T ss_pred             CCC---------CcccCCCCcCccCHHHhcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            221         1235689999999999863     24689999999999999999999999987653221000000000


Q ss_pred             hhHHHHHHHHh--cCCCCCCCCC--------CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        368 ACQEILFHSIQ--QGHYDFPEGE--------WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       368 ~~~~~~~~~i~--~~~~~~p~~~--------~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .+....+..+.  ...+.+|...        ....++++++||++||++||.+|+|+.|+|+||||....
T Consensus       289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            00000000000  0111222110        024688999999999999999999999999999997643

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=6.2e-39  Score=332.83  Aligned_cols=264  Identities=28%  Similarity=0.478  Sum_probs=181.3

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|+.++..+ +||||+++++++++....+   
T Consensus         3 f~~-~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~---   77 (360)
T cd05627           3 FES-LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLY---   77 (360)
T ss_pred             ceE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEE---
Confidence            443 467999999999999999999999999996421   22345677899999886 6999999999987765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.....+ +|..                
T Consensus        78 lv------~E~~~-----------------g-g--------------~L~~~l~~~~~l-~~~~----------------  102 (360)
T cd05627          78 LI------MEFLP-----------------G-G--------------DMMTLLMKKDTL-SEEA----------------  102 (360)
T ss_pred             EE------EeCCC-----------------C-c--------------cHHHHHHhcCCC-CHHH----------------
Confidence            11      11110                 0 0              000000000000 0000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                              ...|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       103 ------------------------~~~~~~q---i~~~L~~lH--~~givHrDLkp~NIli~---~~~~vkL~DfG~~~~  150 (360)
T cd05627         103 ------------------------TQFYIAE---TVLAIDAIH--QLGFIHRDIKPDNLLLD---AKGHVKLSDFGLCTG  150 (360)
T ss_pred             ------------------------HHHHHHH---HHHHHHHHH--HCCeEccCCCHHHEEEC---CCCCEEEeeccCCcc
Confidence                                    0013344   667788888  99999999999999994   456799999999875


Q ss_pred             cccCCCCC-------C--------------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhH
Q psy16343        286 IKFNTSVH-------S--------------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  338 (539)
Q Consensus       286 ~~~~~~~~-------~--------------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGv  338 (539)
                      +.......       .                    ........+.+||+.|+|||++.+      ..|+.++|||||||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGv  224 (360)
T cd05627         151 LKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ------TGYNKLCDWWSLGV  224 (360)
T ss_pred             cccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC------CCCCCcceeccccc
Confidence            43211000       0                    000011235689999999999863      57899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccCCCC---
Q psy16343        339 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS---  413 (539)
Q Consensus       339 ily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t---  413 (539)
                      ++|+|++|++||.+.+.               ...+..|...  .+.+|..  ..++++++|||.+|+ .||.+|++   
T Consensus       225 ilyel~tG~~Pf~~~~~---------------~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~-~~p~~R~~~~~  286 (360)
T cd05627         225 IMYEMLIGYPPFCSETP---------------QETYRKVMNWKETLVFPPE--VPISEKAKDLILRFC-TDSENRIGSNG  286 (360)
T ss_pred             eeeecccCCCCCCCCCH---------------HHHHHHHHcCCCceecCCC--CCCCHHHHHHHHHhc-cChhhcCCCCC
Confidence            99999999999987542               2345555543  3445542  358999999999987 49999994   


Q ss_pred             HHHHhcCCCccCCCC
Q psy16343        414 AASVLKHPWISTAGT  428 (539)
Q Consensus       414 a~e~l~Hpw~~~~~~  428 (539)
                      ++|+++||||.+..+
T Consensus       287 ~~ei~~hp~f~~~~~  301 (360)
T cd05627         287 VEEIKSHPFFEGVDW  301 (360)
T ss_pred             HHHHhcCCCCCCCCH
Confidence            799999999998765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.7e-38  Score=325.93  Aligned_cols=283  Identities=22%  Similarity=0.307  Sum_probs=178.7

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|++..++..||||++....  .....++.+|+++++++ +||||+++++++.......    
T Consensus         2 y~i-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~----   75 (338)
T cd07859           2 YKI-QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRRE----   75 (338)
T ss_pred             eEE-EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCC----
Confidence            444 478999999999999999999999999986422  12234678999999987 5999999998875432110    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                             ..++.+          +.++. + +              .+...+...                ..       
T Consensus        76 -------~~~~~l----------v~e~~-~-~--------------~L~~~l~~~----------------~~-------   99 (338)
T cd07859          76 -------FKDIYV----------VFELM-E-S--------------DLHQVIKAN----------------DD-------   99 (338)
T ss_pred             -------CceEEE----------EEecC-C-C--------------CHHHHHHhc----------------cc-------
Confidence                   000110          11110 0 0              000000000                00       


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ++...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       100 ~~~~~~~------------------~i~~q---i~~aL~~LH--~~~ivH~dlkp~NIll~---~~~~~kL~Dfg~~~~~  153 (338)
T cd07859         100 LTPEHHQ------------------FFLYQ---LLRALKYIH--TANVFHRDLKPKNILAN---ADCKLKICDFGLARVA  153 (338)
T ss_pred             CCHHHHH------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHeEEC---CCCcEEEccCcccccc
Confidence            0000000                  03334   677888888  99999999999999994   4466999999998753


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......     .......+||+.|+|||++.+.    ...|+.++|||||||++|+|++|++||.+.+............
T Consensus       154 ~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~----~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~  224 (338)
T cd07859         154 FNDTPT-----AIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL  224 (338)
T ss_pred             ccccCc-----cccccCCCCCCCcCCHHHHhcc----ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence            221110     0112356899999999998631    2468899999999999999999999998754211000000000


Q ss_pred             hhhH------------HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        367 HACQ------------EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       367 ~~~~------------~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ....            ...+..+...........++.+++++++||.+||..||++|||++|+|+||||.....
T Consensus       225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            0000            0011111111111111234567899999999999999999999999999999986554

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.7e-38  Score=330.65  Aligned_cols=263  Identities=26%  Similarity=0.437  Sum_probs=184.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|++..++..||+|++++..   ......+.+|+.++..+ +||||++++++++++...+ 
T Consensus        43 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~-  119 (370)
T cd05596          43 EDFDV-IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLY-  119 (370)
T ss_pred             HHcEE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEE-
Confidence            34554 468999999999999999999999999996532   12233466899999886 6999999999887765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+... . -||                
T Consensus       120 --lv------~Ey~~-----------------g-g--------------~L~~~l~~~-~-l~~----------------  141 (370)
T cd05596         120 --MV------MEYMP-----------------G-G--------------DLVNLMSNY-D-IPE----------------  141 (370)
T ss_pred             --EE------EcCCC-----------------C-C--------------cHHHHHHhc-C-CCH----------------
Confidence              11      11110                 0 0              000000000 0 000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                        -|..                      .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       142 --~~~~----------------------~~~~q---i~~aL~~LH--~~~ivHrDLkp~NILl~---~~~~~kL~DfG~~  189 (370)
T cd05596         142 --KWAR----------------------FYTAE---VVLALDAIH--SMGFIHRDVKPDNMLLD---KSGHLKLADFGTC  189 (370)
T ss_pred             --HHHH----------------------HHHHH---HHHHHHHHH--HCCeeccCCCHHHEEEc---CCCCEEEEeccce
Confidence              0000                      02233   667788888  99999999999999994   4567999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........       ....+.+||+.|+|||++....  ....|+.++|+|||||++|+|++|.+||.+.+.        
T Consensus       190 ~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------  252 (370)
T cd05596         190 MKMDANGM-------VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------  252 (370)
T ss_pred             eeccCCCc-------ccCCCCCCCcCeECHHHhccCC--CCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--------
Confidence            75432211       0123568999999999986421  123488999999999999999999999987542        


Q ss_pred             ccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~  428 (539)
                             ...+..|....  +.+|.  +..+|.++++||++||..+|++  |++++|+++||||....+
T Consensus       253 -------~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         253 -------VGTYSKIMDHKNSLTFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             -------HHHHHHHHcCCCcCCCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence                   23556665543  44443  3468999999999999999998  999999999999987554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-39  Score=330.17  Aligned_cols=251  Identities=27%  Similarity=0.486  Sum_probs=179.5

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhc--CCCCeeeeeeeecccccccccCCeeee
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ||+|+||.||+|++..+++.||||++.+...   ........|..++....  +||||++++++|++....+   .|   
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~---lv---   74 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLY---LV---   74 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEE---EE---
Confidence            6999999999999999999999999964321   12234556777776654  7999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+.....+..+                    ..-
T Consensus        75 ---~e~~~-----------------~-g--------------~L~~~l~~~~~~~~~--------------------~~~   99 (330)
T cd05586          75 ---TDYMS-----------------G-G--------------ELFWHLQKEGRFSED--------------------RAK   99 (330)
T ss_pred             ---EcCCC-----------------C-C--------------hHHHHHHhcCCCCHH--------------------HHH
Confidence               11110                 0 0              000000000000000                    000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......
T Consensus       100 ~---------------------~~~q---il~al~~LH--~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a~~~~~~~  150 (330)
T cd05586         100 F---------------------YIAE---LVLALEHLH--KYDIVYRDLKPENILLD---ATGHIALCDFGLSKANLTDN  150 (330)
T ss_pred             H---------------------HHHH---HHHHHHHHH--HCCeEeccCCHHHeEEC---CCCCEEEecCCcCcCCCCCC
Confidence            0                     3334   677888888  99999999999999995   44569999999986432211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++..     ...|+.++|+|||||++|+|++|..||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DvwslGvil~elltG~~Pf~~~~---------------~  202 (330)
T cd05586         151 --------KTTNTFCGTTEYLAPEVLLD-----EKGYTKHVDFWSLGVLVFEMCCGWSPFYAED---------------T  202 (330)
T ss_pred             --------CCccCccCCccccCHHHHcC-----CCCCCCccceeccccEEEEeccCCCCCCCCC---------------H
Confidence                    12346789999999999863     2458899999999999999999999998753               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC----CHHHHhcCCCccCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL----SAASVLKHPWISTAG  427 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~----ta~e~l~Hpw~~~~~  427 (539)
                      ..++..|..+...+|..   .+++++++||++||.+||++||    +++++++||||....
T Consensus       203 ~~~~~~i~~~~~~~~~~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         203 QQMYRNIAFGKVRFPKN---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             HHHHHHHHcCCCCCCCc---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence            34667787788777753   5799999999999999999998    689999999998654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.5e-38  Score=325.22  Aligned_cols=253  Identities=26%  Similarity=0.404  Sum_probs=182.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|.+..+++.||||++.+..   ......+..|++++..+.+|++|+++++++.+....+   .|  
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~---lv--   79 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY---FV--   79 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEE---EE--
Confidence            467999999999999999999999999996421   2234567788999888765677999998887654433   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 + +              .+...+...... +|..                    
T Consensus        80 ----~E~~~-----------------~-g--------------~L~~~~~~~~~~-~~~~--------------------  102 (324)
T cd05587          80 ----MEYVN-----------------G-G--------------DLMYHIQQVGKF-KEPH--------------------  102 (324)
T ss_pred             ----EcCCC-----------------C-C--------------cHHHHHHHcCCC-CHHH--------------------
Confidence                11110                 0 0              000000000000 0000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                          ...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......
T Consensus       103 --------------------~~~~~~q---i~~al~~lH--~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587         103 --------------------AVFYAAE---IAIGLFFLH--SKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             --------------------HHHHHHH---HHHHHHHHH--HCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCC
Confidence                                0002334   667788888  99999999999999995   3456999999998643221


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .        ....+.+||+.|+|||++.+      ..|+.++||||+||++|+|++|++||.+.+               
T Consensus       155 ~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~---------------  205 (324)
T cd05587         155 G--------KTTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGED---------------  205 (324)
T ss_pred             C--------CceeeecCCccccChhhhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCC---------------
Confidence            1        12345689999999999863      468899999999999999999999997653               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-----HHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-----~e~l~Hpw~~~~~~  428 (539)
                      ...++..|....+.+|.    .++.++++||++||.+||.+|+++     +++++||||....+
T Consensus       206 ~~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         206 EDELFQSIMEHNVSYPK----SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            23466777777777764    589999999999999999999986     89999999987554

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.1e-38  Score=332.80  Aligned_cols=265  Identities=26%  Similarity=0.425  Sum_probs=180.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|++..+++.||||++.+..   ......+.+|+++|..+ +||||+++++.|+++...+   
T Consensus         3 y~~-~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~---   77 (376)
T cd05598           3 FVK-IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLY---   77 (376)
T ss_pred             ceE-EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEE---
Confidence            444 467999999999999999999999999996432   12345677899999987 5999999999997765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.....++.+..                
T Consensus        78 lv------~E~~~-----------------~-g--------------~L~~~i~~~~~~~~~~~----------------  103 (376)
T cd05598          78 FV------MDYIP-----------------G-G--------------DMMSLLIRLGIFEEDLA----------------  103 (376)
T ss_pred             EE------EeCCC-----------------C-C--------------cHHHHHHhcCCCCHHHH----------------
Confidence            11      12110                 0 0              00000000000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                          -                     .|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+|..
T Consensus       104 ----~---------------------~~~~q---i~~al~~lH--~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a~~  150 (376)
T cd05598         104 ----R---------------------FYIAE---LTCAIESVH--KMGFIHRDIKPDNILID---RDGHIKLTDFGLCTG  150 (376)
T ss_pred             ----H---------------------HHHHH---HHHHHHHHH--HCCeEeCCCCHHHEEEC---CCCCEEEEeCCCCcc
Confidence                0                     02334   667788888  99999999999999994   445699999999864


Q ss_pred             cccCCCCC--------------C---------------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcc
Q psy16343        286 IKFNTSVH--------------S---------------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  330 (539)
Q Consensus       286 ~~~~~~~~--------------~---------------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~  330 (539)
                      +.......              .                     ........+.+||+.|||||++.+      ..|+.+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~  224 (376)
T cd05598         151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR------TGYTQL  224 (376)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC------CCCCcc
Confidence            32110000              0                     000001124689999999999863      568999


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccC
Q psy16343        331 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK  410 (539)
Q Consensus       331 ~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~  410 (539)
                      +|||||||++|+|++|++||.+.+.               ......+......++...+..+++++++||.+|+ .||.+
T Consensus       225 ~DiwSlGvilyell~G~~Pf~~~~~---------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~  288 (376)
T cd05598         225 CDWWSVGVILYEMLVGQPPFLADTP---------------AETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAED  288 (376)
T ss_pred             eeeeeccceeeehhhCCCCCCCCCH---------------HHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhh
Confidence            9999999999999999999987542               2233344433333333334578999999999976 59999


Q ss_pred             CC---CHHHHhcCCCccCCC
Q psy16343        411 RL---SAASVLKHPWISTAG  427 (539)
Q Consensus       411 R~---ta~e~l~Hpw~~~~~  427 (539)
                      |+   +++|+++||||....
T Consensus       289 R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         289 RLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             cCCCCCHHHHhCCCCcCCCC
Confidence            99   999999999998654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.4e-38  Score=325.23  Aligned_cols=252  Identities=28%  Similarity=0.422  Sum_probs=177.6

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||+||+|++..+|+.||||++.+..   .....++..|+..+.+..+||||+++++++++....+   .|   
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~---lv---   74 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLY---FV---   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEE---EE---
Confidence            36999999999999999999999999996432   1223445666665544457999999999887654433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+.....+ +|                   ...-
T Consensus        75 ---~e~~~-----------------~-g--------------~L~~~l~~~~~~-~~-------------------~~~~   99 (323)
T cd05575          75 ---LDYVN-----------------G-G--------------ELFFHLQRERSF-PE-------------------PRAR   99 (323)
T ss_pred             ---EcCCC-----------------C-C--------------CHHHHHHhcCCC-CH-------------------HHHH
Confidence               11110                 0 0              000000000000 00                   0000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus       100 ~---------------------~~~q---i~~~l~~lH--~~givH~dikp~NIll~---~~~~~kl~Dfg~~~~~~~~~  150 (323)
T cd05575         100 F---------------------YAAE---IASALGYLH--SLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGIEHS  150 (323)
T ss_pred             H---------------------HHHH---HHHHHHHHH--HCCeEeCCCCHHHeEEC---CCCcEEEeccCCCcccccCC
Confidence            0                     2233   667788888  99999999999999994   44569999999986432111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ......+||+.|+|||++..      ..|+.++|+|||||++|+|++|.+||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~---------------~  201 (323)
T cd05575         151 --------KTTSTFCGTPEYLAPEVLRK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---------------T  201 (323)
T ss_pred             --------CccccccCChhhcChhhhcC------CCCCccccccccchhhhhhhcCCCCCCCCC---------------H
Confidence                    12235689999999999863      468999999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH----HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA----ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta----~e~l~Hpw~~~~~~  428 (539)
                      ..++..+..+...++.    .++.++.+||++||++||.+|+++    .+++.||||....+
T Consensus       202 ~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         202 AEMYDNILNKPLRLKP----NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             HHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            3466677777666654    579999999999999999999997    69999999976543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=2.7e-38  Score=323.21  Aligned_cols=252  Identities=27%  Similarity=0.421  Sum_probs=180.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhh--cCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHC--QGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~--~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|.+..+++.||||++++..   ......+.+|+.++..+  .+||||+++++++++....+   .|
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~---lv   80 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC---FV   80 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE---EE
Confidence            467999999999999999999999999996432   12234566676665432  36999999999987765433   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            +|.+-                 + +              .+...+.. ..+..+                 .+ 
T Consensus        81 ------~E~~~-----------------~-~--------------~L~~~~~~-~~l~~~-----------------~~-  103 (324)
T cd05589          81 ------MEYAA-----------------G-G--------------DLMMHIHT-DVFSEP-----------------RA-  103 (324)
T ss_pred             ------EcCCC-----------------C-C--------------cHHHHhhc-CCCCHH-----------------HH-
Confidence                  11110                 0 0              00000000 000000                 00 


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                             ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++...
T Consensus       104 -----------------------~~~~~q---i~~al~~lH--~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~~~~  152 (324)
T cd05589         104 -----------------------VFYAAC---VVLGLQYLH--ENKIVYRDLKLDNLLLD---TEGFVKIADFGLCKEGM  152 (324)
T ss_pred             -----------------------HHHHHH---HHHHHHHHH--hCCeEecCCCHHHeEEC---CCCcEEeCcccCCccCC
Confidence                                   003334   667788888  99999999999999995   44569999999986432


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ...        ....+.+||+.|+|||++.+      ..|+.++|+|||||++|+|++|.+||.+.+             
T Consensus       153 ~~~--------~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~G~~pf~~~~-------------  205 (324)
T cd05589         153 GFG--------DRTSTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIYEMLVGESPFPGDD-------------  205 (324)
T ss_pred             CCC--------CcccccccCccccCHhHhcC------CCCCcccchhhHHHHHHHHHhCCCCCCCCC-------------
Confidence            111        12346789999999999863      468899999999999999999999998653             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                        ...+...+..+.+.+|.    .+++++.+||.+||.+||.+||     ++.++++||||....+
T Consensus       206 --~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~  265 (324)
T cd05589         206 --EEEVFDSIVNDEVRYPR----FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW  265 (324)
T ss_pred             --HHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence              23456677777777764    5899999999999999999999     6999999999986543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2e-38  Score=340.33  Aligned_cols=275  Identities=22%  Similarity=0.293  Sum_probs=167.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc-----CCCCeeeeeeeecccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-----GHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~-----~HpnIv~l~~~~~~~~~~  121 (539)
                      +.|++ .+.||+|+||+||+|.+..+++.||||++++... .......|++++..+.     +|++|++++++|.....+
T Consensus       129 ~~y~i-~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~  206 (467)
T PTZ00284        129 QRFKI-LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH  206 (467)
T ss_pred             CcEEE-EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence            34554 4689999999999999999999999999964322 2234556777766543     355688888888654332


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .   -|          +            .++. + +              .+...+...                ....
T Consensus       207 ~---~i----------v------------~~~~-g-~--------------~l~~~l~~~----------------~~l~  229 (467)
T PTZ00284        207 M---CI----------V------------MPKY-G-P--------------CLLDWIMKH----------------GPFS  229 (467)
T ss_pred             E---EE----------E------------Eecc-C-C--------------CHHHHHHHc----------------CCCC
Confidence            2   01          0            0000 0 0              000000000                0000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCC---------
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQ---------  271 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~---------  271 (539)
                          ...+..                     +..|   ++.++.|+|  + .|||||||||+|||+...+.         
T Consensus       230 ----~~~~~~---------------------i~~q---i~~aL~yLH--~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~  279 (467)
T PTZ00284        230 ----HRHLAQ---------------------IIFQ---TGVALDYFH--TELHLMHTDLKPENILMETSDTVVDPVTNRA  279 (467)
T ss_pred             ----HHHHHH---------------------HHHH---HHHHHHHHH--hcCCeecCCCCHHHEEEecCCcccccccccc
Confidence                000001                     3334   667788888  7 59999999999999965431         


Q ss_pred             ----CCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC
Q psy16343        272 ----LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY  347 (539)
Q Consensus       272 ----~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~  347 (539)
                          ...+||+|||++.....           ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|+
T Consensus       280 ~~~~~~~vkl~DfG~~~~~~~-----------~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGvil~elltG~  342 (467)
T PTZ00284        280 LPPDPCRVRICDLGGCCDERH-----------SRTAIVSTRHYRSPEVVLG------LGWMYSTDMWSMGCIIYELYTGK  342 (467)
T ss_pred             cCCCCceEEECCCCccccCcc-----------ccccccCCccccCcHHhhc------CCCCcHHHHHHHHHHHHHHHhCC
Confidence                12489999998753211           1235789999999999963      46999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCccchhh------------HHHHHHHHhcCCCCCCCC---------CCC--CCCHHHHHHHHHhc
Q psy16343        348 PPFYGNCGEDCGWQRGETCHAC------------QEILFHSIQQGHYDFPEG---------EWS--TISDEAKDLIRRLL  404 (539)
Q Consensus       348 ~PF~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~~~~~p~~---------~~~--~~s~~~~dli~~lL  404 (539)
                      +||.+.+..+............            ...++..+..-...+...         .+.  .-++.+.|||.+||
T Consensus       343 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL  422 (467)
T PTZ00284        343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLL  422 (467)
T ss_pred             CCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhC
Confidence            9998754321100000000000            000000000000000000         000  12467889999999


Q ss_pred             cccccCCCCHHHHhcCCCccCCC
Q psy16343        405 VKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       405 ~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ++||.+|+||+|+|+||||....
T Consensus       423 ~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        423 HYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             CcChhhCCCHHHHhcCccccccC
Confidence            99999999999999999998643

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-38  Score=332.65  Aligned_cols=267  Identities=21%  Similarity=0.260  Sum_probs=173.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|.+ .+.||+|+||.||+|.+..+++.||||...+      ..+.+|++++.++ +|||||+++++|......+   .+
T Consensus        93 ~y~~-~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~---lv  161 (391)
T PHA03212         93 GFSI-LETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTC---LI  161 (391)
T ss_pred             CcEE-EEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeE---EE
Confidence            4655 4789999999999999999999999997642      3567899999997 5999999999886543322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .+.+                  . +              .+...+...                .... ..++ 
T Consensus       162 ------~e~~------------------~-~--------------~L~~~l~~~----------------~~l~-~~~~-  184 (391)
T PHA03212        162 ------LPRY------------------K-T--------------DLYCYLAAK----------------RNIA-ICDI-  184 (391)
T ss_pred             ------EecC------------------C-C--------------CHHHHHHhc----------------CCCC-HHHH-
Confidence                  0000                  0 0              000000000                0000 0000 


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                             ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+|+...
T Consensus       185 -----------------------~~i~~q---i~~aL~ylH--~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~  233 (391)
T PHA03212        185 -----------------------LAIERS---VLRAIQYLH--ENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPV  233 (391)
T ss_pred             -----------------------HHHHHH---HHHHHHHHH--hCCcccCCCChHhEEEc---CCCCEEEEeCCcccccc
Confidence                                   003344   677888888  89999999999999994   44569999999986422


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc--
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET--  365 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~--  365 (539)
                      ...       .......+||+.|+|||++.+      ..|+.++||||+||++|+|++|..||.+....+........  
T Consensus       234 ~~~-------~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~  300 (391)
T PHA03212        234 DIN-------ANKYYGWAGTIATNAPELLAR------DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIK  300 (391)
T ss_pred             ccc-------ccccccccCccCCCChhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHH
Confidence            111       112345689999999999863      46899999999999999999999888764322211000000  


Q ss_pred             ----------------chhhHHHHHHHHhcCCCCCC--CCCCC---CCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        366 ----------------CHACQEILFHSIQQGHYDFP--EGEWS---TISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       366 ----------------~~~~~~~~~~~i~~~~~~~p--~~~~~---~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                      ........+..........|  ...|.   .++.++++||.+||..||.+||||+|+|+||||.
T Consensus       301 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~  380 (391)
T PHA03212        301 LIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ  380 (391)
T ss_pred             HHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence                            00000001101111111111  11122   3567899999999999999999999999999997


Q ss_pred             CC
Q psy16343        425 TA  426 (539)
Q Consensus       425 ~~  426 (539)
                      ..
T Consensus       381 ~~  382 (391)
T PHA03212        381 DI  382 (391)
T ss_pred             cC
Confidence            64

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.1e-38  Score=315.41  Aligned_cols=261  Identities=26%  Similarity=0.370  Sum_probs=169.5

Q ss_pred             hhcccCceeceeCceEEEEEEEcc-CCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhc--CCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNIL-TELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~-t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|++ .+.||+|+||.||+|.+.. ++..||||++....  ........+|+.++..+.  +||||+++++++.......
T Consensus         2 ~Y~~-~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           2 QYEC-VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             Ccce-eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            4555 4679999999999999864 46889999986432  122345667888877653  5999999999875321110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                 ..++.+          +.++  ..+              .+..      |     +...   ...... 
T Consensus        81 -----------~~~~~l----------v~e~--~~~--------------~l~~------~-----~~~~---~~~~~~-  108 (290)
T cd07862          81 -----------ETKLTL----------VFEH--VDQ--------------DLTT------Y-----LDKV---PEPGVP-  108 (290)
T ss_pred             -----------CCcEEE----------EEcc--CCC--------------CHHH------H-----HHhC---CCCCCC-
Confidence                       000110          0111  000              0000      0     0000   000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       109 ~~~~~------------------------~i~~q---i~~aL~~lH--~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg~  156 (290)
T cd07862         109 TETIK------------------------DMMFQ---LLRGLDFLH--SHRVVHRDLKPQNILVT---SSGQIKLADFGL  156 (290)
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--HCCeeeCCCCHHHEEEc---CCCCEEEccccc
Confidence            00000                        03334   677888888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         .....+||+.|+|||++..      ..|+.++|+||+||++|+|++|.+||.+.+..+     
T Consensus       157 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-----  216 (290)
T cd07862         157 ARIYSFQM---------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-----  216 (290)
T ss_pred             eEeccCCc---------ccccccccccccChHHHhC------CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-----
Confidence            87543221         1235689999999999863      468899999999999999999999998764321     


Q ss_pred             CccchhhHHHHHHHHhcCC-----CCC------C------------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGH-----YDF------P------------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~-----~~~------p------------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                ....|....     ..+      +            ...+..+++.+++||.+||+.||++|||+.|+|+
T Consensus       217 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         217 ----------QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             ----------HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence                      111111100     000      0            0112357889999999999999999999999999


Q ss_pred             CCCc
Q psy16343        420 HPWI  423 (539)
Q Consensus       420 Hpw~  423 (539)
                      ||||
T Consensus       287 hp~f  290 (290)
T cd07862         287 HPYF  290 (290)
T ss_pred             CCCC
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2e-38  Score=323.38  Aligned_cols=252  Identities=27%  Similarity=0.425  Sum_probs=182.3

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||+||+|.+..++..||||++.+..   ......+.+|++++..+.+||||+++++++++....+   .|   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~---lv---   74 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLF---FV---   74 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEE---EE---
Confidence            36999999999999999999999999997532   2233456788888887768999999999987655432   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+...                ..+.       ..
T Consensus        75 ---~e~~~-----------------~-~--------------~L~~~~~~~----------------~~l~-------~~   96 (318)
T cd05570          75 ---MEYVN-----------------G-G--------------DLMFHIQRS----------------GRFD-------EP   96 (318)
T ss_pred             ---EcCCC-----------------C-C--------------CHHHHHHHc----------------CCCC-------HH
Confidence               11110                 0 0              000000000                0000       00


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .+.                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        97 ~~~------------------~~~~q---i~~~l~~LH--~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~  150 (318)
T cd05570          97 RAR------------------FYAAE---IVLGLQFLH--ERGIIYRDLKLDNVLLD---SEGHIKIADFGMCKEGILGG  150 (318)
T ss_pred             HHH------------------HHHHH---HHHHHHHHH--hCCeEccCCCHHHeEEC---CCCcEEecccCCCeecCcCC
Confidence            000                  02233   667788888  99999999999999994   44569999999986422111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|+||+||++|+|++|..||.+.+               .
T Consensus       151 --------~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslGvil~~l~~G~~pf~~~~---------------~  201 (318)
T cd05570         151 --------VTTSTFCGTPDYIAPEILSY------QPYGPAVDWWALGVLLYEMLAGQSPFEGDD---------------E  201 (318)
T ss_pred             --------CcccceecCccccCHHHhcC------CCCCcchhhhhHHHHHHHHhhCCCCCCCCC---------------H
Confidence                    12235689999999999863      468899999999999999999999997653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-----HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-----~e~l~Hpw~~~~~~  428 (539)
                      ..++..+....+.+|.    .++.++++||++||.+||++||++     .+++.||||....+
T Consensus       202 ~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~  260 (318)
T cd05570         202 DELFQSILEDEVRYPR----WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW  260 (318)
T ss_pred             HHHHHHHHcCCCCCCC----cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            3456677777777664    589999999999999999999999     99999999987654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.4e-38  Score=319.03  Aligned_cols=270  Identities=22%  Similarity=0.310  Sum_probs=175.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |.+ .+.||+|+||.||+|++..+++.||||++....  ......+.+|++++..+ +||||++++++++.....+   .
T Consensus         3 y~~-~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---l   77 (287)
T cd07848           3 FEV-LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLY---L   77 (287)
T ss_pred             ceE-EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEE---E
Confidence            554 467999999999999999999999999986432  22345678899999987 5999999999887654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-              .|+...               +   ......+..+.                 +
T Consensus        78 v------~e~~~--------------~~~l~~---------------~---~~~~~~~~~~~-----------------~  102 (287)
T cd07848          78 V------FEYVE--------------KNMLEL---------------L---EEMPNGVPPEK-----------------V  102 (287)
T ss_pred             E------EecCC--------------CCHHHH---------------H---HhcCCCCCHHH-----------------H
Confidence            1      11110              000000               0   00000000000                 0


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +   .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       103 ~---~---------------------~~~q---i~~~L~~lH--~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~~~  150 (287)
T cd07848         103 R---S---------------------YIYQ---LIKAIHWCH--KNDIVHRDIKPENLLIS---HNDVLKLCDFGFARNL  150 (287)
T ss_pred             H---H---------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHEEEc---CCCcEEEeeccCcccc
Confidence            0   0                     3334   667788888  99999999999999994   4456999999998765


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....       ......+||+.|+|||++.+      ..|+.++|+||+||++|+|++|++||.+.+..+......+..
T Consensus       151 ~~~~~-------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~  217 (287)
T cd07848         151 SEGSN-------ANYTEYVATRWYRSPELLLG------APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL  217 (287)
T ss_pred             ccccc-------ccccccccccccCCcHHHcC------CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence            32211       11235689999999999863      468899999999999999999999998754221100000000


Q ss_pred             hhhHHHHHHHHh-c---CCCCCCC---------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQ-Q---GHYDFPE---------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~-~---~~~~~p~---------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ............ .   ....+|.         ..+..+|.+++|||++||++||++|||++|+|+||||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            000000000000 0   0011111         1123478999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.9e-38  Score=322.97  Aligned_cols=250  Identities=32%  Similarity=0.494  Sum_probs=178.2

Q ss_pred             ceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         54 EILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.||+|+||.||+|++.   .+++.||||++.+..    ......+.+|++++..+ +||||++++++|+.+...+   .
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~---l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLY---L   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEE---E
Confidence            47999999999999864   478899999996421    12234567899999987 5999999999987664332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-                 + +              .+...+...... +|                   
T Consensus        78 v------~e~~~-----------------~-~--------------~L~~~~~~~~~~-~~-------------------   99 (323)
T cd05584          78 I------LEYLS-----------------G-G--------------ELFMHLEREGIF-ME-------------------   99 (323)
T ss_pred             E------EeCCC-----------------C-c--------------hHHHHHHHcCCC-CH-------------------
Confidence            1      11110                 0 0              000000000000 00                   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ...                     +.+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       100 ~~~---------------------~~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~  150 (323)
T cd05584         100 DTA---------------------CFYLSE---ISLALEHLH--QQGIIYRDLKPENILLD---AQGHVKLTDFGLCKES  150 (323)
T ss_pred             HHH---------------------HHHHHH---HHHHHHHHH--HCCeecCCCCHHHeEEC---CCCCEEEeeCcCCeec
Confidence            000                     002333   667788888  99999999999999994   4467999999998643


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        .....+||+.|+|||++.+      ..++.++|||||||++|+|++|++||.+.+            
T Consensus       151 ~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~pf~~~~------------  204 (323)
T cd05584         151 IHEGT--------VTHTFCGTIEYMAPEILMR------SGHGKAVDWWSLGALMYDMLTGAPPFTAEN------------  204 (323)
T ss_pred             ccCCC--------cccccCCCccccChhhccC------CCCCCcceecccHHHHHHHhcCCCCCCCCC------------
Confidence            22111        1235689999999999863      468889999999999999999999997653            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAG  427 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~  427 (539)
                         .......+..+...+|.    .+++++++||++||.+||++|+     +++++++||||....
T Consensus       205 ---~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~  263 (323)
T cd05584         205 ---RKKTIDKILKGKLNLPP----YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVN  263 (323)
T ss_pred             ---HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCC
Confidence               23355667777777764    5799999999999999999999     899999999997643

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=7.5e-38  Score=313.74  Aligned_cols=264  Identities=25%  Similarity=0.357  Sum_probs=170.3

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhc--CCCCeeeeeeeeccccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |++ .+.||+|+||.||+|.++.+++.||+|++.....  .......+|++++..+.  +||||+++++++.......  
T Consensus         2 y~~-~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~--   78 (288)
T cd07863           2 YEP-VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR--   78 (288)
T ss_pred             ceE-eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC--
Confidence            444 4679999999999999999999999999864321  12235667888777653  6999999999886532110  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                               ...+.+          +.++  ..+              .+...+..        .      ....+    
T Consensus        79 ---------~~~~~l----------v~e~--~~~--------------~l~~~~~~--------~------~~~~~----  105 (288)
T cd07863          79 ---------ETKVTL----------VFEH--VDQ--------------DLRTYLDK--------V------PPPGL----  105 (288)
T ss_pred             ---------CceEEE----------EEcc--ccc--------------CHHHHHHh--------c------CCCCC----
Confidence                     000100          0111  000              00000000        0      00000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                         +...+                  ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       106 ---~~~~~------------------~~~~~q---i~~al~~lH--~~~ivH~dikp~Nili~---~~~~~kl~dfg~~~  156 (288)
T cd07863         106 ---PAETI------------------KDLMRQ---FLRGLDFLH--ANCIVHRDLKPENILVT---SGGQVKLADFGLAR  156 (288)
T ss_pred             ---CHHHH------------------HHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCCEEECccCccc
Confidence               00000                  013344   677888888  99999999999999995   44569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......         .....+||+.|+|||++.+      ..|+.++||||+||++|+|++|.+||.+....+.      
T Consensus       157 ~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~------  215 (288)
T cd07863         157 IYSCQM---------ALTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ------  215 (288)
T ss_pred             cccCcc---------cCCCccccccccCchHhhC------CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH------
Confidence            543211         1234578999999999863      4688999999999999999999999976542110      


Q ss_pred             cchhhHHHHHHHHhc-------CCCC-----CC-------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        365 TCHACQEILFHSIQQ-------GHYD-----FP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~-------~~~~-----~p-------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                           ...+...+..       ....     +.       ...+..++.+++|||.+||++||++|||+.|++.||||
T Consensus       216 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         216 -----LGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             -----HHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                 0011111000       0000     00       01124578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2.5e-38  Score=323.71  Aligned_cols=252  Identities=27%  Similarity=0.421  Sum_probs=176.4

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      +.||+|+||.||+|++..+++.||+|++.+..   ......+.+|...+.+..+||||+++++++++....+   .|   
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~---lv---   74 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY---FV---   74 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEE---EE---
Confidence            36999999999999999999999999996432   1122345556555444457999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+....... |                   ...-
T Consensus        75 ---~e~~~-----------------~-~--------------~L~~~~~~~~~~~-~-------------------~~~~   99 (325)
T cd05602          75 ---LDYIN-----------------G-G--------------ELFYHLQRERCFL-E-------------------PRAR   99 (325)
T ss_pred             ---EeCCC-----------------C-C--------------cHHHHHHhcCCCC-H-------------------HHHH
Confidence               11110                 0 0              0000000000000 0                   0000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus       100 ---------------------~~~~q---i~~~L~~lH--~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~  150 (325)
T cd05602         100 ---------------------FYAAE---IASALGYLH--SLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHN  150 (325)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--HCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCC
Confidence                                 02233   667788888  99999999999999994   44569999999987432211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~---------------~  201 (325)
T cd05602         151 --------GTTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---------------T  201 (325)
T ss_pred             --------CCcccccCCccccCHHHHcC------CCCCCccccccccHHHHHHhcCCCCCCCCC---------------H
Confidence                    12346789999999999863      468899999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHH----HHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA----SVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~----e~l~Hpw~~~~~~  428 (539)
                      ..++..+......++    ..+++++++||.+||++||.+|+++.    ++++|+||....+
T Consensus       202 ~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         202 AEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             HHHHHHHHhCCcCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence            335566666655554    36899999999999999999999876    8999999976544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2e-38  Score=324.32  Aligned_cols=252  Identities=27%  Similarity=0.395  Sum_probs=177.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+|+.||||++.+..   ......+.+|+.++.+..+||||++++++++.....+   .|   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~---lv---   74 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLY---FV---   74 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEE---EE---
Confidence            36999999999999999999999999996431   1223455667665555457999999999987765433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+....-+. |                   ...-
T Consensus        75 ---~e~~~-----------------~-~--------------~L~~~l~~~~~~~-~-------------------~~~~   99 (325)
T cd05604          75 ---LDFVN-----------------G-G--------------ELFFHLQRERSFP-E-------------------PRAR   99 (325)
T ss_pred             ---EcCCC-----------------C-C--------------CHHHHHHHcCCCC-H-------------------HHHH
Confidence               11110                 0 0              0000000000000 0                   0000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus       100 ---------------------~~~~q---i~~al~~lH--~~givH~Dlkp~NIll~---~~~~~kL~DfG~~~~~~~~~  150 (325)
T cd05604         100 ---------------------FYAAE---IASALGYLH--SINIVYRDLKPENILLD---SQGHVVLTDFGLCKEGIAQS  150 (325)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--HCCeeecCCCHHHeEEC---CCCCEEEeecCCcccCCCCC
Confidence                                 02334   677788888  99999999999999994   44579999999986432111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~---------------~  201 (325)
T cd05604         151 --------DTTTTFCGTPEYLAPEVIRK------QPYDNTVDWWCLGAVLYEMLYGLPPFYCRD---------------V  201 (325)
T ss_pred             --------CCcccccCChhhCCHHHHcC------CCCCCcCccccccceehhhhcCCCCCCCCC---------------H
Confidence                    12246789999999999863      468899999999999999999999998653               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH----HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA----ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta----~e~l~Hpw~~~~~~  428 (539)
                      ..++..+..+...+++    .++.++.+||++||.+||.+||++    .++++||||....+
T Consensus       202 ~~~~~~~~~~~~~~~~----~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~  259 (325)
T cd05604         202 AEMYDNILHKPLVLRP----GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW  259 (325)
T ss_pred             HHHHHHHHcCCccCCC----CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence            3456666666665553    579999999999999999999986    58999999986543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.6e-38  Score=325.74  Aligned_cols=264  Identities=28%  Similarity=0.440  Sum_probs=180.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |.+ .+.||+|+||.||+|.+..+++.||||++++...   .....+.+|+.++..+ +||||+++++++++....+   
T Consensus         3 y~~-~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~---   77 (330)
T cd05601           3 FDV-KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLY---   77 (330)
T ss_pred             ceE-EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEE---
Confidence            454 4689999999999999999999999999975321   1234567788888775 6999999999887654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+...               ...++.   
T Consensus        78 lv------~e~~~-----------------~-~--------------~L~~~l~~~---------------~~~l~~---  101 (330)
T cd05601          78 LV------MEYQP-----------------G-G--------------DLLSLLNRY---------------EDQFDE---  101 (330)
T ss_pred             EE------ECCCC-----------------C-C--------------CHHHHHHHh---------------cCCCCH---
Confidence            11      11110                 0 0              000000000               000000   


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                          ..+                  ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       102 ----~~~------------------~~~~~q---i~~aL~~lH--~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a~~  151 (330)
T cd05601         102 ----DMA------------------QFYLAE---LVLAIHSVH--QMGYVHRDIKPENVLID---RTGHIKLADFGSAAR  151 (330)
T ss_pred             ----HHH------------------HHHHHH---HHHHHHHHH--HCCeEcccCchHheEEC---CCCCEEeccCCCCeE
Confidence                000                  002333   667778888  99999999999999994   456799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .......       .....+||+.|+|||++..........|+.++|||||||++|+|++|..||.+.+.          
T Consensus       152 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----------  214 (330)
T cd05601         152 LTANKMV-------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS----------  214 (330)
T ss_pred             CCCCCce-------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH----------
Confidence            4322210       12345899999999998642211134688999999999999999999999976531          


Q ss_pred             chhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                           ...+..|....  ..+|.  ...+++++++||++||. ||.+|+|++++++||||....+
T Consensus       215 -----~~~~~~i~~~~~~~~~~~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~  271 (330)
T cd05601         215 -----AKTYNNIMNFQRFLKFPE--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW  271 (330)
T ss_pred             -----HHHHHHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence                 22445554432  34443  24689999999999998 9999999999999999987554

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-38  Score=326.06  Aligned_cols=264  Identities=28%  Similarity=0.469  Sum_probs=183.3

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |.+ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|++++..+ +||||++++++++++...+   
T Consensus         3 y~~-~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---   77 (350)
T cd05573           3 FEV-IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLY---   77 (350)
T ss_pred             ceE-EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEE---
Confidence            554 468999999999999999999999999996532   12345677899999887 5999999999887665433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.....+..+..                
T Consensus        78 lv------~e~~~-----------------~-~--------------~L~~~l~~~~~l~~~~~----------------  103 (350)
T cd05573          78 LV------MEYMP-----------------G-G--------------DLMNLLIRKDVFPEETA----------------  103 (350)
T ss_pred             EE------EcCCC-----------------C-C--------------CHHHHHHHcCCCCHHHH----------------
Confidence            11      11110                 0 0              00000000000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                          .                     .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       104 ----~---------------------~i~~q---i~~aL~~LH--~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~~~  150 (350)
T cd05573         104 ----R---------------------FYIAE---LVLALDSVH--KLGFIHRDIKPDNILID---ADGHIKLADFGLCKK  150 (350)
T ss_pred             ----H---------------------HHHHH---HHHHHHHHH--HCCeeccCCCHHHeEEC---CCCCEEeecCCCCcc
Confidence                0                     02333   677888888  89999999999999994   446699999999875


Q ss_pred             cccCCCCC---------------------CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHH
Q psy16343        286 IKFNTSVH---------------------SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL  344 (539)
Q Consensus       286 ~~~~~~~~---------------------~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll  344 (539)
                      ........                     ...........+||+.|+|||++..      ..|+.++|||||||++|+|+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell  224 (350)
T cd05573         151 MNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG------TPYGLECDWWSLGVILYEML  224 (350)
T ss_pred             CcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC------CCCCCceeeEecchhhhhhc
Confidence            44322000                     0000012345689999999999863      46899999999999999999


Q ss_pred             hCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhc--CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-HHHHhcCC
Q psy16343        345 CGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ--GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-AASVLKHP  421 (539)
Q Consensus       345 ~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-a~e~l~Hp  421 (539)
                      +|.+||.+.+               .......+..  ..+.+|..  ..+++++++||.+||. ||.+|++ ++++++||
T Consensus       225 ~g~~Pf~~~~---------------~~~~~~~i~~~~~~~~~p~~--~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp  286 (350)
T cd05573         225 YGFPPFYSDT---------------LQETYNKIINWKESLRFPPD--PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP  286 (350)
T ss_pred             cCCCCCCCCC---------------HHHHHHHHhccCCcccCCCC--CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence            9999998753               1234455555  34445542  3479999999999997 9999999 99999999


Q ss_pred             CccCCCC
Q psy16343        422 WISTAGT  428 (539)
Q Consensus       422 w~~~~~~  428 (539)
                      ||....+
T Consensus       287 ~~~~~~~  293 (350)
T cd05573         287 FFKGIDW  293 (350)
T ss_pred             CcCCCCH
Confidence            9987655

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.4e-38  Score=322.44  Aligned_cols=279  Identities=26%  Similarity=0.321  Sum_probs=178.4

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|.+ .+.||+|+||.||+|.+..++..||||++.+...  .....+.+|++++..+ +||||++++++|.......
T Consensus        13 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07878          13 VPERYQN-LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIE   90 (343)
T ss_pred             hhhhhhh-heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhccccccc
Confidence            3456765 5789999999999999999999999999865321  2234577899999987 5999999999886443211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ..         .+..+           +.++. + +              .+......                 ...+.
T Consensus        91 ~~---------~~~~~-----------~~~~~-~-~--------------~l~~~~~~-----------------~~l~~  117 (343)
T cd07878          91 NF---------NEVYL-----------VTNLM-G-A--------------DLNNIVKC-----------------QKLSD  117 (343)
T ss_pred             cc---------CcEEE-----------EeecC-C-C--------------CHHHHHhc-----------------CCCCH
Confidence            00         00011           11110 0 0              00000000                 00000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       ..+                        ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       118 -~~~------------------------~~i~~q---i~~aL~~LH--~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~  164 (343)
T cd07878         118 -EHV------------------------QFLIYQ---LLRGLKYIH--SAGIIHRDLKPSNVAVN---EDCELRILDFGL  164 (343)
T ss_pred             -HHH------------------------HHHHHH---HHHHHHHHH--HCCeecccCChhhEEEC---CCCCEEEcCCcc
Confidence             000                        013334   677888888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.....           ..+.+||+.|+|||++.+     ...|+.++|||||||++|+|++|++||.+.+..+.....
T Consensus       165 ~~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  228 (343)
T cd07878         165 ARQADDE-----------MTGYVATRWYRAPEIMLN-----WMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRI  228 (343)
T ss_pred             ceecCCC-----------cCCccccccccCchHhcC-----CccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            8754321           235689999999999863     245889999999999999999999999865421100000


Q ss_pred             CccchhhHHHHHHHHh--------cCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILFHSIQ--------QGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~--------~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .+............+.        .....++..    .+...++.++|||.+||+.||.+|||+.|+|.||||....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         229 MEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             HHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence            0000000000111110        001111111    1235678899999999999999999999999999998654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=5.7e-38  Score=320.36  Aligned_cols=251  Identities=27%  Similarity=0.399  Sum_probs=176.8

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|++..+++.||+|++.+..   ......+.+|+..+.+..+||||+++++++++....+   .|   
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~---lv---   74 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLY---FV---   74 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEE---EE---
Confidence            36999999999999999999999999996532   1223445666655444457999999999887665433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...           +..     ....    ..+..-
T Consensus        75 ---~e~~~-----------------~-~--------------~L~~~-----------l~~-----~~~~----~~~~~~   99 (321)
T cd05603          75 ---LDYVN-----------------G-G--------------ELFFH-----------LQR-----ERCF----LEPRAR   99 (321)
T ss_pred             ---EcCCC-----------------C-C--------------CHHHH-----------HHH-----cCCC----CHHHHH
Confidence               11110                 0 0              00000           000     0000    000000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus       100 ---------------------~~~~q---i~~~L~~lH--~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~  150 (321)
T cd05603         100 ---------------------FYAAE---VASAIGYLH--SLNIIYRDLKPENILLD---SQGHVVLTDFGLCKEGVEPE  150 (321)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--HCCeEeccCCHHHeEEC---CCCCEEEccCCCCccCCCCC
Confidence                                 02334   677888888  99999999999999994   44569999999987422111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ......+||+.|+|||++..      ..|+.++|+|||||++|+|++|.+||.+.+               .
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~---------------~  201 (321)
T cd05603         151 --------ETTSTFCGTPEYLAPEVLRK------EPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---------------V  201 (321)
T ss_pred             --------CccccccCCcccCCHHHhcC------CCCCCcCcccccchhhhhhhcCCCCCCCCC---------------H
Confidence                    12235689999999999863      468899999999999999999999998753               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH----HHHhcCCCccCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA----ASVLKHPWISTAG  427 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta----~e~l~Hpw~~~~~  427 (539)
                      ..++..+..+...+|.    ..+.++.+||.+||.+||.+|+++    .++++||||....
T Consensus       202 ~~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~  258 (321)
T cd05603         202 SQMYDNILHKPLQLPG----GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPIN  258 (321)
T ss_pred             HHHHHHHhcCCCCCCC----CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCC
Confidence            3456677777776664    478999999999999999999976    4999999997644

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=8e-38  Score=320.24  Aligned_cols=259  Identities=23%  Similarity=0.351  Sum_probs=182.7

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|.+..+++.||||++.+...   .....+.+|+.++.++.+||||+++++++++....+   .|   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~---lv---   74 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLF---LV---   74 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEE---EE---
Confidence            369999999999999999999999999975321   223456789999988878999999999987665433   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.+-                 + +              .+...+....-+ +|.                   .. 
T Consensus        75 ---~e~~~-----------------~-~--------------~L~~~~~~~~~l-~~~-------------------~~-   98 (327)
T cd05617          75 ---IEYVN-----------------G-G--------------DLMFHMQRQRKL-PEE-------------------HA-   98 (327)
T ss_pred             ---EeCCC-----------------C-C--------------cHHHHHHHcCCC-CHH-------------------HH-
Confidence               11110                 0 0              000000000000 000                   00 


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus        99 --------------------~~~~~q---i~~al~~lH--~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~  150 (327)
T cd05617          99 --------------------RFYAAE---ICIALNFLH--ERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPG  150 (327)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCeeccCCCHHHEEEe---CCCCEEEeccccceeccCCC
Confidence                                003334   667788888  99999999999999994   44569999999986422111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||........        ....
T Consensus       151 --------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~--------~~~~  208 (327)
T cd05617         151 --------DTTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD--------MNTE  208 (327)
T ss_pred             --------CceecccCCcccCCHHHHCC------CCCCchheeehhHHHHHHHHhCCCCCCccCCCcc--------cccH
Confidence                    12346789999999999863      4688999999999999999999999975332110        0113


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH------HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta------~e~l~Hpw~~~~~~  428 (539)
                      +.++..+....+.+|.    .++.++++||++||.+||++|+++      ++++.||||....+
T Consensus       209 ~~~~~~~~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~  268 (327)
T cd05617         209 DYLFQVILEKPIRIPR----FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDW  268 (327)
T ss_pred             HHHHHHHHhCCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence            3456666666667764    589999999999999999999984      69999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.5e-37  Score=322.38  Aligned_cols=277  Identities=24%  Similarity=0.349  Sum_probs=177.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+|..||||++.+..  ......+.+|+.++..+ +||||++++++|.......
T Consensus        19 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          19 VLKRYQQ-LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhhceEE-EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCcc
Confidence            4456765 578999999999999999999999999996432  22345677899999886 6999999999886543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .          ..++.          -+.+|. . +              .+...+           .       ...+.
T Consensus        97 ~----------~~~~~----------lv~e~~-~-~--------------~l~~~~-----------~-------~~~~~  122 (359)
T cd07876          97 E----------FQDVY----------LVMELM-D-A--------------NLCQVI-----------H-------MELDH  122 (359)
T ss_pred             c----------cceeE----------EEEeCC-C-c--------------CHHHHH-----------h-------ccCCH
Confidence            0          00000          011110 0 0              000000           0       00000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       ..++   .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       123 -~~~~---~---------------------~~~q---i~~~L~~LH--~~~ivHrDlkp~NIl~~---~~~~~kl~Dfg~  169 (359)
T cd07876         123 -ERMS---Y---------------------LLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVK---SDCTLKILDFGL  169 (359)
T ss_pred             -HHHH---H---------------------HHHH---HHHHHHHHH--hCCcccCCCCHHHEEEC---CCCCEEEecCCC
Confidence             0000   0                     2333   677888888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+.....
T Consensus       170 a~~~~~~~---------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~  234 (359)
T cd07876         170 ARTACTNF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV  234 (359)
T ss_pred             ccccccCc---------cCCCCcccCCCCCchhccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            87432211         1235689999999999863      46889999999999999999999999876432110000


Q ss_pred             CccchhhHHHH-------HHHHhcCCCCCCC----------------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEIL-------FHSIQQGHYDFPE----------------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~-------~~~i~~~~~~~p~----------------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+....+....       ..........++.                ......++++++||.+||+.||++|||++|+|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         235 IEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            00000000000       0111111111111                011234688999999999999999999999999


Q ss_pred             CCCccC
Q psy16343        420 HPWIST  425 (539)
Q Consensus       420 Hpw~~~  425 (539)
                      ||||..
T Consensus       315 hp~~~~  320 (359)
T cd07876         315 HPYITV  320 (359)
T ss_pred             Cchhhh
Confidence            999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.2e-37  Score=318.30  Aligned_cols=253  Identities=25%  Similarity=0.398  Sum_probs=181.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .++||+|+||.||+|.++.+++.||||++.+..   ......+..|+.++..+.+|++|+++++++++....+   .|  
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~---lv--   79 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLY---FV--   79 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEE---EE--
Confidence            367999999999999999999999999996531   1223456778888887766788999999887765433   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 + +              .+...+....-+..+.                     
T Consensus        80 ----~Ey~~-----------------~-g--------------~L~~~i~~~~~l~~~~---------------------  102 (323)
T cd05615          80 ----MEYVN-----------------G-G--------------DLMYHIQQVGKFKEPQ---------------------  102 (323)
T ss_pred             ----EcCCC-----------------C-C--------------cHHHHHHHcCCCCHHH---------------------
Confidence                11110                 0 0              0000000000000000                     


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                          ...+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.....
T Consensus       103 --------------------~~~i~~q---i~~al~~lH--~~~ivHrDikp~Nill~---~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615         103 --------------------AVFYAAE---ISVGLFFLH--RRGIIYRDLKLDNVMLD---SEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             --------------------HHHHHHH---HHHHHHHHH--HCCeeccCCCHHHeEEC---CCCCEEEeccccccccCCC
Confidence                                0002333   667778888  99999999999999995   4456999999998753221


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..        ...+.+||+.|+|||++.+      ..|+.++|+||+||++|+|++|.+||.+.+               
T Consensus       155 ~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~---------------  205 (323)
T cd05615         155 GV--------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAYGVLLYEMLAGQPPFDGED---------------  205 (323)
T ss_pred             Cc--------cccCccCCccccCHHHHcC------CCCCCccchhhhHHHHHHHHhCCCCCCCCC---------------
Confidence            11        1235689999999999863      468899999999999999999999998753               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                      ...+...|....+.+|.    .++.++++||.+||.+||.+|++     .+++++||||....+
T Consensus       206 ~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         206 EDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             HHHHHHHHHhCCCCCCc----cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence            23456677777777764    58999999999999999999997     478999999987654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=8.7e-38  Score=325.67  Aligned_cols=275  Identities=25%  Similarity=0.289  Sum_probs=177.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|.+..+++.||||++.+...  ....++.+|++++..+ +||||+++++++........       
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~-------   76 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPF-------   76 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCcccc-------
Confidence            5789999999999999999999999999864321  2335678999999987 59999999999876542110       


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                          ..+.+          +.++- . .              .+...+.....+..+.+                     
T Consensus        77 ----~~~~l----------v~e~~-~-~--------------~l~~~~~~~~~l~~~~~---------------------  105 (372)
T cd07853          77 ----EEIYV----------VTELM-Q-S--------------DLHKIIVSPQPLSSDHV---------------------  105 (372)
T ss_pred             ----ceEEE----------Eeecc-c-c--------------CHHHHHhcCCCCCHHHH---------------------
Confidence                00000          11110 0 0              00000000000000000                     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++......
T Consensus       106 --------------------~~~~~q---i~~aL~~LH--~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~a~~~~~~~  157 (372)
T cd07853         106 --------------------KVFLYQ---ILRGLKYLH--SAGILHRDIKPGNLLVN---SNCVLKICDFGLARVEEPDE  157 (372)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--hCCeeCCCCChHHEEEC---CCCCEEeccccceeecccCc
Confidence                                013334   677888888  99999999999999994   44679999999987543221


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh-
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC-  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~-  369 (539)
                      .       ......+||+.|+|||++.+     ...|+.++||||+||++|+|++|++||.+.+..++.-......... 
T Consensus       158 ~-------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~  225 (372)
T cd07853         158 S-------KHMTQEVVTQYYRAPEILMG-----SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS  225 (372)
T ss_pred             c-------ccCCCCCcCCCcCCHHHHcC-----CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            1       11234578999999999863     2458889999999999999999999998765322100000000000 


Q ss_pred             H-------HHHHHHHhcCCCCCCC-----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        370 Q-------EILFHSIQQGHYDFPE-----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       370 ~-------~~~~~~i~~~~~~~p~-----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .       ......+.......+.     ......++++++||.+||+.||.+|||++|+|+||||...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         226 LEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            0       0011112222221111     1123468999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.4e-37  Score=323.82  Aligned_cols=265  Identities=25%  Similarity=0.413  Sum_probs=180.5

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||+|++.+...   .....+.+|+.++..+ +||||+++++++.++...+ 
T Consensus        43 ~~y~i-~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~-  119 (371)
T cd05622          43 EDYEV-VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLY-  119 (371)
T ss_pred             hhcEE-EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEE-
Confidence            45665 4789999999999999999999999999964221   1223466788888875 6999999999987654433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+...  .-||.               
T Consensus       120 --lv------~Ey~~-----------------g-g--------------~L~~~~~~~--~~~~~---------------  142 (371)
T cd05622         120 --MV------MEYMP-----------------G-G--------------DLVNLMSNY--DVPEK---------------  142 (371)
T ss_pred             --EE------EcCCC-----------------C-C--------------cHHHHHHhc--CCCHH---------------
Confidence              11      11110                 0 0              000000000  00000               


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                         |.                      ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       143 ---~~----------------------~~~~~q---i~~aL~~LH--~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a  189 (371)
T cd05622         143 ---WA----------------------RFYTAE---VVLALDAIH--SMGFIHRDVKPDNMLLD---KSGHLKLADFGTC  189 (371)
T ss_pred             ---HH----------------------HHHHHH---HHHHHHHHH--HCCEEeCCCCHHHEEEC---CCCCEEEEeCCce
Confidence               00                      002233   667788888  99999999999999994   4467999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........       ....+.+||+.|||||++....  ....|+.++|||||||++|+|++|.+||.+.+         
T Consensus       190 ~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~--~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---------  251 (371)
T cd05622         190 MKMNKEGM-------VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---------  251 (371)
T ss_pred             eEcCcCCc-------ccccCcccCccccCHHHHhccC--CCccCCCccceeehhHHHHHHHhCCCCCCCCC---------
Confidence            75432211       1123678999999999986421  11238899999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~  428 (539)
                            ....+..|......++...+..++.++++||.+||..++.+  |++++|+++||||.+..+
T Consensus       252 ------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~  312 (371)
T cd05622         252 ------LVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  312 (371)
T ss_pred             ------HHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence                  23355666654432222234578999999999999844443  779999999999987543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.4e-37  Score=315.65  Aligned_cols=276  Identities=25%  Similarity=0.344  Sum_probs=178.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|.+ .+.||+|+||.||+|++..++..||+|.++.... .....+.+|++++.++ +||||+++++++..+...+   
T Consensus         6 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---   80 (309)
T cd07872           6 ETYIK-LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLT---   80 (309)
T ss_pred             CceEE-EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEE---
Confidence            34554 5689999999999999999999999999864322 2234577899999987 5999999999987654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      .|.+-                 .                .+...           +..     ...      
T Consensus        81 lv------~e~~~-----------------~----------------~l~~~-----------~~~-----~~~------   99 (309)
T cd07872          81 LV------FEYLD-----------------K----------------DLKQY-----------MDD-----CGN------   99 (309)
T ss_pred             EE------EeCCC-----------------C----------------CHHHH-----------HHh-----cCC------
Confidence            11      11000                 0                00000           000     000      


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ..+...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       100 ~~~~~~~~------------------~~~~q---i~~aL~~lH--~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~  153 (309)
T cd07872         100 IMSMHNVK------------------IFLYQ---ILRGLAYCH--RRKVLHRDLKPQNLLIN---ERGELKLADFGLARA  153 (309)
T ss_pred             CCCHHHHH------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCCEEECcccccee
Confidence            00000000                  02233   667788888  99999999999999995   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+||+.|+|||++.+     ...|+.++|+||+||++|+|++|++||.+.+..+........
T Consensus       154 ~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~  220 (309)
T cd07872         154 KSVPTK--------TYSNEVVTLWYRPPDVLLG-----SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRL  220 (309)
T ss_pred             cCCCcc--------ccccccccccccCCHHHhC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            332211        1234578999999999863     245888999999999999999999999876432210000000


Q ss_pred             chhhHHHHHHHHhc----CCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        366 CHACQEILFHSIQQ----GHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       366 ~~~~~~~~~~~i~~----~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ...+....+..+..    ..+.++.       .....++++++|||.+||..||.+|+|++|+|+||||....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         221 LGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            00000001111110    0111221       11235789999999999999999999999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=8.3e-37  Score=317.35  Aligned_cols=277  Identities=25%  Similarity=0.375  Sum_probs=176.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.|++ .+.||+|+||.||+|.+..+++.||||++.+..  ......+.+|+.+++.+ +||||+++++++.......
T Consensus        22 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          22 VLKRYQN-LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             hhcceeE-EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-CCCCccccceeeccccccc
Confidence            3456765 478999999999999999999999999996532  22345678899999886 6999999998876543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ..          .++.          -+.++.-+ .               +..      +     +.       ...  
T Consensus       100 ~~----------~~~~----------lv~e~~~~-~---------------l~~------~-----~~-------~~~--  123 (364)
T cd07875         100 EF----------QDVY----------IVMELMDA-N---------------LCQ------V-----IQ-------MEL--  123 (364)
T ss_pred             cc----------CeEE----------EEEeCCCC-C---------------HHH------H-----HH-------hcC--
Confidence            00          0011          11111000 0               000      0     00       000  


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        +   ...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       124 --~---~~~~~------------------~~~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~  172 (364)
T cd07875         124 --D---HERMS------------------YLLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVK---SDCTLKILDFGL  172 (364)
T ss_pred             --C---HHHHH------------------HHHHH---HHHHHHHHh--hCCeecCCCCHHHEEEC---CCCcEEEEeCCC
Confidence              0   00000                  02333   667888888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+.....
T Consensus       173 a~~~~~~~---------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~  237 (364)
T cd07875         173 ARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV  237 (364)
T ss_pred             ccccCCCC---------cccCCcccCCcCCHHHHhC------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            87542211         1235689999999999863      46889999999999999999999999876422110000


Q ss_pred             ----CccchhhHHHH---HHHHhcCCCC--------------CC--CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 ----GETCHACQEIL---FHSIQQGHYD--------------FP--EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ----~~~~~~~~~~~---~~~i~~~~~~--------------~p--~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          +..+......+   ..........              ++  ...+...+.+++|||.+||+.||.+|||++|+|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         238 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                00000000000   0000000110              01  1112234678999999999999999999999999


Q ss_pred             CCCccC
Q psy16343        420 HPWIST  425 (539)
Q Consensus       420 Hpw~~~  425 (539)
                      ||||..
T Consensus       318 hp~~~~  323 (364)
T cd07875         318 HPYINV  323 (364)
T ss_pred             Cccccc
Confidence            999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=3.9e-37  Score=318.46  Aligned_cols=255  Identities=27%  Similarity=0.365  Sum_probs=174.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||.||+|.+..+++.||||++.+... .....+.+|++++..+ +|+||+++++++++....+   .|    
T Consensus        79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv----  150 (353)
T PLN00034         79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQ---VL----  150 (353)
T ss_pred             hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEE---EE----
Confidence            4679999999999999999999999999854322 2245688999999987 5999999999987654433   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                        .|.+-                 + +              .+....     ..+|                ..++   -
T Consensus       151 --~e~~~-----------------~-~--------------~L~~~~-----~~~~----------------~~~~---~  172 (353)
T PLN00034        151 --LEFMD-----------------G-G--------------SLEGTH-----IADE----------------QFLA---D  172 (353)
T ss_pred             --EecCC-----------------C-C--------------cccccc-----cCCH----------------HHHH---H
Confidence              11110                 0 0              000000     0000                0000   0


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                           +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.+.....
T Consensus       173 ---------------------i~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~~~~~~~  223 (353)
T PLN00034        173 ---------------------VARQ---ILSGIAYLH--RRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRILAQTMD  223 (353)
T ss_pred             ---------------------HHHH---HHHHHHHHH--HCCEeecCCCHHHEEEc---CCCCEEEcccccceecccccc
Confidence                                 2333   667788888  99999999999999995   445699999999875432111


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              ...+.+||+.|+|||++..... ....++.++|||||||++|+|++|+.||......+            ..
T Consensus       224 --------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~------------~~  282 (353)
T PLN00034        224 --------PCNSSVGTIAYMSPERINTDLN-HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD------------WA  282 (353)
T ss_pred             --------cccccccCccccCccccccccc-cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc------------HH
Confidence                    1235689999999999853110 11234568999999999999999999997432211            11


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .+...+....   +......++.++++||.+||..||++|||++|+|+||||...
T Consensus       283 ~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        283 SLMCAICMSQ---PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             HHHHHHhccC---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence            2222232221   111224689999999999999999999999999999999865

>KOG0577|consensus

Probab=100.00  E-value=6.2e-38  Score=319.35  Aligned_cols=250  Identities=26%  Similarity=0.371  Sum_probs=187.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ..||.|+||.||-|++..+.+.||||.+.-....   .-.++++||..|.++ .|||+|.+.++|-.+...+   .|   
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaW---LV---  104 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAW---LV---  104 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHH---HH---
Confidence            3489999999999999999999999999643222   234688999999997 5999999998886554333   23   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         +|.|+                 |+.-             .++.+...          .+.+         +.     
T Consensus       105 ---MEYCl-----------------GSAs-------------DlleVhkK----------plqE---------vE-----  127 (948)
T KOG0577|consen  105 ---MEYCL-----------------GSAS-------------DLLEVHKK----------PLQE---------VE-----  127 (948)
T ss_pred             ---HHHHh-----------------ccHH-------------HHHHHHhc----------cchH---------HH-----
Confidence               55544                 2110             00000000          0000         00     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                        +..                 +..+   .+.+++|+|  +.+.||||||.-|||+++   .+.|||+|||-|.....  
T Consensus       128 --IAA-----------------i~~g---aL~gLaYLH--S~~~IHRDiKAGNILLse---~g~VKLaDFGSAsi~~P--  178 (948)
T KOG0577|consen  128 --IAA-----------------ITHG---ALQGLAYLH--SHNRIHRDIKAGNILLSE---PGLVKLADFGSASIMAP--  178 (948)
T ss_pred             --HHH-----------------HHHH---HHHHHHHHH--HhhHHhhhccccceEecC---CCeeeeccccchhhcCc--
Confidence              001                 1111   457889999  778999999999999954   45699999998764322  


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                                ..+|+|||+|||||||....   ...|+.++||||||++..+|...+||+...+.              .
T Consensus       179 ----------AnsFvGTPywMAPEVILAMD---EGqYdgkvDvWSLGITCIELAERkPPlFnMNA--------------M  231 (948)
T KOG0577|consen  179 ----------ANSFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------------M  231 (948)
T ss_pred             ----------hhcccCCccccchhHheecc---ccccCCccceeeccchhhhhhhcCCCccCchH--------------H
Confidence                      34799999999999998642   23699999999999999999999999876532              3


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ..+++..++..+.++.++|   |+.++.||..||++-|..|||++++|+|+|+...
T Consensus       232 SALYHIAQNesPtLqs~eW---S~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  232 SALYHIAQNESPTLQSNEW---SDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             HHHHHHHhcCCCCCCCchh---HHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence            4578877888888888777   8899999999999999999999999999999754

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.3e-37  Score=317.36  Aligned_cols=250  Identities=30%  Similarity=0.459  Sum_probs=179.2

Q ss_pred             ceeceeCceEEEEEEEc---cCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         54 EILGKGAYASVQTCVNI---LTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      +.||+|+||.||++++.   .+|+.||+|++.+..  .....+..+|++++.++ +||||++++++++++...+   .| 
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~---lv-   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLY---LI-   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEE---EE-
Confidence            47999999999998763   578999999996532  12234567899999987 5999999999987654333   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           .|.+-                 + +              .+...+.....+..+                 ++  
T Consensus        77 -----~e~~~-----------------~-~--------------~L~~~l~~~~~l~~~-----------------~~--  100 (318)
T cd05582          77 -----LDFLR-----------------G-G--------------DLFTRLSKEVMFTEE-----------------DV--  100 (318)
T ss_pred             -----EcCCC-----------------C-C--------------cHHHHHHHcCCCCHH-----------------HH--
Confidence                 11110                 0 0              000000000000000                 00  


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                            ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.....
T Consensus       101 ----------------------~~~~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~~~~  150 (318)
T cd05582         101 ----------------------KFYLAE---LALALDHLH--SLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESID  150 (318)
T ss_pred             ----------------------HHHHHH---HHHHHHHHH--HCCEecCCCCHHHeEEC---CCCcEEEeeccCCcccCC
Confidence                                  013344   677888888  99999999999999994   445699999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ..        ....+.+||+.|+|||++..      ..|+.++|+|||||++|+|++|+.||.+.+              
T Consensus       151 ~~--------~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~--------------  202 (318)
T cd05582         151 HE--------KKAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQGKD--------------  202 (318)
T ss_pred             CC--------CceecccCChhhcCHHHHcC------CCCCCccceeccceEeeeeccCCCCCCCCC--------------
Confidence            21        12345789999999999863      468889999999999999999999997653              


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCC
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAG  427 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~  427 (539)
                       .......+....+.+|.    .+++++++||++||++||.+||+     +++++.||||....
T Consensus       203 -~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~  261 (318)
T cd05582         203 -RKETMTMILKAKLGMPQ----FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTID  261 (318)
T ss_pred             -HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence             23355667777777764    58999999999999999999999     67799999998653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2.1e-37  Score=320.62  Aligned_cols=278  Identities=23%  Similarity=0.346  Sum_probs=176.4

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.+...  .....+.+|+.+++.+ +||||++++++|.......
T Consensus        15 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          15 VLKRYQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhhceeE-EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-CCCchhceeeeeecccccc
Confidence            4456665 4689999999999999999999999999965322  2235677899999886 6999999999886543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .          ..++.+          +.++  ..+              .+..      +     +.       ..   
T Consensus        93 ~----------~~~~~l----------v~e~--~~~--------------~l~~------~-----~~-------~~---  115 (355)
T cd07874          93 E----------FQDVYL----------VMEL--MDA--------------NLCQ------V-----IQ-------ME---  115 (355)
T ss_pred             c----------cceeEE----------Ehhh--hcc--------------cHHH------H-----Hh-------hc---
Confidence            0          000000          0010  000              0000      0     00       00   


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       .+.-.+-                     .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       116 -l~~~~~~---------------------~~~~q---i~~aL~~LH--~~givHrDikp~Nill~---~~~~~kl~Dfg~  165 (355)
T cd07874         116 -LDHERMS---------------------YLLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVK---SDCTLKILDFGL  165 (355)
T ss_pred             -CCHHHHH---------------------HHHHH---HHHHHHHHH--hCCcccCCCChHHEEEC---CCCCEEEeeCcc
Confidence             0000000                     02334   667888888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         .....+||+.|+|||++.+      ..|+.++|+|||||++|+|++|+.||.+.+..+.....
T Consensus       166 ~~~~~~~~---------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  230 (355)
T cd07874         166 ARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV  230 (355)
T ss_pred             cccCCCcc---------ccCCccccCCccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            87543211         1235689999999999863      46899999999999999999999999875422100000


Q ss_pred             ----CccchhhHHH---HHHHHhcCC-----CCCC-----------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 ----GETCHACQEI---LFHSIQQGH-----YDFP-----------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ----~~~~~~~~~~---~~~~i~~~~-----~~~p-----------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          +..+......   ....+....     ..++           .......+.++++||.+||..||++|||++|+|+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             HHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence                0000000000   000110000     0111           1112235678999999999999999999999999


Q ss_pred             CCCccCC
Q psy16343        420 HPWISTA  426 (539)
Q Consensus       420 Hpw~~~~  426 (539)
                      ||||...
T Consensus       311 hp~~~~~  317 (355)
T cd07874         311 HPYINVW  317 (355)
T ss_pred             Ccchhcc
Confidence            9999743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=4.9e-37  Score=307.31  Aligned_cols=257  Identities=25%  Similarity=0.343  Sum_probs=176.2

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||+||+|.+..+++.||||.+.+....   ....+..|++++..+ +||||+++++++......+   .|     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~---lv-----   71 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLC---LV-----   71 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEE---EE-----
Confidence            69999999999999999999999998643221   124567899999886 6999999999887654332   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|.+-                 +..+..           .+.........+ +|..                       
T Consensus        72 -~e~~~-----------------~g~L~~-----------~~~~~~~~~~~l-~~~~-----------------------   98 (280)
T cd05608          72 -MTIMN-----------------GGDLRY-----------HIYNVDEENPGF-PEPR-----------------------   98 (280)
T ss_pred             -EeCCC-----------------CCCHHH-----------HHHhccccCCCC-CHHH-----------------------
Confidence             11110                 000000           000000000000 0000                       


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                       ...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..+..... 
T Consensus        99 -----------------~~~~~~q---i~~~l~~lH--~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~-  152 (280)
T cd05608          99 -----------------ACFYTAQ---IISGLEHLH--QRRIIYRDLKPENVLLD---NDGNVRISDLGLAVELKDGQS-  152 (280)
T ss_pred             -----------------HHHHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEEeeCccceecCCCCc-
Confidence                             0013334   677788888  99999999999999994   445699999999875432211 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             ...+..||+.|+|||++.+      ..|+.++|+||+||++|+|++|+.||.......           ....
T Consensus       153 -------~~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-----------~~~~  208 (280)
T cd05608         153 -------KTKGYAGTPGFMAPELLQG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-----------ENKE  208 (280)
T ss_pred             -------cccccCCCcCccCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-----------hHHH
Confidence                   1235689999999999863      468899999999999999999999997643211           0122


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      ....+..+...+|    ..+++++++||.+||..||++|+     +++++++||||....+
T Consensus       209 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~  265 (280)
T cd05608         209 LKQRILNDSVTYP----DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNW  265 (280)
T ss_pred             HHHhhcccCCCCc----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCH
Confidence            3344444444444    36899999999999999999999     8899999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=6.8e-37  Score=311.27  Aligned_cols=283  Identities=23%  Similarity=0.292  Sum_probs=170.2

Q ss_pred             hcccCceeceeCceEEEEEEEcc--CCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNIL--TELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~--t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |+..+..||+|+||.||+|....  ++..||+|.+.+..  ....+.+|++++..+ +||||+++++++.......   .
T Consensus         2 ~~~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~---~   75 (317)
T cd07867           2 FEYEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLREL-KHPNVIALQKVFLSHSDRK---V   75 (317)
T ss_pred             cceeceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCe---E
Confidence            34446789999999999999754  56789999986532  234577899999987 5999999999875432111   0


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                                ++           +.++.-+ .               +...+....   ......    ...... ...+
T Consensus        76 ----------~l-----------v~e~~~~-~---------------l~~~~~~~~---~~~~~~----~~~~l~-~~~~  110 (317)
T cd07867          76 ----------WL-----------LFDYAEH-D---------------LWHIIKFHR---ASKANK----KPMQLP-RSMV  110 (317)
T ss_pred             ----------EE-----------EEeeeCC-c---------------HHHHHHhhh---ccccCC----CCccCC-HHHH
Confidence                      00           1111000 0               000000000   000000    000000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC-CCCCCceeccCCCccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP-DQLSPVKLCDFDLGSG  285 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~-~~~~~ikl~DFGla~~  285 (539)
                      +.                        +..|   ++.++.|+|  ++||+||||||+|||+..+ +..+.+||+|||+++.
T Consensus       111 ~~------------------------i~~q---i~~aL~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867         111 KS------------------------LLYQ---ILDGIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             HH------------------------HHHH---HHHHHHHHH--hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            00                        2334   667788888  9999999999999999543 2346799999999975


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .......     .......+||+.|+|||++.+     ...|+.++||||+||++|+|++|.+||.............. 
T Consensus       162 ~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~-  230 (317)
T cd07867         162 FNSPLKP-----LADLDPVVVTFWYRAPELLLG-----ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFH-  230 (317)
T ss_pred             cCCCccc-----ccccCcceecccccCcHHhcC-----CCccCcHHHHHhHHHHHHHHHhCCCCccccccccccccccc-
Confidence            4322110     012235689999999999863     24588999999999999999999999976532210000000 


Q ss_pred             chhhHHH-----------HHHHHh-------------cCCCC------CCCCCCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        366 CHACQEI-----------LFHSIQ-------------QGHYD------FPEGEWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       366 ~~~~~~~-----------~~~~i~-------------~~~~~------~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                       ......           .+..+.             ...+.      ..+......+..+++||.+||+.||.+|||++
T Consensus       231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~  309 (317)
T cd07867         231 -HDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSE  309 (317)
T ss_pred             -HHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHH
Confidence             000000           000000             00000      00000113467899999999999999999999


Q ss_pred             HHhcCCCc
Q psy16343        416 SVLKHPWI  423 (539)
Q Consensus       416 e~l~Hpw~  423 (539)
                      |+|+||||
T Consensus       310 e~l~hp~f  317 (317)
T cd07867         310 QALQDPYF  317 (317)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-37  Score=314.71  Aligned_cols=266  Identities=28%  Similarity=0.433  Sum_probs=179.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||+|++..+++.||||++.+..   ......+.+|+.++..+ +||||++++++|+++...+  
T Consensus         2 ~y~~-~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~--   77 (331)
T cd05597           2 DFEI-LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLY--   77 (331)
T ss_pred             CceE-EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEE--
Confidence            3554 478999999999999999999999999996421   12234567788888775 6999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+......-+|..               
T Consensus        78 -lv------~e~~~-----------------g-~--------------~L~~~l~~~~~~~~~~~---------------  103 (331)
T cd05597          78 -LV------MDYYV-----------------G-G--------------DLLTLLSKFEDRLPEDM---------------  103 (331)
T ss_pred             -EE------EecCC-----------------C-C--------------cHHHHHHHhcCCCCHHH---------------
Confidence             11      11110                 0 0              00000000000000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                               ...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       104 -------------------------~~~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~  150 (331)
T cd05597         104 -------------------------ARFYLAE---MVLAIDSVH--QLGYVHRDIKPDNVLLD---KNGHIRLADFGSCL  150 (331)
T ss_pred             -------------------------HHHHHHH---HHHHHHHHH--hCCeEECCCCHHHEEEC---CCCCEEEEECCcee
Confidence                                     0013344   677888888  99999999999999994   44569999999986


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+......       .....+||+.|||||++..... ....|+.++||||+||++|+|++|+.||.+.+.         
T Consensus       151 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~---------  213 (331)
T cd05597         151 RLLADGTV-------QSNVAVGTPDYISPEILQAMED-GKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---------  213 (331)
T ss_pred             ecCCCCCc-------cccceeccccccCHHHHhhccc-cccCCCCcceeehhhhHHHHHhhCCCCCCCCCH---------
Confidence            54322110       1123579999999999863111 123578899999999999999999999986531         


Q ss_pred             cchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~  428 (539)
                            ...+..|...  .+.+|.. +..+++++++||++||+.++++  |++++++|+||||....+
T Consensus       214 ------~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~  274 (331)
T cd05597         214 ------VETYGKIMNHKEHFQFPPD-VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW  274 (331)
T ss_pred             ------HHHHHHHHcCCCcccCCCc-cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence                  2234445432  2344432 3458999999999999875554  789999999999987654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG4279|consensus

Probab=100.00  E-value=1.1e-37  Score=322.25  Aligned_cols=257  Identities=27%  Similarity=0.409  Sum_probs=187.5

Q ss_pred             eeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCCC
Q psy16343         55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKP  134 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~  134 (539)
                      +||+|+||+||.|+++.|....|||-|........+-+..||.+.+++ .|.|||++++.+..+..+.    |     -+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~k----I-----FM  651 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFK----I-----FM  651 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEE----E-----Ee
Confidence            799999999999999999999999999765444444566788877776 5999999998875543221    1     13


Q ss_pred             CCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHH
Q psy16343        135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY  214 (539)
Q Consensus       135 enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~  214 (539)
                      |.+-    +            |+.       .+     .+.+..|.                                  
T Consensus       652 EqVP----G------------GSL-------Ss-----LLrskWGP----------------------------------  669 (1226)
T KOG4279|consen  652 EQVP----G------------GSL-------SS-----LLRSKWGP----------------------------------  669 (1226)
T ss_pred             ecCC----C------------CcH-------HH-----HHHhccCC----------------------------------
Confidence            3322    0            000       00     01111111                                  


Q ss_pred             HHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCC
Q psy16343        215 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS  294 (539)
Q Consensus       215 ~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~  294 (539)
                              ...+..--.++-+|   ++.++.|+|  .+.|||||||-+|+|++.  -.|.+||.|||-++.+.-      
T Consensus       670 --------lKDNEstm~fYtkQ---ILeGLkYLH--en~IVHRDIKGDNVLvNT--ySGvlKISDFGTsKRLAg------  728 (1226)
T KOG4279|consen  670 --------LKDNESTMNFYTKQ---ILEGLKYLH--ENKIVHRDIKGDNVLVNT--YSGVLKISDFGTSKRLAG------  728 (1226)
T ss_pred             --------CccchhHHHHHHHH---HHHHhhhhh--hcceeeccccCCcEEEee--ccceEEecccccchhhcc------
Confidence                    11111111225566   889999999  999999999999999964  346799999998765421      


Q ss_pred             CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHH
Q psy16343        295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF  374 (539)
Q Consensus       295 ~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~  374 (539)
                        -++...|+.||+.||||||+..  |  ..+|+.++||||+||++.||.||+|||..-.             .++..+|
T Consensus       729 --inP~TETFTGTLQYMAPEvIDq--G--~RGYG~aADIWS~GCT~vEMATGrPPF~Elg-------------spqAAMF  789 (1226)
T KOG4279|consen  729 --INPCTETFTGTLQYMAPEVIDQ--G--PRGYGKAADIWSFGCTMVEMATGRPPFVELG-------------SPQAAMF  789 (1226)
T ss_pred             --CCccccccccchhhhChHhhcc--C--CcCCCchhhhhhccceeEeeccCCCCeeecC-------------ChhHhhh
Confidence              1345568999999999999974  3  4689999999999999999999999997532             2234444


Q ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        375 HSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       375 ~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      +   -|.|...++....+|.+|++||.+|+..||..||+|.++|..||+...
T Consensus       790 k---VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  790 K---VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             h---hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            3   355555554456799999999999999999999999999999999865

>KOG0608|consensus

Probab=100.00  E-value=6.5e-38  Score=321.23  Aligned_cols=263  Identities=28%  Similarity=0.455  Sum_probs=188.6

Q ss_pred             cCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---HHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      +.+.||-|+||.|.++....|...||+|.+.|.....   ...+..|-.||... +.+.||+|+..|+|.++.|   .| 
T Consensus       633 kik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLY---FV-  707 (1034)
T KOG0608|consen  633 KIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLY---FV-  707 (1034)
T ss_pred             EEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceE---EE-
Confidence            3568999999999999999999999999998754332   23466788888874 7999999999999998877   33 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           ++.|-    +.             .+.            .|+-..|-    -||-+..                 
T Consensus       708 -----MdYIP----GG-------------DmM------------SLLIrmgI----FeE~LAR-----------------  732 (1034)
T KOG0608|consen  708 -----MDYIP----GG-------------DMM------------SLLIRMGI----FEEDLAR-----------------  732 (1034)
T ss_pred             -----EeccC----Cc-------------cHH------------HHHHHhcc----CHHHHHH-----------------
Confidence                 34332    00             000            01101111    1221211                 


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                             +|+.+   +.||+.+.|  ..|.|||||||+||||   |..|+|||.||||++++..
T Consensus       733 -----------------------FYIAE---ltcAiesVH--kmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRW  781 (1034)
T KOG0608|consen  733 -----------------------FYIAE---LTCAIESVH--KMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRW  781 (1034)
T ss_pred             -----------------------HHHHH---HHHHHHHHH--hccceecccCccceEE---ccCCceeeeecccccccee
Confidence                                   14444   788999999  9999999999999999   6778899999999987654


Q ss_pred             CCCC-------CC-CC---------C-----------------CCCccccccCcccccchhhcccCCCCCCCCCcccchh
Q psy16343        289 NTSV-------HS-PL---------A-----------------TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  334 (539)
Q Consensus       289 ~~~~-------~~-~~---------~-----------------~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiW  334 (539)
                      ....       +. .+         .                 .-.....+||+.|+|||||.+      .+|+..||||
T Consensus       782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r------~g~~q~cdww  855 (1034)
T KOG0608|consen  782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR------TGYTQLCDWW  855 (1034)
T ss_pred             ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc------cCccccchhh
Confidence            2110       00 00         0                 001234689999999999974      6899999999


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhc--CCCCCCCCCCCCCCHHHHHHHHHhccccccCCC
Q psy16343        335 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ--GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL  412 (539)
Q Consensus       335 SlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~  412 (539)
                      |.|||||+|+.|++||..++.-+.               ..+|.+  ..+.||..  .++|.++.|||.+|. .+++.|+
T Consensus       856 s~gvil~em~~g~~pf~~~tp~~t---------------q~kv~nw~~~l~~~~~--~~ls~e~~~li~kLc-~sad~RL  917 (1034)
T KOG0608|consen  856 SVGVILYEMLVGQPPFLADTPGET---------------QYKVINWRNFLHIPYQ--GNLSKEALDLIQKLC-CSADSRL  917 (1034)
T ss_pred             HhhHHHHHHhhCCCCccCCCCCcc---------------eeeeeehhhccccccc--cccCHHHHHHHHHHh-cChhhhh
Confidence            999999999999999998765331               111221  12344432  479999999999985 5799999


Q ss_pred             C---HHHHhcCCCccCCCCC
Q psy16343        413 S---AASVLKHPWISTAGTA  429 (539)
Q Consensus       413 t---a~e~l~Hpw~~~~~~~  429 (539)
                      +   ++|+..||||+..++.
T Consensus       918 Gkng~d~vKaHpfFkgIDfs  937 (1034)
T KOG0608|consen  918 GKNGADQVKAHPFFKGIDFS  937 (1034)
T ss_pred             cccchhhhhcCccccccchH
Confidence            5   7889999999987654

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.3e-36  Score=311.79  Aligned_cols=270  Identities=22%  Similarity=0.326  Sum_probs=176.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|++ .+.||+|+||.||+|++..++..||+|++..... ....++.+|++++..+ +||||+++++++.++...+  
T Consensus         4 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~--   79 (331)
T cd06649           4 DDDFER-ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS--   79 (331)
T ss_pred             cccceE-EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEE--
Confidence            345665 4679999999999999999999999999864321 2245688999999997 5999999999987654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+.....+ ||.                
T Consensus        80 -lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~-~~~----------------  103 (331)
T cd06649          80 -IC------MEHMD-----------------G-G--------------SLDQVLKEAKRI-PEE----------------  103 (331)
T ss_pred             -EE------eecCC-----------------C-C--------------cHHHHHHHcCCC-CHH----------------
Confidence             11      11110                 0 0              000000000000 000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .++                        .+..+   ++.++.|+|  ++ +|+||||||+|||+..   .+.+||+|||++
T Consensus       104 ~~~------------------------~~~~~---i~~~l~~lH--~~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~  151 (331)
T cd06649         104 ILG------------------------KVSIA---VLRGLAYLR--EKHQIMHRDVKPSNILVNS---RGEIKLCDFGVS  151 (331)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHh--hcCCEEcCCCChhhEEEcC---CCcEEEccCccc
Confidence            000                        02233   667788888  65 6999999999999954   456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC----
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG----  359 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~----  359 (539)
                      ......          .....+||+.|+|||++.+      ..|+.++|+|||||++|+|++|+.||...+..+..    
T Consensus       152 ~~~~~~----------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~  215 (331)
T cd06649         152 GQLIDS----------MANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFG  215 (331)
T ss_pred             cccccc----------ccccCCCCcCcCCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence            754221          1235689999999999863      46889999999999999999999999754321100    


Q ss_pred             ---ccc-C-------------------c---cc-hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCC
Q psy16343        360 ---WQR-G-------------------E---TC-HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKR  411 (539)
Q Consensus       360 ---~~~-~-------------------~---~~-~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R  411 (539)
                         +.. .                   .   .. ......+...+.... ..++   ...+++++++||.+||++||++|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~L~~~P~~R  292 (331)
T cd06649         216 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLP---NGVFTPDFQEFVNKCLIKNPAER  292 (331)
T ss_pred             ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCC---CccccHHHHHHHHHHccCCcccC
Confidence               000 0                   0   00 000011222222221 1112   23578999999999999999999


Q ss_pred             CCHHHHhcCCCccCC
Q psy16343        412 LSAASVLKHPWISTA  426 (539)
Q Consensus       412 ~ta~e~l~Hpw~~~~  426 (539)
                      ||++|+|+||||...
T Consensus       293 pt~~ell~h~~~~~~  307 (331)
T cd06649         293 ADLKMLMNHTFIKRS  307 (331)
T ss_pred             CCHHHHhcChHHhhc
Confidence            999999999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-36  Score=319.30  Aligned_cols=265  Identities=22%  Similarity=0.266  Sum_probs=173.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEc--cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNI--LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      ...|.+ .+.||+|+||.||+|...  .++..||||.+.+.     ....+|++++..+ +|||||+++++|......+ 
T Consensus        91 ~~~y~i-~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~-  162 (392)
T PHA03207         91 RMQYNI-LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTI-SHRAIINLIHAYRWKSTVC-  162 (392)
T ss_pred             cCceEE-EEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhc-CCCCccceeeeEeeCCEEE-
Confidence            344665 467999999999999764  35678999988642     2356899999987 5999999999887554322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .+      ++.+-                 +                .+...+..        .        ...   
T Consensus       163 --lv------~e~~~-----------------~----------------~l~~~l~~--------~--------~~l---  182 (392)
T PHA03207        163 --MV------MPKYK-----------------C----------------DLFTYVDR--------S--------GPL---  182 (392)
T ss_pred             --EE------ehhcC-----------------C----------------CHHHHHHh--------c--------CCC---
Confidence              11      11000                 0                00000000        0        000   


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                          +...+                  ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       183 ----~~~~~------------------~~i~~q---l~~aL~~LH--~~givHrDlkp~Nill~---~~~~~~l~DfG~a  232 (392)
T PHA03207        183 ----PLEQA------------------ITIQRR---LLEALAYLH--GRGIIHRDVKTENIFLD---EPENAVLGDFGAA  232 (392)
T ss_pred             ----CHHHH------------------HHHHHH---HHHHHHHHH--HCCccccCCCHHHEEEc---CCCCEEEccCccc
Confidence                00000                  013344   677788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........      .......+||+.|+|||++..      ..|+.++|||||||++|+|++|..||.+.......    
T Consensus       233 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~----  296 (392)
T PHA03207        233 CKLDAHPD------TPQCYGWSGTLETNSPELLAL------DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS----  296 (392)
T ss_pred             cccCcccc------cccccccccccCccCHhHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH----
Confidence            75432211      112235689999999999863      46889999999999999999999999876432110    


Q ss_pred             ccchhhHHHHHHHHhcC-------------------------CCCCCCC-CCCCCCHHHHHHHHHhccccccCCCCHHHH
Q psy16343        364 ETCHACQEILFHSIQQG-------------------------HYDFPEG-EWSTISDEAKDLIRRLLVKDARKRLSAASV  417 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~-------------------------~~~~p~~-~~~~~s~~~~dli~~lL~~dP~~R~ta~e~  417 (539)
                          .....+...+...                         .+..|.. ....++.++++||++||..||++|||+.|+
T Consensus       297 ----~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~  372 (392)
T PHA03207        297 ----SQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI  372 (392)
T ss_pred             ----HHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH
Confidence                0000011111111                         1111110 002457889999999999999999999999


Q ss_pred             hcCCCccCCCC
Q psy16343        418 LKHPWISTAGT  428 (539)
Q Consensus       418 l~Hpw~~~~~~  428 (539)
                      |+||||....+
T Consensus       373 l~~p~f~~~~~  383 (392)
T PHA03207        373 LSLPLFTKEPI  383 (392)
T ss_pred             hhCchhhccch
Confidence            99999986544

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.1e-36  Score=312.49  Aligned_cols=265  Identities=25%  Similarity=0.422  Sum_probs=178.7

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+++...+++.||+|++.+..   ......+.+|+.++..+ +|+||+++++++++....+   
T Consensus         3 y~~-~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---   77 (332)
T cd05623           3 FEI-LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLY---   77 (332)
T ss_pred             ceE-EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEE---
Confidence            444 468999999999999999999999999996421   11223466788888775 6999999999987664433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+.                 + +              .+...+..           .    .....    
T Consensus        78 lv------~ey~~-----------------~-g--------------~L~~~l~~-----------~----~~~l~----  100 (332)
T cd05623          78 LV------MDYYV-----------------G-G--------------DLLTLLSK-----------F----EDRLP----  100 (332)
T ss_pred             EE------EeccC-----------------C-C--------------cHHHHHHH-----------h----cCCCC----
Confidence            11      11111                 0 0              00000000           0    00000    


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                         ...+                  ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       101 ---~~~~------------------~~~~~q---i~~al~~lH--~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a~~  151 (332)
T cd05623         101 ---EDMA------------------RFYLAE---MVIAIDSVH--QLHYVHRDIKPDNILMD---MNGHIRLADFGSCLK  151 (332)
T ss_pred             ---HHHH------------------HHHHHH---HHHHHHHHH--HCCeEecCCCHHHEEEC---CCCCEEEeecchhee
Confidence               0000                  013334   667788888  99999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +.....       ......+||+.|+|||++..... ....|+.++||||+||++|+|++|++||.+.+           
T Consensus       152 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----------  212 (332)
T cd05623         152 LMEDGT-------VQSSVAVGTPDYISPEILQAMED-GKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----------  212 (332)
T ss_pred             cccCCc-------ceecccccCccccCHHHHhcccc-CCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----------
Confidence            432211       01234689999999999863211 12358899999999999999999999998653           


Q ss_pred             chhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~  428 (539)
                          ....+..|....  +.+|. .+..++++++|||++||+.++++  |++++|+++||||.+..+
T Consensus       213 ----~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~  274 (332)
T cd05623         213 ----LVETYGKIMNHKERFQFPA-QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDW  274 (332)
T ss_pred             ----HHHHHHHHhCCCccccCCC-ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence                223455555443  33443 23568999999999999876655  689999999999987654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG1989|consensus

Probab=100.00  E-value=1.3e-37  Score=333.92  Aligned_cols=265  Identities=22%  Similarity=0.346  Sum_probs=183.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .++|.+|||+.||+|.+...|..||+|++-...+...+.+.+||++|++|.+|+|||.++|.........  .++     
T Consensus        42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~--~~~-----  114 (738)
T KOG1989|consen   42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN--NGV-----  114 (738)
T ss_pred             EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC--Cce-----
Confidence            4689999999999999998889999998855455667788999999999999999999998421110000  001     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       -|-+           -|.+|+=+.++-.           .+-++..+ ++...|+++                      
T Consensus       115 -~Evl-----------lLmEyC~gg~Lvd-----------~mn~Rlq~-~lte~eVLk----------------------  148 (738)
T KOG1989|consen  115 -WEVL-----------LLMEYCKGGSLVD-----------FMNTRLQT-RLTEDEVLK----------------------  148 (738)
T ss_pred             -eEEE-----------eehhhccCCcHHH-----------HHHHHHhc-cCChHHHHH----------------------
Confidence             1211           2334432111000           00011111 123333332                      


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                          |+.+   ++.|+++||..+--|||||||-||||+..   .+..||||||-|+.....-..
T Consensus       149 --------------------If~d---v~~AVa~mH~~~pPiIHRDLKiENvLls~---~g~~KLCDFGSatt~~~~~~~  202 (738)
T KOG1989|consen  149 --------------------IFYD---VCEAVAAMHYLKPPIIHRDLKIENVLLSA---DGNYKLCDFGSATTKILSPTS  202 (738)
T ss_pred             --------------------HHHH---HHHHHHHHhcCCCccchhhhhhhheEEcC---CCCEEeCcccccccccCCCcc
Confidence                                4444   77889999944344999999999999954   456899999988743322110


Q ss_pred             CC-CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HS-PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~-~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                      .. ......-.....|+.|+|||+|.-+.   +.+.+.++|||+|||+||.|++...||.+..                 
T Consensus       203 ~~e~~~ve~eI~k~TTp~YRsPEMIDlys---g~pI~eKsDIWALGclLYkLCy~t~PFe~sg-----------------  262 (738)
T KOG1989|consen  203 AQEVNYVEEEIEKYTTPQYRSPEMIDLYS---GLPIGEKSDIWALGCLLYKLCYFTTPFEESG-----------------  262 (738)
T ss_pred             HHHHHHHHHHHHhhCCccccChHHHhhhc---CCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-----------------
Confidence            00 00000001235699999999998653   3568899999999999999999999997642                 


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                        .-+|.++.|.||+.  +..|..+++||+.||+.||++||++-|++.+
T Consensus       263 --~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  263 --KLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             --ceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence              13688999999974  5789999999999999999999999988753

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.1e-36  Score=312.26  Aligned_cols=265  Identities=26%  Similarity=0.417  Sum_probs=178.7

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||+|++..+++.||||++.+..   ......+.+|+.++..+ +|+||+++++++++....+  
T Consensus         2 ~y~i-~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~--   77 (331)
T cd05624           2 DFEI-IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLY--   77 (331)
T ss_pred             CceE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEE--
Confidence            4555 468999999999999999999999999996521   11223456677777765 6999999999997765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                       .|      +|.+.                 + +              .+...+... ..+ +|..              
T Consensus        78 -lv------~Ey~~-----------------g-g--------------~L~~~l~~~~~~l-~~~~--------------  103 (331)
T cd05624          78 -LV------MDYYV-----------------G-G--------------DLLTLLSKFEDRL-PEDM--------------  103 (331)
T ss_pred             -EE------EeCCC-----------------C-C--------------cHHHHHHHhcCCC-CHHH--------------
Confidence             11      11111                 0 0              000000000 000 0000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                           .                     ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       104 -----~---------------------~~~~~q---i~~~L~~lH--~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a  149 (331)
T cd05624         104 -----A---------------------RFYIAE---MVLAIHSIH--QLHYVHRDIKPDNVLLD---MNGHIRLADFGSC  149 (331)
T ss_pred             -----H---------------------HHHHHH---HHHHHHHHH--HCCeeeccCchHHEEEc---CCCCEEEEeccce
Confidence                 0                     003334   667778887  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .........       .....+||+.|+|||++.+... ....|+.++|+||+||++|+|++|++||.+.+.        
T Consensus       150 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------  213 (331)
T cd05624         150 LKMNQDGTV-------QSSVAVGTPDYISPEILQAMED-GMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------  213 (331)
T ss_pred             eeccCCCce-------eeccccCCcccCCHHHHhcccc-CCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--------
Confidence            754322110       1124689999999999864211 113578899999999999999999999986531        


Q ss_pred             ccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~  428 (539)
                             ...+..|....  +.+|. .+..++++++|||.+||+.++++  |++++++++||||....+
T Consensus       214 -------~~~~~~i~~~~~~~~~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~  274 (331)
T cd05624         214 -------VETYGKIMNHEERFQFPS-HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDW  274 (331)
T ss_pred             -------HHHHHHHHcCCCcccCCC-ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCH
Confidence                   23445555433  33443 24568999999999999976655  468999999999987654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0983|consensus

Probab=100.00  E-value=2.7e-36  Score=282.86  Aligned_cols=258  Identities=26%  Similarity=0.399  Sum_probs=183.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ..||.|+.|.|.+++.+.+|...|||.+.+.. ..+.++++..+.++..+.+.|.||+.++||..+.....-        
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic--------  169 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC--------  169 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH--------
Confidence            45899999999999999999999999997643 234567888888888877789999999999665432210        


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|-+-.                +..              .++..+..+   -||.+.+                     
T Consensus       170 -MelMs~----------------C~e--------------kLlkrik~p---iPE~ilG---------------------  194 (391)
T KOG0983|consen  170 -MELMST----------------CAE--------------KLLKRIKGP---IPERILG---------------------  194 (391)
T ss_pred             -HHHHHH----------------HHH--------------HHHHHhcCC---chHHhhh---------------------
Confidence             110000                000              000001000   2333211                     


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                             +            +.   ..++.|+.|+.- .+||+|||+||.|||+   |..|+|||||||++..+..... 
T Consensus       195 -------k------------~t---va~v~AL~YLKe-KH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkA-  247 (391)
T KOG0983|consen  195 -------K------------MT---VAIVKALYYLKE-KHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKA-  247 (391)
T ss_pred             -------h------------hH---HHHHHHHHHHHH-hcceeecccCccceEE---ccCCCEEeecccccceeecccc-
Confidence                   0            00   115577777763 5699999999999999   5667899999999865433221 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                              .....|.+.|||||-+.-   .....||-++|+||||+.+|+|.+|+.||.+.+.+             .+ 
T Consensus       248 --------htrsAGC~~YMaPERidp---~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-------------Fe-  302 (391)
T KOG0983|consen  248 --------HTRSAGCAAYMAPERIDP---PDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-------------FE-  302 (391)
T ss_pred             --------cccccCCccccCccccCC---CCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-------------HH-
Confidence                    124579999999998863   12467999999999999999999999999885421             23 


Q ss_pred             HHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        373 LFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       373 ~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ++..|.+ .++.+|+.  ..+|+++.+|+..||.+|+.+||.-.++|+|||+.....
T Consensus       303 ~ltkvln~ePP~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  303 VLTKVLNEEPPLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             HHHHHHhcCCCCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence            3444544 44555554  348999999999999999999999999999999987654

>KOG0596|consensus

Probab=100.00  E-value=1.2e-36  Score=308.96  Aligned_cols=261  Identities=27%  Similarity=0.437  Sum_probs=175.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEecc--CCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k--~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+||-+.||++..... ..||+|.+..  .......-+..|+..|.++.+|.+||+|+||=..+...|   .
T Consensus       363 Yei-lk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY---m  437 (677)
T KOG0596|consen  363 YEI-LKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY---M  437 (677)
T ss_pred             hhH-HHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE---E
Confidence            444 46799999999999986544 4566665532  222334568899999999999999999999865544333   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +              ..+|.+|...+.                   . .+..                  .--
T Consensus       438 v------m--------------E~Gd~DL~kiL~-------------------k-~~~~------------------~~~  459 (677)
T KOG0596|consen  438 V------M--------------ECGDIDLNKILK-------------------K-KKSI------------------DPD  459 (677)
T ss_pred             E------e--------------ecccccHHHHHH-------------------h-ccCC------------------Cch
Confidence            2      1              111122221100                   0 0000                  001


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |.+--                     +..|   ++.++.+.|  +.||||.||||.|+|+.+    |.+||+|||+|..+
T Consensus       460 ~~lk~---------------------ywkq---ML~aV~~IH--~~gIVHSDLKPANFLlVk----G~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  460 WFLKF---------------------YWKQ---MLLAVKTIH--QHGIVHSDLKPANFLLVK----GRLKLIDFGIANAI  509 (677)
T ss_pred             HHHHH---------------------HHHH---HHHHHHHHH--HhceeecCCCcccEEEEe----eeEEeeeechhccc
Confidence            21111                     2333   567788888  889999999999999953    56999999999987


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCC-----CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA-----SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~-----~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ...+..-      ...+-|||+.||+||-+........     -..+.++||||||||||+|+.|++||..-        
T Consensus       510 ~~DTTsI------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--------  575 (677)
T KOG0596|consen  510 QPDTTSI------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--------  575 (677)
T ss_pred             Cccccce------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--------
Confidence            6654311      1246799999999998875321111     12457899999999999999999999531        


Q ss_pred             cCccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        362 RGETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                            .+...-++.|....  ++||..   .-..++.|+++.||.+||++|+|+.++|+|||++.
T Consensus       576 ------~n~~aKl~aI~~P~~~Iefp~~---~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  576 ------INQIAKLHAITDPNHEIEFPDI---PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             ------HHHHHHHHhhcCCCccccccCC---CCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence                  11223355666553  355542   11235999999999999999999999999999975

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-36  Score=302.54  Aligned_cols=257  Identities=26%  Similarity=0.409  Sum_probs=178.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .++||+|+||.||++.+..+++.||||++.+...   .....+.+|+.++..+ +||||+++++++.++...+   .|  
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv--   78 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALC---LV--   78 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEE---EE--
Confidence            3679999999999999999999999999964321   1234567899999987 5999999999887654322   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 +..+.            ......+...+  ||.                .+   
T Consensus        79 ----~e~~~-----------------~~~L~------------~~~~~~~~~~~--~~~----------------~~---  104 (285)
T cd05605          79 ----LTLMN-----------------GGDLK------------FHIYNMGNPGF--DEE----------------RA---  104 (285)
T ss_pred             ----EeccC-----------------CCcHH------------HHHHhcCcCCC--CHH----------------HH---
Confidence                11100                 00000            00000000000  000                00   


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.++|+|||++......
T Consensus       105 ---------------------~~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605         105 ---------------------VFYAAE---ITCGLEDLH--RERIVYRDLKPENILLD---DYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             ---------------------HHHHHH---HHHHHHHHH--HCCcEecCCCHHHEEEC---CCCCEEEeeCCCceecCCC
Confidence                                 002233   667788888  99999999999999994   4467999999998754321


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         .....+||+.|+|||++..      ..|+.++|+||+||++|+|++|.+||.+.....           .
T Consensus       156 ~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-----------~  209 (285)
T cd05605         156 E---------TIRGRVGTVGYMAPEVVKN------ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-----------K  209 (285)
T ss_pred             C---------ccccccCCCCccCcHHhcC------CCCCccccchhHHHHHHHHHHCCCCCCCCchhh-----------H
Confidence            1         1124589999999999863      468889999999999999999999998754211           1


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      .+.+...+..+...++    ..+++.+++||.+||..||++|+     +++++++||||...++
T Consensus       210 ~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05605         210 REEVERRVKEDQEEYS----EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANF  269 (285)
T ss_pred             HHHHHHHhhhcccccC----cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCH
Confidence            1223344444444444    35899999999999999999999     8999999999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=5.7e-36  Score=302.59  Aligned_cols=275  Identities=23%  Similarity=0.351  Sum_probs=176.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|.+ .+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|++++..+ +||||+++++++......+   .
T Consensus         7 ~y~~-~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~---l   81 (301)
T cd07873           7 TYIK-LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLT---L   81 (301)
T ss_pred             ceEE-eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEE---E
Confidence            3554 467999999999999999999999999986432 22344677899999987 5999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .++. . +              .+...           +..    ....    .+.
T Consensus        82 v-----------------------~e~~-~-~--------------~l~~~-----------l~~----~~~~----~~~  103 (301)
T cd07873          82 V-----------------------FEYL-D-K--------------DLKQY-----------LDD----CGNS----INM  103 (301)
T ss_pred             E-----------------------Eecc-c-c--------------CHHHH-----------HHh----cCCC----CCH
Confidence            1                       1110 0 0              00000           000    0000    000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ..+-.                     +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++...
T Consensus       104 ~~~~~---------------------~~~q---i~~aL~~lH--~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~  154 (301)
T cd07873         104 HNVKL---------------------FLFQ---LLRGLNYCH--RRKVLHRDLKPQNLLINE---RGELKLADFGLARAK  154 (301)
T ss_pred             HHHHH---------------------HHHH---HHHHHHHHH--hCCeeCCCCCHHHEEECC---CCcEEECcCcchhcc
Confidence            00000                     2233   667778888  999999999999999953   456999999998753


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ......+|+.|+|||++.+     ...|+.++|+|||||++|+|++|++||.+.+..+.........
T Consensus       155 ~~~~~--------~~~~~~~~~~y~~PE~~~~-----~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~  221 (301)
T cd07873         155 SIPTK--------TYSNEVVTLWYRPPDILLG-----STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRIL  221 (301)
T ss_pred             CCCCC--------cccccceeecccCcHHHhC-----CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            32211        1224568999999999863     2457889999999999999999999998754211000000000


Q ss_pred             hhhHHHHHHHHhc----CCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        367 HACQEILFHSIQQ----GHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       367 ~~~~~~~~~~i~~----~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .......+..+..    ..+.+|.       .....++++++|||.+||+.||.+|||++|+|+||||....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         222 GTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             CCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            0000000011100    0111111       11245789999999999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=6.4e-36  Score=298.75  Aligned_cols=255  Identities=25%  Similarity=0.380  Sum_probs=174.3

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||.||++.++.+|+.||+|.+.+...   ........|++++..+ +||||++++++++++...+   .|     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~---lv-----   71 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLC---LV-----   71 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEE---EE-----
Confidence            6999999999999999999999999864221   1233456799999987 6999999999987654332   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|.+-                 + +              .+...+          ...    .....    + |.  .+
T Consensus        72 -~e~~~-----------------g-~--------------~L~~~~----------~~~----~~~~~----~-~~--~~   97 (277)
T cd05607          72 -MSLMN-----------------G-G--------------DLKYHI----------YNV----GERGL----E-ME--RV   97 (277)
T ss_pred             -EecCC-----------------C-C--------------CHHHHH----------Hhc----cccCC----C-HH--HH
Confidence             11100                 0 0              000000          000    00000    0 00  00


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                        ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......  
T Consensus        98 ------------------~~~~~q---i~~al~~lH--~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~~~~~~--  149 (277)
T cd05607          98 ------------------IHYSAQ---ITCGILHLH--SMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGK--  149 (277)
T ss_pred             ------------------HHHHHH---HHHHHHHHH--HCCEEEccCChHhEEEc---CCCCEEEeeceeeeecCCCc--
Confidence                              002233   667778888  99999999999999994   44569999999987543211  


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             ......||+.|+|||++..      ..|+.++|+||+||++|+|++|.+||.+....           .....
T Consensus       150 -------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-----------~~~~~  205 (277)
T cd05607         150 -------TITQRAGTNGYMAPEILKE------EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-----------VAKEE  205 (277)
T ss_pred             -------eeeccCCCCCccCHHHHcc------CCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-----------hhHHH
Confidence                   1124579999999999863      35899999999999999999999999764321           01223


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH----HHHhcCCCccCCCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA----ASVLKHPWISTAGT  428 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta----~e~l~Hpw~~~~~~  428 (539)
                      +...+....+.++.   ..++++++|||++||.+||++||++    +++++||||....+
T Consensus       206 ~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         206 LKRRTLEDEVKFEH---QNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF  262 (277)
T ss_pred             HHHHhhcccccccc---ccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence            44444444444432   3689999999999999999999999    67889999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0666|consensus

Probab=100.00  E-value=5e-37  Score=292.32  Aligned_cols=282  Identities=25%  Similarity=0.333  Sum_probs=176.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCc----EEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTEL----EYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~----~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|+.. ..||+|+||.||+|..+.+..    .+|||.++...  ........||+.+++.+ .|||||.|..+|-..+..
T Consensus        25 ~ye~i-g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   25 EYEGI-GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-KHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             Hhhcc-ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCce
Confidence            45553 458999999999997766543    68999986431  12234567999999887 599999998877542110


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .             .+            +.|+  +..              .++..           +..+....+.   
T Consensus       103 v-------------~l------------~fdY--AEh--------------DL~~I-----------I~fHr~~~~~---  127 (438)
T KOG0666|consen  103 V-------------WL------------LFDY--AEH--------------DLWHI-----------IKFHRASKAK---  127 (438)
T ss_pred             E-------------EE------------Eehh--hhh--------------hHHHH-----------HHHhccchhc---
Confidence            0             00            0011  100              00000           0000000000   


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC-CCCCceeccC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD-QLSPVKLCDF  280 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~-~~~~ikl~DF  280 (539)
                       ..--.-+--|+|+                        ++.++.|+|  ++-|+||||||.|||+..++ ..|.|||+||
T Consensus       128 -~lp~~mvKsilwQ------------------------il~Gv~YLH--~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  128 -QLPRSMVKSILWQ------------------------ILDGVHYLH--SNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             -cCCHHHHHHHHHH------------------------HHhhhHHHh--hhheeeccCCcceEEEeccCCccCeeEeecc
Confidence             0000112224555                        445678999  99999999999999997543 3578999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |||+.+...-.   +.  ..+...+-|.||+|||.+.+     +..|+.++|+||+|||+.|||+-.|.|.+.....-..
T Consensus       181 GlaR~~~~plk---pl--~s~d~VVVTiWYRAPELLLG-----a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~  250 (438)
T KOG0666|consen  181 GLARLFNNPLK---PL--ASLDPVVVTIWYRAPELLLG-----ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTK  250 (438)
T ss_pred             cHHHHhhcccc---cc--ccCCceEEEEEecChHHhcc-----cccccchhhhHHHHHHHHHHHccCccccchhhhcccC
Confidence            99986543211   10  01234578999999999985     5689999999999999999999999998753221000


Q ss_pred             ccCccchhhHHHHHHHHhc--CCC-------------------CCCCCCC------------CCCCHHHHHHHHHhcccc
Q psy16343        361 QRGETCHACQEILFHSIQQ--GHY-------------------DFPEGEW------------STISDEAKDLIRRLLVKD  407 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~--~~~-------------------~~p~~~~------------~~~s~~~~dli~~lL~~d  407 (539)
                      ..      .+...+.+|..  |.+                   .|+...|            ..-++.+.||+.+||+.|
T Consensus       251 ~P------fq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD  324 (438)
T KOG0666|consen  251 NP------FQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD  324 (438)
T ss_pred             CC------chHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence            00      00011111111  000                   0111112            224567999999999999


Q ss_pred             ccCCCCHHHHhcCCCccCCCCC
Q psy16343        408 ARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       408 P~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                      |.+|+||+|+|+|+||+...-.
T Consensus       325 P~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  325 PIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             chhhccHHHHhcccccccCCCC
Confidence            9999999999999999876543

>KOG0589|consensus

Probab=100.00  E-value=1e-36  Score=310.43  Aligned_cols=255  Identities=27%  Similarity=0.431  Sum_probs=192.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|.. .+++|+|+||.++.++++..+..|++|.|.-.  ....+....+|+.++.+++ |||||.+.+.|+.+....  
T Consensus         4 ~~Ye~-~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l--   79 (426)
T KOG0589|consen    4 DNYEV-LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLL--   79 (426)
T ss_pred             chhhh-hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceE--
Confidence            34554 57899999999999999999999999999643  3344556789999999975 999999999998765422  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                 +|+         ...||-|--.                  ..+ ...+...||-.              
T Consensus        80 -----------~Iv---------m~Y~eGg~l~------------------~~i~~~k~~~f~E~~--------------  107 (426)
T KOG0589|consen   80 -----------CIV---------MEYCEGGDLA------------------QLIKEQKGVLFPEER--------------  107 (426)
T ss_pred             -----------EEE---------EeecCCCCHH------------------HHHHHHhhccccHHH--------------
Confidence                       111         1222221100                  000 00011122211              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                .+.|+-|   ++.++.|+|  +++|+|||||+.||+++.+   +.|||.|||+|
T Consensus       108 --------------------------i~~~~~Q---~~~av~ylH--~~~iLHRDlK~~Nifltk~---~~VkLgDfGla  153 (426)
T KOG0589|consen  108 --------------------------ILKWFVQ---ILLAVNYLH--ENRVLHRDLKCANIFLTKD---KKVKLGDFGLA  153 (426)
T ss_pred             --------------------------HHHHHHH---HHHHHHHHH--hhhhhcccchhhhhhcccc---Cceeecchhhh
Confidence                                      1126667   888899999  9999999999999999654   34899999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+.....        ...+.+|||.||+||++.      ...|+.++|||||||++|+|++-+++|.+.+         
T Consensus       154 K~l~~~~~--------~a~tvvGTp~YmcPEil~------d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~---------  210 (426)
T KOG0589|consen  154 KILNPEDS--------LASTVVGTPYYMCPEILS------DIPYNEKSDIWSLGCCLYEMCTLKPAFKASN---------  210 (426)
T ss_pred             hhcCCchh--------hhheecCCCcccCHHHhC------CCCCCccCcchhhcchHHHHHhcccccCccc---------
Confidence            97654332        346889999999999996      3689999999999999999999999999865         


Q ss_pred             ccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        364 ETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                            ...+..+|..+.+ ..|    ...|.+++.||+.||.++|..||+|.++|.+|.+.
T Consensus       211 ------m~~Li~ki~~~~~~Plp----~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  211 ------MSELILKINRGLYSPLP----SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             ------hHHHHHHHhhccCCCCC----ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence                  2345666766663 333    35799999999999999999999999999999876

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=6.6e-36  Score=322.02  Aligned_cols=270  Identities=27%  Similarity=0.409  Sum_probs=182.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.|.+ .+.||+|+||.||+|++..+++.||||+++....  .....+.+|+.++..+ +|+||+++++.+.......
T Consensus        30 ~~~rY~i-~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         30 QAKKYWI-SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cCCCEEE-EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccC
Confidence            3456776 5789999999999999999999999999965322  2234677899999886 5999999987765432111


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                 ++++..       ..-+.++.-+ +              .+...+...       ..     ....+..
T Consensus       108 -----------~~~~~~-------i~lV~Ey~~~-g--------------sL~~~l~~~-------~~-----~~~~l~e  142 (496)
T PTZ00283        108 -----------PENVLM-------IALVLDYANA-G--------------DLRQEIKSR-------AK-----TNRTFRE  142 (496)
T ss_pred             -----------cccceE-------EEEEEeCCCC-C--------------cHHHHHHHh-------hc-----cCCCCCH
Confidence                       111100       0011222100 0              000000000       00     0000000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       .   .+..                     +..|   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       143 -~---~~~~---------------------i~~q---ll~aL~~lH--~~~IiHrDLKP~NILl~~---~~~vkL~DFGl  189 (496)
T PTZ00283        143 -H---EAGL---------------------LFIQ---VLLAVHHVH--SKHMIHRDIKSANILLCS---NGLVKLGDFGF  189 (496)
T ss_pred             -H---HHHH---------------------HHHH---HHHHHHHHH--hCCEecCCCCHHHEEEeC---CCCEEEEeccc
Confidence             0   0011                     2233   566777777  999999999999999953   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.......      .....+.+||+.|+|||++..      ..|+.++|||||||++|+|++|..||.+.+        
T Consensus       190 s~~~~~~~~------~~~~~~~~Gt~~Y~aPE~~~~------~~~s~k~DVwSlGvilyeLltG~~Pf~~~~--------  249 (496)
T PTZ00283        190 SKMYAATVS------DDVGRTFCGTPYYVAPEIWRR------KPYSKKADMFSLGVLLYELLTLKRPFDGEN--------  249 (496)
T ss_pred             Ceecccccc------ccccccccCCcceeCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------
Confidence            875432111      112246789999999999863      468999999999999999999999997653        


Q ss_pred             CccchhhHHHHHHHHhcCCCC-CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        363 GETCHACQEILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~-~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                             ...++..+..+.+. +|    ..+++++++||.+||..||.+||++.++++|||+..
T Consensus       250 -------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        250 -------MEEVMHKTLAGRYDPLP----PSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             -------HHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence                   23355566655543 23    368999999999999999999999999999999864

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.2e-36  Score=318.63  Aligned_cols=261  Identities=21%  Similarity=0.271  Sum_probs=171.0

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|.+ .+.||+|+||.||+|.+..+++.||||....      ....+|+++|.++ +|||||++++++..+...+   .|
T Consensus       170 gy~i-~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~---lv  238 (461)
T PHA03211        170 GFAI-HRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTC---LV  238 (461)
T ss_pred             CeEE-EEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEE---EE
Confidence            4555 4679999999999999999999999996421      2356899999997 5999999999876554322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .+.+.                 +                .+...+..          .     ...    .+.-
T Consensus       239 ------~e~~~-----------------~----------------~L~~~l~~----------~-----~~~----l~~~  260 (461)
T PHA03211        239 ------LPKYR-----------------S----------------DLYTYLGA----------R-----LRP----LGLA  260 (461)
T ss_pred             ------EEccC-----------------C----------------CHHHHHHh----------c-----CCC----CCHH
Confidence                  00000                 0                00000000          0     000    0000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                         .+                  ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++...
T Consensus       261 ---~~------------------~~i~~q---i~~aL~yLH--~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        261 ---QV------------------TAVARQ---LLSAIDYIH--GEGIIHRDIKTENVLVN---GPEDICLGDFGAACFAR  311 (461)
T ss_pred             ---HH------------------HHHHHH---HHHHHHHHH--HCCEEECcCCHHHEEEC---CCCCEEEcccCCceecc
Confidence               00                  013334   667788888  99999999999999995   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....      .......+||+.|+|||++.+      ..|+.++|||||||++|+|++|..|+........       ..
T Consensus       312 ~~~~------~~~~~~~~GT~~Y~APE~~~~------~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~-------~~  372 (461)
T PHA03211        312 GSWS------TPFHYGIAGTVDTNAPEVLAG------DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE-------RR  372 (461)
T ss_pred             cccc------cccccccCCCcCCcCHHHHcC------CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc-------cC
Confidence            2211      011235689999999999863      4689999999999999999998876654321100       00


Q ss_pred             hhHHHHHHHHhcCCC---------------------------CCCCCCCC---CCCHHHHHHHHHhccccccCCCCHHHH
Q psy16343        368 ACQEILFHSIQQGHY---------------------------DFPEGEWS---TISDEAKDLIRRLLVKDARKRLSAASV  417 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~---------------------------~~p~~~~~---~~s~~~~dli~~lL~~dP~~R~ta~e~  417 (539)
                      .....+...|....+                           .+....|.   .++.++++||.+||..||.+|||+.|+
T Consensus       373 ~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~el  452 (461)
T PHA03211        373 PYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAEL  452 (461)
T ss_pred             CcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHH
Confidence            011112222222111                           11112233   467899999999999999999999999


Q ss_pred             hcCCCccC
Q psy16343        418 LKHPWIST  425 (539)
Q Consensus       418 l~Hpw~~~  425 (539)
                      |+||||..
T Consensus       453 L~hp~f~~  460 (461)
T PHA03211        453 LRLPLFQS  460 (461)
T ss_pred             hhCcccCC
Confidence            99999964

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1e-35  Score=319.81  Aligned_cols=261  Identities=23%  Similarity=0.318  Sum_probs=181.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccC-CcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILT-ELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t-~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      ..|.+ .+.||+|+||.||+|.+..+ +..||+|.+..........+.+|++++..+ +|||||+++++++.+...+   
T Consensus        67 ~~y~~-~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~---  141 (478)
T PTZ00267         67 HMYVL-TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLL---  141 (478)
T ss_pred             eeEEE-EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEE---
Confidence            34665 57899999999999998887 788999987543333334567899999986 6999999999997765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...           +.               
T Consensus       142 lv------~E~~~-----------------g-g--------------~L~~~-----------l~---------------  157 (478)
T PTZ00267        142 LI------MEYGS-----------------G-G--------------DLNKQ-----------IK---------------  157 (478)
T ss_pred             EE------EECCC-----------------C-C--------------CHHHH-----------HH---------------
Confidence            11      11110                 0 0              00000           00               


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                               ..+....||..  .+...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       158 ---------~~~~~~~~l~~--~~~~~i~~q---i~~aL~~lH--~~~ivHrDlkp~NIll~---~~~~~kL~DFgla~~  218 (478)
T PTZ00267        158 ---------QRLKEHLPFQE--YEVGLLFYQ---IVLALDEVH--SRKMMHRDLKSANIFLM---PTGIIKLGDFGFSKQ  218 (478)
T ss_pred             ---------HHHhccCCCCH--HHHHHHHHH---HHHHHHHHH--hCCEEECCcCHHhEEEC---CCCcEEEEeCcCcee
Confidence                     00000000000  000002333   667778888  89999999999999995   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......      .....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|++||.+.+           
T Consensus       219 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----------  275 (478)
T PTZ00267        219 YSDSVS------LDVASSFCGTPYYLAPELWER------KRYSKKADMWSLGVILYELLTLHRPFKGPS-----------  275 (478)
T ss_pred             cCCccc------cccccccCCCccccCHhHhCC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----------
Confidence            432211      012346789999999999863      468999999999999999999999997643           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                          ...++..+..+.+...+   ..++.++++||.+||.+||++||++++++.|||+..
T Consensus       276 ----~~~~~~~~~~~~~~~~~---~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        276 ----QREIMQQVLYGKYDPFP---CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             ----HHHHHHHHHhCCCCCCC---ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence                23455666666543211   358999999999999999999999999999999864

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.6e-35  Score=304.06  Aligned_cols=270  Identities=23%  Similarity=0.345  Sum_probs=175.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|++ .+.||+|+||.||+|.+..++..+|+|++..... .....+.+|+++++.+ +||||++++++|.+....+  
T Consensus         4 ~~~y~~-~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~--   79 (333)
T cd06650           4 DDDFEK-ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS--   79 (333)
T ss_pred             hhhhhe-eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEE--
Confidence            345665 4679999999999999999999999999864321 2235688999999997 5999999999987654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+...... |+..               
T Consensus        80 -lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~-~~~~---------------  104 (333)
T cd06650          80 -IC------MEHMD-----------------G-G--------------SLDQVLKKAGRI-PEQI---------------  104 (333)
T ss_pred             -EE------EecCC-----------------C-C--------------cHHHHHHHcCCC-CHHH---------------
Confidence             11      11110                 0 0              000000000000 0000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       ++                        .+..+   ++.++.|+|  ++ +|+||||||+|||+..   .+.+||+|||++
T Consensus       105 -~~------------------------~~~~~---l~~~l~~lH--~~~~ivH~dlkp~Nili~~---~~~~kL~Dfg~~  151 (333)
T cd06650         105 -LG------------------------KVSIA---VIKGLTYLR--EKHKIMHRDVKPSNILVNS---RGEIKLCDFGVS  151 (333)
T ss_pred             -HH------------------------HHHHH---HHHHHHHHH--hcCCEEecCCChhhEEEcC---CCCEEEeeCCcc
Confidence             00                        02233   667788888  64 7999999999999953   456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc---
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW---  360 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~---  360 (539)
                      ......          .....+||+.|+|||++.+      ..|+.++|+||+||++|+|++|+.||......+...   
T Consensus       152 ~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~  215 (333)
T cd06650         152 GQLIDS----------MANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFG  215 (333)
T ss_pred             hhhhhh----------ccccCCCCccccCHHHhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhc
Confidence            644221          1124689999999999863      468889999999999999999999997543211000   


Q ss_pred             ------cc-----------Cccc--------h-hhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCC
Q psy16343        361 ------QR-----------GETC--------H-ACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS  413 (539)
Q Consensus       361 ------~~-----------~~~~--------~-~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t  413 (539)
                            ..           ...+        . .....+...+.+. ...++.   ..++.++++||.+||++||++|||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~~P~~Rpt  292 (333)
T cd06650         216 CPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS---GVFGAEFQDFVNKCLIKNPAERAD  292 (333)
T ss_pred             CcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCC---CCcCHHHHHHHHHhccCCcccCcC
Confidence                  00           0000        0 0000111112111 122221   246889999999999999999999


Q ss_pred             HHHHhcCCCccCC
Q psy16343        414 AASVLKHPWISTA  426 (539)
Q Consensus       414 a~e~l~Hpw~~~~  426 (539)
                      ++|+++||||+..
T Consensus       293 ~~ell~h~~~~~~  305 (333)
T cd06650         293 LKQLMVHAFIKRS  305 (333)
T ss_pred             HHHHhhCHHHhcC
Confidence            9999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=3.8e-35  Score=293.52  Aligned_cols=269  Identities=23%  Similarity=0.304  Sum_probs=172.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|.+..++..||||++....  ......+.+|+.++..+ +||||+++++++.++...+   .|   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---~v---   77 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLY---LI---   77 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEE---EE---
Confidence            467999999999999999999999999986432  12235678899999987 5999999999987654332   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                          .+|--+ .               +...+..        ..       .  ....+...+.
T Consensus        78 --------------------~e~~~~-~---------------l~~~~~~--------~~-------~--~~~~~~~~~~  104 (285)
T cd07861          78 --------------------FEFLSM-D---------------LKKYLDS--------LP-------K--GQYMDAELVK  104 (285)
T ss_pred             --------------------EecCCC-C---------------HHHHHhc--------CC-------C--CCcCCHHHHH
Confidence                                111000 0               0000000        00       0  0000000111


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......
T Consensus       105 ~---------------------~~~q---i~~~L~~lH--~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861         105 S---------------------YLYQ---ILQGILFCH--SRRVLHRDLKPQNLLID---NKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             H---------------------HHHH---HHHHHHHHH--hCCeeecCCCHHHEEEc---CCCcEEECcccceeecCCCc
Confidence            1                     3334   667788888  99999999999999994   44569999999987543221


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......|++.|+|||++..     ...++.++|+|||||++|+|++|++||.+.+..+..+..........
T Consensus       156 ~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~  222 (285)
T cd07861         156 R--------VYTHEVVTLWYRAPEVLLG-----SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPT  222 (285)
T ss_pred             c--------cccCCcccccccChHHhcC-----CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            1        1123468999999999853     24578899999999999999999999987642210000000000000


Q ss_pred             HHHH------HHHh----cCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILF------HSIQ----QGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~------~~i~----~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      +..+      ....    ..........+..+++++++||++||+.||.+|||+.+++.||||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         223 EDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            0000      0000    000000011234589999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG1035|consensus

Probab=100.00  E-value=1.9e-35  Score=323.24  Aligned_cols=164  Identities=30%  Similarity=0.467  Sum_probs=127.3

Q ss_pred             ccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC----------CCCCCCCCCCCcc
Q psy16343        233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN----------TSVHSPLATPLLL  302 (539)
Q Consensus       233 ~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~----------~~~~~~~~~~~~~  302 (539)
                      ++|+   ++++++|+|  ++|||||||||-||+++   ....|||.|||+|+.....          .........+..+
T Consensus       702 LFre---IlEGLaYIH--~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T  773 (1351)
T KOG1035|consen  702 LFRE---ILEGLAYIH--DQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT  773 (1351)
T ss_pred             HHHH---HHHHHHHHH--hCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence            4666   889999999  99999999999999995   4456999999999862210          0011112233567


Q ss_pred             ccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCC
Q psy16343        303 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHY  382 (539)
Q Consensus       303 t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  382 (539)
                      +.+||..|+|||++.+..   ...|+.++|||||||||+||+.   ||...-              -...++..++.|.+
T Consensus       774 s~VGTalYvAPEll~~~~---~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--------------ERa~iL~~LR~g~i  833 (1351)
T KOG1035|consen  774 SQVGTALYVAPELLSDTS---SNKYNSKIDMYSLGIVLFEMLY---PFGTSM--------------ERASILTNLRKGSI  833 (1351)
T ss_pred             cccceeeeecHHHhcccc---cccccchhhhHHHHHHHHHHhc---cCCchH--------------HHHHHHHhcccCCC
Confidence            889999999999997532   1369999999999999999984   675431              12345677788888


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        383 DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       383 ~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      ++|...|..--+..+.+|++||..||.+||||.|+|++.|+-
T Consensus       834 P~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  834 PEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             CCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence            887655666667788999999999999999999999999996

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.3e-35  Score=307.57  Aligned_cols=259  Identities=21%  Similarity=0.244  Sum_probs=165.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |++ .+.||+|+||.||+|.+..++..||+|+..+.      ....|+.++.++ +||||+++++++..+...+   .| 
T Consensus        68 y~~-~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv-  135 (357)
T PHA03209         68 YTV-IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITC---MV-  135 (357)
T ss_pred             cEE-EEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeE---EE-
Confidence            554 46899999999999999999999999986432      235689999886 5999999999887654322   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                            .++--+                .+...           +..    .....    ..-.
T Consensus       136 ----------------------~e~~~~----------------~l~~~-----------l~~----~~~~~----~~~~  158 (357)
T PHA03209        136 ----------------------LPHYSS----------------DLYTY-----------LTK----RSRPL----PIDQ  158 (357)
T ss_pred             ----------------------EEccCC----------------cHHHH-----------HHh----ccCCC----CHHH
Confidence                                  000000                00000           000    00000    0000


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      +.                     .|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++....
T Consensus       159 ~~---------------------~i~~q---i~~aL~~LH--~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~  209 (357)
T PHA03209        159 AL---------------------IIEKQ---ILEGLRYLH--AQRIIHRDVKTENIFIN---DVDQVCIGDLGAAQFPVV  209 (357)
T ss_pred             HH---------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCCEEEecCcccccccc
Confidence            00                     13344   677788888  89999999999999994   445699999999863221


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCC-CCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP-PFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~-PF~~~~~~~~~~~~~~~~~  367 (539)
                      .         ....+.+||+.|+|||++.+      ..|+.++||||+||++|+|+++.. +|.........     ...
T Consensus       210 ~---------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~-----~~~  269 (357)
T PHA03209        210 A---------PAFLGLAGTVETNAPEVLAR------DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEE-----YVK  269 (357)
T ss_pred             C---------cccccccccccccCCeecCC------CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHH-----HHH
Confidence            1         12235689999999999863      468999999999999999998654 44432211000     000


Q ss_pred             hhHHHHHHHHhc---CCCCCC---------------------C-----CCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        368 ACQEILFHSIQQ---GHYDFP---------------------E-----GEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       368 ~~~~~~~~~i~~---~~~~~p---------------------~-----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                      .....+...+..   ....++                     .     .....++.++.+||.+||+.||.+||||+|+|
T Consensus       270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l  349 (357)
T PHA03209        270 SCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL  349 (357)
T ss_pred             HHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence            000111111110   000111                     0     01125678899999999999999999999999


Q ss_pred             cCCCccC
Q psy16343        419 KHPWIST  425 (539)
Q Consensus       419 ~Hpw~~~  425 (539)
                      +||||+.
T Consensus       350 ~hp~f~~  356 (357)
T PHA03209        350 NYPMFAQ  356 (357)
T ss_pred             cCchhcc
Confidence            9999974

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=4.2e-35  Score=294.16  Aligned_cols=255  Identities=26%  Similarity=0.389  Sum_probs=172.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .++||+|+||.||+|.+..+++.||||.+.+....   ....+.+|+.++..+ +|+||+.+++.+.+....+   .|  
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~---lv--   78 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALC---LV--   78 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEE---EE--
Confidence            46799999999999999999999999998643221   123567899999886 6999999998887654322   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          .|.+-                 +..+.            ......+...  -+|..                    
T Consensus        79 ----~e~~~-----------------g~~L~------------~~l~~~~~~~--l~~~~--------------------  103 (285)
T cd05630          79 ----LTLMN-----------------GGDLK------------FHIYHMGEAG--FEEGR--------------------  103 (285)
T ss_pred             ----EEecC-----------------CCcHH------------HHHHHhcccC--CCHHH--------------------
Confidence                11100                 00000            0000000000  00000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                          ...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.++|+|||++......
T Consensus       104 --------------------~~~~~~q---i~~~l~~lH--~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630         104 --------------------AVFYAAE---ICCGLEDLH--QERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             --------------------HHHHHHH---HHHHHHHHH--hCCEEeCCCCHHHEEEC---CCCCEEEeeccceeecCCC
Confidence                                0013334   667788888  99999999999999994   4456999999998643221


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         .....+||+.|+|||++..      ..|+.++|+||+||++|+|++|.+||.+.....           .
T Consensus       156 ~---------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-----------~  209 (285)
T cd05630         156 Q---------TIKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-----------K  209 (285)
T ss_pred             c---------cccCCCCCccccChHHHcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-----------h
Confidence            1         1124579999999999863      468899999999999999999999998643210           0


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTA  426 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~  426 (539)
                      .......+......++    ..+++++++||.+||+.||.+|+|     ++|+++||||...
T Consensus       210 ~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         210 REEVERLVKEVQEEYS----EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             HHHHHhhhhhhhhhcC----ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence            0111111111111222    457899999999999999999999     9999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=1.6e-34  Score=321.66  Aligned_cols=144  Identities=24%  Similarity=0.399  Sum_probs=109.1

Q ss_pred             CCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchh
Q psy16343        255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  334 (539)
Q Consensus       255 vHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiW  334 (539)
                      -+++.+|.|.++...+.  .+++.|||.++........      ....+.+||+.|||||++.+      ..|+.++|||
T Consensus       499 ~~~~~~p~~~~~~~p~~--~~~~~~~~~~~~~~~g~~~------~~~~~~vGT~~Y~APE~l~~------~~~~~~~Diw  564 (669)
T cd05610         499 PTQKPRPHGNLYQTPKQ--VKIGTPYRTPKSVRRGAAP------VEGERILGTPDYLAPELLLG------KPHGPAVDWW  564 (669)
T ss_pred             CCCCCCCCCceeECCcc--ccccccCCCchhhhccccc------ccCCceeeCccccCHHHcCC------CCCCcHHHHH
Confidence            44677777555544333  3688999987754332210      11235689999999999863      4689999999


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH
Q psy16343        335 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA  414 (539)
Q Consensus       335 SlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta  414 (539)
                      |+||++|+|++|.+||.+..               ...++..+....+.+|...+ .++.++.+++.+||..||.+||++
T Consensus       565 SlG~il~ElltG~~pf~~~~---------------~~~~~~~il~~~~~~p~~~~-~~~~~~~~~l~~lL~~dP~~R~ta  628 (669)
T cd05610         565 ALGVCLFEFLTGIPPFNDET---------------PQQVFQNILNRDIPWPEGEE-KLSVNAQNAIEILLTMDPTKRAGL  628 (669)
T ss_pred             HHHHHHHHHHHCCCCCCCCC---------------HHHHHHHHHhcCCCCCcccc-cCCHHHHHHHHHHcccChhHCcCH
Confidence            99999999999999998753               23456667666666665433 678999999999999999999999


Q ss_pred             HHHhcCCCccCCCC
Q psy16343        415 ASVLKHPWISTAGT  428 (539)
Q Consensus       415 ~e~l~Hpw~~~~~~  428 (539)
                      .|+|+||||....+
T Consensus       629 ~e~l~h~~~~~~~~  642 (669)
T cd05610         629 KELKQHPLFHGVDW  642 (669)
T ss_pred             HHHHhCHhhcCCCH
Confidence            99999999986544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.8e-35  Score=327.36  Aligned_cols=271  Identities=24%  Similarity=0.366  Sum_probs=180.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|.+ .+.||+|+||.||+|.+..++..||+|++.....  .....+..|+.++..+ +|||||+++++|.+.....
T Consensus        11 ~l~~YeI-l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266         11 RLNEYEV-IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccCCEEE-EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCE
Confidence            4456765 4689999999999999999999999999864322  2345688899999997 5999999999885432110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                    +.          -+.+|.-+ +              .|...+..  +     ..         ...
T Consensus        89 --------------ly----------IVMEY~~g-G--------------SL~~lL~k--~-----~~---------~~g  113 (1021)
T PTZ00266         89 --------------LY----------ILMEFCDA-G--------------DLSRNIQK--C-----YK---------MFG  113 (1021)
T ss_pred             --------------EE----------EEEeCCCC-C--------------cHHHHHHH--H-----hh---------ccC
Confidence                          00          01111000 0              00000000  0     00         000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-----hCCCCCCCCCCceeecCC--------
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-----QGIAHRDLKPENILCVHP--------  269 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-----~gIvHRDlKpeNiL~~~~--------  269 (539)
                      ..+.+.+..                     |..|   ++.++.|+|.+.     ++||||||||+|||+...        
T Consensus       114 ~L~E~~Il~---------------------Ia~Q---IL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266        114 KIEEHAIVD---------------------ITRQ---LLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             CCCHHHHHH---------------------HHHH---HHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            001111111                     3334   677888998322     569999999999999642        


Q ss_pred             ------CCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHH
Q psy16343        270 ------DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL  343 (539)
Q Consensus       270 ------~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~l  343 (539)
                            +....+||+|||++..+....         ...+.+||+.|+|||++..    ....|+.++||||||||+|+|
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~g----e~~~~s~KSDVWSLG~ILYEL  236 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLH----ETKSYDDKSDMWALGCIIYEL  236 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhc----cCCCCCchhHHHHHHHHHHHH
Confidence                  123458999999987543221         1235689999999999863    124588999999999999999


Q ss_pred             HhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        344 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       344 l~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ++|.+||.....              ...++..+..+ +.+|.   ...+.++.+||.+||..||.+||++.|+|.||||
T Consensus       237 LTGk~PF~~~~~--------------~~qli~~lk~~-p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i  298 (1021)
T PTZ00266        237 CSGKTPFHKANN--------------FSQLISELKRG-PDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGYQII  298 (1021)
T ss_pred             HHCCCCCCcCCc--------------HHHHHHHHhcC-CCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence            999999975431              12233334333 23332   3568999999999999999999999999999999


Q ss_pred             cCCC
Q psy16343        424 STAG  427 (539)
Q Consensus       424 ~~~~  427 (539)
                      ....
T Consensus       299 k~i~  302 (1021)
T PTZ00266        299 KNVG  302 (1021)
T ss_pred             hhcC
Confidence            7543

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=2.1e-34  Score=292.27  Aligned_cols=265  Identities=20%  Similarity=0.304  Sum_probs=175.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||.||+|.+..+|+.||+|.+.....  .......+|+.++.++ +|+||+++++++.+....   
T Consensus         7 ~~y~~-~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~---   81 (309)
T cd07845           7 TEFEK-LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGKHLD---   81 (309)
T ss_pred             cceeE-eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCC---
Confidence            44554 4679999999999999999999999999853221  1123456899999987 599999999988654211   


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                 ++.+          +.++.-+ .+.            .+.....                  .... ..
T Consensus        82 -----------~~~l----------v~e~~~~-~l~------------~~l~~~~------------------~~l~-~~  108 (309)
T cd07845          82 -----------SIFL----------VMEYCEQ-DLA------------SLLDNMP------------------TPFS-ES  108 (309)
T ss_pred             -----------eEEE----------EEecCCC-CHH------------HHHHhcc------------------cCCC-HH
Confidence                       1110          1111000 000            0000000                  0000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       109 ~~~------------------------~~~~q---i~~~l~~lH--~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~  156 (309)
T cd07845         109 QVK------------------------CLMLQ---LLRGLQYLH--ENFIIHRDLKVSNLLLT---DKGCLKIADFGLAR  156 (309)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCCEEECccceee
Confidence            011                        03334   667788888  99999999999999995   44569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ......+++.|+|||++.+     ...|+.++|+|||||++|+|++|.+||.+.+..+       
T Consensus       157 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-------  216 (309)
T cd07845         157 TYGLPAK--------PMTPKVVTLWYRAPELLLG-----CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-------  216 (309)
T ss_pred             ecCCccC--------CCCcccccccccChhhhcC-----CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-------
Confidence            5432211        1123356889999999853     2458889999999999999999999998754321       


Q ss_pred             cchhhHHHHHHHHhc-------------------CCCCCCCC-------CCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        365 TCHACQEILFHSIQQ-------------------GHYDFPEG-------EWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~-------------------~~~~~p~~-------~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                              .+..+..                   +.+.++..       ....++++++|||++||+.||++|||++|++
T Consensus       217 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il  288 (309)
T cd07845         217 --------QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL  288 (309)
T ss_pred             --------HHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence                    1111111                   11112111       1123689999999999999999999999999


Q ss_pred             cCCCccCCCCC
Q psy16343        419 KHPWISTAGTA  429 (539)
Q Consensus       419 ~Hpw~~~~~~~  429 (539)
                      +||||...+..
T Consensus       289 ~h~~f~~~~~~  299 (309)
T cd07845         289 ESSYFKEKPLP  299 (309)
T ss_pred             cChhhccCCCC
Confidence            99999865543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.6e-34  Score=284.48  Aligned_cols=266  Identities=23%  Similarity=0.354  Sum_probs=174.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||+|+||.||+|....+++.||+|++.... .....+.+|+.++..+.+||||+++++++.......    .
T Consensus         7 ~y~~-~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~----~   80 (272)
T cd06637           7 IFEL-VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG----M   80 (272)
T ss_pred             hhhH-HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC----C
Confidence            4554 357999999999999999999999999986533 334678899999998877999999999886532100    0


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            ...+.+          +.++.-+ +              .+...+....              .....     |
T Consensus        81 ------~~~~~i----------v~e~~~~-~--------------~L~~~l~~~~--------------~~~l~-----~  110 (272)
T cd06637          81 ------DDQLWL----------VMEFCGA-G--------------SVTDLIKNTK--------------GNTLK-----E  110 (272)
T ss_pred             ------CcEEEE----------EEEcCCC-C--------------cHHHHHHhcc--------------CCCCC-----H
Confidence                  000110          1111000 0              0000000000              00000     0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      ..                    ...+..|   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++....
T Consensus       111 ~~--------------------~~~~~~q---i~~~l~~LH--~~~ivh~dl~~~nili~---~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637         111 EW--------------------IAYICRE---ILRGLSHLH--QHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             HH--------------------HHHHHHH---HHHHHHHHH--HCCCccCCCCHHHEEEC---CCCCEEEccCCCceecc
Confidence            00                    0002333   667788888  89999999999999995   44569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        ...+.+||+.|+|||++..... ....|+.++|+||+||++|+|++|..||.....            
T Consensus       163 ~~~~--------~~~~~~g~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~------------  221 (272)
T cd06637         163 RTVG--------RRNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------------  221 (272)
T ss_pred             cccc--------cCCcccccccccCHhHhccccC-cCCCCCchhhHHHHHHHHHHHHhCCCCccccCH------------
Confidence            2111        1235689999999999863111 124688899999999999999999999965321            


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                        ..... .+....  .+......++.++++||.+||..||.+|||++++++||||
T Consensus       222 --~~~~~-~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         222 --MRALF-LIPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             --HHHHH-HHhcCC--CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence              11111 111111  1111224578999999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6.8e-35  Score=291.70  Aligned_cols=266  Identities=23%  Similarity=0.324  Sum_probs=168.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|++..+|..||+|.+.....  .....+.+|++++..+ +||||+++++++.+....+   .|   
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~---lv---   77 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLT---LV---   77 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceE---EE---
Confidence            3679999999999999999999999999864321  1234567899999987 6999999999987654322   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC-CCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                          .+|.-+ .               +..... ....+..+.                 ++  
T Consensus        78 --------------------~e~~~~-~---------------l~~~~~~~~~~~~~~~-----------------~~--  102 (284)
T cd07839          78 --------------------FEYCDQ-D---------------LKKYFDSCNGDIDPEI-----------------VK--  102 (284)
T ss_pred             --------------------EecCCC-C---------------HHHHHHhcCCCCCHHH-----------------HH--
Confidence                                111000 0               000000 000000000                 00  


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                            .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......
T Consensus       103 ----------------------~~~~q---i~~al~~LH--~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~  152 (284)
T cd07839         103 ----------------------SFMFQ---LLKGLAFCH--SHNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIP  152 (284)
T ss_pred             ----------------------HHHHH---HHHHHHHHH--HCCEecCCCCHHHEEEc---CCCcEEECccchhhccCCC
Confidence                                  03334   777888888  99999999999999995   3456999999998754322


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc-Cccchh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR-GETCHA  368 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~-~~~~~~  368 (539)
                      ..        ......+|+.|+|||++.+     ...|+.++|+||+||++|+|++|..||.........+.. ......
T Consensus       153 ~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~  219 (284)
T cd07839         153 VR--------CYSAEVVTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT  219 (284)
T ss_pred             CC--------CcCCCccccCCcChHHHhC-----CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCC
Confidence            11        1224568999999999863     245788999999999999999998886433211000000 000000


Q ss_pred             hHHHHHHHHhc-CCC----CCCC-----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        369 CQEILFHSIQQ-GHY----DFPE-----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       369 ~~~~~~~~i~~-~~~----~~p~-----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      .....+..+.. ..+    .++.     .....++++++|||++||..||.+|||++|+++||||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         220 PTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            00000000000 000    0110     0113578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=9.2e-35  Score=290.52  Aligned_cols=252  Identities=27%  Similarity=0.392  Sum_probs=175.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .++||+|+||.||+|++..+++.||+|++.+.. ......+.+|++++.++ +||||+++++++......+   .|    
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv----   77 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRIS---IC----   77 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEE---EE----
Confidence            468999999999999999999999999986432 22234678899999887 6999999999987654322   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                        .|.+              +   + +              .+ ...+.    .||..                   +..
T Consensus        78 --~e~~--------------~---~-~--------------~l-~~~~~----~~~~~-------------------~~~   99 (279)
T cd06619          78 --TEFM--------------D---G-G--------------SL-DVYRK----IPEHV-------------------LGR   99 (279)
T ss_pred             --EecC--------------C---C-C--------------Ch-HHhhc----CCHHH-------------------HHH
Confidence              1110              0   0 0              00 00000    00000                   000


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                           +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......  
T Consensus       100 ---------------------~~~q---i~~~l~~lH--~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~~~~~~~--  148 (279)
T cd06619         100 ---------------------IAVA---VVKGLTYLW--SLKILHRDVKPSNMLVN---TRGQVKLCDFGVSTQLVNS--  148 (279)
T ss_pred             ---------------------HHHH---HHHHHHHHH--HCCEeeCCCCHHHEEEC---CCCCEEEeeCCcceecccc--
Confidence                                 2333   667778888  99999999999999994   4467999999998754321  


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              .....+||+.|+|||++.+      ..++.++|+||+||++|+|++|..||......+..        ....
T Consensus       149 --------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~--------~~~~  206 (279)
T cd06619         149 --------IAKTYVGTNAYMAPERISG------EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS--------LMPL  206 (279)
T ss_pred             --------cccCCCCChhhcCceeecC------CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc--------cchH
Confidence                    1235689999999999863      46888999999999999999999999754321110        0011


Q ss_pred             HHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        372 ILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       372 ~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .....+.... ...+   ...+++++++||.+||..||++||+++|+++||||...
T Consensus       207 ~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         207 QLLQCIVDEDPPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHHHHhccCCCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            2233333222 2222   24578999999999999999999999999999999765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-34  Score=292.90  Aligned_cols=277  Identities=30%  Similarity=0.417  Sum_probs=188.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|.+..+++.||+|.+.+....   ....+.+|++++..+ +||||+++++.+.++...+   
T Consensus         3 y~~-~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---   77 (316)
T cd05574           3 FKK-IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLC---   77 (316)
T ss_pred             eEE-eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEE---
Confidence            443 46799999999999999999999999999754322   334678899999887 5999999999887654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      .|      .|.+.                 + +              .+...+.. ....-+|.                
T Consensus        78 lv------~e~~~-----------------~-~--------------~L~~~~~~~~~~~l~~~----------------  103 (316)
T cd05574          78 LV------MDYCP-----------------G-G--------------ELFRLLQRQPGKCLSEE----------------  103 (316)
T ss_pred             EE------EEecC-----------------C-C--------------CHHHHHHhCCCCccCHH----------------
Confidence            11      11110                 0 0              00000000 00000000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                            .+.                  .+..+   ++.++.|+|  ++||+||||||+||++..   .+.++|+|||++.
T Consensus       104 ------~~~------------------~~~~q---i~~~l~~lH--~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~  151 (316)
T cd05574         104 ------VAR------------------FYAAE---VLLALEYLH--LLGIVYRDLKPENILLHE---SGHIMLSDFDLSK  151 (316)
T ss_pred             ------HHH------------------HHHHH---HHHHHHHHH--HCCeeccCCChHHeEEcC---CCCEEEeecchhh
Confidence                  000                  02333   667788888  999999999999999953   4569999999976


Q ss_pred             ccccCCCCCCC---------------------CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHH
Q psy16343        285 GIKFNTSVHSP---------------------LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL  343 (539)
Q Consensus       285 ~~~~~~~~~~~---------------------~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~l  343 (539)
                      ...........                     ..........||..|+|||++.+      ..++.++|||||||++|+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Di~slG~ll~~l  225 (316)
T cd05574         152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG------DGHGSAVDWWTLGILLYEM  225 (316)
T ss_pred             cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC------CCCCchHHHHHHHHHHHHH
Confidence            44322110000                     00011234689999999999863      3578899999999999999


Q ss_pred             HhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC----HHHHhc
Q psy16343        344 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS----AASVLK  419 (539)
Q Consensus       344 l~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t----a~e~l~  419 (539)
                      ++|..||.+.+.               ...+..+....+.++..  ..++.++++||.+||..||++|||    ++|+|+
T Consensus       226 ~~g~~pf~~~~~---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         226 LYGTTPFKGSNR---------------DETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             hhCCCCCCCCch---------------HHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            999999976532               22344555555555542  237999999999999999999999    999999


Q ss_pred             CCCccCCCCCCCCCCCCccc
Q psy16343        420 HPWISTAGTAHRPLVTPQVI  439 (539)
Q Consensus       420 Hpw~~~~~~~~~~~~~~~~~  439 (539)
                      ||||.+..++......|+.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~  308 (316)
T cd05574         289 HPFFRGVNWALIRHTTPPII  308 (316)
T ss_pred             CchhhcCChhhcccCCCCCC
Confidence            99999887765555555444

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=8.4e-35  Score=299.03  Aligned_cols=145  Identities=23%  Similarity=0.372  Sum_probs=109.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.........      ...+..+|+.|+|||++.. 
T Consensus       183 i~~aL~~LH--~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-  250 (338)
T cd05102         183 VARGMEFLA--SRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYV------RKGSARLPLKWMAPESIFD-  250 (338)
T ss_pred             HHHHHHHHH--HCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchh------cccCCCCCccccCcHHhhc-
Confidence            677788888  99999999999999994   34569999999987543221100      1123456788999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAK  397 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~  397 (539)
                           ..|+.++||||+||++|+|++ |.+||.+....              +.+...+..+.. ..|    ..++++++
T Consensus       251 -----~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~l~  307 (338)
T cd05102         251 -----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--------------EEFCQRLKDGTRMRAP----ENATPEIY  307 (338)
T ss_pred             -----CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--------------HHHHHHHhcCCCCCCC----CCCCHHHH
Confidence                 468999999999999999997 99999865321              223344444432 222    35789999


Q ss_pred             HHHHHhccccccCCCCHHHHhc
Q psy16343        398 DLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       398 dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      +||.+||..||++|||+.|+++
T Consensus       308 ~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         308 RIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.5e-34  Score=290.02  Aligned_cols=256  Identities=26%  Similarity=0.410  Sum_probs=175.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|.+..+++.||+|++.+...   .....+.+|+++++.+ +|+||+.+++++..+...+   .+  
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~---lv--   78 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALC---LV--   78 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEE---EE--
Confidence            3579999999999999999999999999864321   1223467899999987 6999999998887654332   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          .|.+-                 +..+.            ......+... + |+                      
T Consensus        79 ----~e~~~-----------------~~~L~------------~~~~~~~~~~-~-~~----------------------  101 (285)
T cd05632          79 ----LTIMN-----------------GGDLK------------FHIYNMGNPG-F-EE----------------------  101 (285)
T ss_pred             ----EEecc-----------------CccHH------------HHHHHhcCCC-C-CH----------------------
Confidence                01000                 00000            0000000000 0 00                      


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      ..                  ...+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......
T Consensus       102 ~~------------------~~~~~~q---l~~~l~~lH--~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632         102 ER------------------ALFYAAE---ILCGLEDLH--RENTVYRDLKPENILLD---DYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             HH------------------HHHHHHH---HHHHHHHHH--hCCeeecCCCHHHEEEC---CCCCEEEecCCcceecCCC
Confidence            00                  0013334   667788888  99999999999999994   3456999999998643221


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         ...+.+||+.|+|||++.+      ..|+.++|+||+||++|+|++|.+||.+.....           .
T Consensus       156 ~---------~~~~~~g~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-----------~  209 (285)
T cd05632         156 E---------SIRGRVGTVGYMAPEVLNN------QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-----------K  209 (285)
T ss_pred             C---------cccCCCCCcCccChHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-----------H
Confidence            1         1234579999999999863      468899999999999999999999997643110           0


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAG  427 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~  427 (539)
                      .+.+...+..+...++    ..++.++.+||.+||..||++|++     +++++.||||....
T Consensus       210 ~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         210 REEVDRRVLETEEVYS----AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             HHHHHHhhhccccccC----ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence            1223333444433333    468899999999999999999999     88999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-34  Score=297.81  Aligned_cols=284  Identities=21%  Similarity=0.279  Sum_probs=177.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.+.|.+ .+.||+|+||.||+|.+..+|+.||||.+..... ....++.+|+.++..+. ||||+++++++........
T Consensus         3 ~~~~y~i-~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~   80 (336)
T cd07849           3 VGPRYQN-LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFESF   80 (336)
T ss_pred             cccceEE-EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC-CCCcCchhheeeccccccc
Confidence            4566776 5789999999999999999999999999864322 22345778999999874 9999999987754432110


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                 ..+.+          +.++  ..+              .+...+..                 ..... 
T Consensus        81 -----------~~~~l----------v~e~--~~~--------------~l~~~~~~-----------------~~l~~-  105 (336)
T cd07849          81 -----------NDVYI----------VQEL--MET--------------DLYKLIKT-----------------QHLSN-  105 (336)
T ss_pred             -----------ceEEE----------Eehh--ccc--------------CHHHHHhc-----------------CCCCH-
Confidence                       00000          0111  000              00000000                 00000 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..++.                        +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       106 ~~~~~------------------------i~~q---l~~aL~~LH--~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~  153 (336)
T cd07849         106 DHIQY------------------------FLYQ---ILRGLKYIH--SANVLHRDLKPSNLLLN---TNCDLKICDFGLA  153 (336)
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--hCCeeccCCCHHHEEEC---CCCCEEECcccce
Confidence            00010                        2223   667778888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .........     .......+||+.|+|||++..     ...++.++|+||+||++|+|++|++||.+.+.........
T Consensus       154 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~  223 (336)
T cd07849         154 RIADPEHDH-----TGFLTEYVATRWYRAPEIMLN-----SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLIL  223 (336)
T ss_pred             eeccccccc-----cCCcCCcCcCCCccChHHhhC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            754322110     112235689999999998753     2457889999999999999999999997653211000000


Q ss_pred             ccchhhHHHHHHHHhcC--------CCCCCCCC----CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        364 ETCHACQEILFHSIQQG--------HYDFPEGE----WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~--------~~~~p~~~----~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..........+..+...        ...-+...    .+.+++++.|||.+||..||.+|||+.|+++||||....
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         224 GVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             HHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            00000000001111100        00001101    135688999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.4e-34  Score=287.72  Aligned_cols=252  Identities=25%  Similarity=0.360  Sum_probs=166.8

Q ss_pred             eeceeCceEEEEEEEccCCcEEEEEEeccCCCC--C-HHHHHHHHHHHHhh--cCCCCeeeeeeeecccccccccCCeee
Q psy16343         55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--S-RSRVFKEVETFHHC--QGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~-~~~~~~Ei~~l~~~--~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +||+|+||.||++.+..+++.||+|.+.+....  . .....+|..++..+  .+||||+.+++++..+...+   .|  
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---lv--   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLC---FI--   75 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEE---EE--
Confidence            489999999999999999999999998653221  1 12233444333322  36999999999887654332   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          +|.+-                 + +              .+...+...                ...    ....+
T Consensus        76 ----~e~~~-----------------~-~--------------~L~~~i~~~----------------~~l----~~~~~   99 (279)
T cd05633          76 ----LDLMN-----------------G-G--------------DLHYHLSQH----------------GVF----SEKEM   99 (279)
T ss_pred             ----EecCC-----------------C-C--------------CHHHHHHhc----------------CCC----CHHHH
Confidence                11110                 0 0              000000000                000    00000


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      .-                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......
T Consensus       100 ~~---------------------i~~q---i~~al~~lH--~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~~~~~~~  150 (279)
T cd05633         100 RF---------------------YATE---IILGLEHMH--NRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKK  150 (279)
T ss_pred             HH---------------------HHHH---HHHHHHHHH--HCCcCCCCCCHHHEEEC---CCCCEEEccCCcceecccc
Confidence            00                     2233   566778888  99999999999999994   4456999999998643221


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .          ....+||+.|+|||++..     ...|+.++|+||+||++|+|++|..||.+....+            
T Consensus       151 ~----------~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------------  203 (279)
T cd05633         151 K----------PHASVGTHGYMAPEVLQK-----GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------------  203 (279)
T ss_pred             C----------ccCcCCCcCccCHHHhcC-----CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC------------
Confidence            1          124579999999999852     2458899999999999999999999997653221            


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAG  427 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~  427 (539)
                      ...+..........+|    ..+++++++||.+||..||++|+     +++++++||||....
T Consensus       204 ~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         204 KHEIDRMTLTVNVELP----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             HHHHHHHhhcCCcCCc----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            1122222222233333    35899999999999999999999     699999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0695|consensus

Probab=100.00  E-value=3.5e-35  Score=281.81  Aligned_cols=260  Identities=24%  Similarity=0.377  Sum_probs=191.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ..+||+|+|++|.+++++.|.+.||+|+++|.-.   ....-+..|-.++....+||.+|.|+..|+.+....   .|| 
T Consensus       255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf---fvi-  330 (593)
T KOG0695|consen  255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF---FVI-  330 (593)
T ss_pred             eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE---EEE-
Confidence            4689999999999999999999999999976422   233456677778888789999999999998876544   221 


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                           |.+-                 +..              .++. ....+- -||-.       +..          
T Consensus       331 -----eyv~-----------------ggd--------------lmfh-mqrqrk-lpeeh-------arf----------  355 (593)
T KOG0695|consen  331 -----EYVN-----------------GGD--------------LMFH-MQRQRK-LPEEH-------ARF----------  355 (593)
T ss_pred             -----EEec-----------------Ccc--------------eeee-hhhhhc-CcHHH-------hhh----------
Confidence                 1110                 100              0000 000000 12211       111          


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                             +-.+   +..|+.|+|  ++|||.||||.+|+|+   +..+.|||.|+|+.+.--..
T Consensus       356 -----------------------ys~e---i~lal~flh--~rgiiyrdlkldnvll---daeghikltdygmcke~l~~  404 (593)
T KOG0695|consen  356 -----------------------YSAE---ICLALNFLH--ERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGP  404 (593)
T ss_pred             -----------------------hhHH---HHHHHHHHh--hcCeeeeeccccceEE---ccCCceeecccchhhcCCCC
Confidence                                   1111   667788888  9999999999999999   55677999999998742111


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC--CCCCCCCcccCccch
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--NCGEDCGWQRGETCH  367 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~--~~~~~~~~~~~~~~~  367 (539)
                              .....|+||||+|+|||++.+      ..|+.++|||+|||++++|+.|+.||.-  .+..+         .
T Consensus       405 --------gd~tstfcgtpnyiapeilrg------eeygfsvdwwalgvlmfemmagrspfdivgm~n~d---------~  461 (593)
T KOG0695|consen  405 --------GDTTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPD---------M  461 (593)
T ss_pred             --------CcccccccCCCcccchhhhcc------cccCceehHHHHHHHHHHHHcCCCCcceecCCCcc---------c
Confidence                    113469999999999999974      5799999999999999999999999963  22111         1


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC------HHHHhcCCCccCCCCC
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS------AASVLKHPWISTAGTA  429 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t------a~e~l~Hpw~~~~~~~  429 (539)
                      ....-+++.|....+.+|.    .+|-.|..+++..|.+||.+|+.      ..++..||||+..+|.
T Consensus       462 ntedylfqvilekqiripr----slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  462 NTEDYLFQVILEKQIRIPR----SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             chhHHHHHHHhhhcccccc----eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence            1235578889998999986    68999999999999999999985      5789999999988774

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=9.2e-35  Score=291.50  Aligned_cols=262  Identities=24%  Similarity=0.325  Sum_probs=173.8

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      +.||+|+||.||++.+..+++.||||.+.+... .....+.+|+.++.++.+||||+++++++..+...+   .+     
T Consensus        10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~---~~-----   81 (288)
T cd06616          10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCW---IC-----   81 (288)
T ss_pred             HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEE---EE-----
Confidence            579999999999999999999999999864322 234567889999998877999999999876543222   01     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       .|.+              +..+.                .+...+-.        ..      ....    ....+.- 
T Consensus        82 -~e~~--------------~~~l~----------------~l~~~~~~--------~~------~~~l----~~~~~~~-  111 (288)
T cd06616          82 -MELM--------------DISLD----------------KFYKYVYE--------VL------KSVI----PEEILGK-  111 (288)
T ss_pred             -Eecc--------------cCCHH----------------HHHHHHHH--------hh------cCCC----CHHHHHH-
Confidence             0000              00000                00000000        00      0000    0000000 


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                          +..+   ++.++.|+|  + .||+||||||+|||+.   ..+.+||+|||+++...... 
T Consensus       112 --------------------i~~~---i~~~l~~lh--~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~-  162 (288)
T cd06616         112 --------------------IAVA---TVKALNYLK--EELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVDSI-  162 (288)
T ss_pred             --------------------HHHH---HHHHHHHHh--hcCCeeccCCCHHHEEEc---cCCcEEEeecchhHHhccCC-
Confidence                                2222   556777777  6 4999999999999995   34569999999987543211 


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              ......||+.|+|||++...   ....|+.++|+||+||++|+|++|++||.....             ..+
T Consensus       163 --------~~~~~~~~~~y~aPE~~~~~---~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------------~~~  218 (288)
T cd06616         163 --------AKTRDAGCRPYMAPERIDPS---ARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------------VFD  218 (288)
T ss_pred             --------ccccccCccCccCHHHhccc---cccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------------HHH
Confidence                    11234689999999998631   013688999999999999999999999975320             011


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .+...+....+.++...+..++.++.+||++||.+||++|||++++++||||...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         219 QLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             HHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            1222222223344444445689999999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=3e-34  Score=286.72  Aligned_cols=263  Identities=24%  Similarity=0.333  Sum_probs=175.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      |++ .+.||+|+||.||++++..+|..||||.+++... ....++..|+.++.+..+||||+++++++..+...+   .+
T Consensus         3 ~~~-~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~---lv   78 (283)
T cd06617           3 LEV-IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVW---IC   78 (283)
T ss_pred             ceE-EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEE---EE
Confidence            443 3679999999999999999999999999865322 234466778877666678999999999886554322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            +|.+              +-.+...+.               ......... +|                ..+|
T Consensus        79 ------~e~~--------------~~~l~~~l~---------------~~~~~~~~~-~~----------------~~~~  106 (283)
T cd06617          79 ------MEVM--------------DTSLDKFYK---------------KVYDKGLTI-PE----------------DILG  106 (283)
T ss_pred             ------hhhh--------------cccHHHHHH---------------HhccCCCCC-CH----------------HHHH
Confidence                  1110              000000000               000000000 00                0000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      .                        +..|   ++.++.|+|  ++ +|+||||||+|||+.   ..+.+||+|||++...
T Consensus       107 ~------------------------~~~q---i~~~l~~lH--~~~~i~h~dlkp~nil~~---~~~~~kl~dfg~~~~~  154 (283)
T cd06617         107 K------------------------IAVS---IVKALEYLH--SKLSVIHRDVKPSNVLIN---RNGQVKLCDFGISGYL  154 (283)
T ss_pred             H------------------------HHHH---HHHHHHHHh--hcCCeecCCCCHHHEEEC---CCCCEEEeeccccccc
Confidence            0                        2233   667778888  77 999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ....         ......||..|+|||++.+..  ....|+.++|+||+||++|+|++|..||.....           
T Consensus       155 ~~~~---------~~~~~~~~~~y~aPE~~~~~~--~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------  212 (283)
T cd06617         155 VDSV---------AKTIDAGCKPYMAPERINPEL--NQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-----------  212 (283)
T ss_pred             cccc---------ccccccCCccccChhhcCCcc--cccccCccccchhhHHHHHHHHhCCCCCCcccc-----------
Confidence            3211         112357899999999886311  124678899999999999999999999964211           


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                        ..+.+...+......+|.   ..+|.++++||.+||..||++||++++++.||||...
T Consensus       213 --~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         213 --PFQQLKQVVEEPSPQLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             --CHHHHHHHHhcCCCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence              012233333333344443   2478999999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.1e-35  Score=292.72  Aligned_cols=258  Identities=32%  Similarity=0.486  Sum_probs=172.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCH--HHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR--SRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~--~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||+||+|.+..+++.||+|++........  ....+|+.++.++ +||||+++++++.+....+   .
T Consensus         1 y~~-~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~---~   75 (260)
T PF00069_consen    1 YRL-VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLY---I   75 (260)
T ss_dssp             EEE-EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEE---E
T ss_pred             CEE-eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-ccccccccccccccccccc---c
Confidence            444 5789999999999999999999999999976543222  1234589999998 6999999999997744332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .++.-+ +              .+...+..        .        .    ..+.
T Consensus        76 v-----------------------~~~~~~-~--------------~L~~~l~~--------~--------~----~~~~   97 (260)
T PF00069_consen   76 V-----------------------MEYCPG-G--------------SLQDYLQK--------N--------K----PLSE   97 (260)
T ss_dssp             E-----------------------EEEETT-E--------------BHHHHHHH--------H--------S----SBBH
T ss_pred             c-----------------------cccccc-c--------------cccccccc--------c--------c----cccc
Confidence            1                       111000 0              00000000        0        0    0011


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ..+-.                     +..+   ++.++.++|  ++||+||||||+|||+.   ..+.++|+|||++...
T Consensus        98 ~~~~~---------------------~~~q---i~~~L~~Lh--~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   98 EEILK---------------------IAYQ---ILEALAYLH--SKGIVHRDIKPENILLD---ENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             HHHHH---------------------HHHH---HHHHHHHHH--HTTEEESSBSGGGEEES---TTSEEEESSGTTTEES
T ss_pred             ccccc---------------------cccc---ccccccccc--ccccccccccccccccc---cccccccccccccccc
Confidence            11111                     2222   556777777  89999999999999995   4456899999998643


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ....        ......+||+.|+|||++..     ...++.++|+||||+++|+|++|..||......          
T Consensus       149 ~~~~--------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~----------  205 (260)
T PF00069_consen  149 SENN--------ENFNPFVGTPEYMAPEVLQQ-----GKKYTRKSDIWSLGIILYELLTGKLPFEESNSD----------  205 (260)
T ss_dssp             TSTT--------SEBSSSSSSGGGSCHHHHTT-----TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH----------
T ss_pred             cccc--------cccccccccccccccccccc-----cccccccccccccccccccccccccccccccch----------
Confidence            1111        12345689999999999861     246788999999999999999999999864110          


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                        ................+...+...+.++++||.+||..||++||++.++++||||
T Consensus       206 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  206 --DQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             --HHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             --hhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence              1122233333222222221122335899999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.9e-34  Score=290.16  Aligned_cols=271  Identities=21%  Similarity=0.313  Sum_probs=173.4

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|.+..+++.||||++.....  .....+.+|+.++..+.+||||+++++++........   
T Consensus         3 y~~-~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~---   78 (295)
T cd07837           3 YEK-LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK---   78 (295)
T ss_pred             ceE-eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC---
Confidence            454 4679999999999999999999999999864321  2235678899999998778999999988865432100   


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                             + .+.+          +.+|--+ .               +..      |+.    ..... ....+      
T Consensus        79 -------~-~~~l----------v~e~~~~-~---------------l~~------~~~----~~~~~-~~~~~------  107 (295)
T cd07837          79 -------P-SLYL----------VFEYLDS-D---------------LKK------FMD----SNGRG-PGRPL------  107 (295)
T ss_pred             -------c-eEEE----------EeeccCc-C---------------HHH------HHH----Hhccc-CCCCC------
Confidence                   0 0000          1111000 0               000      000    00000 00000      


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       +...+                  ..+..+   ++.++.|+|  ++||+||||||+||++...  .+.+||+|||++...
T Consensus       108 -~~~~~------------------~~~~~q---i~~~L~~LH--~~~i~H~dl~~~nil~~~~--~~~~kl~dfg~~~~~  161 (295)
T cd07837         108 -PAKTI------------------KSFMYQ---LLKGVAHCH--KHGVMHRDLKPQNLLVDKQ--KGLLKIADLGLGRAF  161 (295)
T ss_pred             -CHHHH------------------HHHHHH---HHHHHHHHH--HCCeeecCCChHHEEEecC--CCeEEEeecccceec
Confidence             00000                  013334   677888888  9999999999999999541  456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ......+++.|+|||++.+     ...++.++|+||+||++|+|++|.+||.+.+....        
T Consensus       162 ~~~~~--------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--------  220 (295)
T cd07837         162 SIPVK--------SYTHEIVTLWYRAPEVLLG-----STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--------  220 (295)
T ss_pred             CCCcc--------ccCCcccccCCCChHHhhC-----CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--------
Confidence            32211        1123467899999999853     24578899999999999999999999987542110        


Q ss_pred             hhhHHHHHHHHhcC--------------------CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        367 HACQEILFHSIQQG--------------------HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       367 ~~~~~~~~~~i~~~--------------------~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                         ...++..+...                    ....+......++.++++||.+||..||.+||+++|+|.||||.
T Consensus       221 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         221 ---LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ---HHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence               00011110000                    00000011235789999999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=3.2e-34  Score=286.62  Aligned_cols=253  Identities=24%  Similarity=0.361  Sum_probs=170.0

Q ss_pred             eeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhh--cCCCCeeeeeeeecccccccccCCeee
Q psy16343         55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHC--QGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~--~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +||+|+||.||+|.+..+++.||+|++.+....   .......|..++..+  .+||||+.+++++.+....+   .|  
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~v--   75 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS---FI--   75 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEE---EE--
Confidence            489999999999999999999999998653221   112233343333221  36999999999988765432   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          .|.+.                 + +              .+...+.....+..+.+                    
T Consensus        76 ----~e~~~-----------------g-~--------------~L~~~l~~~~~l~~~~~--------------------   99 (278)
T cd05606          76 ----LDLMN-----------------G-G--------------DLHYHLSQHGVFSEAEM--------------------   99 (278)
T ss_pred             ----EecCC-----------------C-C--------------cHHHHHHhcCCCCHHHH--------------------
Confidence                11110                 0 0              00000000000000000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..+...
T Consensus       100 ---------------------~~~~~q---l~~~l~~lH--~~~i~H~di~p~nili~---~~~~~kl~dfg~~~~~~~~  150 (278)
T cd05606         100 ---------------------RFYAAE---IILGLEHMH--NRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKK  150 (278)
T ss_pred             ---------------------HHHHHH---HHHHHHHHH--HCCEEcCCCCHHHEEEC---CCCCEEEccCcCccccCcc
Confidence                                 013333   667778888  99999999999999995   3456999999998754321


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .          ..+.+||+.|+|||++..     ...|+.++|+||+||++|+|++|..||.+....+            
T Consensus       151 ~----------~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~------------  203 (278)
T cd05606         151 K----------PHASVGTHGYMAPEVLQK-----GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------------  203 (278)
T ss_pred             C----------CcCcCCCcCCcCcHHhcC-----CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc------------
Confidence            1          124589999999999853     2358899999999999999999999998653221            


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      .......+....+.+|.    .+|.++++||.+||..||.+|+     +++++++||||....+
T Consensus       204 ~~~~~~~~~~~~~~~~~----~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         204 KHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             hHHHHHHhhccCCCCCC----cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence            12233333334444443    5799999999999999999999     9999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-34  Score=283.49  Aligned_cols=253  Identities=28%  Similarity=0.440  Sum_probs=173.3

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-----CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-----HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-----~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      |.+ ++.||+|+||.||+|.+..++..||+|.+.....     .....+.+|++++.++ +||||+++++++++....+ 
T Consensus         4 ~~~-~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~-   80 (263)
T cd06625           4 WRR-GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS-   80 (263)
T ss_pred             ccc-cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE-
Confidence            444 6789999999999999999999999999864321     1234577899999987 6999999999987765322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         ++     .|.+-                 + +              .+...+.....++.+..              
T Consensus        81 ---~v-----~e~~~-----------------~-~--------------~l~~~~~~~~~~~~~~~--------------  106 (263)
T cd06625          81 ---IF-----MEYMP-----------------G-G--------------SVKDQLKAYGALTETVT--------------  106 (263)
T ss_pred             ---EE-----EEECC-----------------C-C--------------cHHHHHHHhCCCCHHHH--------------
Confidence               11     01000                 0 0              00000000000000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++
T Consensus       107 ---------------------------~~~~~~---l~~~l~~lH--~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~  151 (263)
T cd06625         107 ---------------------------RKYTRQ---ILEGVEYLH--SNMIVHRDIKGANILRD---SAGNVKLGDFGAS  151 (263)
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEc---CCCCEEEeecccc
Confidence                                       002333   667778888  99999999999999995   3456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +........     .......+|++.|+|||++.+      ..++.++|+||+||++|+|++|++||.....        
T Consensus       152 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------  212 (263)
T cd06625         152 KRLQTICSS-----GTGMKSVTGTPYWMSPEVISG------EGYGRKADVWSVGCTVVEMLTEKPPWAEFEA--------  212 (263)
T ss_pred             eeccccccc-----cccccCCCcCccccCcceecc------CCCCchhhhHHHHHHHHHHHhCCCCccccch--------
Confidence            754321110     001134578999999999863      3588999999999999999999999975421        


Q ss_pred             ccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        364 ETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                            .. ....+...  .+.+|    ..++.++++||.+||.+||++|||+.|+++||||
T Consensus       213 ------~~-~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         213 ------MA-AIFKIATQPTNPQLP----SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             ------HH-HHHHHhccCCCCCCC----ccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence                  11 22222222  22333    3589999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-34  Score=283.82  Aligned_cols=252  Identities=29%  Similarity=0.399  Sum_probs=176.4

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      +.||+|+||.||+|.+..+++.||||++.+....   ....+..|..++....+||||++++++++.+...+   .|   
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~---lv---   75 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLY---LV---   75 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEE---EE---
Confidence            4689999999999999999999999999653221   12234556666655568999999999987654332   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .|.+-                 + +              .+...+.....+..+                 +++   
T Consensus        76 ---~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~-----------------~~~---  100 (260)
T cd05611          76 ---MEYLN-----------------G-G--------------DCASLIKTLGGLPED-----------------WAK---  100 (260)
T ss_pred             ---EeccC-----------------C-C--------------CHHHHHHHcCCCCHH-----------------HHH---
Confidence               11100                 0 0              000000000000000                 000   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++.....  
T Consensus       101 ---------------------~i~~q---i~~aL~~lH--~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~--  149 (260)
T cd05611         101 ---------------------QYIAE---VVLGVEDLH--QRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLE--  149 (260)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHeEEC---CCCcEEEeecccceeccc--
Confidence                                 02334   667788888  89999999999999994   445699999999864322  


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                                .....|++.|+|||++.+      ..|+.++|+||+||++|+|++|.+||.+.+               .
T Consensus       150 ----------~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------------~  198 (260)
T cd05611         150 ----------NKKFVGTPDYLAPETILG------VGDDKMSDWWSLGCVIFEFLFGYPPFHAET---------------P  198 (260)
T ss_pred             ----------cccCCCCcCccChhhhcC------CCCcchhhhHHHHHHHHHHHHCCCCCCCCC---------------H
Confidence                      124578999999999863      347889999999999999999999997643               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH---HHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA---ASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta---~e~l~Hpw~~~~~~  428 (539)
                      ..++..+..+...++......+++++++||.+||..||++||++   +|+|.||||....|
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         199 DAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             HHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence            33555666666666655445689999999999999999999955   79999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4e-34  Score=287.49  Aligned_cols=252  Identities=30%  Similarity=0.525  Sum_probs=182.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |.+ .+.||+|+||.||++.+..+++.||+|++.+..   ......+.+|+++++++. ||||+++++++.++...+   
T Consensus         3 y~~-~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~---   77 (290)
T cd05580           3 FEF-IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLY---   77 (290)
T ss_pred             eEE-EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEE---
Confidence            454 468999999999999999999999999986432   123456788999999874 999999999887654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .                       +.+|.-+ +              .+...+.....+..+..                
T Consensus        78 ~-----------------------v~e~~~~-~--------------~L~~~~~~~~~l~~~~~----------------  103 (290)
T cd05580          78 L-----------------------VMEYVPG-G--------------ELFSHLRKSGRFPEPVA----------------  103 (290)
T ss_pred             E-----------------------EEecCCC-C--------------CHHHHHHHcCCCCHHHH----------------
Confidence            1                       1111100 0              00000000000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                             .                  .+..+   ++.++.|+|  ++||+||||||.|||+.   ..+.+||+|||++..
T Consensus       104 -------~------------------~~~~q---il~~l~~lH--~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~~  150 (290)
T cd05580         104 -------R------------------FYAAQ---VVLALEYLH--SLDIVYRDLKPENLLLD---SDGYIKITDFGFAKR  150 (290)
T ss_pred             -------H------------------HHHHH---HHHHHHHHH--HCCEecCCCCHHHEEEC---CCCCEEEeeCCCccc
Confidence                   0                  02233   667778888  99999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ....           ....+||+.|+|||.+..      ..++.++|+|||||++|+|++|.+||.+.+           
T Consensus       151 ~~~~-----------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------  202 (290)
T cd05580         151 VKGR-----------TYTLCGTPEYLAPEIILS------KGYGKAVDWWALGILIYEMLAGYPPFFDDN-----------  202 (290)
T ss_pred             cCCC-----------CCCCCCCccccChhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCC-----------
Confidence            4322           135589999999998853      357789999999999999999999997643           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                          .......+..+.+.+|.    .++..+++||++||..||.+|+     +++|+++||||....+
T Consensus       203 ----~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  262 (290)
T cd05580         203 ----PIQIYEKILEGKVRFPS----FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDW  262 (290)
T ss_pred             ----HHHHHHHHhcCCccCCc----cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCH
Confidence                23355666677777764    4689999999999999999999     8999999999976543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0669|consensus

Probab=100.00  E-value=6.9e-36  Score=277.10  Aligned_cols=280  Identities=23%  Similarity=0.344  Sum_probs=180.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEec--cCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~--k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ...||+|.||.||+|+.+.+|+.||+|++-  ......-...++|+.+|..+ .|+|++.|++.+.....-...      
T Consensus        22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r------   94 (376)
T KOG0669|consen   22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNR------   94 (376)
T ss_pred             HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCccc------
Confidence            356999999999999999999999998762  21222234568999999986 599999999988654321100      


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                      | +..--++        .+.|.-+++ |+-.              .+  ...+..-|+..                    
T Consensus        95 ~-r~t~ylV--------f~~cehDLa-GlLs--------------n~--~vr~sls~Ikk--------------------  128 (376)
T KOG0669|consen   95 D-RATFYLV--------FDFCEHDLA-GLLS--------------NR--KVRFSLSEIKK--------------------  128 (376)
T ss_pred             c-cceeeee--------HHHhhhhHH-HHhc--------------Cc--cccccHHHHHH--------------------
Confidence            0 0000000        011111111 1000              00  00010111100                    


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                            ++.+   +..++.|+|  ++.|+|||+||+|+|++   ..+.+||+|||+++.+....
T Consensus       129 ----------------------~Mk~---Lm~GL~~iH--r~kilHRDmKaaNvLIt---~dgilklADFGlar~fs~~~  178 (376)
T KOG0669|consen  129 ----------------------VMKG---LMNGLYYIH--RNKILHRDMKAANVLIT---KDGILKLADFGLARAFSTSK  178 (376)
T ss_pred             ----------------------HHHH---HHHHHHHHH--HhhHHhhcccHhhEEEc---CCceEEeeccccccceeccc
Confidence                                  3334   678888999  99999999999999994   55679999999998765433


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc--------
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR--------  362 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~--------  362 (539)
                      ..    ..+..+..+-|+||+.||.+.+     ...|+.+.|||..|||+.+|.+|.|-|.|.+...+.-.+        
T Consensus       179 n~----~kprytnrvvTLwYrppEllLG-----~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t  249 (376)
T KOG0669|consen  179 NV----VKPRYTNRVVTLWYRPPELLLG-----DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT  249 (376)
T ss_pred             cc----CCCCcccceeeeecCCHHHhhc-----ccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence            21    1223445678999999999986     467999999999999999999999999987643211000        


Q ss_pred             Cccchh-hHHHHHHHHhcCCCCCCCCCCCC---------CCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        363 GETCHA-CQEILFHSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       363 ~~~~~~-~~~~~~~~i~~~~~~~p~~~~~~---------~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .+..+. ..-.+++.|...+  +|......         -.++|.||+.+||..||.+|+.++++|+|.||...
T Consensus       250 kevWP~~d~lpL~~sie~eP--l~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  250 KEVWPNVDNLPLYQSIELEP--LPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             cccCCCcccchHHHhccCCC--CCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            000000 0112344442211  22221111         24689999999999999999999999999999864

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-34  Score=311.10  Aligned_cols=169  Identities=25%  Similarity=0.294  Sum_probs=113.5

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++|||||||||+|||+.   ..+.+||+|||+++.+.....       ....+.+||+.|+|||++.+ 
T Consensus       276 l~~aL~yLH--~~gIiHrDLKP~NILl~---~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-  342 (501)
T PHA03210        276 LLCAVEYIH--DKKLIHRDIKLENIFLN---CDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAG-  342 (501)
T ss_pred             HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcC-
Confidence            667888888  89999999999999994   445699999999976533211       11235689999999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc----------CccchhhHHHHHHHHhcCCCCC-----
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR----------GETCHACQEILFHSIQQGHYDF-----  384 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~-----  384 (539)
                           ..|+.++|||||||++|+|++|..|+.+..........          .+........++..|....+..     
T Consensus       343 -----~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~  417 (501)
T PHA03210        343 -----DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSV  417 (501)
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccch
Confidence                 56899999999999999999987554432211100000          0000000111222222111110     


Q ss_pred             CCC-CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        385 PEG-EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       385 p~~-~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      +.. ....++.++.++|.+||..||.+||||.|+|.||||...
T Consensus       418 ~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        418 PPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             hhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            000 012356788999999999999999999999999999754

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.8e-34  Score=284.58  Aligned_cols=257  Identities=25%  Similarity=0.398  Sum_probs=171.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|.+ .+.||+|+||.||+|.+..+++.||+|+++.........+.+|+.++..+ +||||+++++++.+....+   .+
T Consensus        10 ~~~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~---lv   84 (267)
T cd06645          10 DFEL-IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLW---IC   84 (267)
T ss_pred             HHHH-HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEE---EE
Confidence            4554 36799999999999999999999999998654333344577899988886 6999999999886654332   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                             .+|.-+ +              .+...+........+..                  
T Consensus        85 -----------------------~e~~~~-~--------------~L~~~~~~~~~~~~~~~------------------  108 (267)
T cd06645          85 -----------------------MEFCGG-G--------------SLQDIYHVTGPLSESQI------------------  108 (267)
T ss_pred             -----------------------EeccCC-C--------------cHHHHHHhcCCCCHHHH------------------
Confidence                                   111000 0              00000000000000000                  


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                           +                  .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++....
T Consensus       109 -----~------------------~~~~~---i~~~l~~lH--~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~  157 (267)
T cd06645         109 -----A------------------YVSRE---TLQGLYYLH--SKGKMHRDIKGANILLT---DNGHVKLADFGVSAQIT  157 (267)
T ss_pred             -----H------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCCEEECcceeeeEcc
Confidence                 0                  02233   667788888  89999999999999994   34569999999986543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        .....+||+.|+|||++...   ....|+.++|+||+||++|+|++|.+||......           
T Consensus       158 ~~~~--------~~~~~~~~~~y~aPE~~~~~---~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-----------  215 (267)
T cd06645         158 ATIA--------KRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-----------  215 (267)
T ss_pred             Cccc--------ccccccCcccccChhhhccc---cCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-----------
Confidence            2111        12345799999999997421   1245888999999999999999999999754321           


Q ss_pred             hhHHHHHHHHhcCCCCCCCC-CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        368 ACQEILFHSIQQGHYDFPEG-EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~-~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                         ..+. .+....+..+.. .-..++..+++||.+||..||++||+++++++|||
T Consensus       216 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         216 ---RALF-LMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             ---hhHH-hhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence               1111 122222222211 01246789999999999999999999999999999

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=4.4e-34  Score=293.29  Aligned_cols=277  Identities=23%  Similarity=0.329  Sum_probs=179.3

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC--------------HHHHHHHHHHHHhhcCCCCee
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS--------------RSRVFKEVETFHHCQGHPNII  109 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~--------------~~~~~~Ei~~l~~~~~HpnIv  109 (539)
                      .+.+.|....+.||+|+||.||+|.+..+++.||||++.+.....              ...+.+|++++..+ +||||+
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv   83 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIM   83 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCccee
Confidence            356667655778999999999999999999999999986432111              12467899999987 599999


Q ss_pred             eeeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccc
Q psy16343        110 QLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV  189 (539)
Q Consensus       110 ~l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~  189 (539)
                      ++++++..+...+   .+      +|.+-              -++...                   +......+.+. 
T Consensus        84 ~~~~~~~~~~~~~---lv------~e~~~--------------~~l~~~-------------------l~~~~~~~~~~-  120 (335)
T PTZ00024         84 GLVDVYVEGDFIN---LV------MDIMA--------------SDLKKV-------------------VDRKIRLTESQ-  120 (335)
T ss_pred             eeeEEEecCCcEE---EE------Eeccc--------------cCHHHH-------------------HHhcCCCCHHH-
Confidence            9999987654322   11      11100              000000                   00000000000 


Q ss_pred             ccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC
Q psy16343        190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP  269 (539)
Q Consensus       190 ~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~  269 (539)
                                         .                     ..+..|   ++.++.|+|  ++||+||||||+|||+.  
T Consensus       121 -------------------~---------------------~~~~~q---l~~aL~~LH--~~~i~H~dl~~~nill~--  153 (335)
T PTZ00024        121 -------------------V---------------------KCILLQ---ILNGLNVLH--KWYFMHRDLSPANIFIN--  153 (335)
T ss_pred             -------------------H---------------------HHHHHH---HHHHHHHHH--hCCeecccccHHHeEEC--
Confidence                               0                     003344   667788888  99999999999999994  


Q ss_pred             CCCCCceeccCCCccccccCCCCC------CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHH
Q psy16343        270 DQLSPVKLCDFDLGSGIKFNTSVH------SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL  343 (539)
Q Consensus       270 ~~~~~ikl~DFGla~~~~~~~~~~------~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~l  343 (539)
                       ..+.+||+|||++..........      ............+++.|+|||++.+     ...++.++|+|||||++|+|
T Consensus       154 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~~l~el  227 (335)
T PTZ00024        154 -SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG-----AEKYHFAVDMWSVGCIFAEL  227 (335)
T ss_pred             -CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc-----CCCCCcHHHHHHHHHHHHHH
Confidence             44569999999987543111000      0000112234568999999999853     23578899999999999999


Q ss_pred             HhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC-CCCC----------------CC---CCCCCCCHHHHHHHHHh
Q psy16343        344 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG-HYDF----------------PE---GEWSTISDEAKDLIRRL  403 (539)
Q Consensus       344 l~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~----------------p~---~~~~~~s~~~~dli~~l  403 (539)
                      ++|.+||.+.+..+.           ...+...+... ...+                +.   ......+.++.+||.+|
T Consensus       228 ~tg~~p~~~~~~~~~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  296 (335)
T PTZ00024        228 LTGKPLFPGENEIDQ-----------LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL  296 (335)
T ss_pred             HhCCCCCCCCCHHHH-----------HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHH
Confidence            999999987642210           00011111000 0000                00   01234688999999999


Q ss_pred             ccccccCCCCHHHHhcCCCccCCCC
Q psy16343        404 LVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       404 L~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      |..||++||+++|+|.||||.....
T Consensus       297 l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        297 LKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             cCCCchhccCHHHHhcCcccCCCCC
Confidence            9999999999999999999986544

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=5e-34  Score=287.94  Aligned_cols=258  Identities=27%  Similarity=0.392  Sum_probs=178.0

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      ...|.+ .+.||+|+||.||+|++..++..||+|.+..........+.+|+.++..+ +||||+++++++.++...+   
T Consensus        19 ~~~y~~-~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~---   93 (296)
T cd06654          19 KKKYTR-FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW---   93 (296)
T ss_pred             ccceee-EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEE---
Confidence            345554 46799999999999999999999999999765444456788899999885 6999999999887654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      .|.+-                 + +              .+...+..                 ...    +
T Consensus        94 lv------~e~~~-----------------~-~--------------~L~~~~~~-----------------~~~----~  114 (296)
T cd06654          94 VV------MEYLA-----------------G-G--------------SLTDVVTE-----------------TCM----D  114 (296)
T ss_pred             Ee------ecccC-----------------C-C--------------CHHHHHHh-----------------cCC----C
Confidence            11      11100                 0 0              00000000                 000    0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ...+-                     .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       115 ~~~~~---------------------~i~~q---l~~aL~~LH--~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~~~  165 (296)
T cd06654         115 EGQIA---------------------AVCRE---CLQALEFLH--SNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQ  165 (296)
T ss_pred             HHHHH---------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEc---CCCCEEECccccchh
Confidence            00000                     02233   566777777  99999999999999994   345699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+|++.|+|||.+.+      ..++.++|+||+||++|+|++|++||......         
T Consensus       166 ~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~---------  222 (296)
T cd06654         166 ITPEQS--------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL---------  222 (296)
T ss_pred             cccccc--------ccCcccCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHH---------
Confidence            432211        1224579999999999863      45778999999999999999999999765321         


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           .........+....+.  ...++..+++||.+||..||++|||++++++||||...
T Consensus       223 -----~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         223 -----RALYLIATNGTPELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             -----HhHHHHhcCCCCCCCC--ccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence                 1122222222222211  23588999999999999999999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=7.9e-34  Score=283.99  Aligned_cols=264  Identities=25%  Similarity=0.370  Sum_probs=177.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      ++.|++ .+.||+|+||.||+|.+..++..+|+|.+..........+.+|++++..+ +||||+++++++..+...+   
T Consensus         4 ~~~~~i-~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~---   78 (282)
T cd06643           4 EEFWEI-IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLW---   78 (282)
T ss_pred             HHHHHH-HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEE---
Confidence            345665 35699999999999999999999999998654333345677899999887 6999999999886654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                       +                      +.+|.-+ +              .+...           +...    ....+ ...
T Consensus        79 -~----------------------v~e~~~~-~--------------~l~~~-----------~~~~----~~~l~-~~~  104 (282)
T cd06643          79 -I----------------------LIEFCAG-G--------------AVDAV-----------MLEL----ERPLT-EPQ  104 (282)
T ss_pred             -E----------------------EEEecCC-C--------------cHHHH-----------HHhc----CCCCC-HHH
Confidence             1                      1111000 0              00000           0000    00000 000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       105 ~~------------------------~~~~q---i~~~L~~LH--~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~  152 (282)
T cd06643         105 IR------------------------VVCKQ---TLEALNYLH--ENKIIHRDLKAGNILFT---LDGDIKLADFGVSAK  152 (282)
T ss_pred             HH------------------------HHHHH---HHHHHHHHH--HCCeeecCCCcccEEEc---cCCCEEEcccccccc
Confidence            00                        02233   667778888  99999999999999994   345699999999865


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+||+.|+|||++.... .....|+.++|+||+||++|+|++|.+||...+.          
T Consensus       153 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----------  213 (282)
T cd06643         153 NTRTIQ--------RRDSFIGTPYWMAPEVVMCET-SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP----------  213 (282)
T ss_pred             cccccc--------ccccccccccccCHhhccccC-CCCCCCCccchhhhHHHHHHHHccCCCCccccCH----------
Confidence            322111        123467999999999985211 1134578899999999999999999999976431          


Q ss_pred             chhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                          .+ ....+..... ..+  ....++.++++||.+||..||.+||+++++++||||...
T Consensus       214 ----~~-~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         214 ----MR-VLLKIAKSEPPTLA--QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             ----HH-HHHHHhhcCCCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence                11 2222322221 111  123578999999999999999999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=3.2e-34  Score=286.87  Aligned_cols=268  Identities=26%  Similarity=0.371  Sum_probs=170.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||.|+||.||+|++..++..||||.+....  ......+.+|++++.++ +||||++++++++++...+   .|   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~---~v---   77 (284)
T cd07860           5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLY---LV---   77 (284)
T ss_pred             eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEE---EE---
Confidence            357899999999999999999999999986432  12235678899999997 5999999999887654322   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                          .+|- . +              .+..      |     +..   ......    +.-.+.
T Consensus        78 --------------------~e~~-~-~--------------~l~~------~-----~~~---~~~~~l----~~~~~~  103 (284)
T cd07860          78 --------------------FEFL-H-Q--------------DLKK------F-----MDA---SPLSGI----PLPLIK  103 (284)
T ss_pred             --------------------eecc-c-c--------------CHHH------H-----HHh---CCCCCC----CHHHHH
Confidence                                1110 0 0              0000      0     000   000000    000000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .                     +..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++.......
T Consensus       104 ~---------------------~~~~---i~~~l~~lh--~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860         104 S---------------------YLFQ---LLQGLAFCH--SHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             H---------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCCEEEeeccchhhcccCc
Confidence            0                     2233   667788888  89999999999999995   34569999999987543221


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......+++.|+|||++.+     ...++.++|+|||||++|+|++|..||.+.+..+......+......
T Consensus       155 ~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~  221 (284)
T cd07860         155 R--------TYTHEVVTLWYRAPEILLG-----CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD  221 (284)
T ss_pred             c--------ccccccccccccCCeEEec-----CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            1        1223467899999998753     23467889999999999999999999987542110000000000000


Q ss_pred             HHHH---HHHhcCCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILF---HSIQQGHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~---~~i~~~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ...+   ..+......++.       .....+++++++||.+||..||++|||++++++||||
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         222 EVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             hhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            0000   000000011111       1123578999999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=6.2e-34  Score=286.04  Aligned_cols=270  Identities=24%  Similarity=0.299  Sum_probs=169.3

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|.+ .+.||+|+||.||+|.+..++..||+|++..... .....+.+|++++..+ +|+||+++++++.++...+   .
T Consensus         6 ~y~~-~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~---l   80 (291)
T cd07870           6 SYLN-LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLT---F   80 (291)
T ss_pred             eeEE-EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEE---E
Confidence            4544 4679999999999999999999999999864322 2234567899999987 5999999999987654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCcccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      |      .|.+              +   + .               +...+ .......++.+                
T Consensus        81 v------~e~~--------------~---~-~---------------l~~~~~~~~~~~~~~~~----------------  105 (291)
T cd07870          81 V------FEYM--------------H---T-D---------------LAQYMIQHPGGLHPYNV----------------  105 (291)
T ss_pred             E------Eecc--------------c---C-C---------------HHHHHHhCCCCCCHHHH----------------
Confidence            1      1100              0   0 0               00000 00000000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                          .                     .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       106 ----~---------------------~~~~q---i~~~L~~lH--~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~  152 (291)
T cd07870         106 ----R---------------------LFMFQ---LLRGLAYIH--GQHILHRDLKPQNLLIS---YLGELKLADFGLARA  152 (291)
T ss_pred             ----H---------------------HHHHH---HHHHHHHHH--hCCcccCCCChHHEEEc---CCCcEEEeccccccc
Confidence                0                     02233   667788888  89999999999999995   345699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc-ccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-QRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~-~~~~  364 (539)
                      ......        .....++++.|+|||++..     ...++.++|+|||||++|+|++|.+||.+.......+ ....
T Consensus       153 ~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~  219 (291)
T cd07870         153 KSIPSQ--------TYSSEVVTLWYRPPDVLLG-----ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT  219 (291)
T ss_pred             cCCCCC--------CCCCccccccccCCceeec-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence            322111        1124568999999999853     2357889999999999999999999997643210000 0000


Q ss_pred             cchhhHHHHHHHHhcC----CCCC----C---CCCCCC--CCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        365 TCHACQEILFHSIQQG----HYDF----P---EGEWST--ISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~----~~~~----p---~~~~~~--~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ....+....+..+..-    ...+    +   ...|..  .+.++.+||.+||+.||.+|||++|++.||||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            0000000000000000    0000    0   011221  26789999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-34  Score=285.71  Aligned_cols=271  Identities=22%  Similarity=0.320  Sum_probs=171.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||.+..... .....+.+|+++++.+ +||||+++++++.+....+   
T Consensus         5 ~~y~~-~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~---   79 (291)
T cd07844           5 ETYKK-LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLT---   79 (291)
T ss_pred             cceeE-EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEE---
Confidence            34554 4789999999999999999999999999864321 2234567899999987 6999999999987654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      .|      .|.+-                 +                .+...+ .....+.++.+               
T Consensus        80 lv------~e~~~-----------------~----------------~L~~~~~~~~~~~~~~~~---------------  105 (291)
T cd07844          80 LV------FEYLD-----------------T----------------DLKQYMDDCGGGLSMHNV---------------  105 (291)
T ss_pred             EE------EecCC-----------------C----------------CHHHHHHhCCCCCCHHHH---------------
Confidence            11      11110                 0                000000 00000010000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                           -.                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       106 -----~~---------------------~~~q---l~~al~~lH--~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~  151 (291)
T cd07844         106 -----RL---------------------FLFQ---LLRGLAYCH--QRRVLHRDLKPQNLLIS---ERGELKLADFGLAR  151 (291)
T ss_pred             -----HH---------------------HHHH---HHHHHHHHH--hCCeecccCCHHHEEEc---CCCCEEECcccccc
Confidence                 00                     2334   677888888  99999999999999995   34569999999986


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc-cC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ-RG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~-~~  363 (539)
                      .......        ......+++.|+|||++.+     ...|+.++|+||+||++|+|++|++||.+.......+. ..
T Consensus       152 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~  218 (291)
T cd07844         152 AKSVPSK--------TYSNEVVTLWYRPPDVLLG-----STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF  218 (291)
T ss_pred             ccCCCCc--------cccccccccccCCcHHhhc-----CcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            4332111        1123467899999999863     24578899999999999999999999976531100000 00


Q ss_pred             ccchhhHHHHHHHHhc----CCCCCCC-------CCCCCCC--HHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        364 ETCHACQEILFHSIQQ----GHYDFPE-------GEWSTIS--DEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~----~~~~~p~-------~~~~~~s--~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..........+..+..    ....++.       ..+..++  .++.+||.+||..||++|||++|+|+||||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         219 RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             HhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0000000000000000    0000000       0112345  899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.2e-33  Score=278.21  Aligned_cols=252  Identities=25%  Similarity=0.406  Sum_probs=173.1

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||++.+..+++.||+|.+.....  .....+.+|++++..+ +||||+++++.+.......    
T Consensus         2 y~~-~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~----   75 (257)
T cd08223           2 YCF-VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLL----   75 (257)
T ss_pred             ceE-EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEE----
Confidence            444 4689999999999999999999999999864322  2334577899999886 5999999998775432111    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC--CCCcccccccccccCCCCCCCCccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG--SAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g--t~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                .+           +.++  ..+.             .+...+.  ..... ||                .
T Consensus        76 ----------~l-----------v~e~--~~~~-------------~l~~~l~~~~~~~l-~~----------------~  102 (257)
T cd08223          76 ----------YI-----------VMGF--CEGG-------------DLYHKLKEQKGKLL-PE----------------N  102 (257)
T ss_pred             ----------EE-----------Eecc--cCCC-------------cHHHHHHHhcCCCC-CH----------------H
Confidence                      00           0011  0000             0000000  00000 00                0


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+..+   ++.++.++|  ++||+||||||+||++.   ..+.++|+|||++.
T Consensus       103 ~~~------------------------~~~~~---l~~~l~~lH--~~~i~H~di~p~nil~~---~~~~~~l~df~~~~  150 (257)
T cd08223         103 QVV------------------------EWFVQ---IAMALQYLH--EKHILHRDLKTQNVFLT---RTNIIKVGDLGIAR  150 (257)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--hCCeeccCCCchhEEEe---cCCcEEEecccceE
Confidence            000                        02333   667788888  99999999999999994   44669999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ...+.+|++.|+|||++.+      ..++.++|+||+||++|+|++|..||.+.+.         
T Consensus       151 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~---------  207 (257)
T cd08223         151 VLENQCD--------MASTLIGTPYYMSPELFSN------KPYNYKSDVWALGCCVYEMATLKHAFNAKDM---------  207 (257)
T ss_pred             EecccCC--------ccccccCCcCccChhHhcC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---------
Confidence            5432211        2235679999999999863      4578899999999999999999999976431         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                            ......+..+.....   ...+++++.+||.+||..||.+||++.++++||||
T Consensus       208 ------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         208 ------NSLVYRIIEGKLPPM---PKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ------HHHHHHHHhcCCCCC---ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                  223334444443211   13588999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=7.6e-34  Score=285.66  Aligned_cols=266  Identities=26%  Similarity=0.336  Sum_probs=178.5

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||.||+|.+..++..||+|++..........+.+|++++..+ +||||+++++++..+...+   
T Consensus        11 ~~~y~i-~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---   85 (292)
T cd06644          11 NEVWEI-IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLW---   85 (292)
T ss_pred             chhhhh-hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEE---
Confidence            366776 46799999999999999999999999999754433455678899999887 5999999999886554322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                       +                      +.+|--+ +              .+...           +...    ....+. ..
T Consensus        86 -l----------------------v~e~~~~-~--------------~l~~~-----------~~~~----~~~l~~-~~  111 (292)
T cd06644          86 -I----------------------MIEFCPG-G--------------AVDAI-----------MLEL----DRGLTE-PQ  111 (292)
T ss_pred             -E----------------------EEecCCC-C--------------cHHHH-----------HHhh----cCCCCH-HH
Confidence             1                      1111000 0              00000           0000    000000 00


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      +                        ..+..|   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++..
T Consensus       112 ~------------------------~~~~~q---l~~~l~~lH--~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~  159 (292)
T cd06644         112 I------------------------QVICRQ---MLEALQYLH--SMKIIHRDLKAGNVLLT---LDGDIKLADFGVSAK  159 (292)
T ss_pred             H------------------------HHHHHH---HHHHHHHHh--cCCeeecCCCcceEEEc---CCCCEEEccCcccee
Confidence            0                        003333   666777777  89999999999999994   345699999999764


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        ......|++.|+|||++.... .....|+.++|+|||||++|+|++|.+||...+.          
T Consensus       160 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----------  220 (292)
T cd06644         160 NVKTLQ--------RRDSFIGTPYWMAPEVVMCET-MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----------  220 (292)
T ss_pred             cccccc--------ccceecCCccccCceeecccc-ccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH----------
Confidence            322111        123457899999999985211 0124578899999999999999999999976431          


Q ss_pred             chhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                           ......+..... ..+.  ...++.++.+||.+||..||++||+++++++||||....+
T Consensus       221 -----~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         221 -----MRVLLKIAKSEPPTLSQ--PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             -----HHHHHHHhcCCCccCCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence                 112223332221 1111  1357889999999999999999999999999999976543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.4e-34  Score=282.60  Aligned_cols=258  Identities=26%  Similarity=0.358  Sum_probs=172.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|++..+++.||+|++..........+.+|+.++..+ +||||+++++++......+   .
T Consensus         9 ~~y~~-~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~---i   83 (267)
T cd06646           9 HDYEL-IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLW---I   83 (267)
T ss_pred             hhcch-hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEE---E
Confidence            34555 46799999999999999999999999998644333345677899999886 6999999999887654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      .|.+-                 + +              .+...           +..     ....      
T Consensus        84 v------~e~~~-----------------~-~--------------~L~~~-----------~~~-----~~~~------  103 (267)
T cd06646          84 C------MEYCG-----------------G-G--------------SLQDI-----------YHV-----TGPL------  103 (267)
T ss_pred             E------EeCCC-----------------C-C--------------cHHHH-----------HHh-----cCCC------
Confidence            1      11100                 0 0              00000           000     0000      


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       +...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       104 -~~~~~~------------------~~~~q---i~~~l~~lH--~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~  156 (267)
T cd06646         104 -SELQIA------------------YVCRE---TLQGLAYLH--SKGKMHRDIKGANILLT---DNGDVKLADFGVAAKI  156 (267)
T ss_pred             -CHHHHH------------------HHHHH---HHHHHHHHH--HCCccccCCCHHHEEEC---CCCCEEECcCccceee
Confidence             000000                  02334   667788888  89999999999999994   3456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        .....+|++.|+|||++...   ....++.++|+||+||++|+|++|.+||......+         
T Consensus       157 ~~~~~--------~~~~~~~~~~y~~PE~~~~~---~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~---------  216 (267)
T cd06646         157 TATIA--------KRKSFIGTPYWMAPEVAAVE---KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---------  216 (267)
T ss_pred             ccccc--------ccCccccCccccCHhHcccc---cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh---------
Confidence            32211        11245799999999998521   12457889999999999999999999996543211         


Q ss_pred             hhhHHHHHHHHhcCCCCCCCC-CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        367 HACQEILFHSIQQGHYDFPEG-EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~-~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                            ....+....+..+.. .-..++.++.+||++||..||++|||++++|+|+|
T Consensus       217 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         217 ------ALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             ------hheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence                  111111122222111 01246899999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=8.9e-34  Score=293.37  Aligned_cols=277  Identities=24%  Similarity=0.335  Sum_probs=174.7

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|+. .+.||+|+||.||+|.+..++..||||++.+..  ......+.+|+.++..+ +||||++++++|.......
T Consensus        14 ~~~~y~~-~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          14 VLKRYQN-LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             hhcceEE-EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCcc
Confidence            3455665 468999999999999999999999999986432  22234677899999986 6999999999886543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ..         ...++           +.+|--+                .+...+..                  ..  
T Consensus        92 ~~---------~~~~l-----------v~e~~~~----------------~l~~~~~~------------------~l--  115 (353)
T cd07850          92 EF---------QDVYL-----------VMELMDA----------------NLCQVIQM------------------DL--  115 (353)
T ss_pred             cc---------CcEEE-----------EEeccCC----------------CHHHHHhh------------------cC--
Confidence            00         00011           1111000                00000000                  00  


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        +.-.+..                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       116 --~~~~~~~---------------------~~~q---l~~aL~~LH--~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg~  164 (353)
T cd07850         116 --DHERMSY---------------------LLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVK---SDCTLKILDFGL  164 (353)
T ss_pred             --CHHHHHH---------------------HHHH---HHHHHHHHH--hCCeeeCCCCHHHEEEC---CCCCEEEccCcc
Confidence              0000000                     2233   667788888  89999999999999994   445699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         ...+..||+.|+|||++.+      ..|+.++|+|||||++|+|++|+.||.+.+..+.....
T Consensus       165 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~  229 (353)
T cd07850         165 ARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKI  229 (353)
T ss_pred             ceeCCCCC---------CCCCCcccccccCHHHHhC------CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            87543211         1234578999999999863      56889999999999999999999999865421100000


Q ss_pred             CccchhhHHHHHHH-------HhcCCC--------------CCCCC---CCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        363 GETCHACQEILFHS-------IQQGHY--------------DFPEG---EWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       363 ~~~~~~~~~~~~~~-------i~~~~~--------------~~p~~---~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                      ......+.......       ......              .++..   .+...++++++||.+||+.||++|||+.|+|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL  309 (353)
T cd07850         230 IEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL  309 (353)
T ss_pred             HHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh
Confidence            00000000000000       000000              01100   0223567899999999999999999999999


Q ss_pred             cCCCccC
Q psy16343        419 KHPWIST  425 (539)
Q Consensus       419 ~Hpw~~~  425 (539)
                      .||||..
T Consensus       310 ~~~~~~~  316 (353)
T cd07850         310 QHPYINV  316 (353)
T ss_pred             cChhHhh
Confidence            9999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=6.7e-34  Score=287.17  Aligned_cols=261  Identities=27%  Similarity=0.389  Sum_probs=178.7

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ....|.+ .+.||+|+||.||+|.+..++..||+|.+..........+.+|+.++..+ +||||+++++++..+...+  
T Consensus        17 ~~~~y~~-~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~--   92 (297)
T cd06656          17 PKKKYTR-FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW--   92 (297)
T ss_pred             hhhhcee-eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEE--
Confidence            3455665 46799999999999999999999999999754444456678899999886 6999999999987654332  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      .|.+-                 + +              .+...+.. ..+.                   
T Consensus        93 -lv------~e~~~-----------------~-~--------------~L~~~~~~-~~~~-------------------  113 (297)
T cd06656          93 -VV------MEYLA-----------------G-G--------------SLTDVVTE-TCMD-------------------  113 (297)
T ss_pred             -Ee------ecccC-----------------C-C--------------CHHHHHHh-CCCC-------------------
Confidence             11      11100                 0 0              00000000 0000                   


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                       ...+--                     +..+   ++.++.|+|  +.||+||||||+|||+.   ..+.+||+|||++.
T Consensus       114 -~~~~~~---------------------~~~~---l~~~L~~LH--~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~  163 (297)
T cd06656         114 -EGQIAA---------------------VCRE---CLQALDFLH--SNQVIHRDIKSDNILLG---MDGSVKLTDFGFCA  163 (297)
T ss_pred             -HHHHHH---------------------HHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEECcCccce
Confidence             000000                     2223   556677777  99999999999999994   34569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ......|++.|+|||.+.+      ..++.++|+||+||++|+|++|.+||.+.+...       
T Consensus       164 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-------  222 (297)
T cd06656         164 QITPEQS--------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------  222 (297)
T ss_pred             EccCCcc--------CcCcccCCccccCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-------
Confidence            5432221        1224579999999999863      457889999999999999999999997654221       


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                             .+......+.....  ....++..+++||.+||..||++||+++++++||||.....
T Consensus       223 -------~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         223 -------ALYLIATNGTPELQ--NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             -------heeeeccCCCCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence                   11111111211111  11357899999999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=9.1e-34  Score=286.08  Aligned_cols=255  Identities=27%  Similarity=0.409  Sum_probs=177.1

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |++ .+.||.|+||.||+|.+..+++.||+|.+..........+.+|+.++..+ +||||+++++++.++...+   .| 
T Consensus        21 y~~-~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv-   94 (296)
T cd06655          21 YTR-YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELF---VV-   94 (296)
T ss_pred             EEE-EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEE---EE-
Confidence            444 46799999999999999999999999999754444456788899999887 5999999999987654322   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                            .++--+ +              .+...+.. ..+..+..                   
T Consensus        95 ----------------------~e~~~~-~--------------~L~~~~~~-~~l~~~~~-------------------  117 (296)
T cd06655          95 ----------------------MEYLAG-G--------------SLTDVVTE-TCMDEAQI-------------------  117 (296)
T ss_pred             ----------------------EEecCC-C--------------cHHHHHHh-cCCCHHHH-------------------
Confidence                                  111000 0              00000000 00000000                   


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                          +                  .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++.....
T Consensus       118 ----~------------------~i~~~---l~~al~~LH--~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655         118 ----A------------------AVCRE---CLQALEFLH--ANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             ----H------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEEccCccchhccc
Confidence                0                  02223   567778888  99999999999999994   345699999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ...        .....+|++.|+|||.+..      ..++.++|+||+||++|+|++|.+||.+.+..            
T Consensus       168 ~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~------------  221 (296)
T cd06655         168 EQS--------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------------  221 (296)
T ss_pred             ccc--------cCCCcCCCccccCcchhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------------
Confidence            211        1224579999999999853      45788999999999999999999999775321            


Q ss_pred             hHHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        369 CQEILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       369 ~~~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                        ... ..+.. ....+.  .+..+++.+++||++||..||.+||++.+++.||||....
T Consensus       222 --~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         222 --RAL-YLIATNGTPELQ--NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             --HHH-HHHHhcCCcccC--CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence              111 12222 211111  2346899999999999999999999999999999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0574|consensus

Probab=100.00  E-value=1.1e-36  Score=288.54  Aligned_cols=265  Identities=23%  Similarity=0.340  Sum_probs=183.7

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ..+..-+++|.+. +.||+|+||.||+|.++.+|..+|||.+...  ...+.+.+||.+|++|. .|.+|+++..|-...
T Consensus        26 sL~K~PEEVFDi~-~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~s  101 (502)
T KOG0574|consen   26 ALNKPPEEVFDIV-GKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHS  101 (502)
T ss_pred             hhcCChHHHHHHH-HHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcC-CchhhhhhhhhccCC
Confidence            3444456677764 4689999999999999999999999998642  34678999999999994 999999997553222


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ...   .|      +|.+=                -| .+.               +.+...       .+.+.+.+   
T Consensus       102 DLW---IV------MEYCG----------------AG-SiS---------------DI~R~R-------~K~L~E~E---  130 (502)
T KOG0574|consen  102 DLW---IV------MEYCG----------------AG-SIS---------------DIMRAR-------RKPLSEQE---  130 (502)
T ss_pred             ceE---ee------hhhcC----------------CC-cHH---------------HHHHHh-------cCCccHHH---
Confidence            211   11      22221                01 000               000000       00000000   


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                                                    -..+.+.   -+.++.|+|  ...=||||||.-|||+.   ..+..||+|
T Consensus       131 ------------------------------Is~iL~~---TLKGL~YLH--~~~KIHRDIKAGNILLN---T~G~AKLAD  172 (502)
T KOG0574|consen  131 ------------------------------ISAVLRD---TLKGLQYLH--DLKKIHRDIKAGNILLN---TDGIAKLAD  172 (502)
T ss_pred             ------------------------------HHHHHHH---HHhHHHHHH--HHHHHHhhcccccEEEc---ccchhhhhh
Confidence                                          0002222   456788999  66679999999999995   445689999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||.|..+...-.        .-.|..|||.||||||+..      -+|+..+||||||+...+|..|+||+..-.+.   
T Consensus       173 FGVAGQLTDTMA--------KRNTVIGTPFWMAPEVI~E------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---  235 (502)
T KOG0574|consen  173 FGVAGQLTDTMA--------KRNTVIGTPFWMAPEVIEE------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---  235 (502)
T ss_pred             ccccchhhhhHH--------hhCccccCcccccHHHHHH------hccchhhhHhhhcchhhhhhcCCCCccccccc---
Confidence            999876543211        2357899999999999973      58999999999999999999999999754321   


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                                 ..+|....+.++.|..++  ..|+++-|||++||.++|++|-||-++++|||++++.
T Consensus       236 -----------RAIFMIPT~PPPTF~KPE--~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  236 -----------RAIFMIPTKPPPTFKKPE--EWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             -----------ceeEeccCCCCCCCCChH--hhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence                       123322334444444321  3488999999999999999999999999999998654

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=2.2e-33  Score=280.56  Aligned_cols=267  Identities=24%  Similarity=0.346  Sum_probs=174.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      ..|++ .+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.++.++.+||||+++++++........   
T Consensus        16 ~~~~~-~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~---   90 (282)
T cd06636          16 GIFEL-VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH---   90 (282)
T ss_pred             hhhhh-heeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC---
Confidence            34554 367999999999999999999999999986532 2345677899999988789999999998854211000   


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                             ...+.          -+.++--+ +              .+...           +...   ......   .-
T Consensus        91 -------~~~~~----------iv~e~~~~-~--------------~L~~~-----------~~~~---~~~~~~---~~  121 (282)
T cd06636          91 -------DDQLW----------LVMEFCGA-G--------------SVTDL-----------VKNT---KGNALK---ED  121 (282)
T ss_pred             -------CCEEE----------EEEEeCCC-C--------------cHHHH-----------HHHc---cCCCCC---HH
Confidence                   00000          11111000 0              00000           0000   000000   00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |                      ...+..|   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++...
T Consensus       122 ~----------------------~~~~~~q---i~~al~~LH--~~~ivH~dl~~~nili~---~~~~~~l~dfg~~~~~  171 (282)
T cd06636         122 W----------------------IAYICRE---ILRGLAHLH--AHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQL  171 (282)
T ss_pred             H----------------------HHHHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEEeeCcchhhh
Confidence            0                      0013334   677788888  89999999999999995   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ...+.+|++.|+|||++.... .....|+.++|+|||||++|+|++|.+||.....           
T Consensus       172 ~~~~~--------~~~~~~~~~~y~aPE~l~~~~-~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~-----------  231 (282)
T cd06636         172 DRTVG--------RRNTFIGTPYWMAPEVIACDE-NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP-----------  231 (282)
T ss_pred             hcccc--------CCCcccccccccCHhhcCccc-CcCcCCCcccchhHHHHHHHHHHhCCCCccccCH-----------
Confidence            32111        123568999999999985311 1124688899999999999999999999975421           


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                         .+.+............   ...++.++.+||.+||..||.+||++.|+|+||||
T Consensus       232 ---~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         232 ---MRALFLIPRNPPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ---HhhhhhHhhCCCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence               1112211111122222   23578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.6e-33  Score=278.94  Aligned_cols=253  Identities=28%  Similarity=0.420  Sum_probs=172.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---------HHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---------RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---------~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +..||+|+||.||+|.+..++..||+|.+.......         ...+.+|++++.++ +||||+++++++.+....+ 
T Consensus         5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   82 (267)
T cd06628           5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDADHLN-   82 (267)
T ss_pred             cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCccE-
Confidence            578999999999999999899999999886432211         13567899999987 5999999999887654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .+      .|.+-                 + +              .+...+.....+. +                
T Consensus        83 --lv------~e~~~-----------------~-~--------------~L~~~l~~~~~l~-~----------------  105 (267)
T cd06628          83 --IF------LEYVP-----------------G-G--------------SVAALLNNYGAFE-E----------------  105 (267)
T ss_pred             --EE------EEecC-----------------C-C--------------CHHHHHHhccCcc-H----------------
Confidence              11      11100                 0 0              0000000000000 0                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       106 ~~~~------------------------~~~~~---l~~~l~~lH--~~~ivH~di~p~nil~~---~~~~~~l~dfg~~  153 (267)
T cd06628         106 TLVR------------------------NFVRQ---ILKGLNYLH--NRGIIHRDIKGANILVD---NKGGIKISDFGIS  153 (267)
T ss_pred             HHHH------------------------HHHHH---HHHHHHHHH--hcCcccccCCHHHEEEc---CCCCEEecccCCC
Confidence            0000                        13334   677888888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +....+.....  .........|++.|+|||++..      ..++.++|+||+||++|+|++|+.||.+.+.        
T Consensus       154 ~~~~~~~~~~~--~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------  217 (267)
T cd06628         154 KKLEANSLSTK--TNGARPSLQGSVFWMAPEVVKQ------TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--------  217 (267)
T ss_pred             cccccccccCC--ccccccccCCCcCccChhHhcc------CCCCchhhhHHHHHHHHHHhhCCCCCCCccH--------
Confidence            76543211100  0111234679999999999863      4578899999999999999999999976421        


Q ss_pred             ccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        364 ETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                            ...+ ..+... ...+|    ..++.++++||++||+.||.+||+++|+++||||
T Consensus       218 ------~~~~-~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         218 ------LQAI-FKIGENASPEIP----SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ------HHHH-HHHhccCCCcCC----cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence                  1112 222222 22333    3578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0671|consensus

Probab=100.00  E-value=1.3e-35  Score=290.42  Aligned_cols=264  Identities=23%  Similarity=0.413  Sum_probs=174.2

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCC-C----Ceeeeeeeecccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH-P----NIIQLLEYYEDDE  119 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~H-p----nIv~l~~~~~~~~  119 (539)
                      +...|++. ..+|+|+||+|.+|.+..++..||||+|+... ..++...-|+++|.++..+ |    -+|++.+||+-..
T Consensus        87 l~~Ry~i~-~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg  164 (415)
T KOG0671|consen   87 LTNRYEIV-DLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG  164 (415)
T ss_pred             cccceehh-hhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence            45556653 57999999999999999999999999996432 2345566789999987433 2    3677878775432


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEe-ccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCD-FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~D-fgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...    |          +            .| +|.                 .+++.+....|.+             
T Consensus       165 hiC----i----------v------------fellG~-----------------S~~dFlk~N~y~~-------------  188 (415)
T KOG0671|consen  165 HIC----I----------V------------FELLGL-----------------STFDFLKENNYIP-------------  188 (415)
T ss_pred             ceE----E----------E------------EeccCh-----------------hHHHHhccCCccc-------------
Confidence            111    0          1            00 110                 0111111111211             


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC--------
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD--------  270 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~--------  270 (539)
                                              |+..-...  +-.|   ++.++.|+|  +.+++|-||||||||+.+.+        
T Consensus       189 ------------------------fpi~~ir~--m~~Q---L~~sv~fLh--~~kl~HTDLKPENILfvss~~~~~~~~k  237 (415)
T KOG0671|consen  189 ------------------------FPIDHIRH--MGYQ---LLESVAFLH--DLKLTHTDLKPENILFVSSEYFKTYNPK  237 (415)
T ss_pred             ------------------------cchHHHHH--HHHH---HHHHHHHHH--hcceeecCCChheEEEeccceEEEeccC
Confidence                                    11100000  1123   677889999  99999999999999996531        


Q ss_pred             ---------CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHH
Q psy16343        271 ---------QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY  341 (539)
Q Consensus       271 ---------~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily  341 (539)
                               ....|||+|||-|+.....           -.+.+-|.+|+||||+.+      -+++.+||+||+||||+
T Consensus       238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----------hs~iVsTRHYRAPEViLg------LGwS~pCDvWSiGCIL~  300 (415)
T KOG0671|consen  238 KKVCFIRPLKSTAIKVIDFGSATFDHEH-----------HSTIVSTRHYRAPEVILG------LGWSQPCDVWSIGCILV  300 (415)
T ss_pred             CccceeccCCCcceEEEecCCcceeccC-----------cceeeeccccCCchheec------cCcCCccCceeeeeEEE
Confidence                     1245899999988743221           236789999999999985      47899999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhc------------------CCCCCCCCCC--------------
Q psy16343        342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ------------------GHYDFPEGEW--------------  389 (539)
Q Consensus       342 ~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~------------------~~~~~p~~~~--------------  389 (539)
                      ||.+|...|++....+            .-.++++|..                  +.+++|+..-              
T Consensus       301 ElytG~~LFqtHen~E------------HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl  368 (415)
T KOG0671|consen  301 ELYTGETLFQTHENLE------------HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPL  368 (415)
T ss_pred             EeeccceecccCCcHH------------HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccH
Confidence            9999999999865221            0112222221                  2222222100              


Q ss_pred             ----CCC---CHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        390 ----STI---SDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       390 ----~~~---s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                          ...   -.++.|||++||..||.+|+|+.|+|.||||+..
T Consensus       369 ~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  369 KKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             HHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence                001   1357899999999999999999999999999754

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=9.5e-34  Score=282.79  Aligned_cols=268  Identities=24%  Similarity=0.357  Sum_probs=170.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||.||+|.+..++..||+|++.+.. ........+|+.++.++.+||||+++++++.+......  .+    
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~--~l----   77 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRL--AL----   77 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcE--EE----
Confidence            356899999999999999999999999986532 22233456899999888789999999998876521110  01    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                        +.++--+                .+...           +..    ..... ...+++   .
T Consensus        78 ------------------v~e~~~~----------------~l~~~-----------l~~----~~~~~-~~~~~~---~  104 (282)
T cd07831          78 ------------------VFELMDM----------------NLYEL-----------IKG----RKRPL-PEKRVK---S  104 (282)
T ss_pred             ------------------EEecCCc----------------cHHHH-----------HHh----ccCCC-CHHHHH---H
Confidence                              1111000                00000           000    00000 000000   0


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                           +..+   ++.++.|+|  ++||+||||||+||++..    +.+||+|||++....... 
T Consensus       105 ---------------------~~~q---i~~~L~~LH--~~~i~H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~-  153 (282)
T cd07831         105 ---------------------YMYQ---LLKSLDHMH--RNGIFHRDIKPENILIKD----DILKLADFGSCRGIYSKP-  153 (282)
T ss_pred             ---------------------HHHH---HHHHHHHHH--HCCceecccCHHHEEEcC----CCeEEEecccccccccCC-
Confidence                                 2223   667777888  999999999999999954    679999999987543221 


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              ......+|+.|+|||++..     ...++.++|+||+||++|+|++|.+||.+.+..+..............
T Consensus       154 --------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~  220 (282)
T cd07831         154 --------PYTEYISTRWYRAPECLLT-----DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDA  220 (282)
T ss_pred             --------CcCCCCCCcccCChhHhhc-----CCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCH
Confidence                    1224568999999998752     234678999999999999999999999876432100000000000000


Q ss_pred             HHHHHHh---cCCCCCCCCCC-------CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        372 ILFHSIQ---QGHYDFPEGEW-------STISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       372 ~~~~~i~---~~~~~~p~~~~-------~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      .......   ...+.+|....       ..++.++++||.+||.+||++||+++++++||||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         221 EVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            0111111   11223332211       2468999999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.6e-34  Score=286.11  Aligned_cols=265  Identities=25%  Similarity=0.340  Sum_probs=175.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|++ .+.||+|+||.||+|.+..++..||+|.+.... ......+.+|+++++++ +||||+++++++......+   .
T Consensus         2 ~~~~-~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---l   76 (286)
T cd06622           2 EIEV-LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVY---M   76 (286)
T ss_pred             hhhh-hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEE---E
Confidence            3554 467999999999999999999999999886432 22235688999999987 6999999999887654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      .|.+-                 + +              .+..      |     +....  .....+    .
T Consensus        77 v------~e~~~-----------------~-~--------------~l~~------~-----~~~~~--~~~~~~----~  101 (286)
T cd06622          77 C------MEYMD-----------------A-G--------------SLDK------L-----YAGGV--ATEGIP----E  101 (286)
T ss_pred             E------EeecC-----------------C-C--------------CHHH------H-----HHhcc--ccCCCC----H
Confidence            1      11110                 0 0              0000      0     00000  000000    0


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      -.+-.                     +..+   ++.++.|+|  . .||+||||||+|||+..   .+.+||+|||++..
T Consensus       102 ~~~~~---------------------~~~~---i~~~l~~LH--~~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~  152 (286)
T cd06622         102 DVLRR---------------------ITYA---VVKGLKFLK--EEHNIIHRDVKPTNVLVNG---NGQVKLCDFGVSGN  152 (286)
T ss_pred             HHHHH---------------------HHHH---HHHHHHHHH--hcCCEeeCCCCHHHEEECC---CCCEEEeecCCccc
Confidence            00000                     2223   566777887  5 59999999999999954   45699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ....          ...+.+|++.|+|||++.+........|+.++|+||+||++|+|++|..||.......        
T Consensus       153 ~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--------  214 (286)
T cd06622         153 LVAS----------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--------  214 (286)
T ss_pred             ccCC----------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--------
Confidence            4221          1235678999999999853211112347889999999999999999999997542110        


Q ss_pred             chhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        366 CHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                          .......+..+. ..+|    ..++.++.+||.+||..||++||++++++.||||....
T Consensus       215 ----~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         215 ----IFAQLSAIVDGDPPTLP----SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             ----HHHHHHHHhhcCCCCCC----cccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence                011122333332 2233    35899999999999999999999999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.8e-34  Score=286.73  Aligned_cols=253  Identities=24%  Similarity=0.392  Sum_probs=177.5

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK  133 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK  133 (539)
                      ..||+|+||.||+|.+..++..||||.++.........+.+|+.++..+ +||||+++++++..+...+   .|      
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~---iv------   96 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELW---VL------   96 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEE---EE------
Confidence            3689999999999999999999999999654444456788999999887 5999999999887654332   11      


Q ss_pred             CCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHH
Q psy16343        134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       134 ~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil  213 (539)
                                       .++  ..+.             .+...+..                 ...+ ...++.     
T Consensus        97 -----------------~e~--~~~~-------------~L~~~~~~-----------------~~~~-~~~~~~-----  121 (297)
T cd06659          97 -----------------MEF--LQGG-------------ALTDIVSQ-----------------TRLN-EEQIAT-----  121 (297)
T ss_pred             -----------------Eec--CCCC-------------CHHHHHhh-----------------cCCC-HHHHHH-----
Confidence                             111  0000             00000000                 0000 001111     


Q ss_pred             HHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC
Q psy16343        214 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH  293 (539)
Q Consensus       214 ~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~  293 (539)
                                         +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..+.....  
T Consensus       122 -------------------~~~q---i~~~L~~LH--~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~~~~~~~~~--  172 (297)
T cd06659         122 -------------------VCES---VLQALCYLH--SQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP--  172 (297)
T ss_pred             -------------------HHHH---HHHHHHHHH--hCCeecCCCCHHHeEEc---cCCcEEEeechhHhhcccccc--
Confidence                               2333   667788888  99999999999999994   446799999999865432211  


Q ss_pred             CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHH
Q psy16343        294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL  373 (539)
Q Consensus       294 ~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~  373 (539)
                            .....+|++.|+|||++.+      ..++.++|+||+||++|+|++|++||...+.               ...
T Consensus       173 ------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---------------~~~  225 (297)
T cd06659         173 ------KRKSLVGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---------------VQA  225 (297)
T ss_pred             ------cccceecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------------HHH
Confidence                  1234679999999999863      4578899999999999999999999976431               122


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       374 ~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ...+........ ..+..++.++.+||.+||+.||++||+++++++||||.....
T Consensus       226 ~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         226 MKRLRDSPPPKL-KNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             HHHHhccCCCCc-cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence            333433322211 224567899999999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=9.5e-34  Score=285.56  Aligned_cols=261  Identities=26%  Similarity=0.364  Sum_probs=172.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-----CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-----~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|.+..+++.||||.+......     ....+..|++++..+ +|+||+++++++.+....+    +
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~----l   79 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNIN----L   79 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEE----E
Confidence            46799999999999999999999999999653321     233466799999887 5999999999987743322    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            +.+|- . +              .+...+....               .    ..+..
T Consensus        80 ----------------------v~e~~-~-~--------------~L~~~i~~~~---------------~----~~~~~  102 (298)
T cd07841          80 ----------------------VFEFM-E-T--------------DLEKVIKDKS---------------I----VLTPA  102 (298)
T ss_pred             ----------------------EEccc-C-C--------------CHHHHHhccC---------------C----CCCHH
Confidence                                  11111 0 0              0000000000               0    00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      .+.                     .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++....
T Consensus       103 ~~~---------------------~~~~q---i~~al~~lH--~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~~~~  153 (298)
T cd07841         103 DIK---------------------SYMLM---TLRGLEYLH--SNWILHRDLKPNNLLIA---SDGVLKLADFGLARSFG  153 (298)
T ss_pred             HHH---------------------HHHHH---HHHHHHHHH--hCCeeecCCChhhEEEc---CCCCEEEccceeeeecc
Confidence            000                     03334   677788888  89999999999999995   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        ......+++.|+|||++.+     ...|+.++|+||+||++|+|++|.+||.+.+..+.         
T Consensus       154 ~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~---------  211 (298)
T cd07841         154 SPNR--------KMTHQVVTRWYRAPELLFG-----ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ---------  211 (298)
T ss_pred             CCCc--------cccccccceeeeCHHHHhC-----CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH---------
Confidence            2211        1223467889999998853     24578899999999999999999999987543210         


Q ss_pred             hhHHHHHHHHhc-------------------CCCCCC-CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        368 ACQEILFHSIQQ-------------------GHYDFP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       368 ~~~~~~~~~i~~-------------------~~~~~p-~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                        ...+...+..                   .....+ ...+..++.++++||.+||.+||++|||++|+|+||||.+..
T Consensus       212 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         212 --LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             --HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence              0001100000                   000000 012345688999999999999999999999999999998764


Q ss_pred             C
Q psy16343        428 T  428 (539)
Q Consensus       428 ~  428 (539)
                      .
T Consensus       290 ~  290 (298)
T cd07841         290 A  290 (298)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG4645|consensus

Probab=100.00  E-value=3e-35  Score=323.12  Aligned_cols=258  Identities=26%  Similarity=0.395  Sum_probs=184.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      +..||.|.||.||.|.+..||+..|||-|.-...  .....+.+|..+|..+ +|||||+++.+=            +||
T Consensus      1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVE------------vHR 1306 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-NHPNLVRYYGVE------------VHR 1306 (1509)
T ss_pred             ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-cCccccccCcee------------ecH
Confidence            5679999999999999999999999998864332  2224567888888875 699999987532            455


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                      +.-  ||..         -+|+-|.-                                               .|+-..|
T Consensus      1307 ekv--~IFM---------EyC~~GsL-----------------------------------------------a~ll~~g 1328 (1509)
T KOG4645|consen 1307 EKV--YIFM---------EYCEGGSL-----------------------------------------------ASLLEHG 1328 (1509)
T ss_pred             HHH--HHHH---------HHhccCcH-----------------------------------------------HHHHHhc
Confidence            421  1211         01111100                                               0000111


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      -+.=|+++-.            +..|   ++.+++|+|  +.|||||||||+||++.   ..|-||+.|||-|..+..+.
T Consensus      1329 ri~dE~vt~v------------yt~q---ll~gla~LH--~~gIVHRDIK~aNI~Ld---~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1329 RIEDEMVTRV------------YTKQ---LLEGLAYLH--EHGIVHRDIKPANILLD---FNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             chhhhhHHHH------------HHHH---HHHHHHHHH--hcCceecCCCccceeee---cCCcEEeecccceeEecCch
Confidence            1111222211            3334   778899999  99999999999999994   45679999999998776542


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .    ...+.+....|||.|||||++.+.   ...|...+.|||||||++.||+||+-||..-+.              .
T Consensus      1389 ~----~~~~el~~~~GT~~YMAPEvit~t---~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--------------e 1447 (1509)
T KOG4645|consen 1389 Q----TMPGELQSMMGTPMYMAPEVITGT---KGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--------------E 1447 (1509)
T ss_pred             h----cCCHHHHhhcCCchhcCchhhccc---ccCCCCcchhhhcccceEEEeecCCCchhhccc--------------h
Confidence            1    122456788999999999999753   346788899999999999999999999975321              1


Q ss_pred             HHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        371 EILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       371 ~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ..++-.+-. -.+.+|+    .+|.+.+|||.+||+.||++|+++.|+|.|.|-...
T Consensus      1448 ~aIMy~V~~gh~Pq~P~----~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1448 WAIMYHVAAGHKPQIPE----RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             hHHHhHHhccCCCCCch----hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence            234444444 4577776    499999999999999999999999999999987643

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.7e-33  Score=290.01  Aligned_cols=294  Identities=21%  Similarity=0.269  Sum_probs=179.6

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +...|.+ .+.||.|+||.||+|.+..++..||+|++..........+.+|+++++.+ +||||+++++++.........
T Consensus         3 ~~~~y~~-~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           3 LGSRYMD-LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             cCcceEE-EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-CCCcchhhHhhhccccccccc
Confidence            4456665 57899999999999999999999999999655545556788999999987 699999999887654321100


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                            +++   .            +.+++                          ..|+..|...             .
T Consensus        81 ------~~~---~------------~~~~~--------------------------~~~lv~e~~~-------------~  100 (342)
T cd07854          81 ------DVG---S------------LTELN--------------------------SVYIVQEYME-------------T  100 (342)
T ss_pred             ------ccc---c------------ccccc--------------------------eEEEEeeccc-------------c
Confidence                  000   0            00000                          0000000000             0


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      +       +...+... ++.  ......+..|   ++.++.|+|  ++||+||||||+|||+..++  ..+||+|||+++
T Consensus       101 ~-------L~~~~~~~-~l~--~~~~~~~~~q---i~~aL~~LH--~~givH~dikp~Nili~~~~--~~~kl~dfg~~~  163 (342)
T cd07854         101 D-------LANVLEQG-PLS--EEHARLFMYQ---LLRGLKYIH--SANVLHRDLKPANVFINTED--LVLKIGDFGLAR  163 (342)
T ss_pred             c-------HHHHHHcC-CCC--HHHHHHHHHH---HHHHHHHHH--hCCcccCCCCHHHEEEcCCC--ceEEECCcccce
Confidence            0       00000000 000  0001113444   778888888  99999999999999995432  458999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ........     .......+||..|+|||++..     ...|+.++|+|||||++|+|++|..||.+.+..+.......
T Consensus       164 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~  233 (342)
T cd07854         164 IVDPHYSH-----KGYLSEGLVTKWYRSPRLLLS-----PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE  233 (342)
T ss_pred             ecCCcccc-----ccccccccccccccCHHHHhC-----ccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            54221110     001123468999999998753     24588899999999999999999999976542110000000


Q ss_pred             cc----hhhHHHH----HHHHh--cCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        365 TC----HACQEIL----FHSIQ--QGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       365 ~~----~~~~~~~----~~~i~--~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..    .......    ...+.  ......+. .....++.++++||.+||+.||.+|||++|+++||||....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence            00    0000000    00000  00011110 00135789999999999999999999999999999997543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=6.9e-34  Score=286.42  Aligned_cols=261  Identities=23%  Similarity=0.368  Sum_probs=179.1

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+.+.|.. ...||+|+||.||++.+..++..||||.+..........+.+|+.++..+ +||||+++++.+..+...+ 
T Consensus        19 ~~~~~~~~-~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~-   95 (292)
T cd06658          19 DPREYLDS-FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELW-   95 (292)
T ss_pred             chHHHHhh-hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEE-
Confidence            34455553 45799999999999999999999999998654433455678899999886 6999999999886654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .                       +.+|.-+ +              .+..      +     +..      ...+. 
T Consensus        96 --l-----------------------v~e~~~~-~--------------~L~~------~-----~~~------~~l~~-  117 (292)
T cd06658          96 --V-----------------------VMEFLEG-G--------------ALTD------I-----VTH------TRMNE-  117 (292)
T ss_pred             --E-----------------------EEeCCCC-C--------------cHHH------H-----Hhc------CCCCH-
Confidence              1                       1111000 0              0000      0     000      00000 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..+                        ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++
T Consensus       118 ~~~------------------------~~~~~q---i~~~l~~LH--~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~  165 (292)
T cd06658         118 EQI------------------------ATVCLS---VLRALSYLH--NQGVIHRDIKSDSILLT---SDGRIKLSDFGFC  165 (292)
T ss_pred             HHH------------------------HHHHHH---HHHHHHHHH--HCCEeecCCCHHHEEEc---CCCCEEEccCcch
Confidence            000                        012333   667788888  89999999999999994   3456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........        ...+.+||+.|+|||++.+      ..++.++|+||+||++|+|++|..||.+.+.        
T Consensus       166 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------  223 (292)
T cd06658         166 AQVSKEVP--------KRKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--------  223 (292)
T ss_pred             hhcccccc--------cCceeecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------
Confidence            65432211        1235679999999999853      4578899999999999999999999976431        


Q ss_pred             ccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                             ...+..+.... ..++.  ...++..+++||.+||..||.+|||++|+++||||.....
T Consensus       224 -------~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         224 -------LQAMRRIRDNLPPRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             -------HHHHHHHHhcCCCcccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCC
Confidence                   11223333221 11111  1357899999999999999999999999999999986544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=7.7e-34  Score=284.02  Aligned_cols=257  Identities=28%  Similarity=0.433  Sum_probs=173.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|.+..+|..||||++....  ......+.+|+.+++.+ +||||+++++++.++...+   .
T Consensus         2 y~~-~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---~   76 (286)
T cd07832           2 YKI-LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFV---L   76 (286)
T ss_pred             ceE-EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeE---E
Confidence            444 467999999999999999999999999986543  22345788999999987 5999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .+|- + +              .+...+...               ...+. ...+
T Consensus        77 v-----------------------~e~~-~-~--------------~L~~~~~~~---------------~~~~~-~~~~  101 (286)
T cd07832          77 V-----------------------MEYM-P-S--------------DLSEVLRDE---------------ERPLP-EAQV  101 (286)
T ss_pred             E-----------------------eccc-C-C--------------CHHHHHHhc---------------CCCCC-HHHH
Confidence            1                       1110 0 0              000000000               00000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +                        .+..+   ++.++.|+|  ++||+||||||+||++..   .+.++|+|||++...
T Consensus       102 ~------------------------~~~~~---i~~~l~~lH--~~~i~H~dl~p~ni~~~~---~~~~~l~dfg~~~~~  149 (286)
T cd07832         102 K------------------------SYMRM---LLKGVAYMH--ANGIMHRDLKPANLLISA---DGVLKIADFGLARLF  149 (286)
T ss_pred             H------------------------HHHHH---HHHHHHHHH--HCCeecCCcCHHHEEEcC---CCcEEEeeeeecccc
Confidence            0                        02334   667788888  899999999999999954   456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....       ......+||+.|+|||++..     ...++.++||||+||++|+|++|.+||.+.+...         
T Consensus       150 ~~~~~-------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---------  208 (286)
T cd07832         150 SEEEP-------RLYSHQVATRWYRAPELLYG-----ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE---------  208 (286)
T ss_pred             cCCCC-------CccccccCcccccCceeeec-----cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH---------
Confidence            32211       01234579999999998753     2457889999999999999999999997654211         


Q ss_pred             hhhHHHHHHHHhc-------------------CCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQ-------------------GHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~-------------------~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                            .+..+..                   +...++.       ..+...+.++.+||++||..||.+|||++++|+|
T Consensus       209 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         209 ------QLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             ------HHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                  1111100                   0111111       1123567999999999999999999999999999


Q ss_pred             CCcc
Q psy16343        421 PWIS  424 (539)
Q Consensus       421 pw~~  424 (539)
                      |||.
T Consensus       283 ~~~~  286 (286)
T cd07832         283 PYFT  286 (286)
T ss_pred             cCcC
Confidence            9984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.1e-34  Score=283.11  Aligned_cols=263  Identities=29%  Similarity=0.350  Sum_probs=178.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++. +.||.|+||.||++.+..++..||+|++..........+.+|++++.++. ||||+++++++......+   .
T Consensus         5 ~~~~i~-~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~---l   79 (280)
T cd06611           5 DIWEII-GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLW---I   79 (280)
T ss_pred             hHHHHH-HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEE---E
Confidence            446653 56999999999999998899999999986443333456788999999975 999999999887654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-                 + +              .+...+..        .       ....+     
T Consensus        80 v------~e~~~-----------------~-~--------------~L~~~~~~--------~-------~~~l~-----  101 (280)
T cd06611          80 L------IEFCD-----------------G-G--------------ALDSIMLE--------L-------ERGLT-----  101 (280)
T ss_pred             E------eeccC-----------------C-C--------------cHHHHHHH--------h-------cCCCC-----
Confidence            1      11100                 0 0              00000000        0       00000     


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                        ...+                  ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++...
T Consensus       102 --~~~~------------------~~~~~q---l~~~l~~lh--~~~i~h~dl~p~nili~---~~~~~~l~d~g~~~~~  153 (280)
T cd06611         102 --EPQI------------------RYVCRQ---MLEALNFLH--SHKVIHRDLKAGNILLT---LDGDVKLADFGVSAKN  153 (280)
T ss_pred             --HHHH------------------HHHHHH---HHHHHHHHH--HCCcccCCCChhhEEEC---CCCCEEEccCccchhh
Confidence              0000                  012333   667777888  99999999999999994   4456999999987644


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        .....+||+.|+|||++.... .....++.++|+||+||++|+|++|.+||.+.+.           
T Consensus       154 ~~~~~--------~~~~~~~~~~y~~PE~~~~~~-~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----------  213 (280)
T cd06611         154 KSTLQ--------KRDTFIGTPYWMAPEVVACET-FKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----------  213 (280)
T ss_pred             ccccc--------ccceeecchhhcCHHHHhhcc-cCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----------
Confidence            32111        123467999999999985211 0124578899999999999999999999976431           


Q ss_pred             hhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        367 HACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                          ......+..+.. .+..  ...++.++.+||.+||..||.+||+++++++||||...
T Consensus       214 ----~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         214 ----MRVLLKILKSEPPTLDQ--PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             ----HHHHHHHhcCCCCCcCC--cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence                123344444432 1211  13578999999999999999999999999999999754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.4e-33  Score=289.55  Aligned_cols=284  Identities=21%  Similarity=0.269  Sum_probs=179.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+.|.+ .+.||+|+||.||+|.+..+|..||+|++.+..  ......+.+|+.++..+ +||||++++++|....... 
T Consensus         4 ~~~y~~-~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~-   80 (334)
T cd07855           4 GSRYKP-IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADF-   80 (334)
T ss_pred             hhceee-eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCC-
Confidence            355665 468999999999999999999999999986532  12345677899999987 4999999998886533110 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                 .++.+          +.+|- . +              .+...+-.                ....   
T Consensus        81 -----------~~~~l----------v~e~~-~-~--------------~l~~~~~~----------------~~~~---  104 (334)
T cd07855          81 -----------KDVYV----------VMDLM-E-S--------------DLHHIIHS----------------DQPL---  104 (334)
T ss_pred             -----------ceEEE----------EEehh-h-h--------------hHHHHhcc----------------CCCC---
Confidence                       01111          12221 0 0              00000000                0000   


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                          +...+.                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       105 ----~~~~~~------------------~i~~q---i~~aL~~LH--~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~  154 (334)
T cd07855         105 ----TEEHIR------------------YFLYQ---LLRGLKYIH--SANVIHRDLKPSNLLVN---EDCELRIGDFGMA  154 (334)
T ss_pred             ----CHHHHH------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEc---CCCcEEecccccc
Confidence                000000                  02233   667788888  89999999999999995   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ..........    .....+.+||..|+|||++..     ...|+.++|+||+||++|+|++|++||.+.+.........
T Consensus       155 ~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~-----~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~  225 (334)
T cd07855         155 RGLSSSPTEH----KYFMTEYVATRWYRAPELLLS-----LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLIL  225 (334)
T ss_pred             eeecccCcCC----CcccccccccccccChHHhcC-----CcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHH
Confidence            7543222110    112235689999999999853     2358899999999999999999999998754211000000


Q ss_pred             ccchhhHHHHH---------HHHhcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILF---------HSIQQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~---------~~i~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      .....+...++         ..+.. ....+..    .+..+++++++||++||+.||.+||++++++.||||.....
T Consensus       226 ~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         226 SVLGSPSEEVLNRIGSDRVRKYIQN-LPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             HHhCCChhHhhhhhchhhHHHHHhh-cccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence            00000000000         00110 0011111    12457899999999999999999999999999999986544

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=9.4e-34  Score=287.56  Aligned_cols=267  Identities=25%  Similarity=0.390  Sum_probs=174.4

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      |++ .+.||+|+||.||++.+..++..+|+|.+..... ....++.+|++++.++ +||||++++++|.++...+   .+
T Consensus         3 ~~~-~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv   77 (308)
T cd06615           3 FEK-LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEIS---IC   77 (308)
T ss_pred             ceE-EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEE---EE
Confidence            443 4679999999999999999999999999864321 2235678899999997 6999999999987654332   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-                 + +              .+...+...... ||..                  
T Consensus        78 ------~ey~~-----------------~-~--------------~L~~~l~~~~~~-~~~~------------------  100 (308)
T cd06615          78 ------MEHMD-----------------G-G--------------SLDQVLKKAGRI-PENI------------------  100 (308)
T ss_pred             ------eeccC-----------------C-C--------------cHHHHHHhcCCC-CHHH------------------
Confidence                  11110                 0 0              000000000000 0000                  


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       +                     ..+..+   ++.++.|+|  + +||+||||||+|||+.   ..+.+||+|||++...
T Consensus       101 -~---------------------~~~~~~---i~~~l~~lH--~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~  150 (308)
T cd06615         101 -L---------------------GKISIA---VLRGLTYLR--EKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQL  150 (308)
T ss_pred             -H---------------------HHHHHH---HHHHHHHHH--hhCCEEECCCChHHEEEe---cCCcEEEccCCCcccc
Confidence             0                     003334   667888888  6 5899999999999995   3456999999998643


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC--ccc--
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG--WQR--  362 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~--~~~--  362 (539)
                      ...          ...+.+|++.|+|||++.+      ..|+.++|+||+||++|+|++|.+||.+.+.....  +..  
T Consensus       151 ~~~----------~~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  214 (308)
T cd06615         151 IDS----------MANSFVGTRSYMSPERLQG------THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPV  214 (308)
T ss_pred             ccc----------ccccCCCCcCccChhHhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcc
Confidence            211          1235689999999999853      45888999999999999999999999754321100  000  


Q ss_pred             --Cc---------------cchhhHHHHHHHH-hcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        363 --GE---------------TCHACQEILFHSI-QQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       363 --~~---------------~~~~~~~~~~~~i-~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                        ..               ........+...+ ....+..|.   ..++.++++||.+||..||++|||++|+++||||.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         215 SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             ccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence              00               0000000111111 111222222   24788999999999999999999999999999997


Q ss_pred             CC
Q psy16343        425 TA  426 (539)
Q Consensus       425 ~~  426 (539)
                      ..
T Consensus       292 ~~  293 (308)
T cd06615         292 RA  293 (308)
T ss_pred             hc
Confidence            64

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.2e-33  Score=282.84  Aligned_cols=271  Identities=21%  Similarity=0.289  Sum_probs=171.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .|++ .+.||+|+||.||+|.+..++..||||.+....  ......+.+|+++++.+ +||||+++++++........  
T Consensus        13 ~y~~-~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~--   88 (310)
T cd07865          13 KYEK-LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPYN--   88 (310)
T ss_pred             heEE-EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEeccccccc--
Confidence            3554 467999999999999999999999999885432  12234567899999987 59999999998865432210  


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      ..      ..++.          -+.+|. + +              .+......               ...... ...
T Consensus        89 ~~------~~~~~----------lv~e~~-~-~--------------~l~~~l~~---------------~~~~~~-~~~  120 (310)
T cd07865          89 RY------KGSFY----------LVFEFC-E-H--------------DLAGLLSN---------------KNVKFT-LSE  120 (310)
T ss_pred             CC------CceEE----------EEEcCC-C-c--------------CHHHHHHh---------------cccCCC-HHH
Confidence            00      00000          111110 0 0              00000000               000000 000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       121 ~~------------------------~i~~q---i~~al~~lH--~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~  168 (310)
T cd07865         121 IK------------------------KVMKM---LLNGLYYIH--RNKILHRDMKAANILIT---KDGILKLADFGLARA  168 (310)
T ss_pred             HH------------------------HHHHH---HHHHHHHHH--HCCeeccCCCHHHEEEC---CCCcEEECcCCCccc
Confidence            11                        12334   677888888  88999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ........    .......+++..|+|||++.+     ...++.++|+||+||++|+|++|++||.+.+...        
T Consensus       169 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~--------  231 (310)
T cd07865         169 FSLSKNSK----PNRYTNRVVTLWYRPPELLLG-----ERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH--------  231 (310)
T ss_pred             ccCCcccC----CCCccCcccCccccCcHHhcC-----CcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--------
Confidence            43322110    112234578999999998853     2347789999999999999999999998754211        


Q ss_pred             chhhHHHHHHHHhc----------------CCCCCCCC--------CC-CCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQ----------------GHYDFPEG--------EW-STISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~----------------~~~~~p~~--------~~-~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          .......+..                ....+|..        .+ ...+..++|||.+||..||.+|||++|+|+|
T Consensus       232 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         232 ----QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             ----HHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence                0001111100                00111111        01 1236788999999999999999999999999


Q ss_pred             CCc
Q psy16343        421 PWI  423 (539)
Q Consensus       421 pw~  423 (539)
                      |||
T Consensus       308 ~~f  310 (310)
T cd07865         308 DFF  310 (310)
T ss_pred             CCC
Confidence            998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.9e-33  Score=278.96  Aligned_cols=254  Identities=27%  Similarity=0.401  Sum_probs=171.1

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK  133 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK  133 (539)
                      ..||+|+||.||+|.+..++..||+|.+..........+.+|++++..+ +|+||+++++++..+...+   .|      
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv------   83 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFK---IF------   83 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEE---EE------
Confidence            4799999999999999999999999998654433445788999999987 5999999999887654322   11      


Q ss_pred             CCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHH
Q psy16343        134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       134 ~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil  213 (539)
                                       .++--+ +              .+...+... + .+  .          ......        
T Consensus        84 -----------------~e~~~~-~--------------~L~~~l~~~-~-~~--~----------~~~~~~--------  109 (268)
T cd06624          84 -----------------MEQVPG-G--------------SLSALLRSK-W-GP--L----------KDNEQT--------  109 (268)
T ss_pred             -----------------EecCCC-C--------------CHHHHHHHh-c-cc--C----------CCcHHH--------
Confidence                             111000 0              000000000 0 00  0          000000        


Q ss_pred             HHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC
Q psy16343        214 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH  293 (539)
Q Consensus       214 ~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~  293 (539)
                                      ...+.++   ++.++.|+|  ++||+||||||+||++..+  .+.+||+|||++........  
T Consensus       110 ----------------~~~~~~q---i~~al~~lH--~~~i~h~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~~~~--  164 (268)
T cd06624         110 ----------------IIFYTKQ---ILEGLKYLH--DNQIVHRDIKGDNVLVNTY--SGVVKISDFGTSKRLAGINP--  164 (268)
T ss_pred             ----------------HHHHHHH---HHHHHHHHH--HCCEeecCCCHHHEEEcCC--CCeEEEecchhheecccCCC--
Confidence                            0002334   677888888  9999999999999999532  34699999999865422111  


Q ss_pred             CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHH
Q psy16343        294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL  373 (539)
Q Consensus       294 ~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~  373 (539)
                            ......|++.|+|||++..    ....++.++|+||+||++|+|++|.+||......             ....
T Consensus       165 ------~~~~~~~~~~~~aPE~~~~----~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~-------------~~~~  221 (268)
T cd06624         165 ------CTETFTGTLQYMAPEVIDK----GPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP-------------QAAM  221 (268)
T ss_pred             ------ccccCCCCccccChhhhcc----ccccCCchhhhHHHHHHHHHHHhCCCCCccccCh-------------hhhH
Confidence                  1223468999999999853    1235788999999999999999999999753211             1111


Q ss_pred             HHH-HhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        374 FHS-IQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       374 ~~~-i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      +.. .......+|    ..+++++++||++||..||++|||++|++.||||
T Consensus       222 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         222 FKVGMFKIHPEIP----ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             hhhhhhccCCCCC----cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            111 111222233    3578999999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=9.9e-34  Score=281.48  Aligned_cols=242  Identities=24%  Similarity=0.351  Sum_probs=161.9

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCCCC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPE  135 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~e  135 (539)
                      ||+|+||.||+|.++.++..+|+|++.+.....     .|+.....+.+||||++++++|......+   .|        
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~---iv--------   87 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHV---LI--------   87 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeE---EE--------
Confidence            799999999999999999999999986532111     12222222346999999999987765333   11        


Q ss_pred             CeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHH
Q psy16343        136 NILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYI  215 (539)
Q Consensus       136 nill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~  215 (539)
                                     .+|  ..+.             .+...+.....+..                 .++         
T Consensus        88 ---------------~e~--~~~~-------------~L~~~l~~~~~l~~-----------------~~~---------  111 (267)
T PHA03390         88 ---------------MDY--IKDG-------------DLFDLLKKEGKLSE-----------------AEV---------  111 (267)
T ss_pred             ---------------EEc--CCCC-------------cHHHHHHhcCCCCH-----------------HHH---------
Confidence                           111  0000             00000000000000                 000         


Q ss_pred             HHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCC
Q psy16343        216 LLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP  295 (539)
Q Consensus       216 lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~  295 (539)
                                     ..+..|   ++.++.|+|  ++||+||||||+||++...+  +.++|+|||++......      
T Consensus       112 ---------------~~~~~q---i~~~l~~lH--~~~i~H~dl~p~nil~~~~~--~~~~l~dfg~~~~~~~~------  163 (267)
T PHA03390        112 ---------------KKIIRQ---LVEALNDLH--KHNIIHNDIKLENVLYDRAK--DRIYLCDYGLCKIIGTP------  163 (267)
T ss_pred             ---------------HHHHHH---HHHHHHHHH--hCCeeeCCCCHHHEEEeCCC--CeEEEecCccceecCCC------
Confidence                           013334   667788888  99999999999999995433  26999999998754321      


Q ss_pred             CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHH
Q psy16343        296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFH  375 (539)
Q Consensus       296 ~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~  375 (539)
                            ....||+.|+|||++.+      ..|+.++|+||+||++|+|++|..||......+.          ....+..
T Consensus       164 ------~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~----------~~~~~~~  221 (267)
T PHA03390        164 ------SCYDGTLDYFSPEKIKG------HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL----------DLESLLK  221 (267)
T ss_pred             ------ccCCCCCcccChhhhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh----------hHHHHHH
Confidence                  23578999999999863      4688899999999999999999999985432210          0111222


Q ss_pred             HHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-HHHHhcCCCcc
Q psy16343        376 SIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-AASVLKHPWIS  424 (539)
Q Consensus       376 ~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-a~e~l~Hpw~~  424 (539)
                      .. .....+    ++.+++.+++||.+||+.||.+|++ ++|+|+||||.
T Consensus       222 ~~-~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        222 RQ-QKKLPF----IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             hh-cccCCc----ccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            22 222222    3468999999999999999999996 59999999996

>KOG0192|consensus

Probab=100.00  E-value=1.7e-33  Score=287.85  Aligned_cols=247  Identities=25%  Similarity=0.366  Sum_probs=166.1

Q ss_pred             CceeceeCceEEEEEEEccCCcE-EEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELE-YAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~-vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ++.||+|+||+||++..  .|.. ||||++......  ....+.+|+.+|.++ +|||||++++++.+.....   .|  
T Consensus        46 ~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~---~i--  117 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRL-RHPNIVQFYGACTSPPGSL---CI--  117 (362)
T ss_pred             hhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCce---EE--
Confidence            35699999999998865  4555 999999653322  245899999999996 5999999999887653200   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC-CCCCCCcccchhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-EASGYDKRCDLWS  208 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~~Dvws  208 (539)
                                          |.+|--+                      |+        +..+... .....       +
T Consensus       118 --------------------VtEy~~~----------------------Gs--------L~~~l~~~~~~~l-------~  140 (362)
T KOG0192|consen  118 --------------------VTEYMPG----------------------GS--------LSVLLHKKRKRKL-------P  140 (362)
T ss_pred             --------------------EEEeCCC----------------------Cc--------HHHHHhhcccCCC-------C
Confidence                                1222100                      11        0000000 00000       0


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC-CCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g-IvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +..++-                  |.-+   ++.++.|+|  +++ ||||||||+|||+....  .++||||||+++...
T Consensus       141 ~~~~l~------------------~ald---iArGm~YLH--~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~  195 (362)
T KOG0192|consen  141 LKVRLR------------------IALD---IARGMEYLH--SEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKV  195 (362)
T ss_pred             HHHHHH------------------HHHH---HHHHHHHHh--cCCCeeecccChhhEEEcCCC--CEEEECCCccceeec
Confidence            011110                  2223   566778888  888 99999999999995332  379999999998544


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        ......||+.|||||++...    ...|+.++|+||+||+++||++|..||.+...            
T Consensus       196 ~~~~--------~~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------------  251 (362)
T KOG0192|consen  196 ISKT--------SMTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------------  251 (362)
T ss_pred             cccc--------cccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------------
Confidence            3211        12236899999999999731    35799999999999999999999999987642            


Q ss_pred             hhHHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                        .......+.. ..+.+|.    ...+...+|+.+|+..||.+||+..+++.
T Consensus       252 --~~~~~~v~~~~~Rp~~p~----~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  252 --VQVASAVVVGGLRPPIPK----ECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             --HHHHHHHHhcCCCCCCCc----cCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence              1222233322 2344443    37889999999999999999999988763

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-33  Score=277.80  Aligned_cols=269  Identities=24%  Similarity=0.373  Sum_probs=175.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.+|+|++..... ...++.+|+++++++.+||||+++++++.+......   
T Consensus         6 ~~y~~-~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~---   80 (275)
T cd06608           6 GIFEL-VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN---   80 (275)
T ss_pred             hheeh-eeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc---
Confidence            45665 4789999999999999999999999999865332 345788999999998789999999998865432000   


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                             ..++.          -+.+|.-+ +              .+...           +..... .....+. ..+
T Consensus        81 -------~~~~~----------lv~e~~~~-~--------------~L~~~-----------~~~~~~-~~~~~~~-~~~  115 (275)
T cd06608          81 -------DDQLW----------LVMELCGG-G--------------SVTDL-----------VKGLRK-KGKRLKE-EWI  115 (275)
T ss_pred             -------ceEEE----------EEEEcCCC-C--------------cHHHH-----------HHHHhh-cCCCCCH-HHH
Confidence                   00010          01111000 0              00000           000000 0000000 000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                              ..+..|   ++.++.|+|  ++||+||||+|+||++..   .+.+||+|||++...
T Consensus       116 ------------------------~~~~~q---l~~al~~lH--~~~i~H~~l~p~ni~~~~---~~~~~l~d~~~~~~~  163 (275)
T cd06608         116 ------------------------AYILRE---TLRGLAYLH--ENKVIHRDIKGQNILLTK---NAEVKLVDFGVSAQL  163 (275)
T ss_pred             ------------------------HHHHHH---HHHHHHHHh--cCCcccCCCCHHHEEEcc---CCeEEECCCccceec
Confidence                                    002333   666777777  999999999999999953   456999999998654


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ......||+.|+|||++..... ....|+.++|+|||||++|+|++|.+||.....           
T Consensus       164 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------  223 (275)
T cd06608         164 DSTLG--------RRNTFIGTPYWMAPEVIACDEQ-PDASYDARSDVWSLGITAIELADGKPPLCDMHP-----------  223 (275)
T ss_pred             ccchh--------hhcCccccccccCHhHhccccc-ccCCccccccHHHhHHHHHHHHhCCCCccccch-----------
Confidence            32211        1235679999999999853111 124578899999999999999999999975321           


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                         ...+. .+..+. ..+...  ..++.++++||.+||..||++|||++|+++|||+
T Consensus       224 ---~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         224 ---MRALF-KIPRNPPPTLKSP--ENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             ---HHHHH-HhhccCCCCCCch--hhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence               12222 233222 122211  2368899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.4e-33  Score=284.08  Aligned_cols=266  Identities=27%  Similarity=0.452  Sum_probs=180.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||++.+..+++.||+|.+.+...   .....+.+|++++..+ +||||+++++.+..+...+   
T Consensus         3 y~~-~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---   77 (305)
T cd05609           3 FET-IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLC---   77 (305)
T ss_pred             ceE-eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEE---
Confidence            444 3679999999999999999999999999865422   2234677899999886 6999999999887654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      .|.+-                 + +              .+...+.....+ ||..                
T Consensus        78 lv------~e~~~-----------------g-~--------------~L~~~l~~~~~~-~~~~----------------  102 (305)
T cd05609          78 MV------MEYVE-----------------G-G--------------DCATLLKNIGAL-PVDM----------------  102 (305)
T ss_pred             EE------EecCC-----------------C-C--------------cHHHHHHHcCCC-CHHH----------------
Confidence            11      11110                 0 0              000000000000 0000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                         ...                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       103 ---~~~---------------------~~~~---i~~~l~~lH--~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~~  150 (305)
T cd05609         103 ---ARM---------------------YFAE---TVLALEYLH--NYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKI  150 (305)
T ss_pred             ---HHH---------------------HHHH---HHHHHHHHH--HCCccccCCchHHEEEC---CCCCEEEeeCCCccc
Confidence               000                     2233   567788888  99999999999999994   445699999999863


Q ss_pred             cccCCCCC-------CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        286 IKFNTSVH-------SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       286 ~~~~~~~~-------~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      ........       .........+..|++.|+|||.+..      ..++.++|+||+||++|+|++|..||.+.+    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~pf~~~~----  220 (305)
T cd05609         151 GLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDT----  220 (305)
T ss_pred             cCcCccccccccccccchhhccccCCccCccccCchhccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----
Confidence            21110000       0000001123578999999999753      468899999999999999999999998653    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC---HHHHhcCCCccCCCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS---AASVLKHPWISTAGT  428 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t---a~e~l~Hpw~~~~~~  428 (539)
                                 ...++..+..+.+..|...+ .++.++++||++||..||++||+   +.++|+||||....+
T Consensus       221 -----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~  281 (305)
T cd05609         221 -----------PEELFGQVISDDIEWPEGDE-ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDW  281 (305)
T ss_pred             -----------HHHHHHHHHhcccCCCCccc-cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCH
Confidence                       23355666666655555433 67999999999999999999997   799999999976544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0668|consensus

Probab=100.00  E-value=5.7e-35  Score=267.63  Aligned_cols=273  Identities=27%  Similarity=0.444  Sum_probs=186.7

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .-.+.|++. +.+|+|.|+.||.|.+..+.+.+.||+++-.   ..+.+.+|+.+|..+.+|||||+|++...+..... 
T Consensus        35 g~~ddYeiv-rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt-  109 (338)
T KOG0668|consen   35 GNQDDYEIV-RKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT-  109 (338)
T ss_pred             cccchHHHH-HHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC-
Confidence            356778874 5689999999999999999999999998532   24678999999999999999999999887754321 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                |.-|.-       .+.=.||-.                                                
T Consensus       110 ----------paLiFE-------~v~n~Dfk~------------------------------------------------  124 (338)
T KOG0668|consen  110 ----------PSLIFE-------YVNNTDFKQ------------------------------------------------  124 (338)
T ss_pred             ----------chhHhh-------hhccccHHH------------------------------------------------
Confidence                      111110       001112200                                                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                               +|+.|+-.        .-..++.+   ++.|+.|+|  ++||+|||+||.|+++.+..  ..++|+|.|+|
T Consensus       125 ---------ly~tl~d~--------dIryY~~e---lLkALdyCH--S~GImHRDVKPhNvmIdh~~--rkLrlIDWGLA  180 (338)
T KOG0668|consen  125 ---------LYPTLTDY--------DIRYYIYE---LLKALDYCH--SMGIMHRDVKPHNVMIDHEL--RKLRLIDWGLA  180 (338)
T ss_pred             ---------Hhhhhchh--------hHHHHHHH---HHHHHhHHH--hcCcccccCCcceeeechhh--ceeeeeecchH
Confidence                     00000000        00002333   678899999  99999999999999997543  45899999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCC-CCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~-~~~~~~~~~~~  362 (539)
                      .....+..         -.-.+.+.+|--||.+..     .+.||.+.|+||+||+|..|+..+-||. |.+..|++..+
T Consensus       181 EFYHp~~e---------YnVRVASRyfKGPELLVd-----y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkI  246 (338)
T KOG0668|consen  181 EFYHPGKE---------YNVRVASRYFKGPELLVD-----YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKI  246 (338)
T ss_pred             hhcCCCce---------eeeeeehhhcCCchheee-----chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHH
Confidence            75433221         123478899999999974     4679999999999999999999887764 66555544332


Q ss_pred             CccchhhHHHHHHHHhcCCCCC-----------CCCCCC---------CCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDF-----------PEGEWS---------TISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~-----------p~~~~~---------~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                      ....++  ++++.-+..-...+           ....|.         -++++|.|||.++|..|-++|+||.|++.|||
T Consensus       247 akVLGt--~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy  324 (338)
T KOG0668|consen  247 AKVLGT--DELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY  324 (338)
T ss_pred             HHHhCh--HHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence            222111  12222222111111           112232         25799999999999999999999999999999


Q ss_pred             ccCC
Q psy16343        423 ISTA  426 (539)
Q Consensus       423 ~~~~  426 (539)
                      |...
T Consensus       325 F~~~  328 (338)
T KOG0668|consen  325 FAPV  328 (338)
T ss_pred             HHHH
Confidence            9753

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.4e-33  Score=288.31  Aligned_cols=279  Identities=23%  Similarity=0.278  Sum_probs=175.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..|.+ .+.||+|+||.||+|.+..++..||||.+.+..  ......+.+|+.++..+ +||||+++++++.......  
T Consensus         5 ~~y~~-~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~--   80 (337)
T cd07858           5 TKYVP-IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREA--   80 (337)
T ss_pred             cceeE-EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-CCCCccchHHheecccccc--
Confidence            34555 468999999999999999999999999986431  22234677899999987 5999999998876432110  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                               ...+.+          +.++. . +              .+...+...                ...... 
T Consensus        81 ---------~~~~~l----------v~e~~-~-~--------------~L~~~~~~~----------------~~l~~~-  108 (337)
T cd07858          81 ---------FNDVYI----------VYELM-D-T--------------DLHQIIRSS----------------QTLSDD-  108 (337)
T ss_pred             ---------cCcEEE----------EEeCC-C-C--------------CHHHHHhcC----------------CCCCHH-
Confidence                     000000          11110 0 0              000000000                000000 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       109 ~~~------------------------~i~~q---i~~aL~~LH--~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~  156 (337)
T cd07858         109 HCQ------------------------YFLYQ---LLRGLKYIH--SANVLHRDLKPSNLLLN---ANCDLKICDFGLAR  156 (337)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--hCCEecCCCCHHHEEEc---CCCCEEECcCcccc
Confidence            000                        02333   667788888  99999999999999994   34569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC-----
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG-----  359 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~-----  359 (539)
                      ......        ....+.+||..|+|||++..     ...++.++|+||+||++|+|++|++||.+.+.....     
T Consensus       157 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  223 (337)
T cd07858         157 TTSEKG--------DFMTEYVVTRWYRAPELLLN-----CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE  223 (337)
T ss_pred             ccCCCc--------ccccccccccCccChHHHhc-----CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence            543221        11235578999999999853     235788999999999999999999999765321000     


Q ss_pred             ---cccCccch-hhHHHHHHHHhcCCCCCC----CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        360 ---WQRGETCH-ACQEILFHSIQQGHYDFP----EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       360 ---~~~~~~~~-~~~~~~~~~i~~~~~~~p----~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                         ....+... .........+... ...+    ...++.+++++++||++||+.||++|||++|+|+||||....
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         224 LLGSPSEEDLGFIRNEKARRYIRSL-PYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             HhCCCChHHhhhcCchhhhHHHHhc-CcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence               00000000 0000000000000 0000    112346899999999999999999999999999999997643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-33  Score=285.66  Aligned_cols=277  Identities=23%  Similarity=0.291  Sum_probs=172.9

Q ss_pred             CceeceeCceEEEEEEEcc--CCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNIL--TELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~--t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|.+..  ++..||+|++.+..   ......+.+|++++..+ +||||+++++++.+.....   . 
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---~-   79 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKS---V-   79 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCce---E-
Confidence            3569999999999999988  89999999997532   22345678899999987 5999999999987652111   0 


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                               .+           +.++.-. .               +...           +.....  ...     .-+
T Consensus        80 ---------~l-----------v~e~~~~-~---------------l~~~-----------~~~~~~--~~~-----~~~  105 (316)
T cd07842          80 ---------YL-----------LFDYAEH-D---------------LWQI-----------IKFHRQ--AKR-----VSI  105 (316)
T ss_pred             ---------EE-----------EEeCCCc-C---------------HHHH-----------HHhhcc--CCC-----cCc
Confidence                     01           1111000 0               0000           000000  000     000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC-CCCCCceeccCCCcccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP-DQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~-~~~~~ikl~DFGla~~~  286 (539)
                      +...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+..+ +..+.+||+|||++...
T Consensus       106 ~~~~~~------------------~i~~q---i~~~l~~lH--~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~  162 (316)
T cd07842         106 PPSMVK------------------SLLWQ---ILNGVHYLH--SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLF  162 (316)
T ss_pred             CHHHHH------------------HHHHH---HHHHHHHHH--hCCEeeCCCCHHHEEEcCCCCccceEEECCCcccccc
Confidence            000000                  02233   667778888  9999999999999999642 12567999999998755


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......     .......+||+.|+|||++.+     ...|+.++|+|||||++|+|++|++||.+..........  ..
T Consensus       163 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~--~~  230 (316)
T cd07842         163 NAPLKP-----LADLDPVVVTIWYRAPELLLG-----ARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP--FQ  230 (316)
T ss_pred             CCCccc-----ccccCCccccccccCHHHHhC-----CCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccch--hH
Confidence            332210     011234578999999998853     245888999999999999999999999876533200000  00


Q ss_pred             hhhHHHHHHHHh----------------------cCCCCCC-------CCCCCCCCHHHHHHHHHhccccccCCCCHHHH
Q psy16343        367 HACQEILFHSIQ----------------------QGHYDFP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASV  417 (539)
Q Consensus       367 ~~~~~~~~~~i~----------------------~~~~~~p-------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~  417 (539)
                      ......+...+.                      .....++       ...|...+.++.+||.+||..||++|||++|+
T Consensus       231 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ei  310 (316)
T cd07842         231 RDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEA  310 (316)
T ss_pred             HHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence            000000000000                      0000111       00122568899999999999999999999999


Q ss_pred             hcCCCc
Q psy16343        418 LKHPWI  423 (539)
Q Consensus       418 l~Hpw~  423 (539)
                      +.||||
T Consensus       311 l~~~~f  316 (316)
T cd07842         311 LEHPYF  316 (316)
T ss_pred             hcCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-33  Score=289.75  Aligned_cols=279  Identities=24%  Similarity=0.307  Sum_probs=175.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|.+ .+.||+|+||.||+|.+..+++.||||++.+..  ......+.+|++++.++ +||||+++++++.......
T Consensus        15 ~~~~y~~-~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~   92 (345)
T cd07877          15 VPERYQN-LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE   92 (345)
T ss_pred             ccCceEE-EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeeccccc
Confidence            4455665 468999999999999999999999999986532  12235677899999987 5999999999886543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ..          .++.+          +.++ .+ +              .+...           +.      ....+.
T Consensus        93 ~~----------~~~~l----------v~~~-~~-~--------------~L~~~-----------~~------~~~l~~  119 (345)
T cd07877          93 EF----------NDVYL----------VTHL-MG-A--------------DLNNI-----------VK------CQKLTD  119 (345)
T ss_pred             cc----------ccEEE----------Eehh-cc-c--------------CHHHH-----------Hh------cCCCCH
Confidence            00          00110          0010 00 0              00000           00      000000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       ..++                        .+..|   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||+
T Consensus       120 -~~~~------------------------~i~~q---i~~aL~~LH--~~~ivH~dlkp~NIll~---~~~~~kl~dfg~  166 (345)
T cd07877         120 -DHVQ------------------------FLIYQ---ILRGLKYIH--SADIIHRDLKPSNLAVN---EDCELKILDFGL  166 (345)
T ss_pred             -HHHH------------------------HHHHH---HHHHHHHHH--HCCeeecCCChHHEEEc---CCCCEEEecccc
Confidence             0000                        02233   667788888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......           .....||+.|+|||++.+     ...++.++|+||+||++|+|++|++||.+.+........
T Consensus       167 ~~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~  230 (345)
T cd07877         167 ARHTDDE-----------MTGYVATRWYRAPEIMLN-----WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI  230 (345)
T ss_pred             ccccccc-----------ccccccCCCccCHHHHhC-----ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            8743211           224578999999999853     245788999999999999999999999765321100000


Q ss_pred             CccchhhHHHHHH--------HHhcCCCCCCC----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILFH--------SIQQGHYDFPE----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~~--------~i~~~~~~~p~----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..........+..        .........|.    ..+...+++++|||.+||+.||.+|+++.+++.||||....
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~  307 (345)
T cd07877         231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  307 (345)
T ss_pred             HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence            0000000000000        00000001111    11234688999999999999999999999999999998644

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.3e-33  Score=288.05  Aligned_cols=280  Identities=24%  Similarity=0.322  Sum_probs=177.8

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|.+ .+.||+|+||.||+|.+..++..||||++.+...  .....+.+|++++..+ +||||+++++++.......
T Consensus        13 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          13 VPDRYRD-LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             cccceEE-EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcccc
Confidence            5566765 4679999999999999999999999999864321  1234677899999987 5999999999887553221


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .   .      .+.+++           .+|. +..               +...           ...      .... 
T Consensus        91 ~---~------~~~~lv-----------~e~~-~~~---------------l~~~-----------~~~------~~l~-  116 (343)
T cd07880          91 R---F------HDFYLV-----------MPFM-GTD---------------LGKL-----------MKH------EKLS-  116 (343)
T ss_pred             c---c------ceEEEE-----------EecC-CCC---------------HHHH-----------Hhc------CCCC-
Confidence            0   0      001111           1110 000               0000           000      0000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       117 ~~~~~------------------------~i~~q---i~~al~~LH--~~gi~H~dlkp~Nill~---~~~~~kl~dfg~  164 (343)
T cd07880         117 EDRIQ------------------------FLVYQ---MLKGLKYIH--AAGIIHRDLKPGNLAVN---EDCELKILDFGL  164 (343)
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEc---CCCCEEEeeccc
Confidence            00000                        02333   667778888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......           .....||+.|+|||++..     ...++.++|+|||||++|+|++|.+||.+.+........
T Consensus       165 ~~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~  228 (343)
T cd07880         165 ARQTDSE-----------MTGYVVTRWYRAPEVILN-----WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEI  228 (343)
T ss_pred             ccccccC-----------ccccccCCcccCHHHHhC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            8754221           124578999999999863     234788999999999999999999999865321100000


Q ss_pred             CccchhhHHHHHHHHhcC--------CCCCC----CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQG--------HYDFP----EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~--------~~~~p----~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ..........+...+...        ...+.    ...+..+++++.+||.+||..||++|||+.+++.||||.....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         229 MKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             HHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence            000000000001111000        00010    1123468899999999999999999999999999999986543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.7e-33  Score=288.19  Aligned_cols=279  Identities=18%  Similarity=0.204  Sum_probs=167.0

Q ss_pred             ceecee--CceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         54 EILGKG--AYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        54 ~~LG~G--~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ++||+|  +||+||++.+..+|+.||||+++....  .....+.+|+++++.+ +|||||+++++|..+...+   .|  
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~---lv--   77 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELW---VV--   77 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEE---EE--
Confidence            579999  789999999999999999999964321  1223466788888876 6999999999987664432   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          .|.+              ..|                  .+...+..          ..    ....+ ...++  
T Consensus        78 ----~e~~--------------~~~------------------~l~~~~~~----------~~----~~~l~-~~~~~--  104 (327)
T cd08227          78 ----TSFM--------------AYG------------------SAKDLICT----------HF----MDGMS-ELAIA--  104 (327)
T ss_pred             ----Eecc--------------CCC------------------cHHHHHHh----------hc----cCCCC-HHHHH--
Confidence                1110              000                  00000000          00    00000 00000  


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                            .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.++++|||.+......
T Consensus       105 ----------------------~i~~q---i~~~L~~LH--~~~iiH~dlkp~Nil~~~---~~~~~l~~~~~~~~~~~~  154 (327)
T cd08227         105 ----------------------YILQG---VLKALDYIH--HMGYVHRSVKASHILISV---DGKVYLSGLRSNLSMINH  154 (327)
T ss_pred             ----------------------HHHHH---HHHHHHHHH--HCCEecCCCChhhEEEec---CCcEEEcccchhhccccc
Confidence                                  02333   667888888  999999999999999954   356899999865432111


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc-----
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE-----  364 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~-----  364 (539)
                      .. ............+++..|+|||++.+    ....|+.++||||+||++|+|++|.+||..............     
T Consensus       155 ~~-~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  229 (327)
T cd08227         155 GQ-RLRVVHDFPKYSVKVLPWLSPEVLQQ----NLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC  229 (327)
T ss_pred             cc-cccccccccccccceecccChHHhhc----ccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccc
Confidence            10 00000001123467889999999863    124689999999999999999999999975321110000000     


Q ss_pred             ---cchhhHHHHHHHH---------hcCCC---CCC-------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        365 ---TCHACQEILFHSI---------QQGHY---DFP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       365 ---~~~~~~~~~~~~i---------~~~~~---~~p-------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                         ......+.+....         ..+..   ..+       ......+++++++||.+||+.||++|||++|+++|||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~  309 (327)
T cd08227         230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF  309 (327)
T ss_pred             cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence               0000000000000         00000   000       0011246789999999999999999999999999999


Q ss_pred             ccCC
Q psy16343        423 ISTA  426 (539)
Q Consensus       423 ~~~~  426 (539)
                      |...
T Consensus       310 f~~~  313 (327)
T cd08227         310 FKQI  313 (327)
T ss_pred             hhhc
Confidence            9753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2e-33  Score=289.49  Aligned_cols=278  Identities=24%  Similarity=0.342  Sum_probs=176.0

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+.|.+ .+.||+|+||.||+|++..+|+.||||++.+..  ......+.+|++++..+ +||||+++++++........
T Consensus        14 ~~~y~~-~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          14 PERYTS-LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             ccceEE-EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCC
Confidence            345554 468999999999999999999999999986532  12234578899999987 69999999998865432110


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                ..+..+          +.++  ...              .+....+.                  ..   
T Consensus        92 ----------~~~~~l----------v~e~--~~~--------------~l~~~~~~------------------~~---  114 (342)
T cd07879          92 ----------FQDFYL----------VMPY--MQT--------------DLQKIMGH------------------PL---  114 (342)
T ss_pred             ----------CceEEE----------Eecc--ccc--------------CHHHHHcC------------------CC---
Confidence                      001110          0110  000              00000000                  00   


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                          +...+..                  +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       115 ----~~~~~~~------------------~~~q---i~~aL~~LH--~~~i~H~dlkp~NIll~---~~~~~kL~dfg~~  164 (342)
T cd07879         115 ----SEDKVQY------------------LVYQ---MLCGLKYIH--SAGIIHRDLKPGNLAVN---EDCELKILDFGLA  164 (342)
T ss_pred             ----CHHHHHH------------------HHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEEeeCCCC
Confidence                0000000                  2223   567778888  89999999999999995   3456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.....           ....+||+.|+|||++..     ...|+.++|+||+||++|+|++|+.||.+.+..+......
T Consensus       165 ~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~  228 (342)
T cd07879         165 RHADAE-----------MTGYVVTRWYRAPEVILN-----WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL  228 (342)
T ss_pred             cCCCCC-----------CCCceeeecccChhhhcC-----ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            643211           124578999999999853     2357889999999999999999999998754211000000


Q ss_pred             ccchhhHHHHHHHH--------hcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSI--------QQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i--------~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      .............+        ......++..    .++..+.++++||.+||+.||.+||++++++.||||.....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            00000000000000        0001111111    12457889999999999999999999999999999987654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=8.1e-33  Score=277.43  Aligned_cols=246  Identities=14%  Similarity=0.166  Sum_probs=165.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---HHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ...||+|++|.||+|..  +|+.||||.+.+.....   ...+.+|+.+|.++ +|||||++++++.+....        
T Consensus        25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~--------   93 (283)
T PHA02988         25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDD--------   93 (283)
T ss_pred             CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccC--------
Confidence            35799999999999976  78999999997543322   35567999999997 599999999988651110        


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          ..++.          -+.+|.-+ +              .+...+-.               . ...+     |..
T Consensus        94 ----~~~~~----------lv~Ey~~~-g--------------~L~~~l~~---------------~-~~~~-----~~~  123 (283)
T PHA02988         94 ----LPRLS----------LILEYCTR-G--------------YLREVLDK---------------E-KDLS-----FKT  123 (283)
T ss_pred             ----CCceE----------EEEEeCCC-C--------------cHHHHHhh---------------C-CCCC-----hhH
Confidence                00110          11222100 0              00000000               0 0000     000


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      .                    ..+..+   ++.++.|+|  + .+++||||||+|||+.   ..+.+||+|||+++....
T Consensus       124 ~--------------------~~i~~~---i~~~l~~lH--~~~~~~Hrdlkp~nill~---~~~~~kl~dfg~~~~~~~  175 (283)
T PHA02988        124 K--------------------LDMAID---CCKGLYNLY--KYTNKPYKNLTSVSFLVT---ENYKLKIICHGLEKILSS  175 (283)
T ss_pred             H--------------------HHHHHH---HHHHHHHHH--hcCCCCCCcCChhhEEEC---CCCcEEEcccchHhhhcc
Confidence            0                    002223   566777787  6 4899999999999995   446799999999875422


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      .           ....+||+.|+|||++...    ...|+.++||||+||++|+|++|..||.+.+              
T Consensus       176 ~-----------~~~~~~~~~y~aPE~~~~~----~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~--------------  226 (283)
T PHA02988        176 P-----------PFKNVNFMVYFSYKMLNDI----FSEYTIKDDIYSLGVVLWEIFTGKIPFENLT--------------  226 (283)
T ss_pred             c-----------cccccCcccccCHHHhhhc----cccccchhhhhHHHHHHHHHHHCCCCCCCCC--------------
Confidence            1           1245789999999998631    2468999999999999999999999997653              


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                       ...++..+..+...++.+  ...++++++||.+||+.||++|||++|+++
T Consensus       227 -~~~~~~~i~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        227 -TKEIYDLIINKNNSLKLP--LDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             -HHHHHHHHHhcCCCCCCC--CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence             223455554443333221  257899999999999999999999999985

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.5e-33  Score=280.34  Aligned_cols=271  Identities=23%  Similarity=0.330  Sum_probs=172.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .|++ .+.||+|+||.||+|.+..+++.||+|++.+..  ......+.+|++++..+ +||||++++++++.....+   
T Consensus         2 ~y~~-~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~---   76 (286)
T cd07847           2 KYEK-LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLH---   76 (286)
T ss_pred             ceee-eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEE---
Confidence            3554 467999999999999999999999999885432  12234577899999987 5999999999987654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      .|.+-                 + .              .+......                ....+. ..
T Consensus        77 ~v------~e~~~-----------------~-~--------------~l~~~~~~----------------~~~~~~-~~  101 (286)
T cd07847          77 LV------FEYCD-----------------H-T--------------VLNELEKN----------------PRGVPE-HL  101 (286)
T ss_pred             EE------EeccC-----------------c-c--------------HHHHHHhC----------------CCCCCH-HH
Confidence            11      11100                 0 0              00000000                000000 00


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++                        .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++..
T Consensus       102 ~~------------------------~~~~q---l~~~l~~LH--~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~  149 (286)
T cd07847         102 IK------------------------KIIWQ---TLQAVNFCH--KHNCIHRDVKPENILIT---KQGQIKLCDFGFARI  149 (286)
T ss_pred             HH------------------------HHHHH---HHHHHHHHH--HCCceecCCChhhEEEc---CCCcEEECcccccee
Confidence            00                        02333   667778888  89999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        ......|+..|+|||++.+     ...|+.++|+||+||++|+|++|.+||.+.+..+..+.....
T Consensus       150 ~~~~~~--------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~  216 (286)
T cd07847         150 LTGPGD--------DYTDYVATRWYRAPELLVG-----DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT  216 (286)
T ss_pred             cCCCcc--------cccCcccccccCCHHHHhC-----CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            432211        1124568899999999853     235788999999999999999999999875432110000000


Q ss_pred             chhhHHHHHHHHhcCC----CCCCC--------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        366 CHACQEILFHSIQQGH----YDFPE--------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~----~~~p~--------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ................    ...|.        ..+..++..+.+||.+||..||++||++.|++.||||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            0000000000000000    01111        1134678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-33  Score=278.29  Aligned_cols=253  Identities=27%  Similarity=0.393  Sum_probs=175.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      |++ .+.||.|+||.||+|.+..+++.||+|++.... ......+.+|+++++.+. ||||+++++++.++...+   .|
T Consensus         3 y~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~---~v   77 (274)
T cd06609           3 FTL-LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLW---II   77 (274)
T ss_pred             hhh-hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEE---EE
Confidence            444 357999999999999999999999999986532 222346778999999875 999999999887653322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                             .+|  ..+.             .+...+... ....+.                 ++
T Consensus        78 -----------------------~e~--~~~~-------------~L~~~~~~~-~~~~~~-----------------~~  101 (274)
T cd06609          78 -----------------------MEY--CGGG-------------SCLDLLKPG-KLDETY-----------------IA  101 (274)
T ss_pred             -----------------------EEe--eCCC-------------cHHHHHhhc-CCCHHH-----------------HH
Confidence                                   111  0000             000000000 000000                 00


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+||++..   .+.++|+|||+++...
T Consensus       102 ------------------------~~~~q---l~~~l~~lh--~~~i~h~dl~p~ni~i~~---~~~~~l~d~g~~~~~~  149 (274)
T cd06609         102 ------------------------FILRE---VLLGLEYLH--EEGKIHRDIKAANILLSE---EGDVKLADFGVSGQLT  149 (274)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--hCCcccCCCCHHHEEECC---CCCEEEcccccceeec
Confidence                                    02333   667777777  999999999999999954   4569999999987654


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        ......||+.|+|||++..      ..++.++|+||+||++|+|++|.+||.+.+.            
T Consensus       150 ~~~~--------~~~~~~~~~~y~~PE~~~~------~~~~~~sDv~slG~il~~l~tg~~p~~~~~~------------  203 (274)
T cd06609         150 STMS--------KRNTFVGTPFWMAPEVIKQ------SGYDEKADIWSLGITAIELAKGEPPLSDLHP------------  203 (274)
T ss_pred             cccc--------ccccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCcccCch------------
Confidence            3211        1235679999999999863      3488999999999999999999999975431            


Q ss_pred             hhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        368 ACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       368 ~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                         ......+..+. ..++.   ..++.++.++|.+||..||++|||++++++||||...
T Consensus       204 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         204 ---MRVLFLIPKNNPPSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             ---HHHHHHhhhcCCCCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence               11223333332 22222   2378999999999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=4.4e-33  Score=275.34  Aligned_cols=264  Identities=27%  Similarity=0.404  Sum_probs=177.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|++ .+.||.|+||.||+|....++..+|+|++.+.. ......+.+|+++++.+ +|+||+++++.+..+...+   .
T Consensus         2 ~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---i   76 (267)
T cd06610           2 DYEL-IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELW---L   76 (267)
T ss_pred             ccee-eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEE---E
Confidence            3554 578999999999999998899999999986432 22346788999999886 6999999998886654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +      .|.+-                 + +              .+...+..          ...   ....+ ...+
T Consensus        77 v------~e~~~-----------------~-~--------------~l~~~~~~----------~~~---~~~~~-~~~~  104 (267)
T cd06610          77 V------MPYLS-----------------G-G--------------SLLDIMKS----------SYP---RGGLD-EAII  104 (267)
T ss_pred             E------EeccC-----------------C-C--------------cHHHHHHH----------hcc---cCCCC-HHHH
Confidence            1      11110                 0 0              00000000          000   00000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +                        .+..+   ++.++.|+|  ++||+||||||+||++.+   .+.+||+|||++...
T Consensus       105 ~------------------------~~~~q---l~~al~~lh--~~~i~h~~l~p~ni~~~~---~~~~~l~df~~~~~~  152 (267)
T cd06610         105 A------------------------TVLKE---VLKGLEYLH--SNGQIHRDIKAGNILLGE---DGSVKIADFGVSASL  152 (267)
T ss_pred             H------------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHhEEEcC---CCCEEEcccchHHHh
Confidence            0                        13334   667788888  999999999999999953   456999999998755


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .......    .......+|++.|+|||++..     ...++.++|+||+||++|+|++|+.||...+..          
T Consensus       153 ~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~-----~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~----------  213 (267)
T cd06610         153 ADGGDRT----RKVRKTFVGTPCWMAPEVMEQ-----VHGYDFKADIWSFGITAIELATGAAPYSKYPPM----------  213 (267)
T ss_pred             ccCcccc----ccccccccCChhhcChHHHcc-----ccCcCcccchHhHhHHHHHHHhCCCCccccChh----------
Confidence            4322110    011235679999999999863     235788999999999999999999999764321          


Q ss_pred             hhhHHHHHHHHhcCCCCCCCC-CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQGHYDFPEG-EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~-~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                          +.....+......++.. .+..+++++++||.+||.+||++||+++++++||||
T Consensus       214 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         214 ----KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ----hhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence                11222222222223222 235789999999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.8e-33  Score=279.82  Aligned_cols=269  Identities=26%  Similarity=0.345  Sum_probs=171.7

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||.||+|.+..+|..||||++..... .....+.+|++++..+ +||||+++++++.+....+   .|    
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv----   76 (284)
T cd07836           5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLM---LV----   76 (284)
T ss_pred             eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEE---EE----
Confidence            4679999999999999999999999999865422 2345677899999987 5999999999987754332   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                        .|.+-              -++...                ....+....+..+..                      
T Consensus        77 --~e~~~--------------~~l~~~----------------~~~~~~~~~~~~~~~----------------------  102 (284)
T cd07836          77 --FEYMD--------------KDLKKY----------------MDTHGVRGALDPNTV----------------------  102 (284)
T ss_pred             --EecCC--------------ccHHHH----------------HHhcCCCCCcCHHHH----------------------
Confidence              11100              000000                000000000000000                      


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                         ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++........
T Consensus       103 -------------------~~~~~q---i~~~l~~lH--~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836         103 -------------------KSFTYQ---LLKGIAFCH--ENRVLHRDLKPQNLLIN---KRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             -------------------HHHHHH---HHHHHHHHH--HCCeeeCCCCHHHEEEC---CCCcEEEeecchhhhhcCCcc
Confidence                               003334   667788887  99999999999999994   345699999999875432211


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              .....++|+.|++||++..     ...|+.++|+||+||++|+|++|.+||.+.+..+......+.......
T Consensus       156 --------~~~~~~~~~~y~~PE~~~~-----~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  222 (284)
T cd07836         156 --------TFSNEVVTLWYRAPDVLLG-----SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTE  222 (284)
T ss_pred             --------ccccccccccccChHHhcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCh
Confidence                    1124468999999999853     235788999999999999999999999876432100000000000000


Q ss_pred             HHHHHHhcCC---CCCCCC-------CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        372 ILFHSIQQGH---YDFPEG-------EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       372 ~~~~~i~~~~---~~~p~~-------~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..+..+....   ..+|..       ..+.++.+++++|.+||+.||.+||+++|+++||||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         223 STWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             hhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            0111111000   011100       012468899999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=8.8e-33  Score=277.24  Aligned_cols=253  Identities=26%  Similarity=0.399  Sum_probs=176.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||++.+..++..+|+|.++.........+.+|+.++..+ +||||+++++++..+...+          
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~----------   92 (285)
T cd06648          24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELW----------   92 (285)
T ss_pred             ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEE----------
Confidence            45899999999999999999999999998644333445678899998886 6999999999886543322          


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                           +           +.+|  ..+.             .+...+.. .-+..+                         
T Consensus        93 -----~-----------v~e~--~~~~-------------~L~~~~~~-~~~~~~-------------------------  115 (285)
T cd06648          93 -----V-----------VMEF--LEGG-------------ALTDIVTH-TRMNEE-------------------------  115 (285)
T ss_pred             -----E-----------EEec--cCCC-------------CHHHHHHh-CCCCHH-------------------------
Confidence                 1           1111  0000             00000000 000000                         


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                      ....+..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++........ 
T Consensus       116 ----------------~~~~~~~q---l~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~~~~~~~~~-  170 (285)
T cd06648         116 ----------------QIATVCLA---VLKALSFLH--AQGVIHRDIKSDSILLT---SDGRVKLSDFGFCAQVSKEVP-  170 (285)
T ss_pred             ----------------HHHHHHHH---HHHHHHHHH--hCCeecCCCChhhEEEc---CCCcEEEcccccchhhccCCc-
Confidence                            00013344   667788888  99999999999999994   345699999998765432111 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             ......|++.|+|||++.+      ..|+.++|+||+||++|+|++|..||.+.+.               ..
T Consensus       171 -------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~---------------~~  222 (285)
T cd06648         171 -------RRKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP---------------LQ  222 (285)
T ss_pred             -------ccccccCCccccCHHHhcC------CCCCCcccHHHHHHHHHHHHhCCCCCcCCCH---------------HH
Confidence                   1234579999999999853      3588899999999999999999999976431               22


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ....+..+....... ...++.++.+||.+||..||++||++.++++||||....
T Consensus       223 ~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         223 AMKRIRDNLPPKLKN-LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             HHHHHHhcCCCCCcc-cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence            334444443222211 124789999999999999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.3e-33  Score=276.76  Aligned_cols=256  Identities=25%  Similarity=0.400  Sum_probs=173.3

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC------CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH------SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~------~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      ++.||+|+||.||++.+..+++.||+|++......      ....+.+|++++.++ +||||+++++++.+....+   .
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~---~   80 (268)
T cd06630           5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFN---L   80 (268)
T ss_pred             cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEE---E
Confidence            57899999999999999999999999999643211      234678899999987 5999999999987654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      .|.+.                   +                    ++        +.                
T Consensus        81 v------~e~~~-------------------~--------------------~~--------L~----------------   91 (268)
T cd06630          81 F------VEWMA-------------------G--------------------GS--------VS----------------   91 (268)
T ss_pred             E------EeccC-------------------C--------------------Cc--------HH----------------
Confidence            1      11000                   0                    00        00                


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                              .++....|+..  .....|.+|   ++.++.|+|  ++||+||||||+||++...+  ..+||+|||++...
T Consensus        92 --------~~l~~~~~~~~--~~~~~~~~q---l~~al~~LH--~~~i~H~~i~~~nil~~~~~--~~~~l~dfg~~~~~  154 (268)
T cd06630          92 --------HLLSKYGAFKE--AVIINYTEQ---LLRGLSYLH--ENQIIHRDVKGANLLIDSTG--QRLRIADFGAAARL  154 (268)
T ss_pred             --------HHHHHhCCCCH--HHHHHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEcCCC--CEEEEccccccccc
Confidence                    00000000000  000113445   777888888  99999999999999995322  35899999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ...... .   .......+||..|+|||++.+      ..++.++|+||+||++|+|++|.+||.......         
T Consensus       155 ~~~~~~-~---~~~~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---------  215 (268)
T cd06630         155 AAKGTG-A---GEFQGQLLGTIAFMAPEVLRG------EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN---------  215 (268)
T ss_pred             cccccc-C---CccccccccccceeCHhHhcc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc---------
Confidence            322110 0   001124578999999999853      467889999999999999999999996543211         


Q ss_pred             hhhHHHHHHHHh--cCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        367 HACQEILFHSIQ--QGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       367 ~~~~~~~~~~i~--~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                         .......+.  .....+|    ..++++++++|.+||..||++||++.++++||||.
T Consensus       216 ---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         216 ---HLALIFKIASATTAPSIP----EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             ---hHHHHHHHhccCCCCCCc----hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence               111122221  1222333    35789999999999999999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=4.9e-33  Score=285.32  Aligned_cols=277  Identities=26%  Similarity=0.318  Sum_probs=173.2

Q ss_pred             CceeceeCceEEEEEEEccC--CcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILT--ELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t--~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|.+..+  +..||||.+.....  .....+.+|+++++++.+||||++++++.......       
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~-------   77 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN-------   77 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc-------
Confidence            46799999999999999888  88999999864221  12456788999999887899999998864321100       


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           ...+.+          +.++- . .              .+...+..                ...    .+...
T Consensus        78 -----~~~~~~----------~~e~~-~-~--------------~L~~~l~~----------------~~~----~~~~~  106 (332)
T cd07857          78 -----FNELYL----------YEELM-E-A--------------DLHQIIRS----------------GQP----LTDAH  106 (332)
T ss_pred             -----CCcEEE----------EEecc-c-C--------------CHHHHHhc----------------CCC----CCHHH
Confidence                 001110          11110 0 0              00000000                000    00000


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      +-.                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.....
T Consensus       107 ~~~---------------------~~~q---i~~aL~~LH--~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857         107 FQS---------------------FIYQ---ILCGLKYIH--SANVLHRDLKPGNLLVN---ADCELKICDFGLARGFSE  157 (332)
T ss_pred             HHH---------------------HHHH---HHHHHHHHH--hCCcccCCCCHHHeEEc---CCCCEEeCcCCCceeccc
Confidence            001                     2333   667788888  99999999999999994   345699999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ....    ........+||+.|+|||++.+     ...++.++|+||+||++|+|++|.+||.+.+..............
T Consensus       158 ~~~~----~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  228 (332)
T cd07857         158 NPGE----NAGFMTEYVATRWYRAPEIMLS-----FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGT  228 (332)
T ss_pred             cccc----ccccccCcccCccccCcHHHhC-----CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCC
Confidence            2111    0112335689999999998753     246889999999999999999999999865421100000000000


Q ss_pred             hHHHHHHHHh------------c-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        369 CQEILFHSIQ------------Q-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       369 ~~~~~~~~i~------------~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ........+.            . ....++ ..+..++.++++||.+||+.||.+|||++|++.|||++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         229 PDEETLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             CCHHHHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            0000000000            0 011111 1234578999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=5.5e-33  Score=273.08  Aligned_cols=250  Identities=25%  Similarity=0.370  Sum_probs=173.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|....++..||+|.+...  .......+.+|+++++.+ +||||+++++++.+....+   .    
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---l----   76 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLN---I----   76 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEE---E----
Confidence            35799999999999999999999999998643  223355678899999987 5999999999887654322   1    


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         +.+|--+ +              .+...           +...   ...... ...+|.  
T Consensus        77 -------------------v~e~~~~-~--------------~L~~~-----------l~~~---~~~~~~-~~~~~~--  105 (256)
T cd08529          77 -------------------VMEYAEN-G--------------DLHKL-----------LKMQ---RGRPLP-EDQVWR--  105 (256)
T ss_pred             -------------------EEEeCCC-C--------------cHHHH-----------HHHh---cCCCCC-HHHHHH--
Confidence                               1111000 0              00000           0000   000000 000110  


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                            +..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||+++......
T Consensus       106 ----------------------i~~~---l~~al~~lH--~~~i~h~dl~~~nili~~---~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529         106 ----------------------FFIQ---ILLGLAHLH--SKKILHRDIKSLNLFLDA---YDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             ----------------------HHHH---HHHHHHHHH--HCCcccCCCCcceEEEeC---CCCEEEcccccceeccCcc
Confidence                                  2223   566777888  999999999999999954   4569999999987553321


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ...+.+|++.|+|||++..      ..++.++|+|||||++|+|++|..||...+               .
T Consensus       156 ~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------------~  206 (256)
T cd08529         156 N--------FANTIVGTPYYLSPELCED------KPYNEKSDVWALGVVLYECCTGKHPFDANN---------------Q  206 (256)
T ss_pred             c--------hhhccccCccccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCC---------------H
Confidence            1        1234579999999999863      457889999999999999999999997643               2


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ......+..+.+....   ..++.+++++|.+||+.||++||++.++++|||+
T Consensus       207 ~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         207 GALILKIIRGVFPPVS---QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHHHcCCCCCCc---cccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            2344455554432221   2578999999999999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=3.6e-33  Score=280.89  Aligned_cols=262  Identities=23%  Similarity=0.347  Sum_probs=174.2

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|.+..+++.||||.+.....  .....+.+|+++++.+ +||||+++++++.+....+   .
T Consensus         4 y~~-~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   78 (294)
T PLN00009          4 YEK-VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLY---L   78 (294)
T ss_pred             eEE-EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEE---E
Confidence            444 4679999999999999999999999999864322  2234677899999997 6999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .+|- . +              .+...+..                ....  .-+.
T Consensus        79 v-----------------------~e~~-~-~--------------~l~~~~~~----------------~~~~--~~~~  101 (294)
T PLN00009         79 V-----------------------FEYL-D-L--------------DLKKHMDS----------------SPDF--AKNP  101 (294)
T ss_pred             E-----------------------Eecc-c-c--------------cHHHHHHh----------------CCCC--CcCH
Confidence            1                       1110 0 0              00000000                0000  0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      -.+..                     +..+   ++.++.|+|  ++||+||||||+||++...+  ..+||+|||++...
T Consensus       102 ~~~~~---------------------~~~q---i~~aL~~LH--~~~i~H~dl~p~nill~~~~--~~~kl~dfg~~~~~  153 (294)
T PLN00009        102 RLIKT---------------------YLYQ---ILRGIAYCH--SHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAF  153 (294)
T ss_pred             HHHHH---------------------HHHH---HHHHHHHHH--hCCeeCCCCCcceEEEECCC--CEEEEccccccccc
Confidence            00011                     2233   667788888  89999999999999996432  45899999998654


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ......|++.|+|||++.+     ...++.++|+||+||++|+|++|.+||.+.+..+         
T Consensus       154 ~~~~~--------~~~~~~~~~~y~~PE~~~~-----~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~---------  211 (294)
T PLN00009        154 GIPVR--------TFTHEVVTLWYRAPEILLG-----SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID---------  211 (294)
T ss_pred             CCCcc--------ccccCceeecccCHHHHhC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---------
Confidence            32211        1224578999999999853     2357889999999999999999999998653211         


Q ss_pred             hhhHHHHHHHHh---cC-----------------CCCCCC----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        367 HACQEILFHSIQ---QG-----------------HYDFPE----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       367 ~~~~~~~~~~i~---~~-----------------~~~~p~----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                           .+...+.   ..                 ...++.    .....+++++++||.+||..||++||+++++++|||
T Consensus       212 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~  286 (294)
T PLN00009        212 -----ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEY  286 (294)
T ss_pred             -----HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence                 1111110   00                 000000    012357899999999999999999999999999999


Q ss_pred             ccCCC
Q psy16343        423 ISTAG  427 (539)
Q Consensus       423 ~~~~~  427 (539)
                      |...+
T Consensus       287 ~~~~~  291 (294)
T PLN00009        287 FKDLG  291 (294)
T ss_pred             HhHHh
Confidence            98654

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=5.9e-33  Score=289.44  Aligned_cols=146  Identities=19%  Similarity=0.361  Sum_probs=107.3

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++........      ....+..+++.|||||++.. 
T Consensus       221 i~~aL~yLH--~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~-  288 (374)
T cd05106         221 VAQGMDFLA--SKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNY------VVKGNARLPVKWMAPESIFD-  288 (374)
T ss_pred             HHHHHHHHH--HCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcce------eeccCCCCccceeCHHHhcC-
Confidence            677888888  99999999999999995   3456999999998754322110      00112345678999999853 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                           ..|+.++||||+||++|+|++ |.+||......              ......+..+ +..+..  ..+++++++
T Consensus       289 -----~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--------------~~~~~~~~~~-~~~~~~--~~~~~~l~~  346 (374)
T cd05106         289 -----CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--------------SKFYKMVKRG-YQMSRP--DFAPPEIYS  346 (374)
T ss_pred             -----CCCCccccHHHHHHHHHHHHhCCCCCCcccccc--------------HHHHHHHHcc-cCccCC--CCCCHHHHH
Confidence                 468999999999999999997 99999764321              1223333322 222211  246899999


Q ss_pred             HHHHhccccccCCCCHHHHhc
Q psy16343        399 LIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l~  419 (539)
                      ||.+||..||++|||++++++
T Consensus       347 li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         347 IMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=6e-33  Score=277.00  Aligned_cols=254  Identities=28%  Similarity=0.374  Sum_probs=172.8

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||.||+|.+..+|+.||+|++.+...   .....+..|+++++.+ +||||++++++++.....+   .|     
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---lv-----   71 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLC---LV-----   71 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEE---EE-----
Confidence            6999999999999999999999999864321   1234567899999987 5999999999887654333   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       .|.+-                   +.             .+...+..          .    ...... ..+++     
T Consensus        72 -~e~~~-------------------~~-------------~L~~~l~~----------~----~~~~~~-~~~~~-----   98 (277)
T cd05577          72 -MTLMN-------------------GG-------------DLKYHIYN----------V----GEPGFP-EARAI-----   98 (277)
T ss_pred             -EecCC-------------------CC-------------cHHHHHHH----------c----CcCCCC-HHHHH-----
Confidence             11100                   00             00000000          0    000000 00000     


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                         .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......  
T Consensus        99 -------------------~~~~q---l~~~l~~lH--~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~~~~~~~~--  149 (277)
T cd05577          99 -------------------FYAAQ---IICGLEHLH--QRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGK--  149 (277)
T ss_pred             -------------------HHHHH---HHHHHHHHH--hCCcccCCCCHHHEEEC---CCCCEEEccCcchhhhccCC--
Confidence                               02233   566777777  99999999999999994   44569999999986543211  


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             ......|+..|+|||++.+      ..++.++|+||+||++|+|++|+.||.+.....           ....
T Consensus       150 -------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------~~~~  205 (277)
T cd05577         150 -------KIKGRAGTPGYMAPEVLQG------EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-----------EKEE  205 (277)
T ss_pred             -------ccccccCCCCcCCHHHhcC------CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-----------cHHH
Confidence                   1124568899999999863      348889999999999999999999997653211           1122


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                      +...+......++    ..+++++++||.+||..||.+||     ++.+++.||||...++
T Consensus       206 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         206 LKRRTLEMAVEYP----DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             HHhccccccccCC----ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence            3333333333333    35799999999999999999999     8999999999986554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=9.9e-33  Score=279.41  Aligned_cols=278  Identities=21%  Similarity=0.303  Sum_probs=173.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+.|.+ .+.||+|+||.||+|.+..+++.||||++.....  .....+.+|++++..+ +||||+++++++.+......
T Consensus         7 ~~~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEI-LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEE-EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheeccccccc
Confidence            355665 4679999999999999999999999999854322  1224567899999987 69999999988755432110


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..        ...+.          -+.+|- . .              .+........               .    .
T Consensus        85 ~~--------~~~~~----------lv~~~~-~-~--------------~l~~~~~~~~---------------~----~  111 (311)
T cd07866          85 RK--------RGSVY----------MVTPYM-D-H--------------DLSGLLENPS---------------V----K  111 (311)
T ss_pred             cc--------CceEE----------EEEecC-C-c--------------CHHHHHhccc---------------c----C
Confidence            00        00000          111110 0 0              0000000000               0    0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .+.-....                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       112 ~~~~~~~~---------------------i~~~---l~~al~~lH--~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~  162 (311)
T cd07866         112 LTESQIKC---------------------YMLQ---LLEGINYLH--ENHILHRDIKAANILID---NQGILKIADFGLA  162 (311)
T ss_pred             CCHHHHHH---------------------HHHH---HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCCEEECcCccc
Confidence            00000000                     2333   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCC---CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        284 SGIKFNTSVHSP---LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       284 ~~~~~~~~~~~~---~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      ............   ..........||+.|+|||++.+     ...|+.++|+||+||++|+|++|++||.+.+..+   
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~---  234 (311)
T cd07866         163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG-----ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID---  234 (311)
T ss_pred             hhccCCCcccccCCcccccccccceeccCcCChHHhhC-----CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH---
Confidence            754322111000   01112234578999999999853     2457889999999999999999999998754321   


Q ss_pred             ccCccchhhHHHHHHHHhc--------------C-----CCCCC---CCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        361 QRGETCHACQEILFHSIQQ--------------G-----HYDFP---EGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~--------------~-----~~~~p---~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                              ..+.++.....              .     ....+   ...+..+++++.+||.+||..||.+|||+.|++
T Consensus       235 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell  306 (311)
T cd07866         235 --------QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL  306 (311)
T ss_pred             --------HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence                    00111110000              0     00000   011345668899999999999999999999999


Q ss_pred             cCCCc
Q psy16343        419 KHPWI  423 (539)
Q Consensus       419 ~Hpw~  423 (539)
                      .||||
T Consensus       307 ~~~~f  311 (311)
T cd07866         307 EHPYF  311 (311)
T ss_pred             cCCCC
Confidence            99997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5.5e-33  Score=276.09  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=172.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---C-------CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---H-------SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~-------~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.||+|+||.||+|.+..+++.||+|.++....   .       ..+.+.+|++++..+ +||||+++++++......+
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   84 (272)
T cd06629           6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTEEYLS   84 (272)
T ss_pred             cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccCCceE
Confidence            5789999999999999999999999998853211   0       113466799989886 6999999999886653322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++--+ +              .+...+........+.+             
T Consensus        85 ---lv-----------------------~e~~~~-~--------------~L~~~l~~~~~l~~~~~-------------  110 (272)
T cd06629          85 ---IF-----------------------LEYVPG-G--------------SIGSCLRTYGRFEEQLV-------------  110 (272)
T ss_pred             ---EE-----------------------EecCCC-C--------------cHHHHHhhccCCCHHHH-------------
Confidence               11                       111000 0              00000000000000000             


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                  ..+..+   ++.++.|+|  ++|++||||||+||++.   ..+.+||+|||+
T Consensus       111 ----------------------------~~~~~q---i~~~l~~lH--~~~i~H~dl~~~nil~~---~~~~~~l~d~~~  154 (272)
T cd06629         111 ----------------------------RFFTEQ---VLEGLAYLH--SKGILHRDLKADNLLVD---ADGICKISDFGI  154 (272)
T ss_pred             ----------------------------HHHHHH---HHHHHHHHh--hCCeeecCCChhhEEEc---CCCeEEEeeccc
Confidence                                        002233   667778888  89999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +........      ........|+..|+|||++...    ...++.++|+|||||++|+|++|..||.....       
T Consensus       155 ~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~----~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------  217 (272)
T cd06629         155 SKKSDDIYD------NDQNMSMQGSVFWMAPEVIHSY----SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-------  217 (272)
T ss_pred             ccccccccc------ccccccccCCccccCHHHhccc----cCCCCccchhHHHHHHHHHHHhCCCCCcCcch-------
Confidence            864321110      0112356789999999998631    13478899999999999999999999964321       


Q ss_pred             CccchhhHHHHHHHH-hcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        363 GETCHACQEILFHSI-QQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i-~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                             .+...... ......++...+..++.++++||.+||.+||++||+++++|+||||
T Consensus       218 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         218 -------IAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             -------HHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence                   11122211 1223445555556789999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=8.3e-33  Score=273.29  Aligned_cols=250  Identities=30%  Similarity=0.497  Sum_probs=176.0

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||.|+||.||+|.+..+++.||+|++.+...   .....+.+|++++..+ +||||+++++++.++...+    +     
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~----l-----   70 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIY----M-----   70 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccE----E-----
Confidence            6999999999999999999999999965332   2345688899999887 6999999999887654332    1     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                                       +.+|  ..+.             .+...+....-+..+                       .+
T Consensus        71 -----------------v~e~--~~~~-------------~L~~~l~~~~~l~~~-----------------------~~   95 (262)
T cd05572          71 -----------------LMEY--CLGG-------------ELWTILRDRGLFDEY-----------------------TA   95 (262)
T ss_pred             -----------------EEec--CCCC-------------cHHHHHhhcCCCCHH-----------------------HH
Confidence                             1111  0000             000000000000000                       00


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                        ..+..+   ++.++.|+|  ++|++|+||||+||++.   ..+.+||+|||++.......  
T Consensus        96 ------------------~~~~~~---i~~~l~~lH--~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~~~~~~--  147 (262)
T cd05572          96 ------------------RFYIAC---VVLAFEYLH--NRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKKLKSGQ--  147 (262)
T ss_pred             ------------------HHHHHH---HHHHHHHHh--hCCcccCCCCHHHEEEc---CCCCEEEeeCCcccccCccc--
Confidence                              002233   667778888  99999999999999994   34569999999987553221  


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             .....+|++.|+|||++..      ..++.++|+||+||++|+|++|.+||.+....             ...
T Consensus       148 -------~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------------~~~  201 (262)
T cd05572         148 -------KTWTFCGTPEYVAPEIILN------KGYDFSVDYWSLGILLYELLTGRPPFGEDDED-------------PME  201 (262)
T ss_pred             -------ccccccCCcCccChhHhcC------CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-------------HHH
Confidence                   1224578999999999853      45788999999999999999999999865421             223


Q ss_pred             HHHHHh--cCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        373 LFHSIQ--QGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       373 ~~~~i~--~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                      ....+.  ...+.+|.    ..++++++||.+||..||++|++     ++|+++||||....+
T Consensus       202 ~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         202 IYNDILKGNGKLEFPN----YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             HHHHHhccCCCCCCCc----ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence            444555  33444443    35899999999999999999999     999999999986544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=2.9e-33  Score=281.50  Aligned_cols=272  Identities=24%  Similarity=0.286  Sum_probs=169.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .|++ .+.||+|+||.||+|.+..++..+|+|.++....  .....+.+|++++..+. ||||+++++++.+.....   
T Consensus         6 ~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~---   80 (293)
T cd07843           6 EYEK-LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDK---   80 (293)
T ss_pred             hhhh-hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCc---
Confidence            3554 3679999999999999999999999999964322  12235678999999875 999999999876542100   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                 +.+          +.+|  ..+              .+...+.. ...+..+                 
T Consensus        81 -----------~~l----------v~e~--~~~--------------~L~~~~~~~~~~l~~~-----------------  106 (293)
T cd07843          81 -----------IYM----------VMEY--VEH--------------DLKSLMETMKQPFLQS-----------------  106 (293)
T ss_pred             -----------EEE----------Eehh--cCc--------------CHHHHHHhccCCCCHH-----------------
Confidence                       000          0111  000              00000000 0000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                            .+                  ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       107 ------~~------------------~~i~~q---i~~aL~~LH--~~~i~H~dl~p~nili~---~~~~~~l~d~g~~~  154 (293)
T cd07843         107 ------EV------------------KCLMLQ---LLSGVAHLH--DNWILHRDLKTSNLLLN---NRGILKICDFGLAR  154 (293)
T ss_pred             ------HH------------------HHHHHH---HHHHHHHHH--HCCeeeccCCHHHEEEC---CCCcEEEeecCcee
Confidence                  00                  002333   677888888  89999999999999995   44669999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ......+++.|+|||++.+     ...++.++|+||+||++|+|++|.+||.+.+..+.......
T Consensus       155 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~  221 (293)
T cd07843         155 EYGSPLK--------PYTQLVVTLWYRAPELLLG-----AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFK  221 (293)
T ss_pred             eccCCcc--------ccccccccccccCchhhcC-----CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            5543211        1224568899999999863     23467899999999999999999999986542210000000


Q ss_pred             cchhhHHHHHHHH------h-----cCCCCCCCCCCCC--CCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        365 TCHACQEILFHSI------Q-----QGHYDFPEGEWST--ISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       365 ~~~~~~~~~~~~i------~-----~~~~~~p~~~~~~--~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      .+.......+..+      .     ...+......+..  +++.+++||++||+.||++|||++|+|.||||
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         222 LLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            0000000000000      0     0000000111122  58899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=8.5e-33  Score=276.81  Aligned_cols=270  Identities=26%  Similarity=0.370  Sum_probs=172.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|++ .+.||+|+||.||+|.+..+++.+|+|+++... .....+.+|+.++..+.+||||+++++++.......  
T Consensus        16 ~~~~~~~-~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~--   91 (286)
T cd06638          16 PSDTWEI-IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN--   91 (286)
T ss_pred             cccceee-eeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC--
Confidence            3445665 467999999999999999999999999986432 223567789999998867999999999874321100  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                               -++..          -+.+|--+ +              .+...           +...... ..... ..
T Consensus        92 ---------~~~~~----------lv~e~~~~-~--------------~L~~~-----------l~~~~~~-~~~~~-~~  124 (286)
T cd06638          92 ---------GDQLW----------LVLELCNG-G--------------SVTDL-----------VKGFLKR-GERME-EP  124 (286)
T ss_pred             ---------CCeEE----------EEEeecCC-C--------------CHHHH-----------HHHhhcc-Ccccc-HH
Confidence                     00000          01111000 0              00000           0000000 00000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .+|.                        +..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++.
T Consensus       125 ~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dlkp~nili~~---~~~~kl~dfg~~~  172 (286)
T cd06638         125 IIAY------------------------ILHE---ALMGLQHLH--VNKTIHRDVKGNNILLTT---EGGVKLVDFGVSA  172 (286)
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--hCCccccCCCHHhEEECC---CCCEEEccCCcee
Confidence            0000                        2223   566777888  899999999999999954   4559999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ...+..||+.|+|||++.... .....|+.++|+||+||++|+|++|.+||.+....        
T Consensus       173 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--------  235 (286)
T cd06638         173 QLTSTRL--------RRNTSVGTPFWMAPEVIACEQ-QLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--------  235 (286)
T ss_pred             ecccCCC--------ccccccCCCcccChhhhchhh-hccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--------
Confidence            5432211        122457999999999985210 01245888999999999999999999999764321        


Q ss_pred             cchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        365 TCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                            ..+ ..+.... .....  -...+.++++||.+||..||++|||+.|+++||||
T Consensus       236 ------~~~-~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         236 ------RAL-FKIPRNPPPTLHQ--PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             ------HHH-hhccccCCCcccC--CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence                  111 1121111 11111  12357899999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1e-32  Score=273.48  Aligned_cols=253  Identities=26%  Similarity=0.423  Sum_probs=167.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-----CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-----HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-----~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|.+..++..||+|++.....     .....+.+|++++..+ +||||+++++++.+......  -+
T Consensus         7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~--~l   83 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL--TI   83 (266)
T ss_pred             cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE--EE
Confidence            5789999999999999999999999999864321     1224577899999987 59999999988765321110  00


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            +.++--+ +              .+...+..                ....+ ...++
T Consensus        84 ----------------------~~e~~~~-~--------------~L~~~l~~----------------~~~l~-~~~~~  109 (266)
T cd06651          84 ----------------------FMEYMPG-G--------------SVKDQLKA----------------YGALT-ESVTR  109 (266)
T ss_pred             ----------------------EEeCCCC-C--------------cHHHHHHH----------------cCCCC-HHHHH
Confidence                                  0111000 0              00000000                00000 00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||+++...
T Consensus       110 ------------------------~~~~q---i~~~l~~LH--~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~~~  157 (266)
T cd06651         110 ------------------------KYTRQ---ILEGMSYLH--SNMIVHRDIKGANILRD---SAGNVKLGDFGASKRLQ  157 (266)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--hCCeeeCCCCHHHEEEC---CCCCEEEccCCCccccc
Confidence                                    02333   677788888  99999999999999994   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .....     ........|+..|+|||++..      ..++.++|+||+||++|+|++|++||.....            
T Consensus       158 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------------  214 (266)
T cd06651         158 TICMS-----GTGIRSVTGTPYWMSPEVISG------EGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------------  214 (266)
T ss_pred             ccccc-----CCccccCCccccccCHHHhCC------CCCCchhhhHHHHHHHHHHHHCCCCccccch------------
Confidence            21110     011234568999999999863      4578899999999999999999999975421            


Q ss_pred             hhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        368 ACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       368 ~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                        .+......... .+.+|    ..+++.+++||+ ||..||++||+++|+++||||.
T Consensus       215 --~~~~~~~~~~~~~~~~~----~~~~~~~~~li~-~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         215 --MAAIFKIATQPTNPQLP----SHISEHARDFLG-CIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             --HHHHHHHhcCCCCCCCc----hhcCHHHHHHHH-HhcCChhhCcCHHHHhcCcccc
Confidence              11222222111 22333    357899999994 6668999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-33  Score=277.80  Aligned_cols=268  Identities=24%  Similarity=0.336  Sum_probs=170.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||.|++|.||+|.+..+|..||+|++....  ......+.+|++++..+ +||||+++++++.++...+    ++  
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~----iv--   76 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLY----LV--   76 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEE----EE--
Confidence            467999999999999999999999999986432  12234677899999987 5999999999887653322    11  


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                          .++  ..+              .+...+....              ....    +   ..
T Consensus        77 --------------------~e~--~~~--------------~l~~~~~~~~--------------~~~~----~---~~   99 (283)
T cd07835          77 --------------------FEF--LDL--------------DLKKYMDSSP--------------LTGL----D---PP   99 (283)
T ss_pred             --------------------Eec--cCc--------------CHHHHHhhCC--------------CCCC----C---HH
Confidence                                111  000              0000000000              0000    0   00


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .++                  .+..+   ++.++.|+|  ++||+||||+|+||++..   .+.++|+|||++.......
T Consensus       100 ~~~------------------~~~~~---i~~~L~~lH--~~~~~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835         100 LIK------------------SYLYQ---LLQGIAYCH--SHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPV  153 (283)
T ss_pred             HHH------------------HHHHH---HHHHHHHHH--HCCeeCCCCCHHHEEEcC---CCcEEEeecccccccCCCc
Confidence            000                  02333   667788888  899999999999999954   4569999999987543221


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......+++.|+|||++.+     ...++.++|+||+||++|+|++|.+||.+.+..+..+........+.
T Consensus       154 ~--------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  220 (283)
T cd07835         154 R--------TYTHEVVTLWYRAPEILLG-----SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPD  220 (283)
T ss_pred             c--------ccCccccccCCCCCceeec-----CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            1        1123467899999998753     23578899999999999999999999976542110000000000000


Q ss_pred             HHHHHH----------HhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHS----------IQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~----------i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ...+..          ........+......++.++.+||.+||+.||.+|||++|++.||||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         221 EDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            000000          00011111111234678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=3.2e-33  Score=279.68  Aligned_cols=269  Identities=23%  Similarity=0.373  Sum_probs=171.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|.+..+++.||+|++.+....  ....+.+|++++..+ +||||+++++++.++...+   .
T Consensus         3 y~~-~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   77 (286)
T cd07846           3 YEN-LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLY---L   77 (286)
T ss_pred             eeE-eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEE---E
Confidence            443 46799999999999999999999999998653222  234677899999986 6999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .+|  ..+                    +.        +..+.. .....    +.
T Consensus        78 v-----------------------~e~--~~~--------------------~~--------l~~~~~-~~~~~----~~   99 (286)
T cd07846          78 V-----------------------FEF--VDH--------------------TV--------LDDLEK-YPNGL----DE   99 (286)
T ss_pred             E-----------------------Eec--CCc--------------------cH--------HHHHHh-ccCCC----CH
Confidence            1                       111  000                    00        000000 00000    00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                         ..+                  ..+..+   ++.++.|+|  ++||+||||||+||++.+   .+.+||+|||++...
T Consensus       100 ---~~~------------------~~~~~~---i~~~l~~LH--~~~i~h~~l~p~ni~~~~---~~~~~l~dfg~~~~~  150 (286)
T cd07846         100 ---SRV------------------RKYLFQ---ILRGIEFCH--SHNIIHRDIKPENILVSQ---SGVVKLCDFGFARTL  150 (286)
T ss_pred             ---HHH------------------HHHHHH---HHHHHHHHH--HCCccccCCCHHHEEECC---CCcEEEEeeeeeeec
Confidence               000                  002223   667778888  999999999999999943   456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC---
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG---  363 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~---  363 (539)
                      .....        ......|+..|+|||++.+     ...++.++|+||+||++|+|++|.+||.+....+......   
T Consensus       151 ~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~  217 (286)
T cd07846         151 AAPGE--------VYTDYVATRWYRAPELLVG-----DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCL  217 (286)
T ss_pred             cCCcc--------ccCcccceeeccCcHHhcc-----ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHh
Confidence            32221        1234578999999999863     2347788999999999999999999997653211000000   


Q ss_pred             ccchhhHHHHHH--HHhcCCCCCCC--------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        364 ETCHACQEILFH--SIQQGHYDFPE--------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       364 ~~~~~~~~~~~~--~i~~~~~~~p~--------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..........+.  .+.. ...++.        ..++.++..+++||.+||..||++||+++++++||||
T Consensus       218 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         218 GNLIPRHQEIFQKNPLFA-GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CCCchhhHHHhccchHhh-ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            000000000000  0000 011111        1134678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-33  Score=275.43  Aligned_cols=257  Identities=29%  Similarity=0.413  Sum_probs=175.2

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhc--CCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |+. .+.||+|+||.||+|.+..++..||+|.++... .....++.+|+++++.+.  .||||+++++++.++...+   
T Consensus         3 y~~-~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~---   78 (277)
T cd06917           3 YQR-LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW---   78 (277)
T ss_pred             hhh-hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE---
Confidence            444 467999999999999999999999999986432 233456788999988875  5999999999887654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .+      .|.+-                 + +              .+...+.. ..+..+                 .
T Consensus        79 lv------~e~~~-----------------~-~--------------~L~~~~~~-~~l~~~-----------------~  102 (277)
T cd06917          79 II------MEYAE-----------------G-G--------------SVRTLMKA-GPIAEK-----------------Y  102 (277)
T ss_pred             EE------EecCC-----------------C-C--------------cHHHHHHc-cCCCHH-----------------H
Confidence            11      11110                 0 0              00000000 000000                 0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++                        .+..+   ++.++.|+|  ++||+||||||+||++..   .+.++|+|||++..
T Consensus       103 ~~------------------------~i~~~---i~~~l~~lh--~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~  150 (277)
T cd06917         103 IS------------------------VIIRE---VLVALKYIH--KVGVIHRDIKAANILVTN---TGNVKLCDFGVAAL  150 (277)
T ss_pred             HH------------------------HHHHH---HHHHHHHHH--hCCcccCCcCHHHEEEcC---CCCEEEccCCceee
Confidence            00                        02233   666777777  999999999999999954   45699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        ......|++.|+|||.+..     ...++.++|+||+||++|+|++|.+||.+.....        
T Consensus       151 ~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--------  209 (277)
T cd06917         151 LNQNSS--------KRSTFVGTPYWMAPEVITE-----GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR--------  209 (277)
T ss_pred             cCCCcc--------ccccccCCcceeCHHHhcc-----CCccccchhHHHHHHHHHHHHhCCCCCCCCChhh--------
Confidence            433221        1234579999999999853     2457889999999999999999999997643211        


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                             ....+...  ..+.-.+..++.++.+||.+||..||++||++.++++||||....
T Consensus       210 -------~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         210 -------AMMLIPKS--KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             -------hhhccccC--CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence                   11112111  111111234788999999999999999999999999999997643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.3e-32  Score=272.25  Aligned_cols=255  Identities=26%  Similarity=0.397  Sum_probs=169.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC------CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH------SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~------~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      ++.||+|+||.||+|.. .+++.+|||++......      ...++.+|++++.++ +|+||+++++++.+....+   .
T Consensus         5 ~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---l   79 (265)
T cd06631           5 GEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS---I   79 (265)
T ss_pred             cceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE---E
Confidence            57899999999999975 57889999998643211      124577899999987 5999999999987653322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                       .+|--+ +              .+...+....-+ ||                ..+
T Consensus        80 v-----------------------~e~~~~-~--------------~L~~~l~~~~~~-~~----------------~~~  104 (265)
T cd06631          80 F-----------------------MEFVPG-G--------------SISSILNRFGPL-PE----------------PVF  104 (265)
T ss_pred             E-----------------------EecCCC-C--------------cHHHHHHhcCCC-CH----------------HHH
Confidence            1                       111000 0              000000000000 00                001


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |                        .+..+   ++.++.|+|  ++||+|+||||+||++.   ..+.+||+|||++...
T Consensus       105 ~------------------------~~~~q---i~~~l~~lH--~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~  152 (265)
T cd06631         105 C------------------------KYTKQ---ILDGVAYLH--NNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRL  152 (265)
T ss_pred             H------------------------HHHHH---HHHHHHHHH--hCCcccCCcCHHhEEEC---CCCeEEeccchhhHhh
Confidence            1                        02333   667788888  99999999999999995   3456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .......  ..........||+.|+|||++.+      ..|+.++|+|||||++|+|++|.+||...+.           
T Consensus       153 ~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----------  213 (265)
T cd06631         153 AWVGLHG--THSNMLKSMHGTPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPLASMDR-----------  213 (265)
T ss_pred             hhccccc--cccccccccCCCccccChhhhcC------CCCcchhhHHHHHHHHHHHHhCCCccccCCh-----------
Confidence            2211100  00112234679999999999863      4688899999999999999999999975421           


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                         .. ....+.......|. ....++.++++||++||..||++||++.|+++||||
T Consensus       214 ---~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         214 ---LA-AMFYIGAHRGLMPR-LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             ---HH-HHHHhhhccCCCCC-CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence               11 11222222111121 123579999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=5.5e-33  Score=273.88  Aligned_cols=258  Identities=31%  Similarity=0.474  Sum_probs=177.7

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||.||+|.+..+|+.||+|++.+...   .....+.+|++++.++ +||||+++++.+..+...+   .+     
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~---lv-----   71 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLY---LV-----   71 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEE---EE-----
Confidence            6899999999999999999999999965332   2345678899999987 4999999998876554322   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       .|.+-                 + +              .+...+.....+..+                 .+      
T Consensus        72 -~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~-----------------~~------   95 (265)
T cd05579          72 -MEYLP-----------------G-G--------------DLASLLENVGSLDED-----------------VA------   95 (265)
T ss_pred             -EecCC-----------------C-C--------------cHHHHHHHcCCCCHH-----------------HH------
Confidence             11000                 0 0              000000000000000                 00      


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                        ..+.+|   ++.++.|+|  ++||+||||+|+||++.   ..+.+||+|||++.........
T Consensus        96 ------------------~~i~~q---i~~~L~~lH--~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          96 ------------------RIYIAE---IVLALEYLH--SNGIIHRDLKPDNILID---SNGHLKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             ------------------HHHHHH---HHHHHHHHH--HcCeecCCCCHHHeEEc---CCCCEEEEecccchhcccCccc
Confidence                              013344   677788888  99999999999999995   4456999999998743322110


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                      ............++++.|+|||++..      ..++.++|+|||||++|+|++|..||....               ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---------------~~~  208 (265)
T cd05579         150 NLNDDEKEDKRIVGTPDYIAPEVILG------QGHSKTVDWWSLGCILYEFLVGIPPFHGET---------------PEE  208 (265)
T ss_pred             ccccccccccCcccCccccCHHHhcC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCC---------------HHH
Confidence            00000111234578999999999863      347789999999999999999999997543               234


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH---HHHhcCCCccCCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA---ASVLKHPWISTAG  427 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta---~e~l~Hpw~~~~~  427 (539)
                      .+..+..+.+.+|..  ..++.++.+||.+||+.||++|||+   .++|+||||....
T Consensus       209 ~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         209 IFQNILNGKIEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             HHHHHhcCCcCCCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence            566666666666643  2358999999999999999999999   9999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.5e-33  Score=285.34  Aligned_cols=280  Identities=26%  Similarity=0.334  Sum_probs=176.7

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|.+ .+.||+|+||.||+|++..++..||||++....  ......+.+|+.+++.+ +||||+++++++.......
T Consensus        13 ~~~~y~~-~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07851          13 VPDRYQN-LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLE   90 (343)
T ss_pred             ccCceEE-EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhcccccc
Confidence            5566765 468999999999999999999999999986432  12234577899999987 6999999998776543210


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .       ...+          .-+.++- + .              .+...+..                 ...+ 
T Consensus        91 ---~-------~~~~----------~lv~e~~-~-~--------------~L~~~~~~-----------------~~l~-  116 (343)
T cd07851          91 ---D-------FQDV----------YLVTHLM-G-A--------------DLNNIVKC-----------------QKLS-  116 (343)
T ss_pred             ---c-------cccE----------EEEEecC-C-C--------------CHHHHHhc-----------------CCCC-
Confidence               0       0000          0111110 0 0              00000000                 0000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ..++|.                        +..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||+
T Consensus       117 ~~~~~~------------------------~~~q---l~~aL~~LH--~~gi~H~dlkp~Nill~~---~~~~kL~dfg~  164 (343)
T cd07851         117 DDHIQF------------------------LVYQ---ILRGLKYIH--SAGIIHRDLKPSNIAVNE---DCELKILDFGL  164 (343)
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHeEECC---CCCEEEccccc
Confidence            001111                        2223   567778888  999999999999999953   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......           ....++|+.|+|||++..     ...++.++|+|||||++|+|++|++||.+....+.....
T Consensus       165 ~~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i  228 (343)
T cd07851         165 ARHTDDE-----------MTGYVATRWYRAPEIMLN-----WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRI  228 (343)
T ss_pred             ccccccc-----------ccCCcccccccCHHHHhC-----CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            8754321           234578999999999853     235788999999999999999999999765321100000


Q ss_pred             CccchhhHHHHHHHHh--------cCCCCCCC----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQ--------QGHYDFPE----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~--------~~~~~~p~----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ...+....+.+...+.        ......+.    ..+..+++++.|||.+||..||++|||+.++++||||.....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         229 MNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             HHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence            0000000000000000        00000000    012346899999999999999999999999999999986544

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1006|consensus

Probab=100.00  E-value=6e-34  Score=266.24  Aligned_cols=261  Identities=25%  Similarity=0.321  Sum_probs=174.6

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeee-cccccccccCCeeeec
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYY-EDDENHERHKRIAHRD  131 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~-~~~~~~~~~~~IiHrD  131 (539)
                      +.||.|+||+|+|-.++.+|+..|||.|..... .++.+++.|.+...+..+.||||++++.. .+++-+.         
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi---------  140 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI---------  140 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee---------
Confidence            468999999999999999999999999964333 45678899999888878899999999653 3333211         


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                       .+|-+-              ..+-.                ++.++-. ..-.-||.+.+                   
T Consensus       141 -CMELMd--------------~SlDk----------------lYk~vy~vq~~~ipE~Ilg-------------------  170 (361)
T KOG1006|consen  141 -CMELMD--------------ISLDK----------------LYKRVYSVQKSRIPENILG-------------------  170 (361)
T ss_pred             -eHHHHh--------------hhHHH----------------HHHHHHHHHhccCcHhhhh-------------------
Confidence             011110              00000                0000000 00001221110                   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                               .            +.   -|.+.|+.|+-- ...|||||+||+|||+   +..|.|||||||++..+....
T Consensus       171 ---------~------------It---vatV~AL~yLK~-~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~Si  222 (361)
T KOG1006|consen  171 ---------H------------IT---VATVDALDYLKE-ELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVDSI  222 (361)
T ss_pred             ---------h------------ee---eeehhHHHHHHH-HhhhhhccCChhheEE---ecCCCEeeecccchHhHHHHH
Confidence                     0            00   013445566542 4579999999999999   667789999999976543221


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .         .+--+|...|||||-+..    ...+||-++|+||||++|||+.+|..|+.+=+              ..
T Consensus       223 A---------kT~daGCrpYmAPERi~p----~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--------------sv  275 (361)
T KOG1006|consen  223 A---------KTVDAGCRPYMAPERIDP----SDKGYDIRSDVWSLGITLYEVATGNFPYRKWD--------------SV  275 (361)
T ss_pred             H---------hhhccCCccccChhccCC----ccCCcchhhhhhhhcceEeeeecCCCCcchHH--------------HH
Confidence            1         112378899999999863    34589999999999999999999999997621              11


Q ss_pred             HHHHHHHhcCCCCCC--CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        371 EILFHSIQQGHYDFP--EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p--~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      -+....+..|.+..-  ..+--+.|...+.||.-||.+|-+.||.-.+++++||++....
T Consensus       276 feql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~  335 (361)
T KOG1006|consen  276 FEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAV  335 (361)
T ss_pred             HHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhh
Confidence            112334445544321  1122357999999999999999999999999999999986543

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=8.2e-33  Score=288.52  Aligned_cols=147  Identities=23%  Similarity=0.373  Sum_probs=108.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++.........      ...+..++..|+|||++.. 
T Consensus       223 i~~~l~~lH--~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-  290 (375)
T cd05104         223 VAKGMSFLA--SKNCIHRDLAARNILLTH---GRITKICDFGLARDIRNDSNYV------VKGNARLPVKWMAPESIFN-  290 (375)
T ss_pred             HHHHHHHHH--HCCeeccCCchhhEEEEC---CCcEEEecCccceeccCccccc------ccCCCCCCcceeChhHhcC-
Confidence            667788888  899999999999999953   4568999999987543221100      0112345678999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                           ..|+.++||||+||++|+|++ |.+||.+....              ..+...+..+. ..+.  +...+.++++
T Consensus       291 -----~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--------------~~~~~~~~~~~-~~~~--~~~~~~~l~~  348 (375)
T cd05104         291 -----CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--------------SKFYKMIKEGY-RMLS--PECAPSEMYD  348 (375)
T ss_pred             -----CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--------------HHHHHHHHhCc-cCCC--CCCCCHHHHH
Confidence                 468899999999999999998 89999764321              22334444432 2111  1346889999


Q ss_pred             HHHHhccccccCCCCHHHHhcC
Q psy16343        399 LIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ||.+||..||++||++.|+++.
T Consensus       349 li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         349 IMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHHHccCChhHCcCHHHHHHH
Confidence            9999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1e-32  Score=283.50  Aligned_cols=285  Identities=26%  Similarity=0.350  Sum_probs=180.4

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.|.+ .+.||+|+||.||+|.+..++..+|||.+.+.  .......+.+|+.++.++.+||||+++++++......
T Consensus         4 ~~~~~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~   82 (337)
T cd07852           4 HILRKYEI-LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK   82 (337)
T ss_pred             hhhhHHHH-hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence            45667776 47899999999999999999999999988542  1223345778999999985799999999987543211


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .             .++           +.+|.-+                .+...           +..      ....
T Consensus        83 ~-------------~~l-----------v~e~~~~----------------~L~~~-----------~~~------~~~~  105 (337)
T cd07852          83 D-------------IYL-----------VFEYMET----------------DLHAV-----------IRA------NILE  105 (337)
T ss_pred             e-------------EEE-----------Eeccccc----------------CHHHH-----------Hhc------CCCC
Confidence            1             001           1111000                00000           000      0000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                       ..+++   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       106 -~~~~~---~---------------------i~~q---i~~~L~~LH--~~~i~H~dl~p~nill~---~~~~~kl~d~g  152 (337)
T cd07852         106 -DVHKR---Y---------------------IMYQ---LLKALKYIH--SGNVIHRDLKPSNILLN---SDCRVKLADFG  152 (337)
T ss_pred             -HHHHH---H---------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHEEEc---CCCcEEEeecc
Confidence             00000   0                     1223   566777777  99999999999999994   45679999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ++..........   .........||+.|+|||++.+     ...++.++|+||+||++|+|++|++||.+....+....
T Consensus       153 ~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~  224 (337)
T cd07852         153 LARSLSELEENP---ENPVLTDYVATRWYRAPEILLG-----STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK  224 (337)
T ss_pred             chhccccccccc---cCcchhcccccccccCceeeec-----cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            987543322110   1123345689999999998753     24578899999999999999999999976542210000


Q ss_pred             cCccch------------hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        362 RGETCH------------ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       362 ~~~~~~------------~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ......            .....++..+.......+......++.++.+||.+||+.||++|||+.++++|||+....
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~  302 (337)
T cd07852         225 IIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH  302 (337)
T ss_pred             HHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence            000000            000001111111111111122234789999999999999999999999999999997653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-33  Score=273.21  Aligned_cols=259  Identities=27%  Similarity=0.423  Sum_probs=174.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+..++..+|+|++..........+.+|++++..+ +||||+++++++.++...+   .
T Consensus         3 ~~~~~-~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~---l   77 (262)
T cd06613           3 EDYEL-IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLW---I   77 (262)
T ss_pred             cceEE-EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEE---E
Confidence            34554 46799999999999999999999999999754444456788999999987 6999999999886654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +      .|.+-                 + +              .+......               .....+ ...+
T Consensus        78 ~------~e~~~-----------------~-~--------------~l~~~~~~---------------~~~~l~-~~~~  103 (262)
T cd06613          78 V------MEYCG-----------------G-G--------------SLQDIYQV---------------TRGPLS-ELQI  103 (262)
T ss_pred             E------EeCCC-----------------C-C--------------cHHHHHHh---------------hccCCC-HHHH
Confidence            1      11000                 0 0              00000000               000000 0011


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +.                        +..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++...
T Consensus       104 ~~------------------------~~~q---l~~~l~~lh--~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~  151 (262)
T cd06613         104 AY------------------------VCRE---TLKGLAYLH--ETGKIHRDIKGANILLT---EDGDVKLADFGVSAQL  151 (262)
T ss_pred             HH------------------------HHHH---HHHHHHHHH--hCCceecCCChhhEEEC---CCCCEEECccccchhh
Confidence            10                        2233   566777887  89999999999999995   3456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        .....+|+..|+|||++...   ....++.++|+||+||++|+|++|.+||.+.+.           
T Consensus       152 ~~~~~--------~~~~~~~~~~y~~Pe~~~~~---~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----------  209 (262)
T cd06613         152 TATIA--------KRKSFIGTPYWMAPEVAAVE---RKGGYDGKCDIWALGITAIELAELQPPMFDLHP-----------  209 (262)
T ss_pred             hhhhh--------ccccccCCccccCchhhccc---ccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----------
Confidence            32211        12346789999999998631   012578899999999999999999999976431           


Q ss_pred             hhhHHHHHHHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        367 HACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                         .... ..+....+..+. .....++.++++||.+||..||..|||+++++.|||
T Consensus       210 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         210 ---MRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             ---HHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence               1111 122222221111 111346789999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=2.8e-32  Score=274.01  Aligned_cols=270  Identities=26%  Similarity=0.376  Sum_probs=173.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|.+ .+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.++.++.+||||+++++++...+...   
T Consensus        21 ~~~y~~-~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~---   95 (291)
T cd06639          21 TDTWEI-IETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV---   95 (291)
T ss_pred             CCCeEE-EEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC---
Confidence            344554 357999999999999999999999999986432 224567789999988868999999999886533211   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                              ..+..          -+.+|--+ +              .+...           +..... .....    .
T Consensus        96 --------~~~~~----------lv~ey~~~-~--------------sL~~~-----------~~~~~~-~~~~~----~  126 (291)
T cd06639          96 --------GGQLW----------LVLELCNG-G--------------SVTEL-----------VKGLLI-CGQRL----D  126 (291)
T ss_pred             --------CCeeE----------EEEEECCC-C--------------cHHHH-----------HHHhhh-cCCCC----C
Confidence                    00010          01111000 0              00000           000000 00000    0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ...+..                     +..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++..
T Consensus       127 ~~~~~~---------------------~~~q---i~~al~~lH--~~~ivH~dlkp~nili~~---~~~~kl~dfg~~~~  177 (291)
T cd06639         127 EAMISY---------------------ILYG---ALLGLQHLH--NNRIIHRDVKGNNILLTT---EGGVKLVDFGVSAQ  177 (291)
T ss_pred             HHHHHH---------------------HHHH---HHHHHHHHH--hCCeeccCCCHHHEEEcC---CCCEEEeecccchh
Confidence            000000                     2222   566777888  899999999999999954   45699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+|++.|+|||++.... .....++.++|+||+||++|+|++|++||...+.          
T Consensus       178 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~----------  238 (291)
T cd06639         178 LTSTRL--------RRNTSVGTPFWMAPEVIACEQ-QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP----------  238 (291)
T ss_pred             cccccc--------cccCccCCccccChhhhcCCC-CcccccCCccchHHHHHHHHHHhhCCCCCCCCcH----------
Confidence            432211        112457899999999985310 0112478899999999999999999999976431          


Q ss_pred             chhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        366 CHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                          ...+. .+..+. ..+...  ..++.++++||.+||..||++||++.|+++||||.
T Consensus       239 ----~~~~~-~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         239 ----VKTLF-KIPRNPPPTLLHP--EKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ----HHHHH-HHhcCCCCCCCcc--cccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence                11122 233221 111111  24678899999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=7.2e-33  Score=272.25  Aligned_cols=253  Identities=24%  Similarity=0.373  Sum_probs=172.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|.. .+.||+|+||.||+|....++..||+|.+.....  ...+.+|+++++.+ +||||+++++++.+....+    
T Consensus         3 ~~y~~-~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~----   74 (256)
T cd06612           3 EVFDI-LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLW----   74 (256)
T ss_pred             ccchh-hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEE----
Confidence            44554 4679999999999999998899999999864322  56788999999987 7999999999887653322    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      +.++  ..+.             .+...+..               .....    +.
T Consensus        75 l----------------------~~e~--~~~~-------------~L~~~l~~---------------~~~~l----~~   98 (256)
T cd06612          75 I----------------------VMEY--CGAG-------------SVSDIMKI---------------TNKTL----TE   98 (256)
T ss_pred             E----------------------EEec--CCCC-------------cHHHHHHh---------------CccCC----CH
Confidence            1                      1111  0000             00000000               00000    00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      -....                     +..+   ++.++.|+|  ++||+||||+|+||++..   .+.+||+|||++...
T Consensus        99 ~~~~~---------------------~~~~---l~~~l~~lh--~~~i~H~dl~~~ni~~~~---~~~~~l~dfg~~~~~  149 (256)
T cd06612          99 EEIAA---------------------ILYQ---TLKGLEYLH--SNKKIHRDIKAGNILLNE---EGQAKLADFGVSGQL  149 (256)
T ss_pred             HHHHH---------------------HHHH---HHHHHHHHH--HCCcccCCCCcceEEECC---CCcEEEcccccchhc
Confidence            00000                     2233   566777787  999999999999999953   456999999998755


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ......|+..|+|||++.+      ..++.++|+||+|||+|+|++|++||.......         
T Consensus       150 ~~~~~--------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~---------  206 (256)
T cd06612         150 TDTMA--------KRNTVIGTPFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR---------  206 (256)
T ss_pred             ccCcc--------ccccccCCccccCHHHHhc------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh---------
Confidence            33221        1123468999999999863      468889999999999999999999997643211         


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                            ....+.... ..+..  ...++.++.+||.+||..||++|||+.|+|.||||
T Consensus       207 ------~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         207 ------AIFMIPNKPPPTLSD--PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             ------hhhhhccCCCCCCCc--hhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence                  111111111 11111  12478899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=6.6e-33  Score=279.32  Aligned_cols=260  Identities=27%  Similarity=0.392  Sum_probs=179.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|++ .+.||+|+||.||++.+..++..||+|.+..........+.+|+.++..+ +||||+++++++......+  
T Consensus        17 ~~~~~~~-~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~--   92 (293)
T cd06647          17 PKKKYTR-FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELW--   92 (293)
T ss_pred             chhhcee-eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEE--
Confidence            3456665 47899999999999999989999999998654444456788899999887 5999999999887654332  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      .|.+-                   +.             .+...+..                 ...    
T Consensus        93 -lv------~e~~~-------------------~~-------------~L~~~~~~-----------------~~l----  112 (293)
T cd06647          93 -VV------MEYLA-------------------GG-------------SLTDVVTE-----------------TCM----  112 (293)
T ss_pred             -EE------EecCC-------------------CC-------------cHHHHHhh-----------------cCC----
Confidence             11      11100                   00             00000000                 000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                         +...+.                  .+..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++.
T Consensus       113 ---~~~~~~------------------~i~~~---l~~al~~LH--~~gi~H~dL~p~Nili~~---~~~~kL~dfg~~~  163 (293)
T cd06647         113 ---DEGQIA------------------AVCRE---CLQALEFLH--SNQVIHRDIKSDNILLGM---DGSVKLTDFGFCA  163 (293)
T ss_pred             ---CHHHHH------------------HHHHH---HHHHHHHHH--hCCEeeccCCHHHEEEcC---CCCEEEccCccee
Confidence               000000                  02233   566778888  999999999999999953   4569999999986


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        .....+|++.|+|||.+..      ..++.++|+||+||++|+|++|++||...+..+       
T Consensus       164 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~-------  222 (293)
T cd06647         164 QITPEQS--------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------  222 (293)
T ss_pred             ccccccc--------ccccccCChhhcCchhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh-------
Confidence            5432221        1224579999999999853      357889999999999999999999997654221       


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                             .+......+...++  .+..++..+++||.+||..||++||++++++.||||....
T Consensus       223 -------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         223 -------ALYLIATNGTPELQ--NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             -------heeehhcCCCCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence                   11111112222232  2346788999999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=6e-33  Score=273.65  Aligned_cols=249  Identities=30%  Similarity=0.478  Sum_probs=175.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||.|+||.||+|.+..++..||+|++.+...   .....+.+|++++.++ +||||++++++++++...+   .|  
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv--   78 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMY---LV--   78 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEE---EE--
Confidence            4689999999999999999999999999975322   2345788899999987 6999999999887654332   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                           .+|--+ +              .+...+....-+.++.+                    
T Consensus        79 ---------------------~e~~~~-~--------------~L~~~l~~~~~l~~~~~--------------------  102 (258)
T cd05578          79 ---------------------VDLLLG-G--------------DLRYHLSQKVKFSEEQV--------------------  102 (258)
T ss_pred             ---------------------EeCCCC-C--------------CHHHHHHhcCCcCHHHH--------------------
Confidence                                 111000 0              00000000000000000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           ..|..+   ++.++.|+|  .+||+|+||||+||++.   ..+.++|+|||++......
T Consensus       103 ---------------------~~~~~~---i~~~l~~lh--~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578         103 ---------------------KFWICE---IVLALEYLH--SKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             ---------------------HHHHHH---HHHHHHHHH--hCCeeccCCCHHHeEEc---CCCCEEEeecccccccCCC
Confidence                                 013334   677788888  99999999999999995   4456999999998754322


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         ......|+..|+|||++..      ..++.++|+||+||++|+|++|..||...+..            .
T Consensus       154 ~---------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------------~  206 (258)
T cd05578         154 T---------LTTSTSGTPGYMAPEVLCR------QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------------I  206 (258)
T ss_pred             c---------cccccCCChhhcCHHHHcc------cCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------------H
Confidence            1         1234578999999999863      34788999999999999999999999865421            1


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH--HHHhcCCCc
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA--ASVLKHPWI  423 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta--~e~l~Hpw~  423 (539)
                      ...+...+......+|.    .++.++.++|++||..||.+|+++  +|+++||||
T Consensus       207 ~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         207 RDQIRAKQETADVLYPA----TWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHHhccccccCcc----cCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            22233333333444443    578999999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0584|consensus

Probab=100.00  E-value=9.2e-34  Score=293.10  Aligned_cols=253  Identities=25%  Similarity=0.456  Sum_probs=188.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEec--cC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIID--KL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~--k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .++||+|+|-+||+|.+..+|.+||--.++  +.  ......++..|+++|+.+ .|||||++++++.+..+..    | 
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~~----i-  118 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNKT----I-  118 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCce----e-
Confidence            468999999999999999999999864442  22  223347899999999987 5999999999998765421    1 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                             |+.-                                 ++++ .||        ++.+... -...+.+    +
T Consensus       119 -------n~iT---------------------------------EL~T-SGt--------Lr~Y~kk-~~~vn~k----a  144 (632)
T KOG0584|consen  119 -------NFIT---------------------------------ELFT-SGT--------LREYRKK-HRRVNIK----A  144 (632)
T ss_pred             -------eeee---------------------------------eccc-CCc--------HHHHHHH-hccCCHH----H
Confidence                   1110                                 1111 233        1111000 0011111    0


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                           --.|-||   ++.++.|+|.|.--|||||||-+||+++  +..|.|||.|+|||+....
T Consensus       145 ---------------------ik~W~RQ---ILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  145 ---------------------IKSWCRQ---ILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             ---------------------HHHHHHH---HHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhc
Confidence                                 0118888   9999999998888899999999999996  6678999999999986543


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ..          ....+|||.|||||+..       ..|+..+||||+|..+-||+|+..|+....              
T Consensus       199 s~----------aksvIGTPEFMAPEmYE-------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--------------  247 (632)
T KOG0584|consen  199 SH----------AKSVIGTPEFMAPEMYE-------ENYNELVDVYAFGMCMLEMVTSEYPYSECT--------------  247 (632)
T ss_pred             cc----------cceeccCccccChHHHh-------hhcchhhhhhhhhHHHHHHHhccCChhhhC--------------
Confidence            22          23468999999999984       579999999999999999999999996532              


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCC-CCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWST-ISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~-~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .+..+++++.+|.-  |. .+.. -.+++++||.+||.. .+.|+||.|+|+||||+..
T Consensus       248 n~AQIYKKV~SGiK--P~-sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  248 NPAQIYKKVTSGIK--PA-ALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             CHHHHHHHHHcCCC--HH-HhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence            35679999998852  11 1112 268999999999999 8999999999999999865

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.9e-32  Score=268.27  Aligned_cols=250  Identities=26%  Similarity=0.367  Sum_probs=175.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .++||+|+||.||.+++..++..+++|.++...  .....++.+|+++++++ +|+||+++++++.+....+   .+   
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~---~~---   77 (256)
T cd08221           5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLL---IE---   77 (256)
T ss_pred             eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEE---EE---
Confidence            468999999999999999999999999986432  23345678999999997 6999999999987654322   01   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                          .++--+ +              .+...+...        .      ....+. ..+    
T Consensus        78 --------------------~e~~~~-~--------------~L~~~~~~~--------~------~~~~~~-~~~----  103 (256)
T cd08221          78 --------------------MEYANG-G--------------TLYDKIVRQ--------K------GQLFEE-EMV----  103 (256)
T ss_pred             --------------------EEecCC-C--------------cHHHHHHhc--------c------ccCCCH-HHH----
Confidence                                111000 0              000000000        0      000000 000    


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++.......
T Consensus       104 --------------------~~~~~~---l~~~l~~lh--~~~i~h~dl~p~ni~~~~---~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221         104 --------------------LWYLFQ---IVSAVSYIH--KAGILHRDIKTLNIFLTK---AGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--hCCccccCCChHhEEEeC---CCCEEECcCcceEEccccc
Confidence                                002233   566777787  999999999999999954   4569999999987543322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......||+.|+|||++.+      ..++.++|+||+||++|+|++|..||.+.+               .
T Consensus       156 ~--------~~~~~~~~~~y~ape~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---------------~  206 (256)
T cd08221         156 S--------MAETVVGTPYYMSPELCQG------VKYNFKSDIWALGCVLYELLTLKRTFDATN---------------P  206 (256)
T ss_pred             c--------cccccCCCccccCHhhcCC------CCCCCcchhHHHHHHHHHHHHCCCCCCCCC---------------H
Confidence            1        1235679999999999863      347788999999999999999999997643               1


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ......+..+.+....   ..++.++++||.+||..||.+||+++++|+|||+
T Consensus       207 ~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         207 LNLVVKIVQGNYTPVV---SVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHHcCCCCCCc---cccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            2344555555543322   4578999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-32  Score=283.55  Aligned_cols=146  Identities=23%  Similarity=0.348  Sum_probs=109.6

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++.+.......      ...+..++..|+|||++.+ 
T Consensus       182 i~~aL~~lH--~~~ivHrDikp~Nill~~---~~~vkL~DfG~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-  249 (337)
T cd05054         182 VARGMEFLA--SRKCIHRDLAARNILLSE---NNVVKICDFGLARDIYKDPDYV------RKGDARLPLKWMAPESIFD-  249 (337)
T ss_pred             HHHHHHHHH--hCCeecCCCCcceEEEeC---CCcEEEeccccchhcccCcchh------hccCCCCCccccCcHHhcC-
Confidence            667778888  999999999999999953   4569999999987653221100      1123456778999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAK  397 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~  397 (539)
                           ..|+.++||||+||++|+|++ |.+||.+....              +.+...+..+.. ..|    ...++++.
T Consensus       250 -----~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~~~  306 (337)
T cd05054         250 -----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--------------EEFCRRLKEGTRMRAP----EYATPEIY  306 (337)
T ss_pred             -----CCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--------------HHHHHHHhccCCCCCC----ccCCHHHH
Confidence                 568999999999999999998 99999764321              123333443322 222    25688999


Q ss_pred             HHHHHhccccccCCCCHHHHhcC
Q psy16343        398 DLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       398 dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      +++.+||+.+|++||+++|+++|
T Consensus       307 ~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         307 SIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG4250|consensus

Probab=100.00  E-value=1.4e-33  Score=295.13  Aligned_cols=208  Identities=31%  Similarity=0.427  Sum_probs=146.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+||||.||+++++.||+.||||.+++. ....+++..+|+++|+++. |||||++++.=++... .         
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~-~---------   86 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFL-G---------   86 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-chhhhhhcccCCcccc-C---------
Confidence            46899999999999999999999999999753 2345678889999999985 9999999986655432 1         


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                            ++    ....+-+..|+-+ +              .+....     -.||...++++.+               
T Consensus        87 ------~~----~~~~vlvmEyC~g-G--------------sL~~~L-----~~PEN~~GLpE~e---------------  121 (732)
T KOG4250|consen   87 ------LV----TRLPVLVMEYCSG-G--------------SLRKVL-----NSPENAYGLPESE---------------  121 (732)
T ss_pred             ------cc----cccceEEEeecCC-C--------------cHHHHh-----cCcccccCCCHHH---------------
Confidence                  00    0111333444322 1              111111     1244333322210               


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-CCCceeccCCCccccccCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-LSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-~~~ikl~DFGla~~~~~~~  290 (539)
                       +..                 +.+.   +..|+.|+|  .+|||||||||+||++....+ ..--||+|||.|+.+..+.
T Consensus       122 -~l~-----------------lL~d---~~~al~~Lr--En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s  178 (732)
T KOG4250|consen  122 -FLD-----------------LLSD---LVSALRHLR--ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS  178 (732)
T ss_pred             -HHH-----------------HHHH---HHHHHHHHH--HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence             001                 1111   445566666  999999999999999865432 2235999999999876543


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  353 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~  353 (539)
                               .+.+.+||+.|.+||++-+     ...|+..||.||+||++|+.+||..||...
T Consensus       179 ---------~~~S~vGT~~YLhPel~E~-----q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  179 ---------LFTSLVGTEEYLHPELYER-----QKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             ---------eeeeecCchhhcChHHHhh-----ccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence                     4678999999999999863     357999999999999999999999999753

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=2.4e-32  Score=277.03  Aligned_cols=256  Identities=25%  Similarity=0.347  Sum_probs=175.5

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      ..|.. .+.||+|+||.||+|.+..+++.||+|.+......   ....+.+|++++..+ +||||+++++++.+....+ 
T Consensus        15 ~~y~~-~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~-   91 (307)
T cd06607          15 KLFTD-LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAW-   91 (307)
T ss_pred             hhhhh-heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEE-
Confidence            34554 46799999999999999999999999998643222   224578899999987 5999999999987654332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      .|.+.                 +...             .......  ..+..+.+              
T Consensus        92 --lv------~e~~~-----------------g~l~-------------~~~~~~~--~~l~~~~~--------------  117 (307)
T cd06607          92 --LV------MEYCL-----------------GSAS-------------DILEVHK--KPLQEVEI--------------  117 (307)
T ss_pred             --EE------HHhhC-----------------CCHH-------------HHHHHcc--cCCCHHHH--------------
Confidence              11      11100                 0000             0000000  00000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++
T Consensus       118 ---------------------------~~~~~q---l~~~L~~LH--~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~  162 (307)
T cd06607         118 ---------------------------AAICHG---ALQGLAYLH--SHERIHRDIKAGNILLT---EPGTVKLADFGSA  162 (307)
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--HCCceecCCCcccEEEC---CCCCEEEeecCcc
Confidence                                       002333   667788888  99999999999999994   4456999999987


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .....            ..+..|++.|+|||++...   ....++.++|+||+||++|+|++|.+||.+.+.        
T Consensus       163 ~~~~~------------~~~~~~~~~y~aPE~~~~~---~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~--------  219 (307)
T cd06607         163 SLVSP------------ANSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------  219 (307)
T ss_pred             eecCC------------CCCccCCccccCceeeecc---CCCCCCcccchHHHHHHHHHHHcCCCCCCCccH--------
Confidence            64321            1245789999999988531   124578899999999999999999999976431        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            ....+.......+.++..   .++.++++||.+||..||++||++.+++.||||...
T Consensus       220 ------~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         220 ------MSALYHIAQNDSPTLSSN---DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             ------HHHHHHHhcCCCCCCCch---hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence                  122222222333333332   357899999999999999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.1e-32  Score=282.22  Aligned_cols=263  Identities=22%  Similarity=0.281  Sum_probs=163.5

Q ss_pred             eecee--CceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         55 ILGKG--AYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        55 ~LG~G--~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .||+|  +||+||+|.+..+|+.||||++.....  ...+.+.+|+.++..+ +||||++++++|..+...+   .+   
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~---~v---   77 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLW---VI---   77 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceE---EE---
Confidence            46666  999999999999999999999864322  1234567788877765 6999999999997754432   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .+.+              ..|-..               .+........ + ||..                   +.
T Consensus        78 ---~e~~--------------~~~~l~---------------~~l~~~~~~~-~-~~~~-------------------~~  104 (328)
T cd08226          78 ---SPFM--------------AYGSAN---------------SLLKTYFPEG-M-SEAL-------------------IG  104 (328)
T ss_pred             ---Eecc--------------cCCCHH---------------HHHHhhcccC-C-CHHH-------------------HH
Confidence               0100              000000               0000000000 0 0000                   00


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++.++.|+|  ++||+||||||+|||+..   .+.+|++|||.+.......
T Consensus       105 ---------------------~~~~q---i~~aL~~lH--~~~ivHrDlkp~Nill~~---~~~~~~~~~~~~~~~~~~~  155 (328)
T cd08226         105 ---------------------NILFG---ALRGLNYLH--QNGYIHRNIKASHILISG---DGLVSLSGLSHLYSLVRNG  155 (328)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEeC---CCcEEEechHHHhhhhccC
Confidence                                 03334   677788888  999999999999999953   4568999997543221111


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .... ..........++..|+|||++.+    ....|+.++|+||+||++|+|++|.+||.+.....             
T Consensus       156 ~~~~-~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~-------------  217 (328)
T cd08226         156 QKAK-VVYDFPQFSTSVLPWLSPELLRQ----DLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ-------------  217 (328)
T ss_pred             cccc-ccccccccccCccCccChhhhcC----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH-------------
Confidence            0000 00000012245678999999863    12357899999999999999999999997643110             


Q ss_pred             HHHHHHHhcCCC-------------------------------------------CCCCCCCCCCCHHHHHHHHHhcccc
Q psy16343        371 EILFHSIQQGHY-------------------------------------------DFPEGEWSTISDEAKDLIRRLLVKD  407 (539)
Q Consensus       371 ~~~~~~i~~~~~-------------------------------------------~~p~~~~~~~s~~~~dli~~lL~~d  407 (539)
                       .+...+. +..                                           ......+...++++++||++||+.|
T Consensus       218 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  295 (328)
T cd08226         218 -MLLQKLK-GPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQD  295 (328)
T ss_pred             -HHHHHhc-CCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCC
Confidence             0000000 000                                           0001112346788999999999999


Q ss_pred             ccCCCCHHHHhcCCCccCC
Q psy16343        408 ARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       408 P~~R~ta~e~l~Hpw~~~~  426 (539)
                      |++|||++|+|+||||...
T Consensus       296 P~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         296 PEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             cccCCCHHHHhhCHHHHHH
Confidence            9999999999999999753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-32  Score=281.51  Aligned_cols=282  Identities=26%  Similarity=0.341  Sum_probs=175.9

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|.+..++..||||++.+..  ......+.+|+++++.+ +||||+++++++.........  
T Consensus         2 y~i-~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~--   77 (330)
T cd07834           2 YEL-LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFN--   77 (330)
T ss_pred             cee-eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCccccc--
Confidence            444 468999999999999999999999999986532  23345788999999987 599999999988765411000  


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                               .+.+          +.++. . .              .+...+.....+..+                   
T Consensus        78 ---------~~~l----------v~e~~-~-~--------------~l~~~l~~~~~l~~~-------------------  103 (330)
T cd07834          78 ---------DVYI----------VTELM-E-T--------------DLHKVIKSPQPLTDD-------------------  103 (330)
T ss_pred             ---------ceEE----------Eecch-h-h--------------hHHHHHhCCCCCCHH-------------------
Confidence                     0000          01110 0 0              000000000000000                   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       ..                     ..+..+   ++.++.++|  ++||+||||||+|||+..   .+.++|+|||++...
T Consensus       104 -~~---------------------~~i~~~---l~~~l~~LH--~~gi~H~dlkp~nili~~---~~~~~L~dfg~~~~~  153 (330)
T cd07834         104 -HI---------------------QYFLYQ---ILRGLKYLH--SANVIHRDLKPSNILVNS---NCDLKICDFGLARGV  153 (330)
T ss_pred             -HH---------------------HHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEcC---CCCEEEcccCceEee
Confidence             00                     002333   667777787  899999999999999953   467999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......     ........||+.|+|||++.+     ...++.++|+||+||++|+|++|.+||.+.+..+.........
T Consensus       154 ~~~~~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  223 (330)
T cd07834         154 DPDEDE-----KGFLTEYVVTRWYRAPELLLS-----SSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVL  223 (330)
T ss_pred             cccccc-----cccccccccccCcCCceeeec-----ccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhc
Confidence            332110     012334578999999999864     2268889999999999999999999998764211000000000


Q ss_pred             hhh---------HHHHHHHHhcCCCCCC---CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        367 HAC---------QEILFHSIQQGHYDFP---EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       367 ~~~---------~~~~~~~i~~~~~~~p---~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ...         .......+......-+   ......++.++.+||.+||.+||.+|||++++++||||.....
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             CCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence            000         0000000000000000   0001347889999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0587|consensus

Probab=100.00  E-value=1.2e-32  Score=293.06  Aligned_cols=263  Identities=26%  Similarity=0.393  Sum_probs=189.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .++||.|.||.||+++++.+++..||||+.-. ....+.+..|.++|+...+|||++.++.+|-..+...          
T Consensus        24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~----------   92 (953)
T KOG0587|consen   24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN----------   92 (953)
T ss_pred             EEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC----------
Confidence            46899999999999999999999999998532 2334567788889998889999999998885432211          


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       .+.+=+          |..|+-| |                     +    .-++++++.       +.+.+.=...+|
T Consensus        93 -~DqLWL----------VMEfC~g-G---------------------S----VTDLVKn~~-------g~rl~E~~IaYI  128 (953)
T KOG0587|consen   93 -GDQLWL----------VMEFCGG-G---------------------S----VTDLVKNTK-------GNRLKEEWIAYI  128 (953)
T ss_pred             -CCeEEE----------EeeccCC-c---------------------c----HHHHHhhhc-------ccchhhHHHHHH
Confidence             111111          2233211 1                     0    001111110       112222223344


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                      +++.+                          +.+.|+|.+.|+|||||-.|||++.+   +.|||+|||++..+..... 
T Consensus       129 ~re~l--------------------------rgl~HLH~nkviHRDikG~NiLLT~e---~~VKLvDFGvSaQldsT~g-  178 (953)
T KOG0587|consen  129 LREIL--------------------------RGLAHLHNNKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDSTVG-  178 (953)
T ss_pred             HHHHH--------------------------HHHHHHhhcceeeecccCceEEEecc---CcEEEeeeeeeeeeecccc-
Confidence            44433                          44678889999999999999999754   4599999999887654332 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             .-.|++|||.||||||+.+.... ...|+.+||+||||++.-||.-|.|||....+              ...
T Consensus       179 -------rRnT~iGtP~WMAPEViac~e~~-d~tyd~R~D~WsLGITaIEladG~PPl~DmHP--------------mra  236 (953)
T KOG0587|consen  179 -------RRNTFIGTPYWMAPEVIACDESP-DATYDYRSDLWSLGITAIEMAEGAPPLCDMHP--------------MRA  236 (953)
T ss_pred             -------cccCcCCCcccccceeeecccCC-CCCcccccchhhccceeehhcCCCCCccCcch--------------hhh
Confidence                   23589999999999999864333 34689999999999999999999999976532              345


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      +|..+++.++.+-  .|...|.++-|||+.||.+|-.+||+..++|+|||++
T Consensus       237 LF~IpRNPPPkLk--rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  237 LFLIPRNPPPKLK--RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             hccCCCCCCcccc--chhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence            6666665555443  2567799999999999999999999999999999997

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=3.4e-32  Score=267.83  Aligned_cols=249  Identities=24%  Similarity=0.406  Sum_probs=172.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||++.+..+++.||+|.+...  .......+.+|+.+++.+ +||||++++++++.....+   .|   
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---lv---   77 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLY---IV---   77 (256)
T ss_pred             EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEE---EE---
Confidence            46799999999999999999999999998643  222345688899999987 5999999999987654322   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .|.+.                 + +              .+...+..              ....... ...+    
T Consensus        78 ---~e~~~-----------------~-~--------------~l~~~~~~--------------~~~~~~~-~~~~----  103 (256)
T cd08218          78 ---MDYCE-----------------G-G--------------DLYKKINA--------------QRGVLFP-EDQI----  103 (256)
T ss_pred             ---EecCC-----------------C-C--------------cHHHHHHh--------------ccCCCCC-HHHH----
Confidence               11110                 0 0              00000000              0000000 0000    


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..|..+   ++.++.|+|  ++||+|+||||+|||+.   ..+.++|+|||++.......
T Consensus       104 --------------------~~~~~~---l~~~l~~lh--~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218         104 --------------------LDWFVQ---ICLALKHVH--DRKILHRDIKSQNIFLT---KDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--hCCEecCCCCHHHEEEc---CCCCEEEeeccceeecCcch
Confidence                                002333   667778888  89999999999999994   34569999999987543211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......|++.|+|||++..      ..++.++|+||+||++|+|++|..||....               .
T Consensus       156 ~--------~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---------------~  206 (256)
T cd08218         156 E--------LARTCIGTPYYLSPEICEN------RPYNNKSDIWALGCVLYEMCTLKHAFEAGN---------------M  206 (256)
T ss_pred             h--------hhhhccCCccccCHHHhCC------CCCCCccchhHHHHHHHHHHcCCCCccCCC---------------H
Confidence            1        1124568999999999863      357789999999999999999999997542               1


Q ss_pred             HHHHHHHhcCCCC-CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~~-~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ......+..+... .+    ..++.++++||.+||..||++||++.++++||||
T Consensus       207 ~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         207 KNLVLKIIRGSYPPVS----SHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHhcCCCCCCc----ccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            2234444444432 22    3578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=4.6e-32  Score=268.53  Aligned_cols=258  Identities=25%  Similarity=0.399  Sum_probs=169.6

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-----CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-----HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-----~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|++ ++.||+|+||.||++.+..++..||||.+.....     .....+.+|++++.++ +||||+++++++.+.....
T Consensus         3 ~~~~-~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           3 NWRL-GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             cceE-eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence            3444 5789999999999999999999999998853211     1134577899999987 6999999999876542211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .  -+                      +.++.-+ +              .+...           +..    . ...  
T Consensus        81 ~--~~----------------------v~e~~~~-~--------------~L~~~-----------l~~----~-~~~--  103 (265)
T cd06652          81 L--SI----------------------FMEHMPG-G--------------SIKDQ-----------LKS----Y-GAL--  103 (265)
T ss_pred             E--EE----------------------EEEecCC-C--------------cHHHH-----------HHH----c-CCC--
Confidence            0  00                      1111000 0              00000           000    0 000  


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       ...|.                      ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       104 -~~~~~----------------------~~~~~~---l~~~l~~lH--~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~  152 (265)
T cd06652         104 -TENVT----------------------RKYTRQ---ILEGVSYLH--SNMIVHRDIKGANILRD---SVGNVKLGDFGA  152 (265)
T ss_pred             -CHHHH----------------------HHHHHH---HHHHHHHHH--hCCEecCCCCHHHEEec---CCCCEEECcCcc
Confidence             00000                      002233   667778888  99999999999999994   445699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.......     ........+||..|+|||++..      ..++.++|+||+||++|+|++|++||.+...       
T Consensus       153 ~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-------  214 (265)
T cd06652         153 SKRLQTICL-----SGTGMKSVTGTPYWMSPEVISG------EGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-------  214 (265)
T ss_pred             ccccccccc-----cccccccCCCCccccChhhhcC------CCCCcchhHHHHHHHHHHHhhCCCCCCccch-------
Confidence            875432110     0011234579999999999853      4578899999999999999999999975421       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                             .... ..+..... .+. ....++..+.++|++||. +|++||+++|+++|||+.
T Consensus       215 -------~~~~-~~~~~~~~-~~~-~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         215 -------MAAI-FKIATQPT-NPV-LPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             -------HHHH-HHHhcCCC-CCC-CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence                   1112 22222211 111 113578999999999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.98  E-value=2.6e-32  Score=274.09  Aligned_cols=260  Identities=30%  Similarity=0.452  Sum_probs=176.9

Q ss_pred             CceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         53 GEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.||+|+||.||+|...   .+|..||+|++.+..    ......+.+|++++..+.+|+||+.++++|+.+...+   
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~---   81 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH---   81 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE---
Confidence            467999999999999874   478999999986422    1223567789999999878999999998887654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      .|.+-                 + +              .+...+........+                  
T Consensus        82 lv------~e~~~-----------------~-~--------------~L~~~l~~~~~l~~~------------------  105 (290)
T cd05613          82 LI------LDYIN-----------------G-G--------------ELFTHLSQRERFKEQ------------------  105 (290)
T ss_pred             EE------EecCC-----------------C-C--------------cHHHHHHHcCCCCHH------------------
Confidence            11      11110                 0 0              000000000000000                  


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                        .+..                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       106 --~~~~---------------------~~~q---i~~al~~lH--~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~  154 (290)
T cd05613         106 --EVQI---------------------YSGE---IVLALEHLH--KLGIIYRDIKLENILLD---SNGHVVLTDFGLSKE  154 (290)
T ss_pred             --HHHH---------------------HHHH---HHHHHHHHH--hCCeeccCCCHHHeEEC---CCCCEEEeeCcccee
Confidence              0000                     2223   566777887  99999999999999995   346799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......+|+..|+|||++...    ...++.++|+||+||++|+|++|..||.......        
T Consensus       155 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--------  215 (290)
T cd05613         155 FHEDEV-------ERAYSFCGTIEYMAPDIVRGG----DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--------  215 (290)
T ss_pred             cccccc-------cccccccCCcccCChhhccCC----CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--------
Confidence            433211       112356799999999998531    2357789999999999999999999996532211        


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                         ....+...+......+|.    .+++.+.+||++||..||++|+     ++++++.||||....+
T Consensus       216 ---~~~~~~~~~~~~~~~~~~----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  276 (290)
T cd05613         216 ---SQAEISRRILKSEPPYPQ----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW  276 (290)
T ss_pred             ---cHHHHHHHhhccCCCCCc----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence               122344444444444443    5789999999999999999997     7899999999986543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.98  E-value=3.2e-32  Score=267.66  Aligned_cols=249  Identities=24%  Similarity=0.335  Sum_probs=171.7

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|.+..++..+|||.+....  ......+.+|+++++.+ +||||+++++.+..+...+   .|   
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---lv---   77 (256)
T cd08220           5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALM---IV---   77 (256)
T ss_pred             EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEE---EE---
Confidence            467999999999999999999999999986532  22345678899999987 5999999998886544322   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                          .++--+ +              .+...+..        .      ......       ..
T Consensus        78 --------------------~e~~~~-~--------------~L~~~~~~--------~------~~~~~~-------~~  101 (256)
T cd08220          78 --------------------MEYAPG-G--------------TLAEYIQK--------R------CNSLLD-------ED  101 (256)
T ss_pred             --------------------EecCCC-C--------------CHHHHHHH--------h------cccCCC-------HH
Confidence                                111000 0              00000000        0      000000       00


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .+                  ..+..+   ++.++.|+|  ++||+||||||+||++..+  ...+||+|||++.......
T Consensus       102 ~~------------------~~~~~~---i~~~l~~lh--~~~i~h~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220         102 TI------------------LHFFVQ---ILLALHHVH--TKLILHRDLKTQNILLDKH--KMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             HH------------------HHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEcCC--CCEEEEccCCCceecCCCc
Confidence            00                  002223   566777777  9999999999999999533  2357999999987553321


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                               .....+|++.|+|||++..      ..++.++|+||+||++|+|++|..||.+.+.               
T Consensus       157 ---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---------------  206 (256)
T cd08220         157 ---------KAYTVVGTPCYISPELCEG------KPYNQKSDIWALGCVLYELASLKRAFEAANL---------------  206 (256)
T ss_pred             ---------cccccccCCcccCchhccC------CCCCcccchHHHHHHHHHHHhCCCCcccCch---------------
Confidence                     1224578999999999863      4577899999999999999999999976532               


Q ss_pred             HHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ......+..+. ..++    ..++.++++||.+||..||++|||+.|+++||||
T Consensus       207 ~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         207 PALVLKIMSGTFAPIS----DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHHHHHHhcCCCCCC----CCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            12333343332 2233    3578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.98  E-value=3.1e-32  Score=272.35  Aligned_cols=261  Identities=26%  Similarity=0.400  Sum_probs=167.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhc--CCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|.+..++..||+|++.....  .....+.+|+.++.++.  +||||+++++++.+.....      
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~------   77 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR------   77 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC------
Confidence            4679999999999999988899999999964322  12335667888877664  5999999999987653210      


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           ...+.+          +.++  ..+              .+..      |     +...   ...... ...++ 
T Consensus        78 -----~~~~~l----------~~e~--~~~--------------~l~~------~-----l~~~---~~~~l~-~~~~~-  110 (287)
T cd07838          78 -----ELKLTL----------VFEH--VDQ--------------DLAT------Y-----LSKC---PKPGLP-PETIK-  110 (287)
T ss_pred             -----CceeEE----------Eehh--ccc--------------CHHH------H-----HHHc---cCCCCC-HHHHH-
Confidence                 000000          1111  000              0000      0     0000   000000 00000 


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                             .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++.....
T Consensus       111 -----------------------~~~~~---i~~al~~LH--~~~i~h~~l~~~nili~~---~~~~~l~dfg~~~~~~~  159 (287)
T cd07838         111 -----------------------DLMRQ---LLRGVDFLH--SHRIVHRDLKPQNILVTS---DGQVKIADFGLARIYSF  159 (287)
T ss_pred             -----------------------HHHHH---HHHHHHHHH--HCCeeeccCChhhEEEcc---CCCEEEeccCcceeccC
Confidence                                   02333   667788888  899999999999999953   46799999999875533


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ...         .....|++.|+|||++.+      ..++.++|+||+||++|+|++|.+||.+.+..+.          
T Consensus       160 ~~~---------~~~~~~~~~~~~PE~~~~------~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~----------  214 (287)
T cd07838         160 EMA---------LTSVVVTLWYRAPEVLLQ------SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ----------  214 (287)
T ss_pred             Ccc---------cccccccccccChHHhcc------CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH----------
Confidence            221         223468899999999863      4578899999999999999999999987542210          


Q ss_pred             hHHHHHHHHhc-CCCC-----------CC-------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        369 CQEILFHSIQQ-GHYD-----------FP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       369 ~~~~~~~~i~~-~~~~-----------~p-------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                       ...++..+.. +...           ++       ......+++++.+||.+||..||++||+++|+++||||
T Consensus       215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         215 -LDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             -HHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence             0111111100 0000           00       01112467889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG4721|consensus

Probab=99.98  E-value=2.2e-33  Score=285.23  Aligned_cols=244  Identities=27%  Similarity=0.400  Sum_probs=173.9

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .|+.+-++  +.||.|+-|.||.|+.  .++.||||.++..       -..+|+-|+++ +|||||.+..+|....-+. 
T Consensus       122 PFe~IsEL--eWlGSGaQGAVF~Grl--~netVAVKKV~el-------kETdIKHLRkL-kH~NII~FkGVCtqsPcyC-  188 (904)
T KOG4721|consen  122 PFEEISEL--EWLGSGAQGAVFLGRL--HNETVAVKKVREL-------KETDIKHLRKL-KHPNIITFKGVCTQSPCYC-  188 (904)
T ss_pred             CHHHhhhh--hhhccCcccceeeeec--cCceehhHHHhhh-------hhhhHHHHHhc-cCcceeeEeeeecCCceeE-
Confidence            35555553  6899999999999874  5678999988532       23578888886 5999999999986654333 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                  .+              .+.++...-.-+.|+.+.             
T Consensus       189 --Ii------MEfCa------------------~G--------------qL~~VLka~~~itp~llv-------------  215 (904)
T KOG4721|consen  189 --II------MEFCA------------------QG--------------QLYEVLKAGRPITPSLLV-------------  215 (904)
T ss_pred             --Ee------eeccc------------------cc--------------cHHHHHhccCccCHHHHH-------------
Confidence              12      22221                  11              122222222223344331             


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                  .|..+   ++.+..|+|  .+.|||||||.-||||..++.   |||+|||-+
T Consensus       216 ----------------------------~Wsk~---IA~GM~YLH--~hKIIHRDLKSPNiLIs~~d~---VKIsDFGTS  259 (904)
T KOG4721|consen  216 ----------------------------DWSKG---IAGGMNYLH--LHKIIHRDLKSPNILISYDDV---VKISDFGTS  259 (904)
T ss_pred             ----------------------------HHHHH---hhhhhHHHH--HhhHhhhccCCCceEeeccce---EEeccccch
Confidence                                        15556   888899999  667999999999999976554   899999988


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         ..+.||||..|||||||..      +..+.++||||+||+|++||||..||..-+.....|..+
T Consensus       260 ~e~~~~S---------TkMSFaGTVaWMAPEvIrn------ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVG  324 (904)
T KOG4721|consen  260 KELSDKS---------TKMSFAGTVAWMAPEVIRN------EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVG  324 (904)
T ss_pred             Hhhhhhh---------hhhhhhhhHhhhCHHHhhc------CCcccccceehhHHHHHHHHhcCCCccccchheeEEecc
Confidence            7554321         2468999999999999973      678899999999999999999999997543222222211


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP  421 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hp  421 (539)
                                     ...+.+|-+  ...++.++=||+.|+.-.|..||+..++|.|=
T Consensus       325 ---------------sNsL~LpvP--stcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  325 ---------------SNSLHLPVP--STCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             ---------------CCcccccCc--ccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence                           112222221  35678899999999999999999999999984

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.98  E-value=4.4e-32  Score=274.59  Aligned_cols=151  Identities=18%  Similarity=0.193  Sum_probs=103.9

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++........      ....+..+|..|+|||++.. 
T Consensus       147 i~~al~~lH--~~~ivH~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~-  214 (304)
T cd05096         147 IASGMKYLS--SLNFVHRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYY------RIQGRAVLPIRWMAWECILM-  214 (304)
T ss_pred             HHHHHHHHH--HCCccccCcchhheEEc---CCccEEECCCccceecccCcee------EecCcCCCCccccCHHHHhc-
Confidence            667788888  89999999999999995   3456999999998754322110      01123466889999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh--CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC--GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAK  397 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~--G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~  397 (539)
                           ..|+.++|+|||||++|+|++  |..||.+.+..+           ........................+..++
T Consensus       215 -----~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (304)
T cd05096         215 -----GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQ-----------VIENAGEFFRDQGRQVYLFRPPPCPQGLY  278 (304)
T ss_pred             -----CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHH-----------HHHHHHHHhhhccccccccCCCCCCHHHH
Confidence                 458899999999999999986  567887643211           00000011111110000011135688999


Q ss_pred             HHHHHhccccccCCCCHHHHh
Q psy16343        398 DLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       398 dli~~lL~~dP~~R~ta~e~l  418 (539)
                      +||.+||..||++|||++|+.
T Consensus       279 ~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         279 ELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             HHHHHHccCCchhCcCHHHHH
Confidence            999999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.98  E-value=1.7e-32  Score=274.53  Aligned_cols=270  Identities=26%  Similarity=0.417  Sum_probs=172.3

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |++ .+.||+|+||.||+|.+..+++.||||+++...  ......+.+|+++++.+. |+||+++++++.++...+    
T Consensus         3 y~~-~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~----   76 (288)
T cd07833           3 YEV-LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLY----   76 (288)
T ss_pred             eeE-EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEE----
Confidence            444 467999999999999999999999999986432  223467889999999875 999999999987644322    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      ++                      .+|.-+ .              .+......                ....+ ...+
T Consensus        77 iv----------------------~e~~~~-~--------------~l~~~~~~----------------~~~~~-~~~~  102 (288)
T cd07833          77 LV----------------------FEYVER-T--------------LLELLEAS----------------PGGLP-PDAV  102 (288)
T ss_pred             EE----------------------EecCCC-C--------------HHHHHHhc----------------CCCCC-HHHH
Confidence            11                      111000 0              00000000                00000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |.                        +..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++...
T Consensus       103 ~~------------------------~~~~---i~~~l~~LH--~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~~~  150 (288)
T cd07833         103 RS------------------------YIWQ---LLQAIAYCH--SHNIIHRDIKPENILVS---ESGVLKLCDFGFARAL  150 (288)
T ss_pred             HH------------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHeEEC---CCCCEEEEeeeccccc
Confidence            10                        2223   667777888  99999999999999995   4567999999998765


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....       ......+|++.|+|||++..     ...++.++|+||+||++|+|++|.+||.+....+..+......
T Consensus       151 ~~~~~-------~~~~~~~~~~~~~~PE~~~~-----~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  218 (288)
T cd07833         151 RARPA-------SPLTDYVATRWYRAPELLVG-----DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCL  218 (288)
T ss_pred             CCCcc-------ccccCcccccCCcCCchhcC-----CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            43221       01235678999999999863     2368889999999999999999999998653221100000000


Q ss_pred             hhhHHHHHHHHh--cCC---CCCCCC--------CC-CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQ--QGH---YDFPEG--------EW-STISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~--~~~---~~~p~~--------~~-~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..... ......  ...   ..++..        .+ ..++.++++||++||..||++||+++++++||||
T Consensus       219 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         219 GPLPP-SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCCH-HHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            00000 000000  000   011100        01 1348999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.98  E-value=5.5e-32  Score=266.32  Aligned_cols=250  Identities=26%  Similarity=0.391  Sum_probs=171.9

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      |++ .+.||+|+||.||++.+..++..||+|.++... ......+.+|+.++..+ +||||+++++++++....+   .+
T Consensus         2 y~~-~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv   76 (255)
T cd08219           2 YNV-LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLY---IV   76 (255)
T ss_pred             ceE-EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEE---EE
Confidence            444 468999999999999999999999999986432 22345677899999886 5999999999987665433   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-                 + +              .+...+..        ..      ....       
T Consensus        77 ------~e~~~-----------------~-~--------------~l~~~~~~--------~~------~~~~-------   97 (255)
T cd08219          77 ------MEYCD-----------------G-G--------------DLMQKIKL--------QR------GKLF-------   97 (255)
T ss_pred             ------EeeCC-----------------C-C--------------cHHHHHHh--------cc------CCCC-------
Confidence                  11100                 0 0              00000000        00      0000       


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +...+                  ..|..+   ++.++.++|  ++||+|+||||+|||+.   ..+.++|+|||++....
T Consensus        98 ~~~~~------------------~~~~~~---i~~al~~lH--~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~~  151 (255)
T cd08219          98 PEDTI------------------LQWFVQ---MCLGVQHIH--EKRVLHRDIKSKNIFLT---QNGKVKLGDFGSARLLT  151 (255)
T ss_pred             CHHHH------------------HHHHHH---HHHHHHHHh--hCCcccCCCCcceEEEC---CCCcEEEcccCcceeec
Confidence            00000                  013334   667778888  99999999999999994   34569999999986543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        ......|++.|+|||++.+      ..++.++|+||+||++|+|++|.+||.+.+             
T Consensus       152 ~~~~--------~~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-------------  204 (255)
T cd08219         152 SPGA--------YACTYVGTPYYVPPEIWEN------MPYNNKSDIWSLGCILYELCTLKHPFQANS-------------  204 (255)
T ss_pred             cccc--------ccccccCCccccCHHHHcc------CCcCchhhhhhhchhheehhhccCCCCCCC-------------
Confidence            2211        1234679999999999863      458889999999999999999999997643             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                        .......+..+.+....   ..++.++++||.+||.+||++||++.+++.-
T Consensus       205 --~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         205 --WKNLILKVCQGSYKPLP---SHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             --HHHHHHHHhcCCCCCCC---cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence              12234455555443222   3578899999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.98  E-value=2.6e-32  Score=271.68  Aligned_cols=259  Identities=33%  Similarity=0.527  Sum_probs=179.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |.+ .+.||+|+||.||+|....++..||+|++.+..   ......+.+|++++.++.+||||+++++++.+....+   
T Consensus         3 y~~-~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~---   78 (280)
T cd05581           3 FKF-GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLY---   78 (280)
T ss_pred             ceE-eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEE---
Confidence            444 467999999999999999999999999986532   1223567789999988755999999999887654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .+      +|.+-                 + +              .+...+.........                 +
T Consensus        79 lv------~e~~~-----------------~-~--------------~L~~~l~~~~~l~~~-----------------~  103 (280)
T cd05581          79 FV------LEYAP-----------------N-G--------------ELLQYIRKYGSLDEK-----------------C  103 (280)
T ss_pred             EE------EcCCC-----------------C-C--------------cHHHHHHHcCCCCHH-----------------H
Confidence            11      11100                 0 0              000000000000000                 0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      +                        ..+..+   ++.++.++|  ++|++|+||||+||++.   ..+.++|+|||++..
T Consensus       104 ~------------------------~~i~~q---l~~~l~~Lh--~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~  151 (280)
T cd05581         104 T------------------------RFYAAE---ILLALEYLH--SKGIIHRDLKPENILLD---KDMHIKITDFGTAKV  151 (280)
T ss_pred             H------------------------HHHHHH---HHHHHHHHH--HCCeeecCCCHHHeEEC---CCCCEEecCCccccc
Confidence            0                        013344   677788888  99999999999999994   345699999999875


Q ss_pred             cccCCCCCC------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        286 IKFNTSVHS------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  353 (539)
Q Consensus       286 ~~~~~~~~~------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~  353 (539)
                      .........            ...........|+..|+|||++..      ..++.++|+|||||++|+|++|.+||...
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~  225 (280)
T cd05581         152 LDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE------KPAGKSSDLWALGCIIYQMLTGKPPFRGS  225 (280)
T ss_pred             cCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC------CCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence            432211000            000112345678999999999863      34778999999999999999999999765


Q ss_pred             CCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH----HHHhcCCCc
Q psy16343        354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA----ASVLKHPWI  423 (539)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta----~e~l~Hpw~  423 (539)
                      +               ....+..+....+.+|.    .+++++.+||.+||..||++||++    +++|+||||
T Consensus       226 ~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         226 N---------------EYLTFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             c---------------HHHHHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            3               12344555566666664    568999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.98  E-value=9.9e-33  Score=275.28  Aligned_cols=253  Identities=26%  Similarity=0.334  Sum_probs=173.1

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|.. .+.||+|+||.||+|.+..++..||+|+++... ......+.+|++++..+ +||||+++++++.++...+   .
T Consensus         5 ~y~~-~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   79 (277)
T cd06642           5 LFTK-LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLW---I   79 (277)
T ss_pred             HHHH-HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceE---E
Confidence            3443 356999999999999999999999999986433 22345678899999986 6999999999887654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .+|  ..+.             .+...+..                 .... ...+
T Consensus        80 v-----------------------~e~--~~~~-------------~L~~~~~~-----------------~~~~-~~~~  103 (277)
T cd06642          80 I-----------------------MEY--LGGG-------------SALDLLKP-----------------GPLE-ETYI  103 (277)
T ss_pred             E-----------------------EEc--cCCC-------------cHHHHhhc-----------------CCCC-HHHH
Confidence            1                       111  0000             00000000                 0000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +       .                 +..+   ++.++.|+|  ++||+|+||||+||++..   .+.+||+|||++..+
T Consensus       104 ~-------~-----------------~~~~---i~~~l~~lH--~~~ivH~dl~p~ni~i~~---~~~~~l~dfg~~~~~  151 (277)
T cd06642         104 A-------T-----------------ILRE---ILKGLDYLH--SERKIHRDIKAANVLLSE---QGDVKLADFGVAGQL  151 (277)
T ss_pred             H-------H-----------------HHHH---HHHHHHHHh--cCCeeccCCChheEEEeC---CCCEEEccccccccc
Confidence            0       0                 2223   667788888  999999999999999953   456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        ......|+..|+|||++.+      ..++.++|+||+||++|+|++|.+||......          
T Consensus       152 ~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----------  207 (277)
T cd06642         152 TDTQI--------KRNTFVGTPFWMAPEVIKQ------SAYDFKADIWSLGITAIELAKGEPPNSDLHPM----------  207 (277)
T ss_pred             cCcch--------hhhcccCcccccCHHHhCc------CCCchhhhHHHHHHHHHHHHhCCCCCcccchh----------
Confidence            32211        1124578999999999863      45788999999999999999999999754321          


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           .....+..+. ..++    ..++.++.+||.+||..||++||++.++++||||...
T Consensus       208 -----~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         208 -----RVLFLIPKNSPPTLE----GQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             -----hHHhhhhcCCCCCCC----cccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence                 1222222221 1121    2468899999999999999999999999999999653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.98  E-value=4e-32  Score=273.79  Aligned_cols=261  Identities=24%  Similarity=0.324  Sum_probs=174.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|.+ .+.||+|+||.||+|.+..++..||||++.+... .....+.+|+.++.+..+||||+++++++.++...+   .
T Consensus        16 ~~~~-~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~---~   91 (296)
T cd06618          16 DLEN-LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF---I   91 (296)
T ss_pred             hhee-eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE---E
Confidence            3444 4689999999999999998999999999965432 233456778887877777999999999987654433   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +      .|                 +.-+ ...            .+.....  ..++..                   
T Consensus        92 v------~e-----------------~~~~-~l~------------~l~~~~~--~~l~~~-------------------  114 (296)
T cd06618          92 C------ME-----------------LMST-CLD------------KLLKRIQ--GPIPED-------------------  114 (296)
T ss_pred             E------ee-----------------ccCc-CHH------------HHHHHhc--CCCCHH-------------------
Confidence            1      11                 1000 000            0000000  000000                   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                       ...                     .+..+   ++.++.|+|  + +||+||||||+||++.   ..+.+||+|||++..
T Consensus       115 -~~~---------------------~i~~~---i~~~l~~lH--~~~~i~H~dl~p~nill~---~~~~~kL~dfg~~~~  164 (296)
T cd06618         115 -ILG---------------------KMTVA---IVKALHYLK--EKHGVIHRDVKPSNILLD---ASGNVKLCDFGISGR  164 (296)
T ss_pred             -HHH---------------------HHHHH---HHHHHHHHH--hhCCEecCCCcHHHEEEc---CCCCEEECccccchh
Confidence             000                     02223   667788888  6 5999999999999994   445799999999865


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +.....         .....|++.|+|||.+.+..  ....++.++|+||+||++|+|++|+.||.....          
T Consensus       165 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~--~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------  223 (296)
T cd06618         165 LVDSKA---------KTRSAGCAAYMAPERIDPPD--PNPKYDIRADVWSLGISLVELATGQFPYKNCKT----------  223 (296)
T ss_pred             ccCCCc---------ccCCCCCccccCHhhcCCCC--CccccccchhHHHHHHHHHHHHhCCCCCCcchh----------
Confidence            432111         12346889999999986311  023578899999999999999999999965311          


Q ss_pred             chhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                          .......+... ...++.  ...++.++++||.+||..||++||+++++++||||...
T Consensus       224 ----~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         224 ----EFEVLTKILQEEPPSLPP--NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             ----HHHHHHHHhcCCCCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence                11122233322 222322  12478999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.98  E-value=1.4e-32  Score=271.71  Aligned_cols=253  Identities=26%  Similarity=0.378  Sum_probs=174.1

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      +.||+|+||.||+|.+..+++.||+|.+.+... ....++.+|+++++.+. ||||+++++++......+   .      
T Consensus         7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~---l------   76 (265)
T cd06605           7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDIS---I------   76 (265)
T ss_pred             HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEE---E------
Confidence            569999999999999999999999999865432 23456889999999875 999999998886653322   1      


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                       +.+|.-+ .              .+...+... .... |                ..++    
T Consensus        77 -----------------v~e~~~~-~--------------~L~~~~~~~~~~~~-~----------------~~~~----  103 (265)
T cd06605          77 -----------------CMEYMDG-G--------------SLDKILKEVQGRIP-E----------------RILG----  103 (265)
T ss_pred             -----------------EEEecCC-C--------------cHHHHHHHccCCCC-H----------------HHHH----
Confidence                             1111000 0              000000000 0000 0                0000    


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          .+..+   ++.++.|+|  + .||+||||||+||++..   .+.+||+|||++.......
T Consensus       104 --------------------~~~~~---l~~~l~~lH--~~~~i~H~dl~~~ni~~~~---~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605         104 --------------------KIAVA---VLKGLTYLH--EKHKIIHRDVKPSNILVNS---RGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             --------------------HHHHH---HHHHHHHHc--CCCCeecCCCCHHHEEECC---CCCEEEeecccchhhHHHH
Confidence                                02333   667788888  8 99999999999999954   4569999999986543211


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                                .....|++.|+|||++.+      ..++.++|+||+||++|+|++|..||.......          ...
T Consensus       156 ----------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----------~~~  209 (265)
T cd06605         156 ----------AKTFVGTSSYMAPERIQG------NDYSVKSDIWSLGLSLIELATGRFPYPPENDPP----------DGI  209 (265)
T ss_pred             ----------hhcccCChhccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCcccccc----------ccH
Confidence                      112678999999999863      468899999999999999999999997542110          001


Q ss_pred             HHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        371 EILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       371 ~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ....+.+..+ .+.++.   ..++.++++||.+||..||++|||+.|++.||||+..
T Consensus       210 ~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         210 FELLQYIVNEPPPRLPS---GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHHHHhcCCCCCCCh---hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            1223333332 223332   2278999999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.98  E-value=9.4e-32  Score=265.54  Aligned_cols=260  Identities=27%  Similarity=0.410  Sum_probs=175.4

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |.+ .+.||+|+||.||+|.+..++..||+|++......  ....+.+|++++..+ +|+||+++++++.+....+    
T Consensus         2 y~~-~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~----   75 (264)
T cd06626           2 WQR-GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVY----   75 (264)
T ss_pred             cee-eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEE----
Confidence            443 46899999999999999989999999999654332  356788999999987 6999999998776543222    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      +.+|  ..+.             .+...+........+                 .+
T Consensus        76 l----------------------v~e~--~~~~-------------~L~~~~~~~~~~~~~-----------------~~  101 (264)
T cd06626          76 I----------------------FMEY--CSGG-------------TLEELLEHGRILDEH-----------------VI  101 (264)
T ss_pred             E----------------------EEec--CCCC-------------cHHHHHhhcCCCChH-----------------HH
Confidence            0                      1111  0000             000000000000000                 00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +                        .+..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++...
T Consensus       102 ~------------------------~i~~~---i~~~l~~lh--~~~i~H~dl~~~nil~~~---~~~~kl~d~g~~~~~  149 (264)
T cd06626         102 R------------------------VYTLQ---LLEGLAYLH--SHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKL  149 (264)
T ss_pred             H------------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEECC---CCCEEEccccccccc
Confidence            0                        02333   667778887  999999999999999954   456999999998765


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .......    .......+|++.|+|||++...   ....++.++|+||+||++|+|++|+.||.+...           
T Consensus       150 ~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~---~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-----------  211 (264)
T cd06626         150 KNNTTTM----GEEVQSLAGTPAYMAPEVITGG---KGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-----------  211 (264)
T ss_pred             CCCCCcc----cccccCCcCCcCccChhhccCC---CCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-----------
Confidence            4322110    0112246789999999998641   112478899999999999999999999975421           


Q ss_pred             hhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        367 HACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       367 ~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                         .......+..+ .+.+|.  +..++..+++||.+||+.||.+|||++|++.|||+
T Consensus       212 ---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         212 ---EFQIMFHVGAGHKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             ---hHHHHHHHhcCCCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence               11122223322 233433  34569999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0665|consensus

Probab=99.98  E-value=4e-33  Score=267.28  Aligned_cols=268  Identities=25%  Similarity=0.385  Sum_probs=179.3

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ...+|.|+- .|..+.+..+++.||+|.+...  ......+..+|..++..+ .|+|||+++.+|.-......       
T Consensus        22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~-------   92 (369)
T KOG0665|consen   22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEE-------   92 (369)
T ss_pred             ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHH-------
Confidence            356788887 6777888889999999987432  223345678999988876 59999999998854332110       


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .                -|+++...                        ||.--+...        .-...|-=-+.
T Consensus        93 ---~----------------~e~y~v~e------------------------~m~~nl~~v--------i~~elDH~tis  121 (369)
T KOG0665|consen   93 ---F----------------QEVYLVME------------------------LMDANLCQV--------ILMELDHETIS  121 (369)
T ss_pred             ---H----------------HhHHHHHH------------------------hhhhHHHHH--------HHHhcchHHHH
Confidence               0                01111100                        000000000        00111222233


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      -++|+++                        +++.++|  +.||+||||||+||++.   ....+||+|||+|+..... 
T Consensus       122 ~i~yq~~------------------------~~ik~lh--s~~IihRdLkPsnivv~---~~~~lKi~dfg~ar~e~~~-  171 (369)
T KOG0665|consen  122 YILYQML------------------------CGIKHLH--SAGIIHRDLKPSNIVVN---SDCTLKILDFGLARTEDTD-  171 (369)
T ss_pred             HHHHHHH------------------------HHHHHHH--hcceeecccCcccceec---chhheeeccchhhcccCcc-
Confidence            4555554                        4456666  99999999999999994   4456899999999753221 


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              -.++.++.|+.|.|||++.+      .+|...+||||+|||+.+|+.|..-|.|.+..|++....+..+++.
T Consensus       172 --------~~mtpyVvtRyyrapevil~------~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd  237 (369)
T KOG0665|consen  172 --------FMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPD  237 (369)
T ss_pred             --------cccCchhheeeccCchheec------cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCC
Confidence                    13456799999999999974      4589999999999999999999999999987776555444433332


Q ss_pred             HHHHHHHhc---------CC---C----CCCCCCCC-------CCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        371 EILFHSIQQ---------GH---Y----DFPEGEWS-------TISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       371 ~~~~~~i~~---------~~---~----~~p~~~~~-------~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      ...+.+...         .+   +    .||...|.       .-+..|+||+.+||..||++|++++++|+|||++
T Consensus       238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            222222110         00   1    23433332       2346899999999999999999999999999996

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.98  E-value=5.9e-32  Score=272.41  Aligned_cols=251  Identities=27%  Similarity=0.398  Sum_probs=174.3

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK  133 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK  133 (539)
                      ..||+|+||.||++....++..||||.+..........+.+|+.++..+ +|+||+++++++..++..+   .       
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~---l-------   94 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW---V-------   94 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEE---E-------
Confidence            4699999999999999999999999998644333456688899999886 6999999999987654332   1       


Q ss_pred             CCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHH
Q psy16343        134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       134 ~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil  213 (539)
                                      +.+|  ..+.             .+...+.. ..+..+..                        
T Consensus        95 ----------------v~e~--~~~~-------------~L~~~~~~-~~~~~~~~------------------------  118 (292)
T cd06657          95 ----------------VMEF--LEGG-------------ALTDIVTH-TRMNEEQI------------------------  118 (292)
T ss_pred             ----------------EEec--CCCC-------------cHHHHHhc-CCCCHHHH------------------------
Confidence                            1111  0000             00000000 00000000                        


Q ss_pred             HHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC
Q psy16343        214 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH  293 (539)
Q Consensus       214 ~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~  293 (539)
                                       ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++........  
T Consensus       119 -----------------~~~~~q---l~~~l~~lH--~~givH~dl~p~Nilv~---~~~~~~l~dfg~~~~~~~~~~--  171 (292)
T cd06657         119 -----------------AAVCLA---VLKALSVLH--AQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVP--  171 (292)
T ss_pred             -----------------HHHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCCEEEcccccceecccccc--
Confidence                             003334   667788888  89999999999999994   345699999998765432111  


Q ss_pred             CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHH
Q psy16343        294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL  373 (539)
Q Consensus       294 ~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~  373 (539)
                            .....+||+.|+|||++..      ..++.++|+||+||++|+|++|.+||.+...               ...
T Consensus       172 ------~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---------------~~~  224 (292)
T cd06657         172 ------RRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---------------LKA  224 (292)
T ss_pred             ------cccccccCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------------HHH
Confidence                  1124578999999998853      3577899999999999999999999976431               112


Q ss_pred             HHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        374 FHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       374 ~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ...+..+.. .++  ....++.++.+||.+||..||.+||++.+++.||||....
T Consensus       225 ~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         225 MKMIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             HHHHHhhCCcccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence            233332211 111  1245789999999999999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.98  E-value=6.9e-32  Score=266.06  Aligned_cols=256  Identities=27%  Similarity=0.387  Sum_probs=172.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||.|+||.||+|.+..++..||+|++.....  ....++..|+++++.+ +||||+++++++.......   .    
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---~----   76 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQT---L----   76 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCE---E----
Confidence            3679999999999999999999999999864322  2345677899999987 5999999998775422110   0    


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                            .+           +.++  ..+.             .+...+..        ..  .  .....+ ...+|   
T Consensus        77 ------~~-----------~~e~--~~~~-------------~L~~~l~~--------~~--~--~~~~l~-~~~~~---  108 (265)
T cd08217          77 ------YI-----------VMEY--CEGG-------------DLAQLIQK--------CK--K--ERKYIE-EEFIW---  108 (265)
T ss_pred             ------EE-----------Eehh--ccCC-------------CHHHHHHH--------Hh--h--cccCCC-HHHHH---
Confidence                  00           0111  0000             00000000        00  0  000000 00000   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhh---hhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI---QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h---~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                           .+..+   ++.++.++|..   +++|+||||||+||++.   ..+.+||+|||++....
T Consensus       109 ---------------------~~~~~---i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g~~~~~~  161 (265)
T cd08217         109 ---------------------RILTQ---LLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFGLAKILG  161 (265)
T ss_pred             ---------------------HHHHH---HHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEeccccccccc
Confidence                                 02223   55666666633   78899999999999995   34679999999987654


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....        ...+..|++.|+|||++..      ..++.++|+|||||++|+|++|..||.+.+             
T Consensus       162 ~~~~--------~~~~~~~~~~~~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-------------  214 (265)
T cd08217         162 HDSS--------FAKTYVGTPYYMSPEQLNH------MSYDEKSDIWSLGCLIYELCALSPPFTARN-------------  214 (265)
T ss_pred             CCcc--------cccccccCCCccChhhhcC------CCCCchhHHHHHHHHHHHHHHCCCcccCcC-------------
Confidence            3221        1235679999999999863      347889999999999999999999997653             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                        ...+...+..+.+....   ..++.++.+||.+||..||++||+++++++|||+
T Consensus       215 --~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         215 --QLQLASKIKEGKFRRIP---YRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             --HHHHHHHHhcCCCCCCc---cccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence              23355566655442211   3578999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG1151|consensus

Probab=99.98  E-value=3.3e-33  Score=276.67  Aligned_cols=270  Identities=26%  Similarity=0.377  Sum_probs=190.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEec--cC-----CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIID--KL-----PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~--k~-----~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      ..+||+|+|+.||+|.+....+.||||+-.  |.     .....+...+|..|.+.+ +||.||+++|||.-+....+  
T Consensus       468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslDtdsFC--  544 (775)
T KOG1151|consen  468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLDTDSFC--  544 (775)
T ss_pred             HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeeeeccccce--
Confidence            468999999999999999999999999852  21     112234567888888775 79999999999965433221  


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      -|      .|.+-    ++.     .||-+-                       .        .+...+.++..      
T Consensus       545 TV------LEYce----GND-----LDFYLK-----------------------Q--------hklmSEKEARS------  572 (775)
T KOG1151|consen  545 TV------LEYCE----GND-----LDFYLK-----------------------Q--------HKLMSEKEARS------  572 (775)
T ss_pred             ee------eeecC----CCc-----hhHHHH-----------------------h--------hhhhhHHHHHH------
Confidence            11      11111    000     011110                       0        00011112211      


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                                 ++.|   ++.|+.|+.-.+--|||-||||.|||+.+....|.|||.||||++.
T Consensus       573 ---------------------------IiMQ---iVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI  622 (775)
T KOG1151|consen  573 ---------------------------IIMQ---IVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI  622 (775)
T ss_pred             ---------------------------HHHH---HHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence                                       3444   7888999986667799999999999998877889999999999986


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +... +.....+..+.....||-||++||.+.  .+.+-...+.++|+||+|||+|..|.|+-||..+-.          
T Consensus       623 Mddd-Sy~~vdGmeLTSQgAGTYWYLPPEcFv--VgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs----------  689 (775)
T KOG1151|consen  623 MDDD-SYNSVDGMELTSQGAGTYWYLPPECFV--VGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS----------  689 (775)
T ss_pred             ccCC-ccCcccceeeecccCceeeecCcceee--cCCCCCccccceeeEeeehhhhhhhccCCCCCCchh----------
Confidence            5432 333334444566789999999999775  243445678999999999999999999999965321          


Q ss_pred             chhhHHHHH-H-HHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        366 CHACQEILF-H-SIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       366 ~~~~~~~~~-~-~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                         .+..+- . .+...+..||..  +-+|.+|++||++||.+--+.|+.+.|+..||||..
T Consensus       690 ---QQdILqeNTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  690 ---QQDILQENTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             ---HHHHHhhhchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence               112121 1 233456788875  469999999999999999999999999999999964

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.98  E-value=8.1e-32  Score=264.91  Aligned_cols=250  Identities=25%  Similarity=0.374  Sum_probs=170.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|....+|..||+|.+....  ......+.+|+++++.+ +|+||+++++.+.+....+   .|   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~---lv---   77 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLF---IV---   77 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEE---EE---
Confidence            467999999999999999999999999986431  22345677899999987 5999999999886654322   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC-CCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                          .+|  ..+.             .+...+. .....-+|..                    
T Consensus        78 --------------------~e~--~~~~-------------~L~~~~~~~~~~~~~~~~--------------------  102 (257)
T cd08225          78 --------------------MEY--CDGG-------------DLMKRINRQRGVLFSEDQ--------------------  102 (257)
T ss_pred             --------------------Eec--CCCC-------------cHHHHHHhccCCCCCHHH--------------------
Confidence                                111  0000             0000000 0000000000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                          ...|..+   ++.++.|+|  ++||+||||||+||++..++  ..+||+|||++......
T Consensus       103 --------------------~~~~~~~---l~~~l~~lh--~~~i~H~dl~~~nil~~~~~--~~~~l~d~~~~~~~~~~  155 (257)
T cd08225         103 --------------------ILSWFVQ---ISLGLKHIH--DRKILHRDIKSQNIFLSKNG--MVAKLGDFGIARQLNDS  155 (257)
T ss_pred             --------------------HHHHHHH---HHHHHHHHH--HCCcccccCCHHHEEEcCCC--CeEEecccccchhccCC
Confidence                                0012333   667788888  99999999999999995432  24699999998754322


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..        ......|++.|+|||++..      ..++.++|+||+||++|+|++|..||.+.+.              
T Consensus       156 ~~--------~~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------------  207 (257)
T cd08225         156 ME--------LAYTCVGTPYYLSPEICQN------RPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--------------  207 (257)
T ss_pred             cc--------cccccCCCccccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------------
Confidence            11        1224568999999999853      3578899999999999999999999975431              


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                       ......+..+.....   -..++.+++++|.+||..||++|||++|+++||||
T Consensus       208 -~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         208 -HQLVLKICQGYFAPI---SPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             -HHHHHHHhcccCCCC---CCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence             112223333322111   13578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=6e-32  Score=270.77  Aligned_cols=264  Identities=24%  Similarity=0.325  Sum_probs=173.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|++ .+.||+|+||.||++.+..++..||+|++.... ......+.+|++++..+ +||||+++++++.+....+   .
T Consensus         6 ~~~~-~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   80 (284)
T cd06620           6 DLET-ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNIC---M   80 (284)
T ss_pred             HHHH-HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEE---E
Confidence            3444 367999999999999999999999999885432 22346788999999987 5999999999987654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .+|  ..+                    ++....    +..     ..... ..-+
T Consensus        81 v-----------------------~e~--~~~--------------------~~L~~~----~~~-----~~~~~-~~~~  105 (284)
T cd06620          81 C-----------------------MEF--MDC--------------------GSLDRI----YKK-----GGPIP-VEIL  105 (284)
T ss_pred             E-----------------------Eec--CCC--------------------CCHHHH----HHh-----ccCCC-HHHH
Confidence            1                       111  000                    000000    000     00000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      +   .                     +..+   ++.++.|+|  + .||+||||||+||++.   ..+.++|+|||++..
T Consensus       106 ~---~---------------------~~~~---i~~~l~~LH--~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl~~~  153 (284)
T cd06620         106 G---K---------------------IAVA---VVEGLTYLY--NVHRIMHRDIKPSNILVN---SRGQIKLCDFGVSGE  153 (284)
T ss_pred             H---H---------------------HHHH---HHHHHHHHH--HhcCeeccCCCHHHEEEC---CCCcEEEccCCcccc
Confidence            0   0                     1222   556677777  5 5899999999999994   445699999999764


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .....          ....+||..|+|||++..      ..++.++|+||+||++|+|++|..||......+....   .
T Consensus       154 ~~~~~----------~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~---~  214 (284)
T cd06620         154 LINSI----------ADTFVGTSTYMSPERIQG------GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQD---D  214 (284)
T ss_pred             hhhhc----------cCccccCcccCCHHHHcc------CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhh---h
Confidence            32111          124689999999999853      3678899999999999999999999986542110000   0


Q ss_pred             chhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                       ..........+... ...++.   ..++.++.+||.+||.+||++|||++|+++||||...
T Consensus       215 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         215 -PMGILDLLQQIVQEPPPRLPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             -hhHHHHHHHHHhhccCCCCCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence             00001122333322 222222   2378899999999999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.98  E-value=1.4e-31  Score=264.09  Aligned_cols=254  Identities=27%  Similarity=0.390  Sum_probs=176.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||.||+|.+..+++.||||++..... .....+.+|+..+.++. ||||+++++++......+   .     
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~---l-----   76 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEIS---I-----   76 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEE---E-----
Confidence            4689999999999999999999999999865432 23567889999999975 999999999887653322   0     


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                        +.++.-+ +              .+...+.....+.++.                 +|    
T Consensus        77 ------------------v~e~~~~-~--------------~L~~~l~~~~~l~~~~-----------------~~----  102 (264)
T cd06623          77 ------------------VLEYMDG-G--------------SLADLLKKVGKIPEPV-----------------LA----  102 (264)
T ss_pred             ------------------EEEecCC-C--------------cHHHHHHHcCCCCHHH-----------------HH----
Confidence                              1111000 0              0000000000000000                 00    


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          .+..+   ++.++.|+|  + +||+||||||+||++.   ..+.++|+|||++.......
T Consensus       103 --------------------~~~~~---l~~~l~~lh--~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623         103 --------------------YIARQ---ILKGLDYLH--TKRHIIHRDIKPSNLLIN---SKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             --------------------HHHHH---HHHHHHHHh--ccCCCccCCCCHHHEEEC---CCCCEEEccCccceecccCC
Confidence                                02333   667788888  9 9999999999999994   44669999999987553322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ...+..|+..|+|||++..      ..++.++|+|||||++|+|++|.+||......+            .
T Consensus       155 ~--------~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~------------~  208 (264)
T cd06623         155 D--------QCNTFVGTVTYMSPERIQG------ESYSYAADIWSLGLTLLECALGKFPFLPPGQPS------------F  208 (264)
T ss_pred             C--------cccceeecccccCHhhhCC------CCCCchhhHHHHHHHHHHHHhCCCCCccccccC------------H
Confidence            1        1124578999999999863      467889999999999999999999997653211            1


Q ss_pred             HHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        371 EILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       371 ~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ..+...+... ...++.   ..++..+.+||++||..+|++||++.|+++||||...
T Consensus       209 ~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         209 FELMQAICDGPPPSLPA---EEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             HHHHHHHhcCCCCCCCc---ccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            2233444332 222222   1278999999999999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.98  E-value=9.4e-32  Score=273.59  Aligned_cols=251  Identities=24%  Similarity=0.360  Sum_probs=172.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|++..++..||+|++......   ....+.+|++++..+ +||||+++++++.+....+   .|  
T Consensus        26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv--   99 (313)
T cd06633          26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAW---LV--   99 (313)
T ss_pred             ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE---EE--
Confidence            35699999999999999999999999998643221   224577899999987 5999999999987754332   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                           .+|-.+..                ...           +..    ...... ...++  
T Consensus       100 ---------------------~e~~~~~l----------------~~~-----------l~~----~~~~l~-~~~~~--  124 (313)
T cd06633         100 ---------------------MEYCLGSA----------------SDL-----------LEV----HKKPLQ-EVEIA--  124 (313)
T ss_pred             ---------------------EecCCCCH----------------HHH-----------HHh----cCCCCC-HHHHH--
Confidence                                 11100000                000           000    000000 00000  


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                            .+..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++....  
T Consensus       125 ----------------------~~~~q---i~~al~~LH--~~gi~H~dl~p~nili~~---~~~~kL~dfg~~~~~~--  172 (313)
T cd06633         125 ----------------------AITHG---ALQGLAYLH--SHNMIHRDIKAGNILLTE---PGQVKLADFGSASKSS--  172 (313)
T ss_pred             ----------------------HHHHH---HHHHHHHHH--HCCeecCCCChhhEEECC---CCCEEEeecCCCcccC--
Confidence                                  02233   667788888  999999999999999953   4569999999875321  


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                                ...+..|+..|+|||++....   ...++.++|+||+||++|+|++|.+||.+.+.              
T Consensus       173 ----------~~~~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--------------  225 (313)
T cd06633         173 ----------PANSFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------------  225 (313)
T ss_pred             ----------CCCCccccccccChhhccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--------------
Confidence                      112567999999999985311   23578899999999999999999999976532              


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ...+...........+   ...++..+++||.+||.+||.+||+++++++||||...
T Consensus       226 ~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         226 MSALYHIAQNDSPTLQ---SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             HHHHHHHHhcCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            1122222222222222   23567889999999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.98  E-value=7.8e-32  Score=276.08  Aligned_cols=273  Identities=26%  Similarity=0.335  Sum_probs=174.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|.+ .+.||+|+||.||+|.+..++..||||.+.+..  ......+.+|++++..+ +||||++++++|.......
T Consensus         8 ~~~~y~~-~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           8 ITNRYVD-LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDI   85 (328)
T ss_pred             cccceEE-EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcE
Confidence            4455665 478999999999999999999999999885422  22345677899999987 5999999999885432111


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +          +           +.+|- + +              .+...+.... ..++..             
T Consensus        86 ----~----------l-----------v~e~~-~-~--------------~L~~~~~~~~-~~~~~~-------------  110 (328)
T cd07856          86 ----Y----------F-----------VTELL-G-T--------------DLHRLLTSRP-LEKQFI-------------  110 (328)
T ss_pred             ----E----------E-----------Eeehh-c-c--------------CHHHHHhcCC-CCHHHH-------------
Confidence                0          0           11110 0 0              0000000000 000000             


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                          +                        .+..+   ++.++.|+|  ++||+||||||.|||+.   ..+.+||+|||+
T Consensus       111 ----~------------------------~~~~q---l~~aL~~LH--~~~iiH~dl~p~Nili~---~~~~~~l~dfg~  154 (328)
T cd07856         111 ----Q------------------------YFLYQ---ILRGLKYVH--SAGVVHRDLKPSNILIN---ENCDLKICDFGL  154 (328)
T ss_pred             ----H------------------------HHHHH---HHHHHHHHH--hCCcccCCCCHHHEeEC---CCCCEEeCcccc
Confidence                0                        02233   667788888  99999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +.....           ...+.++++.|+|||++..     ...|+.++|+||+||++|+|++|.+||.+..........
T Consensus       155 ~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~  218 (328)
T cd07856         155 ARIQDP-----------QMTGYVSTRYYRAPEIMLT-----WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSII  218 (328)
T ss_pred             ccccCC-----------CcCCCcccccccCceeeec-----cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            864321           1234578999999998752     246889999999999999999999999765321000000


Q ss_pred             CccchhhHHHHH------------HHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILF------------HSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~------------~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .+......+...            ....... ..|. .....+++++++||++||+.||++|||+++++.||||....
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~  295 (328)
T cd07856         219 TDLLGTPPDDVINTICSENTLRFVQSLPKRE-PVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH  295 (328)
T ss_pred             HHHhCCCCHHHHHhccchhhHHHHhhccccC-CCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence            000000000011            1110000 1111 11235789999999999999999999999999999997543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.98  E-value=4.8e-32  Score=270.44  Aligned_cols=250  Identities=26%  Similarity=0.356  Sum_probs=172.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||.|+||.||+|.+..++..||+|++..... .....+.+|+++++++ +||||+++++++.++...+   .|    
T Consensus         9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv----   80 (277)
T cd06640           9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLW---II----   80 (277)
T ss_pred             hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEE---EE----
Confidence            3569999999999999999999999999864322 2345677899999987 6999999999987654322   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                         .++  ..+.             .+...+..                 ...    +...+..
T Consensus        81 -------------------~e~--~~~~-------------~L~~~i~~-----------------~~l----~~~~~~~  105 (277)
T cd06640          81 -------------------MEY--LGGG-------------SALDLLRA-----------------GPF----DEFQIAT  105 (277)
T ss_pred             -------------------Eec--CCCC-------------cHHHHHhc-----------------CCC----CHHHHHH
Confidence                               111  0000             00000000                 000    0000001


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                           +..+   ++.++.|+|  ++||+|+||||+||++..   .+.++|+|||++........
T Consensus       106 ---------------------~~~~---l~~~l~~lh--~~~ivH~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640         106 ---------------------MLKE---ILKGLDYLH--SEKKIHRDIKAANVLLSE---QGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             ---------------------HHHH---HHHHHHHHH--hCCccCcCCChhhEEEcC---CCCEEEcccccceeccCCcc
Confidence                                 2223   566778888  999999999999999953   45699999999875432211


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              ......||..|+|||++.+      ..++.++|+||+||++|+|++|.+||.+.+..               
T Consensus       157 --------~~~~~~~~~~y~apE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---------------  207 (277)
T cd06640         157 --------KRNTFVGTPFWMAPEVIQQ------SAYDSKADIWSLGITAIELAKGEPPNSDMHPM---------------  207 (277)
T ss_pred             --------ccccccCcccccCHhHhcc------CCCccHHHHHHHHHHHHHHHHCCCCCCCcChH---------------
Confidence                    1123568999999999863      35788999999999999999999999764321               


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .....+..+.   +......++.++.+||.+||..||++||+++++++||||...
T Consensus       208 ~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         208 RVLFLIPKNN---PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             hHhhhhhcCC---CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence            1222222221   111223578899999999999999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=6.5e-32  Score=269.39  Aligned_cols=263  Identities=21%  Similarity=0.282  Sum_probs=169.8

Q ss_pred             hcccCceeceeCceEEEEEEEcc-----CCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~-----t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      |.+ .+.||+|+||.||+|....     ++..||||++.+.... ....+.+|++++..+ +||||+++++++......+
T Consensus         7 ~~~-~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           7 IVL-KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             hhH-HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCCCeE
Confidence            444 3679999999999998753     4578999999654332 346788999999987 5999999999987653322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .+      .|.+-    +.    .+     ...+....               ........  ..    .....   
T Consensus        85 ---lv------~e~~~----~~----~L-----~~~i~~~~---------------~~~~~~~~--~~----~~~~~---  118 (280)
T cd05049          85 ---MV------FEYME----HG----DL-----NKFLRSHG---------------PDAAFLKS--PD----SPMGE---  118 (280)
T ss_pred             ---EE------EecCC----CC----CH-----HHHHHhcC---------------Cchhhhcc--cc----ccccc---
Confidence               11      11000    00    00     00000000               00000000  00    00000   


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                          .....+                  ..+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       119 ----l~~~~~------------------~~~~~~---i~~~l~~lH--~~~i~h~dlkp~nili~~---~~~~kl~d~g~  168 (280)
T cd05049         119 ----LTLSQL------------------LQIAVQ---IASGMVYLA--SQHFVHRDLATRNCLVGY---DLVVKIGDFGM  168 (280)
T ss_pred             ----ccHHHH------------------HHHHHH---HHHHHHHHh--hCCeeccccccceEEEcC---CCeEEECCccc
Confidence                000000                  002233   667778888  999999999999999953   46799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      +..........      ......+++.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+       
T Consensus       169 ~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-------  229 (280)
T cd05049         169 SRDVYTTDYYR------VGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-------  229 (280)
T ss_pred             ceecccCccee------cCCCCcccceecChhhhcc------CCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-------
Confidence            86432111100      0113356789999999863      468899999999999999998 999997653       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              .......+..+....+.   ..++.++++||.+||..||++||+++|+++
T Consensus       230 --------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         230 --------NEEVIECITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             --------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                    23355566666554433   357899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=7.1e-32  Score=269.26  Aligned_cols=254  Identities=25%  Similarity=0.345  Sum_probs=174.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|+. .+.||+|+||.||+|.+..++..||||++..... .....+.+|++++..+ +||||+++++++.++...+   
T Consensus         4 ~~~~~-~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~---   78 (277)
T cd06641           4 ELFTK-LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLW---   78 (277)
T ss_pred             Hhhhh-heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEE---
Confidence            34543 4679999999999999999999999999864322 2234677899999886 5999999999987654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .+|  ..+.             .+...+.. ..+..+.                 
T Consensus        79 lv-----------------------~e~--~~~~-------------~l~~~i~~-~~~~~~~-----------------  102 (277)
T cd06641          79 II-----------------------MEY--LGGG-------------SALDLLEP-GPLDETQ-----------------  102 (277)
T ss_pred             EE-----------------------EEe--CCCC-------------cHHHHHhc-CCCCHHH-----------------
Confidence            11                       111  0000             00000000 0000000                 


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                            ++                  .+..+   ++.++.++|  ++||+|+||||+||++.   ..+.++|+|||++..
T Consensus       103 ------~~------------------~~~~~---l~~~l~~lh--~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~~  150 (277)
T cd06641         103 ------IA------------------TILRE---ILKGLDYLH--SEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQ  150 (277)
T ss_pred             ------HH------------------HHHHH---HHHHHHHHc--cCCeecCCCCHHhEEEC---CCCCEEEeeccccee
Confidence                  00                  02223   666777777  99999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +.....        ......|+..|+|||.+..      ..++.++|+||+||++|+|++|.+||.....          
T Consensus       151 ~~~~~~--------~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----------  206 (277)
T cd06641         151 LTDTQI--------KRNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELAKGEPPHSELHP----------  206 (277)
T ss_pred             cccchh--------hhccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCccch----------
Confidence            432211        1124578999999999853      3567889999999999999999999965321          


Q ss_pred             chhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           ......+..+.. .++    ..++.++.++|.+||..||++||+++++++||||...
T Consensus       207 -----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         207 -----MKVLFLIPKNNPPTLE----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             -----HHHHHHHhcCCCCCCC----cccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence                 112233333322 222    2478899999999999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG2345|consensus

Probab=99.97  E-value=2.3e-33  Score=260.20  Aligned_cols=271  Identities=23%  Similarity=0.361  Sum_probs=176.3

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||+|||+.||++++..++..||+|.|.-......+..++|++..+++ +||||++++++.-.+....     
T Consensus        22 Ryri-~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~-----   94 (302)
T KOG2345|consen   22 RYRI-QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDG-----   94 (302)
T ss_pred             eEEE-eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccC-----
Confidence            4555 46799999999999999999999999999655555677889999999887 5999999998754332210     


Q ss_pred             eeecCCCC-CeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        128 AHRDLKPE-NILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       128 iHrDLK~e-nill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                           |-+ .|++            +|- ..+              .+...+..        ..  .  .+...+++   
T Consensus        95 -----~~~~yll~------------Pyy-~~G--------------sl~d~i~~--------~k--~--kg~~~sE~---  127 (302)
T KOG2345|consen   95 -----KHEAYLLL------------PYY-KRG--------------SLLDEIER--------LK--I--KGNFVSEA---  127 (302)
T ss_pred             -----ceeEEEEe------------ehh-ccc--------------cHHHHHHH--------Hh--h--cCCccCHH---
Confidence                 000 1111            110 000              00000000        00  0  00000100   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                          -+++                  |+.+   ++.++.++|  ...  .+||||||.|||+.+   .+.++|.|||-++
T Consensus       128 ----~iL~------------------if~g---ic~gL~~lH--~~~~~yAH~DiKP~NILls~---~~~~vl~D~GS~~  177 (302)
T KOG2345|consen  128 ----QILW------------------IFLG---ICRGLEALH--EKEPPYAHRDIKPANILLSD---SGLPVLMDLGSAT  177 (302)
T ss_pred             ----HHHH------------------HHHH---HHHHHHHHh--ccCCcccccCCCcceeEecC---CCceEEEeccCcc
Confidence                0111                  2222   667777777  888  999999999999965   3558999999877


Q ss_pred             ccccCCCCCC-CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHS-PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~-~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .......... ...-+.-..---|..|+|||.+....   ....+.++|||||||+||+|+.|..||...-.      .|
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~---~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------~G  248 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKS---HCTITERTDIWSLGCTLYAMMFGESPFERIYQ------QG  248 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheeccc---CcccccccchhhhhHHHHHHHHcCCcchHHhh------cC
Confidence            4332111000 00000011123488999999987422   23467899999999999999999999964311      11


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      .       .+.-.+.++.+.+|..  ..+|+....||+.||++||.+||++.+++.+
T Consensus       249 g-------SlaLAv~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  249 G-------SLALAVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             C-------eEEEeeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            1       1233567888999976  3489999999999999999999999999865

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.97  E-value=1.6e-31  Score=265.39  Aligned_cols=258  Identities=19%  Similarity=0.271  Sum_probs=166.8

Q ss_pred             CceeceeCceEEEEEEEccCCc--EEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTEL--EYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~--~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      ++.||+|+||.||+|....++.  .||||.++...  ......+.+|++++..+ +||||+++++++.......   .. 
T Consensus         4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---~~-   78 (272)
T cd05075           4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESE---GY-   78 (272)
T ss_pred             ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCccc---CC-
Confidence            5789999999999999877775  69999886432  12245677899999887 6999999998764322110   00 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           ...++           +.+|--+ +              .+.      .|+..+...        .   +...++
T Consensus        79 -----~~~~~-----------v~e~~~~-~--------------~l~------~~~~~~~~~--------~---~~~~~~  110 (272)
T cd05075          79 -----PSPVV-----------ILPFMKH-G--------------DLH------SFLLYSRLG--------D---CPQYLP  110 (272)
T ss_pred             -----CCcEE-----------EEEeCCC-C--------------cHH------HHHHHhccc--------C---CcccCC
Confidence                 00111           1121000 0              000      000000000        0   000000


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      ...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++....
T Consensus       111 ~~~~~------------------~~~~~---i~~~l~~lH--~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~  164 (272)
T cd05075         111 TQMLV------------------KFMTD---IASGMEYLS--SKSFIHRDLAARNCMLN---ENMNVCVADFGLSKKIYN  164 (272)
T ss_pred             HHHHH------------------HHHHH---HHHHHHHHH--HCCeeccccchhheEEc---CCCCEEECCCCcccccCc
Confidence            00000                  13334   667788888  89999999999999994   445699999999876532


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .....      .-....+++.|+|||++..      ..|+.++|+||+||++|+|++ |.+||.+..             
T Consensus       165 ~~~~~------~~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~-------------  219 (272)
T cd05075         165 GDYYR------QGRIAKMPVKWIAIESLAD------RVYTTKSDVWSFGVTMWEIATRGQTPYPGVE-------------  219 (272)
T ss_pred             cccee------cCCcccCCcccCCHHHccC------CCcChHHHHHHHHHHHHHHHcCCCCCCCCCC-------------
Confidence            21100      0113356788999999863      468889999999999999999 899997642             


Q ss_pred             hhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        368 ACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                        ...+...+..+.. .++    ..++..++++|.+||..||++|||+++++++
T Consensus       220 --~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         220 --NSEIYDYLRQGNRLKQP----PDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             --HHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence              1234555655542 222    3578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=1.5e-31  Score=268.53  Aligned_cols=268  Identities=21%  Similarity=0.279  Sum_probs=170.9

Q ss_pred             chhcccCceeceeCceEEEEEEEcc-----CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~-----t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|.+ .+.||+|+||.||+|..+.     .+..||+|.++.... .....+.+|+.++..+ +||||+++++++.+...
T Consensus         6 ~~~~i-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           6 EKITL-LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             HHcee-eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCC
Confidence            44555 4689999999999997652     345799999864322 1234567899999886 69999999998866543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      .|.+-                 + +              .+...+...   .+....      ... 
T Consensus        84 ~~---lv------~e~~~-----------------~-g--------------~L~~~l~~~---~~~~~~------~~~-  112 (288)
T cd05061          84 TL---VV------MELMA-----------------H-G--------------DLKSYLRSL---RPEAEN------NPG-  112 (288)
T ss_pred             cE---EE------EeCCC-----------------C-C--------------CHHHHHHHh---cccccc------CCC-
Confidence            22   11      11100                 0 0              000000000   000000      000 


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      ....+.....-                     +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+||
T Consensus       113 ~~~~~~~~~~~---------------------~~~~---l~~~l~~lH--~~~i~H~dikp~nili~~---~~~~~L~Df  163 (288)
T cd05061         113 RPPPTLQEMIQ---------------------MAAE---IADGMAYLN--AKKFVHRDLAARNCMVAH---DFTVKIGDF  163 (288)
T ss_pred             CCCCCHHHHHH---------------------HHHH---HHHHHHHHH--hCCCcCCCCChheEEEcC---CCcEEECcC
Confidence            00000000000                     2223   566778888  999999999999999953   456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++.........      .....+++..|+|||.+..      ..++.++|+||+||++|+|++ |.+||.+..     
T Consensus       164 g~~~~~~~~~~~~------~~~~~~~~~~y~~pE~~~~------~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-----  226 (288)
T cd05061         164 GMTRDIYETDYYR------KGGKGLLPVRWMAPESLKD------GVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-----  226 (288)
T ss_pred             Ccccccccccccc------ccCCCcccccccCHHHhcc------CCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-----
Confidence            9987543211100      0112356778999999853      457889999999999999998 789997643     


Q ss_pred             cccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc------CCCccCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK------HPWISTAG  427 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~------Hpw~~~~~  427 (539)
                                .+.....+..+. ..++.    ..++++++||.+||..||++|||+.++++      ||||...+
T Consensus       227 ----------~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         227 ----------NEQVLKFVMDGGYLDQPD----NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             ----------HHHHHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence                      123444444332 33332    46889999999999999999999999886      99998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.97  E-value=7.6e-32  Score=265.06  Aligned_cols=247  Identities=29%  Similarity=0.428  Sum_probs=169.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-----CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-----HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-----~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|....++..||+|.+.....     .....+.+|++++..+ +||||+++++++.++...+    +
T Consensus         5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~----l   79 (258)
T cd06632           5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLY----I   79 (258)
T ss_pred             cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEE----E
Confidence            5789999999999999998999999999864321     1235678899999987 6999999999887654322    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            +.++  ..+.             .+..      |     +..     ....+ ...++
T Consensus        80 ----------------------v~e~--~~~~-------------~L~~------~-----~~~-----~~~~~-~~~~~  105 (258)
T cd06632          80 ----------------------FLEL--VPGG-------------SLAK------L-----LKK-----YGSFP-EPVIR  105 (258)
T ss_pred             ----------------------EEEe--cCCC-------------cHHH------H-----HHh-----cCCCC-HHHHH
Confidence                                  1111  0000             0000      0     000     00000 00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++....
T Consensus       106 ------------------------~~~~~---i~~~l~~lH--~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~~~~  153 (258)
T cd06632         106 ------------------------LYTRQ---ILLGLEYLH--DRNTVHRDIKGANILVD---TNGVVKLADFGMAKQVV  153 (258)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEEccCccceecc
Confidence                                    02223   566777777  99999999999999995   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ...         ......|++.|+|||.+..     ...++.++|+||+||++|+|++|.+||.....            
T Consensus       154 ~~~---------~~~~~~~~~~y~~pe~~~~-----~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------------  207 (258)
T cd06632         154 EFS---------FAKSFKGSPYWMAPEVIAQ-----QGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------------  207 (258)
T ss_pred             ccc---------cccccCCCcceeCHHHhcC-----CCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------------
Confidence            221         1234578999999999853     12378899999999999999999999965421            


Q ss_pred             hhHHHHHHHHhc-C-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        368 ACQEILFHSIQQ-G-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       368 ~~~~~~~~~i~~-~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                        ..... .+.. . ...+    +..+++++++||.+||..||++||++++++.|||+
T Consensus       208 --~~~~~-~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         208 --VAAVF-KIGRSKELPPI----PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             --HHHHH-HHHhcccCCCc----CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence              11122 2221 1 1122    24578999999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=1e-31  Score=266.14  Aligned_cols=255  Identities=22%  Similarity=0.374  Sum_probs=171.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .+.||+|+||.||+|++..+++.||||.+.....   .....+.+|+++++.+ +||||+++++++.+....+   
T Consensus         4 ~~i-~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---   78 (267)
T cd08228           4 FQI-EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELN---   78 (267)
T ss_pred             eee-eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEE---
Confidence            444 5679999999999999999999999998864322   2234578899999987 5999999999887654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .+                       .+|  ..+.             .+...+      ..  ..   . ....    .+
T Consensus        79 ~v-----------------------~e~--~~~~-------------~L~~~~------~~--~~---~-~~~~----~~  104 (267)
T cd08228          79 IV-----------------------LEL--ADAG-------------DLSQMI------KY--FK---K-QKRL----IP  104 (267)
T ss_pred             EE-----------------------EEe--cCCC-------------cHHHHH------HH--hh---h-ccCC----CC
Confidence            11                       111  0000             000000      00  00   0 0000    00


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      .-....                     +..+   ++.++.|+|  ++||+||||||+|||+..   .+.++|+|||++..
T Consensus       105 ~~~~~~---------------------~~~~---i~~~l~~LH--~~~i~H~dl~~~nil~~~---~~~~~l~d~g~~~~  155 (267)
T cd08228         105 ERTVWK---------------------YFVQ---LCSAVEHMH--SRRVMHRDIKPANVFITA---TGVVKLGDLGLGRF  155 (267)
T ss_pred             HHHHHH---------------------HHHH---HHHHHHHHh--hCCeeCCCCCHHHEEEcC---CCCEEECcccccee
Confidence            000001                     2233   667778888  999999999999999943   45699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        ......|++.|+|||++..      ..++.++|+||+||++|+|++|..||......         
T Consensus       156 ~~~~~~--------~~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---------  212 (267)
T cd08228         156 FSSKTT--------AAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---------  212 (267)
T ss_pred             ccchhH--------HHhcCCCCccccChhhhcc------CCCCchhhHHHHHHHHHHHhcCCCCCcccccc---------
Confidence            432211        1224578999999999863      45788999999999999999999999764311         


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          ...+...+....  +|+.....++.++++||.+||..||++||++.++++.
T Consensus       213 ----~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         213 ----LFSLCQKIEQCD--YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             ----HHHHHHHHhcCC--CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence                122344444432  2322234578899999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=8.3e-32  Score=270.39  Aligned_cols=259  Identities=21%  Similarity=0.283  Sum_probs=168.9

Q ss_pred             hhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|.+ .+.||+|+||.||++...     .++..+|+|.+.+........+.+|++++.++ +||||+++++++......+
T Consensus         6 ~~~~-~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           6 NIVL-KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             Heee-ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccE
Confidence            3444 567999999999999753     34567999998765444455788999999987 5999999999987654322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC---CC-CCcccccccccccCCCCC
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV---GS-AEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~---gt-~~y~aPE~~~~~~~~~~~  198 (539)
                         .+                       .+|--+ +              .+...+   +. ..++... ..      ..
T Consensus        84 ---lv-----------------------~e~~~~-~--------------~L~~~i~~~~~~~~~~~~~-~~------~~  115 (288)
T cd05093          84 ---MV-----------------------FEYMKH-G--------------DLNKFLRAHGPDAVLMAEG-NR------PA  115 (288)
T ss_pred             ---EE-----------------------EEcCCC-C--------------CHHHHHHHcCCcccccccc-CC------CC
Confidence               11                       111000 0              000000   00 0000000 00      00


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      .       .....++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       116 ~-------l~~~~~~------------------~~~~q---l~~aL~~lH--~~~i~H~dlkp~Nili~---~~~~~kl~  162 (288)
T cd05093         116 E-------LTQSQML------------------HIAQQ---IAAGMVYLA--SQHFVHRDLATRNCLVG---ENLLVKIG  162 (288)
T ss_pred             C-------CCHHHHH------------------HHHHH---HHHHHHHHH--hCCeeecccCcceEEEc---cCCcEEec
Confidence            0       0000000                  02333   667788888  99999999999999994   44569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED  357 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~  357 (539)
                      |||+++........      .......+++.|+|||++..      ..++.++|+|||||++|+|++ |.+||.+..   
T Consensus       163 dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~~l~t~g~~p~~~~~---  227 (288)
T cd05093         163 DFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTYGKQPWYQLS---  227 (288)
T ss_pred             cCCccccccCCcee------ecCCCCCccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---
Confidence            99998754221110      01123456889999999863      468889999999999999998 999997643   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                  ...+...+..+.+....   ..++.++++||.+||..||.+|||+++++.
T Consensus       228 ------------~~~~~~~i~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         228 ------------NNEVIECITQGRVLQRP---RTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             ------------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                        22345566666532211   257899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=1.6e-31  Score=269.76  Aligned_cols=271  Identities=21%  Similarity=0.283  Sum_probs=172.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+.|++ .+.||+|+||.||+|.+..+++.||||+++...  ......+.+|++++..+ +||||+++++++.+..... 
T Consensus         6 ~~~~~~-~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~-   82 (302)
T cd07864           6 VDKFDI-IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDAL-   82 (302)
T ss_pred             hhhhhe-eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhh-
Confidence            345665 468999999999999999999999999996432  22234567899999987 5999999999887654211 


Q ss_pred             cCCeeeecCCCC-CeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        124 HKRIAHRDLKPE-NILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       124 ~~~IiHrDLK~e-nill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                        .+.+    +. .+.+          +.+|  .                            .......... ....   
T Consensus        83 --~~~~----~~~~~~l----------v~e~--~----------------------------~~~l~~~l~~-~~~~---  112 (302)
T cd07864          83 --DFKK----DKGAFYL----------VFEY--M----------------------------DHDLMGLLES-GLVH---  112 (302)
T ss_pred             --hccc----cCCcEEE----------EEcc--c----------------------------CccHHHHHhc-CCCC---
Confidence              0000    00 0000          1111  0                            0000000000 0000   


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       .+.-..                     ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||+
T Consensus       113 -~~~~~~---------------------~~i~~q---i~~aL~~LH--~~~i~H~dl~p~nili~---~~~~~kl~dfg~  162 (302)
T cd07864         113 -FSEDHI---------------------KSFMKQ---LLEGLNYCH--KKNFLHRDIKCSNILLN---NKGQIKLADFGL  162 (302)
T ss_pred             -CCHHHH---------------------HHHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCcEEeCcccc
Confidence             000000                     013334   667888888  99999999999999994   445699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +.........       ......+++.|+|||++..     ...++.++|+||+||++|+|++|++||...+..+     
T Consensus       163 ~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~-----~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~-----  225 (302)
T cd07864         163 ARLYNSEESR-------PYTNKVITLWYRPPELLLG-----EERYGPAIDVWSCGCILGELFTKKPIFQANQELA-----  225 (302)
T ss_pred             cccccCCccc-------ccccceeccCccChHHhcC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-----
Confidence            8754322110       1112356889999998853     2346789999999999999999999997643211     


Q ss_pred             CccchhhHHHHHHHHhcCC--CCCC---------------------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGH--YDFP---------------------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~--~~~p---------------------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            ..+.+ ..+..+.  ..+|                     ...+..++..+++||.+||..||++||++++++.
T Consensus       226 ------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         226 ------QLELI-SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             ------HHHHH-HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                  00111 1111110  0000                     0123457899999999999999999999999999


Q ss_pred             CCCc
Q psy16343        420 HPWI  423 (539)
Q Consensus       420 Hpw~  423 (539)
                      ||||
T Consensus       299 ~~~~  302 (302)
T cd07864         299 SPWL  302 (302)
T ss_pred             CCCC
Confidence            9997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=1e-31  Score=268.41  Aligned_cols=253  Identities=26%  Similarity=0.352  Sum_probs=167.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc--cccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE--NHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~--~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|....++..+|+|++....  ......+.+|++++..+ +||||+++++++.+..  ..+   .| 
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~---lv-   78 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIY---MV-   78 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEE---EE-
Confidence            357999999999999999999999999997542  22345678899999987 4999999999887652  111   01 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           .+.+              +.++...                   +...               ....       +
T Consensus        79 -----~e~~--------------~~~l~~~-------------------~~~~---------------~~~~-------~   98 (287)
T cd07840          79 -----FEYM--------------DHDLTGL-------------------LDSP---------------EVKF-------T   98 (287)
T ss_pred             -----eccc--------------cccHHHH-------------------Hhcc---------------CCCC-------C
Confidence                 0000              0000000                   0000               0000       0


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      ...+                  ..+..+   ++.++.|+|  ++||+|+||||+|||+.   ..+.+||+|||++.....
T Consensus        99 ~~~~------------------~~i~~~---i~~al~~LH--~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~~~~~~  152 (287)
T cd07840          99 ESQI------------------KCYMKQ---LLEGLQYLH--SNGILHRDIKGSNILIN---NDGVLKLADFGLARPYTK  152 (287)
T ss_pred             HHHH------------------HHHHHH---HHHHHHHHH--HCCceeccCcHHHeEEc---CCCCEEEccccceeeccC
Confidence            0000                  002333   667777777  89999999999999995   445699999999875433


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ...       .......++..|+|||.+.+     ...++.++|+||+||++|+|++|++||.+.+..+           
T Consensus       153 ~~~-------~~~~~~~~~~~y~~PE~~~~-----~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-----------  209 (287)
T cd07840         153 RNS-------ADYTNRVITLWYRPPELLLG-----ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-----------  209 (287)
T ss_pred             CCc-------ccccccccccccCCceeeEc-----cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-----------
Confidence            221       01223467889999998753     2357889999999999999999999997654211           


Q ss_pred             hHHHHHHHHhcCC-----CCCC------------------C---CCCCC-CCHHHHHHHHHhccccccCCCCHHHHhcCC
Q psy16343        369 CQEILFHSIQQGH-----YDFP------------------E---GEWST-ISDEAKDLIRRLLVKDARKRLSAASVLKHP  421 (539)
Q Consensus       369 ~~~~~~~~i~~~~-----~~~p------------------~---~~~~~-~s~~~~dli~~lL~~dP~~R~ta~e~l~Hp  421 (539)
                          ....+....     ..++                  .   ..... .+.++.++|.+||..||.+||++++++.||
T Consensus       210 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~  285 (287)
T cd07840         210 ----QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE  285 (287)
T ss_pred             ----HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence                111111000     0000                  0   00112 388999999999999999999999999999


Q ss_pred             Cc
Q psy16343        422 WI  423 (539)
Q Consensus       422 w~  423 (539)
                      ||
T Consensus       286 ~~  287 (287)
T cd07840         286 YF  287 (287)
T ss_pred             CC
Confidence            97

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=4.2e-32  Score=301.94  Aligned_cols=270  Identities=20%  Similarity=0.280  Sum_probs=169.6

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||+|.+..+++.||||++.+...   ....++.+|++++..+ +||||+++++++.++...+  
T Consensus         3 rYeI-i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~ly--   78 (932)
T PRK13184          3 RYDI-IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVY--   78 (932)
T ss_pred             CeEE-EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEE--
Confidence            3554 4689999999999999999999999999964322   1235688999999987 5999999999887654332  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .+      +|.+-                 + +              .+...+... +.    ...+.    .......
T Consensus        79 -LV------MEY~e-----------------G-G--------------SL~~lL~s~-~~----~~~l~----e~~~~~l  110 (932)
T PRK13184         79 -YT------MPYIE-----------------G-Y--------------TLKSLLKSV-WQ----KESLS----KELAEKT  110 (932)
T ss_pred             -EE------EEcCC-----------------C-C--------------CHHHHHHHh-hh----ccccc----hhhhccc
Confidence             11      11100                 0 0              000000000 00    00000    0000000


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      ++   ..++.                  +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       111 sv---~~iL~------------------I~~Q---Ia~AL~yLH--s~GIIHRDLKPeNILLd---~dg~vKLiDFGLAk  161 (932)
T PRK13184        111 SV---GAFLS------------------IFHK---ICATIEYVH--SKGVLHRDLKPDNILLG---LFGEVVILDWGAAI  161 (932)
T ss_pred             CH---HHHHH------------------HHHH---HHHHHHHHH--HCCccccCCchheEEEc---CCCCEEEEecCcce
Confidence            00   00100                  2233   667788888  99999999999999994   44569999999997


Q ss_pred             ccccCCCCCC----C------CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        285 GIKFNTSVHS----P------LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  354 (539)
Q Consensus       285 ~~~~~~~~~~----~------~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~  354 (539)
                      ..........    .      .........+||+.|||||++.+      ..++.++||||+||++|+|++|.+||.+..
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g------~~~S~kSDIWSLGVILyELLTG~~PF~~~~  235 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG------VPASESTDIYALGVILYQMLTLSFPYRRKK  235 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC------CCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence            6522110000    0      00011124689999999999863      468899999999999999999999997643


Q ss_pred             CCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ...              ............+  ..+..+++.+.+++.+||..||++|++..+.+.+
T Consensus       236 ~~k--------------i~~~~~i~~P~~~--~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        236 GRK--------------ISYRDVILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             hhh--------------hhhhhhccChhhc--cccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            211              1111111111111  1234688999999999999999999987665543

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-31  Score=263.85  Aligned_cols=256  Identities=25%  Similarity=0.425  Sum_probs=170.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|++ ++.||+|+||.||+|.+..++..||+|++....     ......+.+|++++.++ +||||+++++++.+.....
T Consensus         3 ~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           3 NWRL-GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             ceee-eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence            3554 678999999999999999999999999875321     11234677899999997 5999999999876543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .  .+                      +.++  ..+.             .+...+.....+ ++.              
T Consensus        81 ~--~~----------------------v~e~--~~~~-------------~L~~~~~~~~~l-~~~--------------  106 (264)
T cd06653          81 L--SI----------------------FVEY--MPGG-------------SIKDQLKAYGAL-TEN--------------  106 (264)
T ss_pred             E--EE----------------------EEEe--CCCC-------------cHHHHHHHcCCC-CHH--------------
Confidence            0  00                      0011  0000             000000000000 000              


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        .                        ...|..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||+
T Consensus       107 --~------------------------~~~~~~~---i~~al~~LH--~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~  152 (264)
T cd06653         107 --V------------------------TRRYTRQ---ILQGVSYLH--SNMIVHRDIKGANILRD---SAGNVKLGDFGA  152 (264)
T ss_pred             --H------------------------HHHHHHH---HHHHHHHHH--hCCEecCCCCHHHEEEc---CCCCEEECcccc
Confidence              0                        0013334   677788888  99999999999999994   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.......     .........||..|+|||++.+      ..++.++|+||+||++|+|++|.+||.+...       
T Consensus       153 ~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------  214 (264)
T cd06653         153 SKRIQTICM-----SGTGIKSVTGTPYWMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPWAEYEA-------  214 (264)
T ss_pred             ccccccccc-----cCccccccCCcccccCHhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccCH-------
Confidence            875432110     0011234679999999999863      4578899999999999999999999975421       


Q ss_pred             CccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        363 GETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                             .+.+.+.+..+ ...+|    ..++++++++|++||+ +|.+||++.+++.|||+
T Consensus       215 -------~~~~~~~~~~~~~~~~p----~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         215 -------MAAIFKIATQPTKPMLP----DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             -------HHHHHHHHcCCCCCCCC----cccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence                   12222222222 12233    4689999999999999 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0664|consensus

Probab=99.97  E-value=2.2e-33  Score=263.08  Aligned_cols=274  Identities=23%  Similarity=0.321  Sum_probs=182.3

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||-|+||+||.+.+..+|+.||.|.+...-  -...+++++|+++|.-+ +|.|++.++|..+-....+.....|- 
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiYV~-  135 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELYVL-  135 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHHHH-
Confidence            467999999999999999999999999885321  12356899999999876 59999999887654322110000000 


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .|-+-            +                     .+-..+-++.-++|.                    -+-
T Consensus       136 ---TELmQ------------S---------------------DLHKIIVSPQ~Ls~D--------------------HvK  159 (449)
T KOG0664|consen  136 ---TELMQ------------S---------------------DLHKIIVSPQALTPD--------------------HVK  159 (449)
T ss_pred             ---HHHHH------------h---------------------hhhheeccCCCCCcc--------------------hhh
Confidence               00000            0                     000111111111111                    123


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      |++|++|.                        ++.|+|  +.||+||||||.|+|++   .+..+||||||+|+......
T Consensus       160 VFlYQILR------------------------GLKYLH--sA~ILHRDIKPGNLLVN---SNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  160 VFVYQILR------------------------GLKYLH--TANILHRDIKPGNLLVN---SNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             hhHHHHHh------------------------hhHHHh--hcchhhccCCCccEEec---cCceEEecccccccccchhh
Confidence            56666554                        467888  99999999999999994   44568999999998654433


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      ..       .++..+-|-+|+|||++.+     ...|+.++||||+|||+.|||-.+..|...++..++-.+.+..+++.
T Consensus       211 ~~-------hMTqEVVTQYYRAPEiLMG-----aRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs  278 (449)
T KOG0664|consen  211 RL-------NMTHEVVTQYYRAPELLMG-----ARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPS  278 (449)
T ss_pred             hh-------hhHHHHHHHHhccHHHhhc-----chhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCc
Confidence            21       2344578999999999985     46799999999999999999999999998776554322222222222


Q ss_pred             HHHH--------HHHhcCCCCCCCCC--C-----CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        371 EILF--------HSIQQGHYDFPEGE--W-----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       371 ~~~~--------~~i~~~~~~~p~~~--~-----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      .+-+        ..+..+...-|.-.  +     ..-..++.+++.+||..||++|++.++++.|++...
T Consensus       279 ~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e  348 (449)
T KOG0664|consen  279 QEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE  348 (449)
T ss_pred             HHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence            1111        12333333333210  1     123468899999999999999999999999999864

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=1.1e-31  Score=273.25  Aligned_cols=246  Identities=20%  Similarity=0.267  Sum_probs=163.4

Q ss_pred             CceeceeCceEEEEEEEccCCcE----EEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELE----YAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~----vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|....++..    ||||+++... .....++.+|+.++..+ +||||+++++++.......    |
T Consensus        12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~~~~~----v   86 (316)
T cd05108          12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTSTVQL----I   86 (316)
T ss_pred             eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCCCcee----e
Confidence            46799999999999998766654    8999986432 22345678899999886 6999999998875432110    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccch
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                            .+.+              ..|                  .+...+.. ...+..+                 .+
T Consensus        87 ------~e~~--------------~~g------------------~l~~~l~~~~~~~~~~-----------------~~  111 (316)
T cd05108          87 ------TQLM--------------PFG------------------CLLDYVREHKDNIGSQ-----------------YL  111 (316)
T ss_pred             ------eecC--------------CCC------------------CHHHHHHhccccCCHH-----------------HH
Confidence                  0000              000                  00000000 0000000                 00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                             +.                 +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++..
T Consensus       112 -------~~-----------------~~~q---i~~~L~~LH--~~~iiH~dlkp~Nill~~---~~~~kl~DfG~a~~~  159 (316)
T cd05108         112 -------LN-----------------WCVQ---IAKGMNYLE--ERRLVHRDLAARNVLVKT---PQHVKITDFGLAKLL  159 (316)
T ss_pred             -------HH-----------------HHHH---HHHHHHHHH--hcCeeccccchhheEecC---CCcEEEccccccccc
Confidence                   00                 2333   677788888  999999999999999953   456999999999865


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .......      ......+|..|+|||++..      ..|+.++||||+||++|+|++ |.+||.+..           
T Consensus       160 ~~~~~~~------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-----------  216 (316)
T cd05108         160 GADEKEY------HAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----------  216 (316)
T ss_pred             cCCCcce------eccCCccceeecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-----------
Confidence            4322110      0112345678999999863      468899999999999999987 999997642           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          ...+...+ .....+|..  ...+.++.++|.+||..||.+||++.+++.+
T Consensus       217 ----~~~~~~~~-~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         217 ----ASEISSIL-EKGERLPQP--PICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             ----HHHHHHHH-hCCCCCCCC--CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                12222223 233333322  3467899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=2e-31  Score=271.56  Aligned_cols=252  Identities=24%  Similarity=0.359  Sum_probs=172.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||++++..++..||+|++.+...   .....+.+|++++..+ +||||+++++++.++...+    +  
T Consensus        30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~----l--  102 (317)
T cd06635          30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAW----L--  102 (317)
T ss_pred             hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEE----E--
Confidence            4579999999999999999999999999864322   1234678899999987 5999999999887654322    1  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                          +.+|.-+.                +...           +..    .....+ ...++  
T Consensus       103 --------------------v~e~~~g~----------------l~~~-----------~~~----~~~~l~-~~~~~--  128 (317)
T cd06635         103 --------------------VMEYCLGS----------------ASDL-----------LEV----HKKPLQ-EVEIA--  128 (317)
T ss_pred             --------------------EEeCCCCC----------------HHHH-----------HHH----hcCCCC-HHHHH--
Confidence                                11110000                0000           000    000000 00000  


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                            .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++..... 
T Consensus       129 ----------------------~i~~~---i~~~l~~lH--~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~~~~~~-  177 (317)
T cd06635         129 ----------------------AITHG---ALQGLAYLH--SHNMIHRDIKAGNILLT---EPGQVKLADFGSASIASP-  177 (317)
T ss_pred             ----------------------HHHHH---HHHHHHHHH--HCCcccCCCCcccEEEC---CCCCEEEecCCCccccCC-
Confidence                                  02223   567778888  99999999999999994   345699999998764321 


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                                 .....|++.|+|||++...   ....++.++|+||+||++|+|++|.+||.+...              
T Consensus       178 -----------~~~~~~~~~y~aPE~~~~~---~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------------  229 (317)
T cd06635         178 -----------ANSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------------  229 (317)
T ss_pred             -----------cccccCCccccChhhhhcC---CCCCCCccccHHHHHHHHHHHHhCCCCCCCccH--------------
Confidence                       1245789999999998531   123578899999999999999999999976421              


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .......+..+...++.   ..+++.+++||.+||..||.+||++.++++|||+....
T Consensus       230 ~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  284 (317)
T cd06635         230 MSALYHIAQNESPTLQS---NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER  284 (317)
T ss_pred             HHHHHHHHhccCCCCCC---ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence            12223333333323322   35688999999999999999999999999999996543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.97  E-value=1.4e-31  Score=267.47  Aligned_cols=263  Identities=19%  Similarity=0.224  Sum_probs=168.1

Q ss_pred             CceeceeCceEEEEEEEccCC-----cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         53 GEILGKGAYASVQTCVNILTE-----LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~-----~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .+.||+|+||.||+|.....+     ..||+|.+..... .....+.+|++++..+ +||||+++++++.+....+    
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~----   84 (283)
T cd05048          10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQPTC----   84 (283)
T ss_pred             hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCCceE----
Confidence            467999999999999876555     6799999864322 2234678899999987 5999999999887654322    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      ++     .|.+-    +.    .+.+|     +...                  .....++....     .......   
T Consensus        85 ~~-----~e~~~----~~----~L~~~-----l~~~------------------~~~~~~~~~~~-----~~~~~~~---  120 (283)
T cd05048          85 ML-----FEYLA----HG----DLHEF-----LVRN------------------SPHSDVGAESG-----DETVKSS---  120 (283)
T ss_pred             EE-----EecCC----CC----cHHHH-----HHhc------------------CCCcccccccc-----cccccCC---
Confidence            10     11000    00    00000     0000                  00000000000     0000000   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      .+...++.                  +..+   ++.++.|+|  ++||+||||||+|||+.+   .+.+||+|||+++..
T Consensus       121 l~~~~~~~------------------~~~~---l~~al~~lH--~~~i~H~dlkp~Nil~~~---~~~~~L~dfg~~~~~  174 (283)
T cd05048         121 LDCSDFLH------------------IAIQ---IAAGMEYLS--SHHFVHRDLAARNCLVGE---GLTVKISDFGLSRDI  174 (283)
T ss_pred             CCHHHHHH------------------HHHH---HHHHHHHHH--hCCeeccccccceEEEcC---CCcEEECCCcceeec
Confidence            00000000                  2223   667778888  999999999999999953   456999999998744


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......      .......+|+.|+|||++..      ..|+.++|+|||||++|+|++ |..||.+.+.          
T Consensus       175 ~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~il~el~~~g~~p~~~~~~----------  232 (283)
T cd05048         175 YSADYY------RVQSKSLLPVRWMPPEAILY------GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN----------  232 (283)
T ss_pred             cccccc------cccCCCcccccccCHHHhcc------CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH----------
Confidence            221110      01224467899999999853      458899999999999999998 9999987532          


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           ..+...|..+.....   ...+++++.+|+.+||..||.+||++.|+++|
T Consensus       233 -----~~~~~~i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         233 -----QEVIEMIRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             -----HHHHHHHHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                 335556655543211   13678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=1.8e-31  Score=269.34  Aligned_cols=264  Identities=22%  Similarity=0.317  Sum_probs=164.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCc--EEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTEL--EYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~--~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||.||+|....++.  .+|+|.++... ......+.+|++++.++.+||||+++++++......+  
T Consensus         3 ~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~--   79 (297)
T cd05089           3 DIKF-EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY--   79 (297)
T ss_pred             ccee-eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce--
Confidence            3444 4689999999999999877765  46888876422 1223467889999998867999999999887654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .+ .-.....++             .|+     +.....             ...     ++.... ......... ..
T Consensus        80 -lv-~e~~~~~~L-------------~~~-----l~~~~~-------------~~~-----~~~~~~-~~~~~~~l~-~~  119 (297)
T cd05089          80 -IA-IEYAPYGNL-------------LDF-----LRKSRV-------------LET-----DPAFAK-EHGTASTLT-SQ  119 (297)
T ss_pred             -EE-EEecCCCcH-------------HHH-----HHhccc-------------ccc-----cccccc-ccCccCCCC-HH
Confidence             11 000000000             000     000000             000     000000 000000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .+                        ..+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       120 ~~------------------------~~i~~q---i~~al~~lH--~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~  167 (297)
T cd05089         120 QL------------------------LQFASD---VATGMQYLS--EKQFIHRDLAARNVLVG---ENLASKIADFGLSR  167 (297)
T ss_pred             HH------------------------HHHHHH---HHHHHHHHH--HCCcccCcCCcceEEEC---CCCeEEECCcCCCc
Confidence            00                        002333   667778888  99999999999999994   34568999999986


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      .......         .....++..|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+.        
T Consensus       168 ~~~~~~~---------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------  224 (297)
T cd05089         168 GEEVYVK---------KTMGRLPVRWMAIESLNY------SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------  224 (297)
T ss_pred             cccceec---------cCCCCcCccccCchhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence            3221100         011223557999998853      468899999999999999997 9999976532        


Q ss_pred             ccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        364 ETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ..+...+..+. +..|    ..++.++++||.+||..||.+||+++++++.
T Consensus       225 -------~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         225 -------AELYEKLPQGYRMEKP----RNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             -------HHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                   22444444432 1222    3588999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=2.6e-31  Score=265.76  Aligned_cols=266  Identities=18%  Similarity=0.201  Sum_probs=167.8

Q ss_pred             hcccCceeceeCceEEEEEEEccC-----CcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILT-----ELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t-----~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      |++ .+.||+|+||.||+|....+     +..||||+++..... ....+.+|+.++..+ +||||+++++++.+....+
T Consensus         7 ~~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           7 VRF-MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHH-HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCceE
Confidence            443 35689999999999987543     578999999643322 234577888888876 5999999999887654322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .+      .+.+-    ..    .+.++-..+...               ...+..       ....   ....   
T Consensus        85 ---~~------~e~~~----~~----~l~~~l~~~~~~---------------~~~~~~-------~~~~---~~~~---  119 (283)
T cd05091          85 ---MI------FSYCS----HS----DLHEFLVMRSPH---------------SDVGST-------DDDK---TVKS---  119 (283)
T ss_pred             ---EE------EEcCC----CC----cHHHHHHhcCCC---------------cccccc-------cccc---cccc---
Confidence               01      00000    00    000000000000               000000       0000   0000   


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ..+   ...+                  ..+..|   ++.++.|+|  ++||+||||||+|||+.+   .+.+||+|||+
T Consensus       120 ~~~---~~~~------------------~~~~~q---l~~aL~~lH--~~gi~H~dlkp~Nil~~~---~~~~kl~Dfg~  170 (283)
T cd05091         120 TLE---PADF------------------VHIVTQ---IAAGMEFLS--SHHVVHKDLATRNVLVFD---KLNVKISDLGL  170 (283)
T ss_pred             ccC---HHHH------------------HHHHHH---HHHHHHHHH--HcCccccccchhheEecC---CCceEeccccc
Confidence            000   0000                  012334   677888888  999999999999999953   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      ++........      .......+|+.|+|||++..      ..++.++|+|||||++|+|++ |.+||.+..       
T Consensus       171 ~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-------  231 (283)
T cd05091         171 FREVYAADYY------KLMGNSLLPIRWMSPEAIMY------GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-------  231 (283)
T ss_pred             ccccccchhe------eeccCccCCccccCHHHHhc------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-------
Confidence            8754322110      11234456889999999853      357889999999999999998 889997643       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                              ...+...+..+......   ...+.++.+||.+||+.||.+||++++++..
T Consensus       232 --------~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         232 --------NQDVIEMIRNRQVLPCP---DDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             --------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence                    23355666665543211   3578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.97  E-value=5.7e-31  Score=261.26  Aligned_cols=257  Identities=20%  Similarity=0.259  Sum_probs=164.5

Q ss_pred             CceeceeCceEEEEEEEccC---CcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILT---ELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      ++.||+|+||.||+|....+   +..||||++.....  .....+.+|++.+..+ +||||+++++++.........   
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~---   79 (273)
T cd05035           4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKI---   79 (273)
T ss_pred             ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccC---
Confidence            57899999999999987653   47899999864322  2234678899999886 699999999877544321100   


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCcccch
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                             ...          .-+.+|--+ +              .+...+ .......++           .    .+ 
T Consensus        80 -------~~~----------~~v~e~~~~-~--------------~l~~~l~~~~~~~~~~-----------~----~~-  111 (273)
T cd05035          80 -------PKP----------MVILPFMKH-G--------------DLHSFLLYSRLGGLPE-----------K----LP-  111 (273)
T ss_pred             -------ccc----------EEEEeccCC-C--------------CHHHHHHHhhccCCcc-----------c----CC-
Confidence                   000          001111000 0              000000 000000000           0    00 


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                        ...+                  ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       112 --~~~~------------------~~~~~~---i~~aL~~lH--~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~  163 (273)
T cd05035         112 --LQTL------------------LKFMVD---IALGMEYLS--NRNFIHRDLAARNCMLR---EDMTVCVADFGLSKKI  163 (273)
T ss_pred             --HHHH------------------HHHHHH---HHHHHHHHH--hCCeeccccchheEEEC---CCCeEEECCccceeec
Confidence              0000                  002333   667778888  99999999999999994   3456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .......      ......++..|+|||++..      ..++.++|+||+||++|+|++ |.+||.+...          
T Consensus       164 ~~~~~~~------~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~----------  221 (273)
T cd05035         164 YSGDYYR------QGRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN----------  221 (273)
T ss_pred             ccccccc------ccccccCCccccCHhhccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCH----------
Confidence            3322110      0112345678999999852      468889999999999999999 8999976431          


Q ss_pred             chhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           ..++..+..+. +..|    ..++.++.+||.+||..||++||++.|++++
T Consensus       222 -----~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         222 -----HEIYDYLRHGNRLKQP----EDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             -----HHHHHHHHcCCCCCCC----cCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 23445555443 2233    3578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=1e-31  Score=292.46  Aligned_cols=163  Identities=19%  Similarity=0.275  Sum_probs=109.7

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..  ..+.+||+|||+|+.+......       ...+++||+.|||||++...
T Consensus       264 ll~aL~yLH--~~gIiHRDLKP~NILl~~--~~~~~KL~DFGlA~~l~~~~~~-------~~~~~~~t~~Y~APE~~~~~  332 (566)
T PLN03225        264 ILFALDGLH--STGIVHRDVKPQNIIFSE--GSGSFKIIDLGAAADLRVGINY-------IPKEFLLDPRYAAPEQYIMS  332 (566)
T ss_pred             HHHHHHHHH--HCCEEeCcCCHHHEEEeC--CCCcEEEEeCCCcccccccccc-------CCcccccCCCccChHHhhcc
Confidence            667788888  899999999999999953  2356999999999754332211       12367899999999976421


Q ss_pred             CCCC----------------CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCC
Q psy16343        320 MGPE----------------ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD  383 (539)
Q Consensus       320 ~~~~----------------~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  383 (539)
                      ....                ...|+.++||||+||++|+|+++..|+....                ..+...+....+.
T Consensus       333 ~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~----------------~~~~~~l~~~~~~  396 (566)
T PLN03225        333 TQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNL----------------IQFNRQLKRNDYD  396 (566)
T ss_pred             CCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHH----------------HHHHHHHHhcCCc
Confidence            1000                1135667899999999999998766543210                0011111111110


Q ss_pred             -----------CCC------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        384 -----------FPE------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       384 -----------~p~------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                                 ...      ..+......+.|||.+||++||++|||++|+|+||||......
T Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        397 LVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             HHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence                       000      0111234456799999999999999999999999999876553

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=1.4e-31  Score=269.98  Aligned_cols=157  Identities=18%  Similarity=0.190  Sum_probs=114.0

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+|+.+..+...... .........||+.|+|||+..+ 
T Consensus       135 i~~~l~~lH--~~~iiHrDiKp~Nill~---~~~~~~l~DFGla~~~~~~~~~~~~-~~~~~~~~~gt~~y~ape~~~~-  207 (294)
T PHA02882        135 MLTTLEYIH--EHGISHGDIKPENIMVD---GNNRGYIIDYGIASHFIIHGKHIEY-SKEQKDLHRGTLYYAGLDAHNG-  207 (294)
T ss_pred             HHHHHHHHH--hCCeecCCCCHHHEEEc---CCCcEEEEEcCCceeeccCCccccc-ccccccccCCCccccCHHHhCC-
Confidence            667788888  99999999999999994   3456899999999865432211100 0111234579999999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDL  399 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dl  399 (539)
                           ..|+.++||||+||++|+|++|.+||.+.....      +............+..+.+.++     ..++++.++
T Consensus       208 -----~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  271 (294)
T PHA02882        208 -----ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG------NLIHAAKCDFIKRLHEGKIKIK-----NANKFIYDF  271 (294)
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHhCCCCCCccccch------HHHHHhHHHHHHHhhhhhhccC-----CCCHHHHHH
Confidence                 468999999999999999999999998753211      0000111123445555555443     457899999


Q ss_pred             HHHhccccccCCCCHHHHhc
Q psy16343        400 IRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       400 i~~lL~~dP~~R~ta~e~l~  419 (539)
                      ++.|+..||++||+.+++++
T Consensus       272 ~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        272 IECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999999875

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=2.1e-31  Score=269.68  Aligned_cols=261  Identities=25%  Similarity=0.302  Sum_probs=163.4

Q ss_pred             CceeceeCceEEEEEEEccCCcE--EEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELE--YAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~--vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+||.||+|.+..++..  +|+|.+.... ......+.+|++++.++.+||||+++++++..+...+   .| -
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~---lv-~   87 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY---LA-I   87 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce---EE-E
Confidence            46799999999999998887764  5777665322 2233467889999999867999999999987765433   11 0


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                      --+...++.             +     .+...                ++ ....|. ... ........+ .-.++  
T Consensus        88 e~~~~~~L~-------------~-----~l~~~----------------~~-~~~~~~-~~~-~~~~~~~l~-~~~~~--  127 (303)
T cd05088          88 EYAPHGNLL-------------D-----FLRKS----------------RV-LETDPA-FAI-ANSTASTLS-SQQLL--  127 (303)
T ss_pred             EeCCCCcHH-------------H-----HHHhc----------------cc-cccccc-ccc-cccccCcCC-HHHHH--
Confidence            000000000             0     00000                00 000000 000 000000000 00000  


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                       .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++......
T Consensus       128 -~---------------------~~~q---i~~al~~LH--~~gi~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~~~  177 (303)
T cd05088         128 -H---------------------FAAD---VARGMDYLS--QKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVY  177 (303)
T ss_pred             -H---------------------HHHH---HHHHHHHHH--hCCccccccchheEEec---CCCcEEeCccccCcccchh
Confidence             0                     2233   566777887  99999999999999995   3456999999998632111


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      .         ......++..|+|||++..      ..++.++|+||+||++|+|++ |.+||.+.+.             
T Consensus       178 ~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------------  229 (303)
T cd05088         178 V---------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------------  229 (303)
T ss_pred             h---------hcccCCCcccccCHHHHhc------cCCcccccchhhhhHHHHHHhcCCCCcccCCh-------------
Confidence            0         0012234667999998853      457889999999999999998 9999976532             


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                        ...+..+..+ +..+  .+..+++++.+||.+||..||++||++++++.+
T Consensus       230 --~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         230 --AELYEKLPQG-YRLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             --HHHHHHHhcC-CcCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence              2234444332 1111  123578999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.7e-31  Score=258.60  Aligned_cols=248  Identities=29%  Similarity=0.456  Sum_probs=173.3

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||++.+..+++.||+|.+.+...  .....+.+|++++.++ +||||+++++++.+....+    +   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~----~---   76 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLY----I---   76 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEE----E---
Confidence            4689999999999999999999999999965432  2345788999999987 5999999999886653222    1   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         +.+|-  .+.             .+...+........+                 .+|   
T Consensus        77 -------------------v~e~~--~~~-------------~L~~~~~~~~~l~~~-----------------~~~---  102 (254)
T cd06627          77 -------------------ILEYA--ENG-------------SLRQIIKKFGPFPES-----------------LVA---  102 (254)
T ss_pred             -------------------EEecC--CCC-------------cHHHHHHhccCCCHH-----------------HHH---
Confidence                               11110  000             000000000000000                 000   


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..+   ++.++.++|  ++||+||||||+||++..   .+.++|+|||++.......
T Consensus       103 ---------------------~~~~~---i~~~l~~lH--~~~i~H~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~  153 (254)
T cd06627         103 ---------------------VYVYQ---VLQGLAYLH--EQGVIHRDIKAANILTTK---DGVVKLADFGVATKLNDVS  153 (254)
T ss_pred             ---------------------HHHHH---HHHHHHHHh--hCCcccCCCCHHHEEECC---CCCEEEeccccceecCCCc
Confidence                                 02333   667777777  999999999999999954   4569999999987654322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......|+..|+|||.+..      ..++.++|+||+|+++|+|++|.+||.....              .
T Consensus       154 ~--------~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~--------------~  205 (254)
T cd06627         154 K--------DDASVVGTPYWMAPEVIEM------SGASTASDIWSLGCTVIELLTGNPPYYDLNP--------------M  205 (254)
T ss_pred             c--------cccccccchhhcCHhhhcC------CCCCcchhHHHHHHHHHHHHhCCCCCCCccH--------------H
Confidence            1        1234578999999999863      3478899999999999999999999975421              1


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      .............++    ..++.++++||.+||..||++|||+.+++.||||
T Consensus       206 ~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         206 AALFRIVQDDHPPLP----EGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHhccCCCCCC----CCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            222232323333333    3678999999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=4.9e-31  Score=261.01  Aligned_cols=245  Identities=21%  Similarity=0.280  Sum_probs=166.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||+|....++..||+|++.+. ......+.+|++++..+ +||||+++++++......+   .|     
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv-----   80 (263)
T cd05052          11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFY---II-----   80 (263)
T ss_pred             eeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcE---EE-----
Confidence            35799999999999999999999999998643 22345688999999986 5999999999876543322   01     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                                        .+|  ..+.             .+..      |+...        .....    +.-...- 
T Consensus        81 ------------------~e~--~~~~-------------~L~~------~~~~~--------~~~~l----~~~~~~~-  108 (263)
T cd05052          81 ------------------TEF--MTYG-------------NLLD------YLREC--------NRQEV----NAVVLLY-  108 (263)
T ss_pred             ------------------EEe--CCCC-------------cHHH------HHHhC--------CCCCC----CHHHHHH-
Confidence                              111  0000             0000      00000        00000    0000000 


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                          +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.........
T Consensus       109 --------------------~~~q---l~~~l~~lH--~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052         109 --------------------MATQ---ISSAMEYLE--KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             --------------------HHHH---HHHHHHHHH--hCCEeecccCcceEEEc---CCCcEEeCCCccccccccceee
Confidence                                2333   667777888  99999999999999994   4456999999998754322110


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                             ......+++.|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+               .+
T Consensus       161 -------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~---------------~~  212 (263)
T cd05052         161 -------AHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGID---------------LS  212 (263)
T ss_pred             -------ccCCCCCccccCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC---------------HH
Confidence                   0112234678999998853      467889999999999999998 999997653               22


Q ss_pred             HHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        372 ILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       372 ~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ..+..+..+ ...+|    ..++.++.+||.+||..||++||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         213 QVYELLEKGYRMERP----EGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHHHHHCCCCCCCC----CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            344555443 22333    357899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=1.4e-31  Score=267.44  Aligned_cols=268  Identities=26%  Similarity=0.339  Sum_probs=168.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||.||+|....+++.||||.+.+... .......+|+..+.++.+||||+++++++.++...+   .|    
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~---lv----   76 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELY---FV----   76 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEE---EE----
Confidence            4679999999999999988999999999865322 223345678898988756999999999887744322   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                        .|.+-                 +...             ..+..... ..+..+.+                      
T Consensus        77 --~e~~~-----------------~~l~-------------~~~~~~~~-~~~~~~~~----------------------  101 (283)
T cd07830          77 --FEYME-----------------GNLY-------------QLMKDRKG-KPFSESVI----------------------  101 (283)
T ss_pred             --EecCC-----------------CCHH-------------HHHHhccc-ccCCHHHH----------------------
Confidence              11110                 0000             00000000 00000000                      


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                        .                 .+..+   ++.++.|+|  ++||+|+||||+||++.   ..+.++|+|||++....... 
T Consensus       102 --~-----------------~~~~~---l~~~l~~Lh--~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~~~~~~~~-  153 (283)
T cd07830         102 --R-----------------SIIYQ---ILQGLAHIH--KHGFFHRDLKPENLLVS---GPEVVKIADFGLAREIRSRP-  153 (283)
T ss_pred             --H-----------------HHHHH---HHHHHHHHH--HCCcccCCCChhhEEEc---CCCCEEEeecccceeccCCC-
Confidence              0                 02223   667778888  99999999999999994   45669999999987543211 


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                              ......||..|+|||++..     ...++.++|+||+||++|+|++|++||.+....+..+...........
T Consensus       154 --------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~  220 (283)
T cd07830         154 --------PYTDYVSTRWYRAPEILLR-----STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTK  220 (283)
T ss_pred             --------CcCCCCCcccccCceeeec-----CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCCh
Confidence                    1224568999999998853     245788999999999999999999999876432210000000000000


Q ss_pred             HHHH----HHhcCCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        372 ILFH----SIQQGHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       372 ~~~~----~i~~~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..+.    ......+.++.       ......+.++++||.+||+.||++|||++|++.||||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         221 QDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             hhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            0000    00000011110       0112347899999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=5.9e-31  Score=263.31  Aligned_cols=264  Identities=18%  Similarity=0.249  Sum_probs=166.3

Q ss_pred             CceeceeCceEEEEEEEc----cCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNI----LTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~----~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|...    .++..||+|.+...... ....+.+|++++..+ +||||+++++++..+...+   .+
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~---lv   85 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPVC---ML   85 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCceE---EE
Confidence            367999999999999853    45578999998643221 234677899999987 5999999999887654432   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-    ..    .+.++     +..... .         ...+.        -.       .........+
T Consensus        86 ------~e~~~----~~----~L~~~-----l~~~~~-~---------~~~~~--------~~-------~~~~~~~~~~  121 (283)
T cd05090          86 ------FEYLN----QG----DLHEF-----LIMRSP-H---------SDVGC--------SS-------DEDGTVKSSL  121 (283)
T ss_pred             ------EEcCC----CC----cHHHH-----HHhcCC-C---------Ccccc--------cc-------cccccccccc
Confidence                  11000    00    00000     000000 0         00000        00       0000000000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      ....++.                  +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++...
T Consensus       122 ~~~~~~~------------------i~~~---i~~al~~lH--~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~~~~  175 (283)
T cd05090         122 DHGDFLH------------------IAIQ---IAAGMEYLS--SHFFVHKDLAARNILIG---EQLHVKISDLGLSREIY  175 (283)
T ss_pred             CHHHHHH------------------HHHH---HHHHHHHHH--hcCeehhccccceEEEc---CCCcEEecccccccccc
Confidence            0000000                  1222   566777777  99999999999999995   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....      ....+..++..|+|||++.+      ..|+.++|+|||||++|+|++ |.+||.+.+            
T Consensus       176 ~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~~g~~p~~~~~------------  231 (283)
T cd05090         176 SADYY------RVQPKSLLPIRWMPPEAIMY------GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS------------  231 (283)
T ss_pred             CCcce------ecccCCCccceecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------------
Confidence            22110      01124456788999999863      358899999999999999998 999997643            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...+...+...... +  .+..+++++++||.+||..||.+||++++++++
T Consensus       232 ---~~~~~~~~~~~~~~-~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         232 ---NQEVIEMVRKRQLL-P--CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             ---HHHHHHHHHcCCcC-C--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence               12344455443321 1  124678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=2.9e-31  Score=269.34  Aligned_cols=255  Identities=24%  Similarity=0.338  Sum_probs=172.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|.. .+.||+|+||.||+|++..++..||+|.+.....   ....++.+|+++++.+ +|+||+++++++......+  
T Consensus        16 ~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~--   91 (308)
T cd06634          16 LFSD-LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW--   91 (308)
T ss_pred             HHHH-HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeE--
Confidence            3443 3569999999999999999999999999864221   1234577899999987 5999999999887643322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .++..+..                ...           +..    .....+ ..
T Consensus        92 -lv-----------------------~e~~~~~l----------------~~~-----------~~~----~~~~l~-~~  115 (308)
T cd06634          92 -LV-----------------------MEYCLGSA----------------SDL-----------LEV----HKKPLQ-EV  115 (308)
T ss_pred             -EE-----------------------EEccCCCH----------------HHH-----------HHH----cCCCCC-HH
Confidence             11                       11100000                000           000    000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .+                        ..+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++.
T Consensus       116 ~~------------------------~~~~~~---l~~~l~~LH--~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~  163 (308)
T cd06634         116 EI------------------------AAVTHG---ALQGLAYLH--SHNMIHRDVKAGNILLSE---PGLVKLGDFGSAS  163 (308)
T ss_pred             HH------------------------HHHHHH---HHHHHHHHH--hCCcccCCCCHHhEEECC---CCcEEECCcccce
Confidence            00                        002223   567778888  999999999999999953   4569999999976


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ....            .....||+.|+|||++.+..   ...++.++|||||||++|+|++|..||...+.         
T Consensus       164 ~~~~------------~~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------  219 (308)
T cd06634         164 IMAP------------ANXFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------  219 (308)
T ss_pred             eecC------------cccccCCccccCHHHHhhcc---cCCCCcccchHHHHHHHHHHHcCCCCCccccH---------
Confidence            4321            12457899999999985311   23477899999999999999999999975421         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           .+.............+.   ..++..+++||.+||..+|++||+++++++|||+...
T Consensus       220 -----~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         220 -----MSALYHIAQNESPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             -----HHHHHHHhhcCCCCcCc---ccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence                 12222222222222222   3578899999999999999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=5.1e-31  Score=264.54  Aligned_cols=262  Identities=26%  Similarity=0.363  Sum_probs=171.8

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      +.||.|+||.||+|.+..+++.||+|++..... ....++.+|++++..+ +||||++++++|.+.....          
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~----------   75 (287)
T cd06621           7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSS----------   75 (287)
T ss_pred             EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCe----------
Confidence            579999999999999999999999999865322 2345688999999987 5999999999885432110          


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                         ..+           +.++  ..+.             .+...           +..... ......       ... 
T Consensus        76 ---~~l-----------v~e~--~~~~-------------~L~~~-----------l~~~~~-~~~~l~-------~~~-  106 (287)
T cd06621          76 ---IGI-----------AMEY--CEGG-------------SLDSI-----------YKKVKK-RGGRIG-------EKV-  106 (287)
T ss_pred             ---EEE-----------EEEe--cCCC-------------CHHHH-----------HHHHHh-cCCCCC-------HHH-
Confidence               000           1111  0000             00000           000000 000000       000 


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                      +                 ..+..+   ++.++.|+|  ++||+||||+|+||++..   .+.++|+|||++.......  
T Consensus       107 ~-----------------~~i~~~---i~~~L~~lH--~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~--  159 (287)
T cd06621         107 L-----------------GKIAES---VLKGLSYLH--SRKIIHRDIKPSNILLTR---KGQVKLCDFGVSGELVNSL--  159 (287)
T ss_pred             H-----------------HHHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEec---CCeEEEeeccccccccccc--
Confidence            0                 013333   677788888  999999999999999953   4569999999986543211  


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                              .....++..|+|||.+..      ..|+.++|+|||||++|+|++|..||........         . ...
T Consensus       160 --------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---------~-~~~  215 (287)
T cd06621         160 --------AGTFTGTSFYMAPERIQG------KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---------G-PIE  215 (287)
T ss_pred             --------cccccCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC---------C-hHH
Confidence                    124568899999999863      4688899999999999999999999986532100         0 112


Q ss_pred             HHHHHhcCC-CCCCCCCC--CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        373 LFHSIQQGH-YDFPEGEW--STISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       373 ~~~~i~~~~-~~~p~~~~--~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      +...+.... ..++...-  ...++++.+||.+||..||.+|||+.|+++||||...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         216 LLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             HHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence            233333311 12221110  1346889999999999999999999999999999653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=5.7e-31  Score=262.73  Aligned_cols=260  Identities=19%  Similarity=0.245  Sum_probs=168.9

Q ss_pred             hhcccCceeceeCceEEEEEEEcc-----CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~-----t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|.+ .+.||+|+||.||+|....     ++..||+|.+..... .....+.+|+.+++.+ +|+||+++++++.+....
T Consensus         7 ~~~~-~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           7 SITL-LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HcEe-eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCc
Confidence            3444 4689999999999999877     778899998864322 2234678899999987 699999999987654322


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .+      +|.+-                 + +              .+...+...        .  .   .....
T Consensus        85 ~---lv------~e~~~-----------------g-~--------------~L~~~i~~~--------~--~---~~~~~  110 (277)
T cd05036          85 F---IL------LELMA-----------------G-G--------------DLKSFLREN--------R--P---RPERP  110 (277)
T ss_pred             E---EE------EecCC-----------------C-C--------------CHHHHHHHh--------C--C---CCCCC
Confidence            2   11      11100                 0 0              000000000        0  0   00000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                      ...+   +..++                  .+..+   ++.++.|+|  ++||+||||||+|||+...+....+||+|||
T Consensus       111 ~~~~---~~~~~------------------~~~~q---i~~~l~~LH--~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg  164 (277)
T cd05036         111 SSLT---MKDLL------------------FCARD---VAKGCKYLE--ENHFIHRDIAARNCLLTCKGPGRVAKIADFG  164 (277)
T ss_pred             CCCC---HHHHH------------------HHHHH---HHHHHHHHH--HCCEeecccchheEEEeccCCCcceEeccCc
Confidence            0000   00000                  02333   667778888  8999999999999999755444568999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++.+......      .......+++.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+.     
T Consensus       165 ~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~~g~~pf~~~~~-----  227 (277)
T cd05036         165 MARDIYRASYY------RKGGRAMLPIKWMPPEAFLD------GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-----  227 (277)
T ss_pred             cccccCCccce------ecCCCCCccHhhCCHHHHhc------CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence            98754211100      00112334568999999863      458899999999999999997 9999986532     


Q ss_pred             ccCccchhhHHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                ..+...+.. ....+|    ..++.++.+||.+||..||++||+++++++|
T Consensus       228 ----------~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         228 ----------QEVMEFVTGGGRLDPP----KGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             ----------HHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                      223333332 233333    3578999999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.97  E-value=3.1e-31  Score=266.02  Aligned_cols=260  Identities=29%  Similarity=0.428  Sum_probs=174.2

Q ss_pred             CceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         53 GEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.||+|+||.||+|...   .++..||||++.+..    .....++.+|++++..+.+||||+++++.+..+...+   
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~---   81 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH---   81 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE---
Confidence            467999999999998864   467889999986432    1223467789999999878999999998886654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                       +                      +.+|--+ +              .+...+...                ...    .
T Consensus        82 -l----------------------v~e~~~~-~--------------~L~~~~~~~----------------~~~----~  103 (288)
T cd05583          82 -L----------------------ILDYVNG-G--------------ELFTHLYQR----------------EHF----T  103 (288)
T ss_pred             -E----------------------EEecCCC-C--------------cHHHHHhhc----------------CCc----C
Confidence             1                      1111000 0              000000000                000    0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ...+..                     |..|   ++.++.|+|  ++||+||||||.||++.   ..+.++|+|||+++.
T Consensus       104 ~~~~~~---------------------~~~q---l~~~l~~lH--~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~~  154 (288)
T cd05583         104 ESEVRV---------------------YIAE---IVLALDHLH--QLGIIYRDIKLENILLD---SEGHVVLTDFGLSKE  154 (288)
T ss_pred             HHHHHH---------------------HHHH---HHHHHHHHH--HCCeeccCCCHHHeEEC---CCCCEEEEECccccc
Confidence            000000                     2233   566777887  99999999999999994   345699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +......       .....+|++.|+|||++.+.    ...++.++|+||+|+++|+|++|..||.......        
T Consensus       155 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------  215 (288)
T cd05583         155 FLAEEEE-------RAYSFCGTIEYMAPEVIRGG----SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--------  215 (288)
T ss_pred             ccccccc-------ccccccCCccccCHHHhcCC----CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--------
Confidence            4322110       11245789999999998631    1246789999999999999999999996432110        


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC---HHHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS---AASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t---a~e~l~Hpw~~~~~~  428 (539)
                         ....+.+.+.......|    ..++.++++||.+||..||++|||   +.++|+||||....+
T Consensus       216 ---~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         216 ---SQSEISRRILKSKPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             ---hHHHHHHHHHccCCCCC----cccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence               11223344444444444    357899999999999999999998   567899999987665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=1.1e-30  Score=260.49  Aligned_cols=261  Identities=19%  Similarity=0.263  Sum_probs=166.8

Q ss_pred             chhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ .+.||+|+||.||+|.+.     .++..||||.+..... ....++.+|+.+++.+ +||||+++++++..+..
T Consensus         6 ~~~~~-~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           6 EKITM-SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             HHcee-eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCC
Confidence            34665 467999999999999764     2456799999854321 2234578899999886 69999999998876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      .|.+.                 + +              .+...+....   +. ..      ....
T Consensus        84 ~~---lv------~e~~~-----------------~-~--------------~L~~~~~~~~---~~-~~------~~~~  112 (277)
T cd05062          84 TL---VI------MELMT-----------------R-G--------------DLKSYLRSLR---PE-ME------NNPV  112 (277)
T ss_pred             eE---EE------EecCC-----------------C-C--------------CHHHHHHHcC---cc-cc------cccc
Confidence            22   11      11100                 0 0              0000000000   00 00      0000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      ....+...+--                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       113 ~~~~~~~~~~~---------------------~~~~---l~~~l~~lH--~~~~vH~dlkp~Nil~~---~~~~~~l~df  163 (277)
T cd05062         113 QAPPSLKKMIQ---------------------MAGE---IADGMAYLN--ANKFVHRDLAARNCMVA---EDFTVKIGDF  163 (277)
T ss_pred             ccCCCHHHHHH---------------------HHHH---HHHHHHHHH--HCCcccCCcchheEEEc---CCCCEEECCC
Confidence            00000001000                     2223   567778888  99999999999999995   3456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++.+.......      ......+++.|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+     
T Consensus       164 g~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-----  226 (277)
T cd05062         164 GMTRDIYETDYYR------KGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-----  226 (277)
T ss_pred             CCccccCCcceee------cCCCCccCHhhcChhHhhc------CCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----
Confidence            9987543221100      0113456889999999863      458889999999999999998 789997643     


Q ss_pred             cccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        360 WQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                .+.....+..+. ..++    ...+.++++||.+||+.||++|||+.|++++
T Consensus       227 ----------~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         227 ----------NEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             ----------HHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                      223444444433 2333    3578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=2.4e-31  Score=279.24  Aligned_cols=146  Identities=23%  Similarity=0.395  Sum_probs=108.6

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++.........      ...+..|++.|+|||++.. 
T Consensus       246 i~~aL~~LH--~~~ivH~dikp~Nill~~---~~~~kL~DfGla~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-  313 (400)
T cd05105         246 VARGMEFLA--SKNCVHRDLAARNVLLAQ---GKIVKICDFGLARDIMHDSNYV------SKGSTFLPVKWMAPESIFD-  313 (400)
T ss_pred             HHHHHHHHH--hCCeeCCCCChHhEEEeC---CCEEEEEeCCcceecccccccc------ccCCcCCCcceEChhhhcC-
Confidence            667788888  999999999999999953   4569999999987543221100      1123467889999999853 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                           ..|+.++|||||||++|+|++ |..||.+...              ...+...+..+ ..++.  ...++.++++
T Consensus       314 -----~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~--------------~~~~~~~~~~~-~~~~~--~~~~~~~l~~  371 (400)
T cd05105         314 -----NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV--------------DSTFYNKIKSG-YRMAK--PDHATQEVYD  371 (400)
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHCCCCCCcccch--------------hHHHHHHHhcC-CCCCC--CccCCHHHHH
Confidence                 468899999999999999997 9999976421              12234444443 22221  1357899999


Q ss_pred             HHHHhccccccCCCCHHHHhc
Q psy16343        399 LIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l~  419 (539)
                      ||.+||..||++||++.++.+
T Consensus       372 li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         372 IMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HHHHHCccCHhHCcCHHHHHH
Confidence            999999999999999988765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=7.1e-32  Score=263.23  Aligned_cols=139  Identities=27%  Similarity=0.425  Sum_probs=107.7

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..   .+.++++|||++......           .....++..|+|||.+.. 
T Consensus        94 l~~~l~~lH--~~~i~H~dlkp~Nil~~~---~~~~~l~df~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~-  156 (237)
T cd05576          94 MVVALDALH--REGIVCRDLNPNNILLDD---RGHIQLTYFSRWSEVEDS-----------CDGEAVENMYCAPEVGGI-  156 (237)
T ss_pred             HHHHHHHHH--hCCeeccCCCHHHEEEcC---CCCEEEecccchhccccc-----------cccCCcCccccCCcccCC-
Confidence            667788888  999999999999999953   456999999987543211           124567888999998752 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDL  399 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dl  399 (539)
                           ..++.++|+||+||++|+|++|+.||......                ..   ....+.+|    ..+++++++|
T Consensus       157 -----~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------------~~---~~~~~~~~----~~~~~~~~~l  208 (237)
T cd05576         157 -----SEETEACDWWSLGAILFELLTGKTLVECHPSG----------------IN---THTTLNIP----EWVSEEARSL  208 (237)
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------------cc---cccccCCc----ccCCHHHHHH
Confidence                 45788999999999999999999998643110                00   01122334    2578999999


Q ss_pred             HHHhccccccCCCCH-----HHHhcCCCc
Q psy16343        400 IRRLLVKDARKRLSA-----ASVLKHPWI  423 (539)
Q Consensus       400 i~~lL~~dP~~R~ta-----~e~l~Hpw~  423 (539)
                      |.+||+.||++|+++     +++++||||
T Consensus       209 i~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         209 LQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            999999999999986     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.97  E-value=5.9e-31  Score=259.52  Aligned_cols=243  Identities=19%  Similarity=0.288  Sum_probs=162.1

Q ss_pred             eeceeCceEEEEEEE--ccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         55 ILGKGAYASVQTCVN--ILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~--~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .||+|+||.||+|..  ..++..+|+|+++....  .....+.+|+.++..+ +||||+++++++++... +    +   
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~-~----l---   72 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICEAESW-M----L---   72 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCc-E----E---
Confidence            489999999999964  45678899999864322  1245678899999886 69999999988754321 1    1   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         +.++  ..+.             .+...+..                ....+. ..+    
T Consensus        73 -------------------v~e~--~~~~-------------~L~~~l~~----------------~~~~~~-~~~----   97 (257)
T cd05116          73 -------------------VMEL--AELG-------------PLNKFLQK----------------NKHVTE-KNI----   97 (257)
T ss_pred             -------------------EEec--CCCC-------------cHHHHHHh----------------cCCCCH-HHH----
Confidence                               1111  0000             00000000                000000 000    


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..+   ++.++.|+|  ++||+||||||.|||+..   .+.+||+|||+++......
T Consensus        98 --------------------~~i~~q---i~~al~~lH--~~~i~H~dlkp~nill~~---~~~~kl~Dfg~~~~~~~~~  149 (257)
T cd05116          98 --------------------TELVHQ---VSMGMKYLE--ETNFVHRDLAARNVLLVT---QHYAKISDFGLSKALGADE  149 (257)
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCEeecccchhhEEEcC---CCeEEECCCccccccCCCC
Confidence                                013334   667788888  999999999999999953   4569999999987553322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ....     ......+++.|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+               
T Consensus       150 ~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---------------  203 (257)
T cd05116         150 NYYK-----AKTHGKWPVKWYAPECMNY------YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK---------------  203 (257)
T ss_pred             Ceee-----ecCCCCCCccccCHhHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---------------
Confidence            1100     0112345689999998852      457889999999999999998 999997643               


Q ss_pred             HHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        370 QEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       370 ~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ...+...+..+. +.+|    ..++++++|||++||+.||++||++++|..
T Consensus       204 ~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         204 GNEVTQMIESGERMECP----QRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHHHHHHHHCCCCCCCC----CCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            123455566543 2333    358999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=4.3e-31  Score=259.44  Aligned_cols=245  Identities=21%  Similarity=0.299  Sum_probs=162.4

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      +.||+|+||.||+|.+..+++.||+|.+.+.. ......+.+|++++..+ +||||+++++++......+   .|     
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv-----   71 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIY---IV-----   71 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeE---EE-----
Confidence            36899999999999999999999999885432 22345688999999986 6999999999886654322   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                                        .+|--+ +              .+...+..               ...... ...+|.    
T Consensus        72 ------------------~e~~~~-~--------------~L~~~~~~---------------~~~~~~-~~~~~~----   98 (252)
T cd05084          72 ------------------MELVQG-G--------------DFLTFLRT---------------EGPRLK-VKELIQ----   98 (252)
T ss_pred             ------------------EeeccC-C--------------cHHHHHHh---------------CCCCCC-HHHHHH----
Confidence                              111000 0              00000000               000000 000010    


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                          +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++........ 
T Consensus        99 --------------------~~~q---i~~~L~~lH--~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~~~~~~~-  149 (252)
T cd05084          99 --------------------MVEN---AAAGMEYLE--SKHCIHRDLAARNCLVT---EKNVLKISDFGMSREEEDGVY-  149 (252)
T ss_pred             --------------------HHHH---HHHHHHHHH--hCCccccccchheEEEc---CCCcEEECccccCcccccccc-
Confidence                                3334   677888888  99999999999999994   345699999999875332110 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                       ..    ......++..|+|||++..      ..++.++|+|||||++|+|++ |.+||....               ..
T Consensus       150 -~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~---------------~~  203 (252)
T cd05084         150 -AS----TGGMKQIPVKWTAPEALNY------GRYSSESDVWSFGILLWEAFSLGAVPYANLS---------------NQ  203 (252)
T ss_pred             -cc----cCCCCCCceeecCchhhcC------CCCChHHHHHHHHHHHHHHHhCCCCCccccC---------------HH
Confidence             00    0001123457999999863      357889999999999999997 899996532               12


Q ss_pred             HHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        372 ILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       372 ~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .....+..+ ...++    ...+.++++||.+||+.||++|||+.++++
T Consensus       204 ~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         204 QTREAIEQGVRLPCP----ELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHHHHHcCCCCCCc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            233333332 22222    357899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=3.9e-31  Score=262.00  Aligned_cols=142  Identities=18%  Similarity=0.232  Sum_probs=105.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCC----CCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchh
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQ----LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI  315 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~----~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEv  315 (539)
                      ++.++.|+|  ++||+||||||+|||+...+.    ...+|++|||++......            ....||..|+|||+
T Consensus       114 i~~~l~~lH--~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~  179 (262)
T cd05077         114 LASALSYLE--DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR------------QECVERIPWIAPEC  179 (262)
T ss_pred             HHHHHHHhh--hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc------------ccccccccccChhh
Confidence            677888888  999999999999999964321    123899999987643211            23468899999998


Q ss_pred             hcccCCCCCCCCCcccchhhhhHHHHHHH-hCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCH
Q psy16343        316 VNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD  394 (539)
Q Consensus       316 l~~~~~~~~~~y~~~~DiWSlGvily~ll-~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~  394 (539)
                      +..     ...|+.++||||+||++|+|+ .|.+||.+....                ....+..+.+...    ...++
T Consensus       180 ~~~-----~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~----------------~~~~~~~~~~~~~----~~~~~  234 (262)
T cd05077         180 VED-----SKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA----------------EKERFYEGQCMLV----TPSCK  234 (262)
T ss_pred             hcC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh----------------HHHHHHhcCccCC----CCChH
Confidence            852     246888999999999999998 588998754311                0112222333222    23467


Q ss_pred             HHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        395 EAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       395 ~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ++++||.+||..||.+||+..+++++
T Consensus       235 ~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         235 ELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            89999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=2.4e-31  Score=265.24  Aligned_cols=267  Identities=25%  Similarity=0.320  Sum_probs=169.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|++..+++.||+|++....  ......+.+|+++++.+ +|+||+++++++.+....+   .|   
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~---~v---   76 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLY---LV---   76 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceE---EE---
Confidence            357999999999999999999999999997542  22345677899999987 5999999999887653222   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .|                 |  ...              .+...+...               ...       ++..
T Consensus        77 ---~e-----------------~--~~~--------------~l~~~i~~~---------------~~~-------~~~~   98 (282)
T cd07829          77 ---FE-----------------Y--CDM--------------DLKKYLDKR---------------PGP-------LSPN   98 (282)
T ss_pred             ---ec-----------------C--cCc--------------CHHHHHHhh---------------ccC-------CCHH
Confidence               01                 0  000              000000000               000       0000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .+..                  +..+   ++.++.++|  ++||+||||||+||++..   .+.+||+|||++.......
T Consensus        99 ~~~~------------------~~~~---i~~~l~~LH--~~~i~H~~l~~~ni~~~~---~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          99 LIKS------------------IMYQ---LLRGLAYCH--SHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             HHHH------------------HHHH---HHHHHHHHH--HCCcccCCCChheEEEcC---CCCEEEecCCcccccCCCc
Confidence            0000                  2223   566777888  999999999999999954   4669999999987543322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......++..|+|||++..     ...++.++|+||+||++|+|++|.+||.+.+..+........+....
T Consensus       153 ~--------~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (282)
T cd07829         153 R--------TYTHEVVTLWYRAPEILLG-----SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPT  219 (282)
T ss_pred             c--------ccCccccCcCcCChHHhcC-----CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCc
Confidence            1        1223457889999999863     23678899999999999999999999977542110000000000000


Q ss_pred             HHHHHHHhc---CCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQ---GHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~---~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ...+..+..   ....++.       ..++.++.+++++|.+||..||++||++++++.||||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         220 EESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            001100000   0011111       1123468899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=3.5e-31  Score=262.20  Aligned_cols=254  Identities=24%  Similarity=0.428  Sum_probs=170.5

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |.+ .+.||+|+||.||+|.+..++..||||.+.+...   ....++.+|+.+++.+ +||||+++++++.++...+   
T Consensus         4 y~~-~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~---   78 (267)
T cd08229           4 FRI-EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELN---   78 (267)
T ss_pred             hhh-hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEE---
Confidence            444 4679999999999999999999999998864322   2234677899999987 6999999999887654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .+                       .+|--+ +              .+...           +..... ...... ...
T Consensus        79 ~v-----------------------~e~~~~-~--------------~L~~~-----------~~~~~~-~~~~~~-~~~  107 (267)
T cd08229          79 IV-----------------------LELADA-G--------------DLSRM-----------IKHFKK-QKRLIP-EKT  107 (267)
T ss_pred             EE-----------------------EEecCC-C--------------CHHHH-----------HHHhhc-cCCCCC-HHH
Confidence            11                       111000 0              00000           000000 000000 000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      +|                        .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++..
T Consensus       108 ~~------------------------~~~~~---i~~~l~~LH--~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~  155 (267)
T cd08229         108 VW------------------------KYFVQ---LCSALEHMH--SRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRF  155 (267)
T ss_pred             HH------------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHEEEc---CCCCEEECcchhhhc
Confidence            00                        02233   667778888  99999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+|++.|+|||++..      ..++.++|+||+||++|+|++|..||.+....         
T Consensus       156 ~~~~~~--------~~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---------  212 (267)
T cd08229         156 FSSKTT--------AAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---------  212 (267)
T ss_pred             cccCCc--------ccccccCCcCccCHHHhcC------CCccchhhHHHHHHHHHHHHhCCCCcccccch---------
Confidence            432221        1234579999999999853      45788999999999999999999999764321         


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          .......+....  ++...+..++.++++||.+||..||++|||+.++++
T Consensus       213 ----~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         213 ----LYSLCKKIEQCD--YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             ----HHHHhhhhhcCC--CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence                122334444332  233334568899999999999999999999997763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-31  Score=265.71  Aligned_cols=267  Identities=25%  Similarity=0.369  Sum_probs=171.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|++|.||+|.+..+++.+|+|.+.....  .....+.+|+++++.+ +||||+++++++.++...+   .    
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---~----   75 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLY---L----   75 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEE---E----
Confidence            3579999999999999999999999999864322  2345678899999987 4999999999887653222   1    


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         +.++.-+ .               +...           +..    ....       ++..
T Consensus        76 -------------------v~e~~~~-~---------------l~~~-----------l~~----~~~~-------~~~~   98 (283)
T cd05118          76 -------------------VFEFMDT-D---------------LYKL-----------IKD----RQRG-------LPES   98 (283)
T ss_pred             -------------------EEeccCC-C---------------HHHH-----------HHh----hccc-------CCHH
Confidence                               1111000 0               0000           000    0000       0000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .++                  .+..+   ++.++.|+|  ++||+|+||||+||++..   .+.+||+|||++.......
T Consensus        99 ~~~------------------~~~~~---i~~~l~~LH--~~~i~H~dl~p~nili~~---~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          99 LIK------------------SYLYQ---LLQGLAFCH--SHGILHRDLKPENLLINT---EGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             HHH------------------HHHHH---HHHHHHHHH--HCCeeecCcCHHHEEECC---CCcEEEeeeeeeEecCCCc
Confidence            000                  02333   667788888  999999999999999953   4569999999987543322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .        ......++..|+|||++.+     ...++.++|+||+||++|+|++|++||.+.+..+......+......
T Consensus       153 ~--------~~~~~~~~~~~~~PE~~~~-----~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~  219 (283)
T cd05118         153 R--------PYTHYVVTRWYRAPELLLG-----DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPD  219 (283)
T ss_pred             c--------cccCccCcccccCcHHHhc-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc
Confidence            1        1123468899999999863     23678899999999999999999999977543210000000000000


Q ss_pred             HHHH----HHHhcCCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILF----HSIQQGHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~----~~i~~~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ...+    .........++.       ..++.++.++++||.+||.+||.+||++.+++.||||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         220 PEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            0000    000111111211       1234578999999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=7.8e-31  Score=257.84  Aligned_cols=252  Identities=23%  Similarity=0.317  Sum_probs=169.6

Q ss_pred             ceeceeCceEEEEEEEccC---CcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         54 EILGKGAYASVQTCVNILT---ELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +.||+|+||.||+|.....   +..||+|++...... ....+.+|++.+..+. |+||+++++++.+....+   .+  
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~---lv--   74 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLY---LV--   74 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceE---EE--
Confidence            3689999999999998866   889999999754332 2567889999999975 999999999887643322   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC--CcccccccccccCCCCCCCCcccchh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA--EFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~--~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                           .+|.-+ +              .+...+...  .. .+. .       .... ....+|
T Consensus        75 ---------------------~e~~~~-~--------------~L~~~l~~~~~~~-~~~-~-------~~~~-~~~~~~  108 (262)
T cd00192          75 ---------------------LEYMEG-G--------------DLLDYLRKSRPVF-PSP-E-------KSTL-SLKDLL  108 (262)
T ss_pred             ---------------------EEeccC-C--------------cHHHHHhhccccc-ccc-c-------cccC-CHHHHH
Confidence                                 111000 0              000000000  00 000 0       0000 000011


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++....
T Consensus       109 ------------------------~~~~~---l~~al~~lH--~~~i~H~di~p~nili~~---~~~~~l~dfg~~~~~~  156 (262)
T cd00192         109 ------------------------SFAIQ---IAKGMEYLA--SKKFVHRDLAARNCLVGE---DLVVKISDFGLSRDVY  156 (262)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--cCCcccCccCcceEEECC---CCcEEEcccccccccc
Confidence                                    12333   667788888  999999999999999954   4669999999987654


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....      .......+++.|+|||++..      ..++.++|+|||||++|+|++ |..||.+..            
T Consensus       157 ~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------------  212 (262)
T cd00192         157 DDDYY------RKKTGGKLPIRWMAPESLKD------GIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------------  212 (262)
T ss_pred             ccccc------ccccCCCcCccccCHHHhcc------CCcchhhccHHHHHHHHHHHhcCCCCCCCCC------------
Confidence            32210      01234568899999999863      368899999999999999999 699997653            


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...+...+..+. ...|    ..++.++.++|.+||..||++||+++|+++|
T Consensus       213 ---~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         213 ---NEEVLEYLRKGYRLPKP----EYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             ---HHHHHHHHHcCCCCCCC----ccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence               223445555432 2223    3568999999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.9e-31  Score=258.92  Aligned_cols=244  Identities=32%  Similarity=0.490  Sum_probs=173.2

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||.||+|.+..+++.||+|++.+....   ....+..|++++..+ +||||+++++.++++...+   .|     
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---~v-----   71 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLY---LV-----   71 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeE---EE-----
Confidence            69999999999999888999999998754321   234678899999887 5999999998887654332   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       .|.+-                 + +              .+...+.......                 ..++|     
T Consensus        72 -~e~~~-----------------~-~--------------~L~~~l~~~~~l~-----------------~~~~~-----   96 (250)
T cd05123          72 -LEYAP-----------------G-G--------------ELFSHLSKEGRFS-----------------EERAR-----   96 (250)
T ss_pred             -EecCC-----------------C-C--------------cHHHHHHhcCCCC-----------------HHHHH-----
Confidence             11000                 0 0              0000000000000                 00011     


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                         .+..+   ++.++.|+|  ++||+|+||||+||++..   .+.++|+|||++........ 
T Consensus        97 -------------------~~~~q---i~~~l~~lh--~~~~~H~~l~p~ni~~~~---~~~~~l~d~~~~~~~~~~~~-  148 (250)
T cd05123          97 -------------------FYAAE---IVLALEYLH--SLGIIYRDLKPENILLDA---DGHIKLTDFGLAKELSSEGS-  148 (250)
T ss_pred             -------------------HHHHH---HHHHHHHHH--HCCceecCCCcceEEEcC---CCcEEEeecCcceecccCCC-
Confidence                               13333   667778888  899999999999999954   45699999999875432210 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             ......|+..|+|||++.+      ..++.++|+|||||++|+|++|..||...+               ...
T Consensus       149 -------~~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~~---------------~~~  200 (250)
T cd05123         149 -------RTNTFCGTPEYLAPEVLLG------KGYGKAVDWWSLGVLLYEMLTGKPPFYAED---------------RKE  200 (250)
T ss_pred             -------cccCCcCCccccChHHhCC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCC---------------HHH
Confidence                   1234578999999999863      346788999999999999999999996542               133


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH---HHHhcCCCc
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA---ASVLKHPWI  423 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta---~e~l~Hpw~  423 (539)
                      +...+....+.+|.    .++.++++||++||..||++||++   +++++||||
T Consensus       201 ~~~~~~~~~~~~~~----~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         201 IYEKILKDPLRFPE----FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHhcCCCCCCC----CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            45566666666664    468999999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=2.1e-31  Score=270.66  Aligned_cols=258  Identities=18%  Similarity=0.230  Sum_probs=162.4

Q ss_pred             CceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCCCCCe
Q psy16343         60 AYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENI  137 (539)
Q Consensus        60 ~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~eni  137 (539)
                      ++|.|+.+++..++..||||++...  .......+.+|++++..+ +||||++++++|.+....+   .+      .|.+
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~---~~------~e~~   81 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELY---VV------SPLM   81 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEE---EE------Eecc
Confidence            4555666667779999999998653  223345788999999987 5999999999887654322   11      0100


Q ss_pred             eccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcccchhhhhHHHHHH
Q psy16343        138 LCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL  216 (539)
Q Consensus       138 ll~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~l  216 (539)
                                    ..|.                  +...+... ...-||..                   ..      
T Consensus        82 --------------~~~~------------------l~~~l~~~~~~~~~~~~-------------------~~------  104 (314)
T cd08216          82 --------------AYGS------------------CEDLLKTHFPEGLPELA-------------------IA------  104 (314)
T ss_pred             --------------CCCC------------------HHHHHHHhcccCCCHHH-------------------HH------
Confidence                          0000                  00000000 00000000                   00      


Q ss_pred             HhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCC
Q psy16343        217 LCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL  296 (539)
Q Consensus       217 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~  296 (539)
                                     .+.++   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||.+......... ...
T Consensus       105 ---------------~~~~~---l~~~L~~LH--~~~ivH~dlk~~Nili~~---~~~~kl~d~~~~~~~~~~~~~-~~~  160 (314)
T cd08216         105 ---------------FILKD---VLNALDYIH--SKGFIHRSVKASHILLSG---DGKVVLSGLRYSVSMIKHGKR-QRV  160 (314)
T ss_pred             ---------------HHHHH---HHHHHHHHH--HCCeecCCCCcceEEEec---CCceEEecCccceeecccccc-ccc
Confidence                           02333   677888888  999999999999999953   456999999987643221110 000


Q ss_pred             CCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHH
Q psy16343        297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHS  376 (539)
Q Consensus       297 ~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (539)
                      .........++..|+|||++..    ...+|+.++|+||+||++|+|++|.+||......              ......
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--------------~~~~~~  222 (314)
T cd08216         161 VHDFPKSSVKNLPWLSPEVLQQ----NLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--------------QMLLEK  222 (314)
T ss_pred             cccccccccccccccCHHHhcC----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHHHH
Confidence            0111234568889999999863    1246889999999999999999999999764311              111111


Q ss_pred             HhcCCC------C-----------------------CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        377 IQQGHY------D-----------------------FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       377 i~~~~~------~-----------------------~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      +.....      .                       .+...-..++.++++||.+||+.||++|||++|+|+||||...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         223 VRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             HhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            110000      0                       0000001346789999999999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=7.6e-32  Score=266.19  Aligned_cols=243  Identities=15%  Similarity=0.223  Sum_probs=159.1

Q ss_pred             ceeceeCceEEEEEEEccCCc-------EEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         54 EILGKGAYASVQTCVNILTEL-------EYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~-------~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.||+|+||.||+|.+..++.       .+|+|.+.+........+.+|+.++..+ +||||+++++++..+...+   .
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~---l   76 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESI---M   76 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcE---E
Confidence            368999999999999866544       4888887654333345677888888876 6999999999887643322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .+|--+ +              .+...+..               .......   -
T Consensus        77 v-----------------------~e~~~~-g--------------~L~~~l~~---------------~~~~~~~---~  100 (258)
T cd05078          77 V-----------------------QEYVKF-G--------------SLDTYLKK---------------NKNLINI---S  100 (258)
T ss_pred             E-----------------------EecCCC-C--------------cHHHHHhc---------------CCCCCCH---H
Confidence            1                       111000 0              00000000               0000000   0


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-----CCCceeccCC
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-----LSPVKLCDFD  281 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-----~~~ikl~DFG  281 (539)
                      |.                      ..+..|   ++.++.|+|  ++||+||||||+|||+..++.     ...+|++|||
T Consensus       101 ~~----------------------~~~~~q---i~~~l~~lH--~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g  153 (258)
T cd05078         101 WK----------------------LEVAKQ---LAWALHFLE--DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG  153 (258)
T ss_pred             HH----------------------HHHHHH---HHHHHHHHH--HCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence            00                      002333   667777777  999999999999999965432     1237999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC-CCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY-PPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~-~PF~~~~~~~~~~  360 (539)
                      ++.....            .....||+.|+|||++..     ...|+.++|+||+||++|+|++|. +||.....     
T Consensus       154 ~~~~~~~------------~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-----  211 (258)
T cd05078         154 ISITVLP------------KEILLERIPWVPPECIEN-----PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-----  211 (258)
T ss_pred             cccccCC------------chhccccCCccCchhccC-----CCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-----
Confidence            8764321            124578999999999863     245788999999999999999994 66654321     


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                ... ..+......+|.    ..+.++.+||++||+.||++|||++++++.
T Consensus       212 ----------~~~-~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         212 ----------QKK-LQFYEDRHQLPA----PKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ----------HHH-HHHHHccccCCC----CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence                      111 122233445554    356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=8.4e-31  Score=261.67  Aligned_cols=245  Identities=20%  Similarity=0.273  Sum_probs=162.6

Q ss_pred             CceeceeCceEEEEEEEccCCc----EEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTEL----EYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~----~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||+||+|....++.    .||+|++.... ......+.+|+.++..+ +||||+++++++......      
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~------   84 (279)
T cd05109          12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYVCRLLGICLTSTVQ------   84 (279)
T ss_pred             eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcCCCcE------
Confidence            4689999999999999877776    48999986432 22345677899888886 599999999877542111      


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccch
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                                +           +.++--+ +              .+...+.. ...+..                    
T Consensus        85 ----------l-----------~~~~~~~-g--------------~l~~~l~~~~~~~~~--------------------  108 (279)
T cd05109          85 ----------L-----------VTQLMPY-G--------------CLLDYVRENKDRIGS--------------------  108 (279)
T ss_pred             ----------E-----------EEEcCCC-C--------------CHHHHHhhccCCCCH--------------------
Confidence                      1           0111000 0              00000000 000000                    


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                         ..+                  ..|..+   ++.++.|+|  ++||+||||||+|||+.+   .+.+||+|||+++..
T Consensus       109 ---~~~------------------~~~~~q---i~~~L~~lH--~~~iiH~dlkp~Nil~~~---~~~~kL~dfG~~~~~  159 (279)
T cd05109         109 ---QDL------------------LNWCVQ---IAKGMSYLE--EVRLVHRDLAARNVLVKS---PNHVKITDFGLARLL  159 (279)
T ss_pred             ---HHH------------------HHHHHH---HHHHHHHHH--HCCeeccccccceEEEcC---CCcEEECCCCceeec
Confidence               000                  002334   677888888  999999999999999953   456999999998765


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .......      ......+++.|+|||++..      ..|+.++|||||||++|+|++ |.+||....           
T Consensus       160 ~~~~~~~------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----------  216 (279)
T cd05109         160 DIDETEY------HADGGKVPIKWMALESILH------RRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-----------  216 (279)
T ss_pred             cccccee------ecCCCccchhhCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----------
Confidence            4322110      0112235678999999853      468899999999999999998 999996532           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          ...+...+..+... +.  +...+.++.++|.+||..||++||++.+++.
T Consensus       217 ----~~~~~~~~~~~~~~-~~--~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         217 ----AREIPDLLEKGERL-PQ--PPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             ----HHHHHHHHHCCCcC-CC--CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                22344444444321 11  2457899999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=7.1e-31  Score=263.95  Aligned_cols=267  Identities=22%  Similarity=0.308  Sum_probs=167.6

Q ss_pred             hhcccCceeceeCceEEEEEEEccCC-----cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTE-----LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~-----~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|++ .+.||+|+||.||++.....+     ..+|+|++..... .....+.+|++++.++.+||||+++++++..+...
T Consensus        13 ~~~~-~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   91 (293)
T cd05053          13 RLTL-GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL   91 (293)
T ss_pred             HeEE-eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence            4444 468999999999999876443     6899999864321 22345778999999886799999999988765432


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|      .|.+-    +.    .+     ...+.....               ...+.+.....        ...
T Consensus        92 ~---li------~e~~~----~~----~L-----~~~l~~~~~---------------~~~~~~~~~~~--------~~~  126 (293)
T cd05053          92 Y---VV------VEYAA----HG----NL-----RDFLRARRP---------------PGEYASPDDPR--------PPE  126 (293)
T ss_pred             E---EE------EEeCC----CC----cH-----HHHHHhcCC---------------Ccccccccccc--------ccc
Confidence            2   11      11000    00    00     000000000               00000000000        000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                      ...   +...++                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       127 ~~l---~~~~~~------------------~i~~q---i~~al~~LH--~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg  177 (293)
T cd05053         127 ETL---TQKDLV------------------SFAYQ---VARGMEFLA--SKKCIHRDLAARNVLVT---EDHVMKIADFG  177 (293)
T ss_pred             ccc---CHHHHH------------------HHHHH---HHHHHHHHH--HCCccccccceeeEEEc---CCCeEEeCccc
Confidence            000   000000                  02333   667788888  99999999999999995   34569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++.........      ......++..|+|||++..      ..|+.++||||+||++|+|++ |..||.+..      
T Consensus       178 ~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~------  239 (293)
T cd05053         178 LARDIHHIDYYR------KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------  239 (293)
T ss_pred             ccccccccccee------ccCCCCCCccccCHHHhcc------CCcCcccceeehhhHHHHHhcCCCCCCCCCC------
Confidence            987543221100      0112335678999998752      468899999999999999997 999997643      


Q ss_pred             ccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                               ...++..+..+. +..+    ...+.++.+||.+||..||++|||+.|++++
T Consensus       240 ---------~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         240 ---------VEELFKLLKEGYRMEKP----QNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             ---------HHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence                     223444444432 2222    3568999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=7.3e-31  Score=260.95  Aligned_cols=259  Identities=25%  Similarity=0.309  Sum_probs=162.3

Q ss_pred             ceeceeCceEEEEEEEccCCc--EEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         54 EILGKGAYASVQTCVNILTEL--EYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~--~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++||+|+||.||+|....++.  .+|+|.+.... ......+.+|++++.++.+||||+++++++......+    ++  
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~----lv--   74 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY----LA--   74 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCce----EE--
Confidence            368999999999999988776  46888876432 2234567889999999878999999999987654322    11  


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .|.+-    +.    .+.+     .+......            ...+.+......       ....       +.-
T Consensus        75 ---~e~~~----~~----~L~~-----~i~~~~~~------------~~~~~~~~~~~~-------~~~l-------~~~  112 (270)
T cd05047          75 ---IEYAP----HG----NLLD-----FLRKSRVL------------ETDPAFAIANST-------ASTL-------SSQ  112 (270)
T ss_pred             ---EEeCC----CC----cHHH-----HHHhcccc------------ccccccccccCC-------cCCC-------CHH
Confidence               11000    00    0000     00000000            000000000000       0000       000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .+                  ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.......
T Consensus       113 ~~------------------~~~~~~---i~~al~~lH--~~~i~H~dikp~nili~---~~~~~kl~dfgl~~~~~~~~  166 (270)
T cd05047         113 QL------------------LHFAAD---VARGMDYLS--QKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYV  166 (270)
T ss_pred             HH------------------HHHHHH---HHHHHHHHH--HCCEeecccccceEEEc---CCCeEEECCCCCccccchhh
Confidence            00                  012333   667788888  89999999999999994   44569999999986322110


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .         .....+++.|+|||++..      ..|+.++|+|||||++|+|++ |..||.+.+.              
T Consensus       167 ~---------~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------------  217 (270)
T cd05047         167 K---------KTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------------  217 (270)
T ss_pred             h---------ccCCCCccccCChHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCccccCH--------------
Confidence            0         012234667999999852      468889999999999999997 9999976431              


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                       ...+..+..+. ..+  ....++.++.+||.+||..||.+|||++++++
T Consensus       218 -~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         218 -AELYEKLPQGY-RLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             -HHHHHHHhCCC-CCC--CCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence             22344444331 111  12357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=4.9e-31  Score=261.72  Aligned_cols=249  Identities=18%  Similarity=0.274  Sum_probs=164.4

Q ss_pred             hcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |++ .++||+|+||.||+|...   ..+..||+|+++.... .....+.+|+.++.++ +||||+++++++..+...+  
T Consensus         7 ~~~-~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~--   82 (266)
T cd05064           7 IKI-ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTMM--   82 (266)
T ss_pred             eEE-eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCcE--
Confidence            444 578999999999999765   3456899999865322 2234678899999886 6999999999886543322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                      +.+|--+ +              .+...+..               ...... ..
T Consensus        83 --l----------------------v~e~~~~-~--------------~L~~~l~~---------------~~~~l~-~~  107 (266)
T cd05064          83 --I----------------------VTEYMSN-G--------------ALDSFLRK---------------HEGQLV-AG  107 (266)
T ss_pred             --E----------------------EEEeCCC-C--------------cHHHHHHh---------------CCCCCC-HH
Confidence              1                      1111000 0              00000000               000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+|++|||++.
T Consensus       108 ~~~------------------------~~~~~---i~~al~~lH--~~~iiH~dikp~nili~---~~~~~~l~dfg~~~  155 (266)
T cd05064         108 QLM------------------------GMLPG---LASGMKYLS--EMGYVHKGLAAHKVLVN---SDLVCKISGFRRLQ  155 (266)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--HCCEeeccccHhhEEEc---CCCcEEECCCcccc
Confidence            000                        02333   667788887  99999999999999994   34568999999875


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      ........       ......+|+.|+|||++..      ..|+.++||||+||++|+|++ |.+||.+.+.        
T Consensus       156 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--------  214 (266)
T cd05064         156 EDKSEAIY-------TTMSGKSPVLWAAPEAIQY------HHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--------  214 (266)
T ss_pred             cccccchh-------cccCCCCceeecCHHHHhh------CCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--------
Confidence            43211110       0112345778999999863      468899999999999999764 9999976532        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ..+...+..+. .+|.  ...++..+.+|+.+|+..||.+||+++++++
T Consensus       215 -------~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         215 -------QDVIKAVEDGF-RLPA--PRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             -------HHHHHHHHCCC-CCCC--CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence                   23445555442 2222  2467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=7.4e-31  Score=266.06  Aligned_cols=268  Identities=25%  Similarity=0.315  Sum_probs=169.4

Q ss_pred             chhcccCceeceeCceEEEEEEEcc-------CCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL-------TELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~-------t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      +.|.+ ++.||+|+||.||++.+..       +...+|+|++.... ......+.+|++++..+.+||||+++++++...
T Consensus        18 ~~~~i-~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          18 DRLVL-GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             HHeEE-eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            45655 6789999999999998643       23569999986432 223456788999999886799999999998765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|      .|.+-.   +     .|.+     .+....             ..+...+..+...         
T Consensus        97 ~~~~---lv------~e~~~~---~-----~L~~-----~i~~~~-------------~~~~~~~~~~~~~---------  132 (307)
T cd05098          97 GPLY---VI------VEYASK---G-----NLRE-----YLRARR-------------PPGMEYCYNPTQV---------  132 (307)
T ss_pred             CceE---EE------EecCCC---C-----cHHH-----HHHhcC-------------CcccccccccccC---------
Confidence            4332   11      111100   0     0000     000000             0000000000000         


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                          .....++..++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       133 ----~~~~l~~~~~~------------------~~~~q---i~~aL~~lH--~~gi~H~dlkp~Nill~---~~~~~kL~  182 (307)
T cd05098         133 ----PEEQLSFKDLV------------------SCAYQ---VARGMEYLA--SKKCIHRDLAARNVLVT---EDNVMKIA  182 (307)
T ss_pred             ----ccccCCHHHHH------------------HHHHH---HHHHHHHHH--HCCcccccccHHheEEc---CCCcEEEC
Confidence                00000011111                  02334   667788888  99999999999999994   34569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED  357 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~  357 (539)
                      |||+++.........      ......+++.|+|||++.+      ..|+.++|+||+||++|+|++ |.+||.+.+   
T Consensus       183 dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~el~~~g~~p~~~~~---  247 (307)
T cd05098         183 DFGLARDIHHIDYYK------KTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---  247 (307)
T ss_pred             CCcccccccccchhh------ccccCCCccceeChHHhcc------CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC---
Confidence            999987543211100      0111234578999999863      458889999999999999998 889997643   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  .+.++..+..+. ..+|    ..++.++++||.+||..||++||++.+++++
T Consensus       248 ------------~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         248 ------------VEELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             ------------HHHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                        233455555443 2333    3578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=1.1e-30  Score=254.86  Aligned_cols=248  Identities=30%  Similarity=0.460  Sum_probs=170.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||++.+..++..+++|++..........+.+|++.+..+. ||||+++++++......+    +     
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~----l-----   74 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELW----I-----   74 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEE----E-----
Confidence            467999999999999998899999999997544334567889999999875 999999999886653221    1     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                       +.++-  .+.             .+...+.. ...+..                 .+++    
T Consensus        75 -----------------~~e~~--~~~-------------~L~~~~~~~~~~~~~-----------------~~~~----  101 (253)
T cd05122          75 -----------------VMEFC--SGG-------------SLKDLLKSTNQTLTE-----------------SQIA----  101 (253)
T ss_pred             -----------------EEecC--CCC-------------cHHHHHhhcCCCCCH-----------------HHHH----
Confidence                             11110  000             00000000 000000                 0000    


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                          .+..+   ++.++.++|  .+||+||||||+||++..   .+.++|+|||++........
T Consensus       102 --------------------~i~~~---i~~~l~~lh--~~~i~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~~~~  153 (253)
T cd05122         102 --------------------YVCKE---LLKGLEYLH--SNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLSDTKA  153 (253)
T ss_pred             --------------------HHHHH---HHHHHHHhh--cCCEecCCCCHHHEEEcc---CCeEEEeecccccccccccc
Confidence                                02233   567778888  899999999999999954   45699999999875433211


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                               .....|+..|+|||++..      ..++.++|+||+||++|+|++|.+||...+.              ..
T Consensus       154 ---------~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------------~~  204 (253)
T cd05122         154 ---------RNTMVGTPYWMAPEVING------KPYDYKADIWSLGITAIELAEGKPPYSELPP--------------MK  204 (253)
T ss_pred             ---------ccceecCCcccCHHHHcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCch--------------HH
Confidence                     235678999999999863      3477899999999999999999999975421              11


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                      .+..........++..  ..++.++.+||.+||..||++|||+.|+|+|||
T Consensus       205 ~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         205 ALFKIATNGPPGLRNP--EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHhcCCCCcCcc--cccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            1222222222223221  124889999999999999999999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=8.4e-31  Score=265.24  Aligned_cols=253  Identities=23%  Similarity=0.355  Sum_probs=165.1

Q ss_pred             hcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      |.+ .+.||+|+||.||+|...     .++..||||++++... .....+.+|++++.++.+||||+++++++......+
T Consensus        37 ~~~-~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  115 (302)
T cd05055          37 LSF-GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL  115 (302)
T ss_pred             eEE-cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence            443 578999999999999753     3456899999865322 223467889999999867999999999886553322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .+                       .+|--+ +              .+..      |     +..   ...... .
T Consensus       116 ---lv-----------------------~e~~~~-~--------------~L~~------~-----i~~---~~~~~l-~  139 (302)
T cd05055         116 ---VI-----------------------TEYCCY-G--------------DLLN------F-----LRR---KRESFL-T  139 (302)
T ss_pred             ---EE-----------------------EEcCCC-C--------------cHHH------H-----HHh---CCCCCC-C
Confidence               11                       111000 0              0000      0     000   000000 0


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ..+++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       140 ~~~~~------------------------~i~~~---i~~~l~~lH--~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~  187 (302)
T cd05055         140 LEDLL------------------------SFSYQ---VAKGMAFLA--SKNCIHRDLAARNVLLT---HGKIVKICDFGL  187 (302)
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--HCCeehhhhccceEEEc---CCCeEEECCCcc
Confidence            00000                        02233   667778888  99999999999999994   445689999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      ++.........      ......+++.|+|||++..      ..++.++||||+||++|+|++ |.+||.+....     
T Consensus       188 ~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-----  250 (302)
T cd05055         188 ARDIMNDSNYV------VKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-----  250 (302)
T ss_pred             cccccCCCcee------ecCCCCcccccCCHhhhcc------CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-----
Confidence            87543221100      0112356788999999853      457889999999999999998 99999765321     


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                               +.....+..+ +..+.  ...+++++.+||.+||..||++|||+.|+++
T Consensus       251 ---------~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         251 ---------SKFYKLIKEG-YRMAQ--PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             ---------HHHHHHHHcC-CcCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                     1222333333 22221  2357899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=6.7e-31  Score=263.34  Aligned_cols=261  Identities=27%  Similarity=0.403  Sum_probs=177.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|+. .+.||+|+||.||+|.+..++..||+|++..... ....+.+|++++..+ +|+||+++++++......+  
T Consensus        17 ~~~~~~~-~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~--   91 (286)
T cd06614          17 PRELYKN-LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDC-KHPNIVDYYDSYLVGDELW--   91 (286)
T ss_pred             ccccchH-hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEE--
Confidence            4455654 4679999999999999998999999999965433 356788999999987 5999999999887653322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                      +.++  ..+.             .+...+...               ....    
T Consensus        92 --l----------------------v~e~--~~~~-------------~L~~~l~~~---------------~~~l----  113 (286)
T cd06614          92 --V----------------------VMEY--MDGG-------------SLTDIITQN---------------FVRM----  113 (286)
T ss_pred             --E----------------------EEec--cCCC-------------cHHHHHHHh---------------ccCC----
Confidence              1                      1111  0000             000000000               0000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      +   ...++.                  +..+   ++.++.|+|  ++||+|+||||+||++.   ..+.++|+|||++.
T Consensus       114 ~---~~~~~~------------------i~~~---i~~~L~~lH--~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~~  164 (286)
T cd06614         114 N---EPQIAY------------------VCRE---VLQGLEYLH--SQNVIHRDIKSDNILLS---KDGSVKLADFGFAA  164 (286)
T ss_pred             C---HHHHHH------------------HHHH---HHHHHHHHH--hCCeeeCCCChhhEEEc---CCCCEEECccchhh
Confidence            0   000000                  1222   556777777  89999999999999995   34569999999876


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ...+..|++.|+|||++.+      ..++.++|+||+||++|+|++|..||...+.         
T Consensus       165 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~---------  221 (286)
T cd06614         165 QLTKEKS--------KRNSVVGTPYWMAPEVIKR------KDYGPKVDIWSLGIMCIEMAEGEPPYLREPP---------  221 (286)
T ss_pred             hhccchh--------hhccccCCcccCCHhHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCH---------
Confidence            4332211        1124568899999999853      4588999999999999999999999975431         


Q ss_pred             cchhhHHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                            ......+.. +...++.  ...++.++++||.+||..||.+||++.+++.||||....+
T Consensus       222 ------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         222 ------LRALFLITTKGIPPLKN--PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP  278 (286)
T ss_pred             ------HHHHHHHHhcCCCCCcc--hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence                  112222322 2222222  2347899999999999999999999999999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=7.9e-31  Score=262.20  Aligned_cols=260  Identities=20%  Similarity=0.256  Sum_probs=164.9

Q ss_pred             CceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||++...     .++..+|+|.+.+........+.+|++++..+ +||||+++++++.+....+   .+
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv   85 (280)
T cd05092          10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRPLL---MV   85 (280)
T ss_pred             ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCceE---EE
Confidence            467999999999998643     35668999998765444456788999999987 6999999999887654322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-                 + +              .+...+..   ..|+... ..... .......+.-
T Consensus        86 ------~e~~~-----------------~-~--------------~L~~~i~~---~~~~~~~-~~~~~-~~~~~~l~~~  122 (280)
T cd05092          86 ------FEYMR-----------------H-G--------------DLNRFLRS---HGPDAKI-LAGGE-DVAPGQLTLG  122 (280)
T ss_pred             ------EecCC-----------------C-C--------------CHHHHHHh---cCcchhh-hcccc-cCCccccCHH
Confidence                  11000                 0 0              00000000   0000000 00000 0000000000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      ...-                     +..+   ++.++.|+|  ++||+||||||+|||+.+   .+.+||+|||++....
T Consensus       123 ~~~~---------------------~~~q---i~~al~~LH--~~~i~H~dlkp~nil~~~---~~~~kL~dfg~~~~~~  173 (280)
T cd05092         123 QMLA---------------------IASQ---IASGMVYLA--SLHFVHRDLATRNCLVGQ---GLVVKIGDFGMSRDIY  173 (280)
T ss_pred             HHHH---------------------HHHH---HHHHHHHHH--HCCeecccccHhhEEEcC---CCCEEECCCCceeEcC
Confidence            0000                     2233   667778887  999999999999999953   4569999999986442


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......      ......+++.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.....           
T Consensus       174 ~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----------  230 (280)
T cd05092         174 STDYYR------VGGRTMLPIRWMPPESILY------RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN-----------  230 (280)
T ss_pred             CCceee------cCCCccccccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcCCCCCCccCCH-----------
Confidence            211100      1123346788999998863      468899999999999999998 9999965431           


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          ......+..+. +..+    ..+++++.+||.+||..||.+||+++++++
T Consensus       231 ----~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         231 ----TEAIECITQGRELERP----RTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             ----HHHHHHHHcCccCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                22344444443 2222    357899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=1.6e-30  Score=256.83  Aligned_cols=250  Identities=21%  Similarity=0.310  Sum_probs=165.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|... ++..||+|.+.... .....+.+|+.++..+ +|+||+++++++.+....+   .
T Consensus         6 ~~~~~-~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   78 (261)
T cd05072           6 ESIKL-VKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIY---I   78 (261)
T ss_pred             HHeEE-eeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcE---E
Confidence            34555 467999999999999864 56779999885422 2356788899999986 5999999998886554322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                       .++--+ +              .+...           +...   ......     
T Consensus        79 v-----------------------~e~~~~-~--------------~L~~~-----------l~~~---~~~~~~-----  101 (261)
T cd05072          79 I-----------------------TEYMAK-G--------------SLLDF-----------LKSD---EGGKVL-----  101 (261)
T ss_pred             E-----------------------EecCCC-C--------------cHHHH-----------HHHh---cCCCCC-----
Confidence            1                       111000 0              00000           0000   000000     


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                        .-.+                  ..|..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       102 --~~~~------------------~~~~~~---l~~~l~~LH--~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~~~  153 (261)
T cd05072         102 --LPKL------------------IDFSAQ---IAEGMAYIE--RKNYIHRDLRAANVLVS---ESLMCKIADFGLARVI  153 (261)
T ss_pred             --HHHH------------------HHHHHH---HHHHHHHHH--HCCeeccccchhhEEec---CCCcEEECCCccceec
Confidence              0000                  002333   667788888  89999999999999995   4456899999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......++..|+|||++..      ..++.++|+|||||++|+|++ |..||.+..           
T Consensus       154 ~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-----------  209 (261)
T cd05072         154 EDNEYT-------AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-----------  209 (261)
T ss_pred             CCCcee-------ccCCCccceecCCHHHhcc------CCCChhhhhhhhHHHHHHHHccCCCCCCCCC-----------
Confidence            322110       1112346778999999853      357889999999999999998 999997643           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          .......+..+ +.+|.  ...++.++.+||.+||..||++||+++++++
T Consensus       210 ----~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         210 ----NSDVMSALQRG-YRMPR--MENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             ----HHHHHHHHHcC-CCCCC--CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                12244444443 23332  2467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=1.9e-30  Score=254.46  Aligned_cols=251  Identities=29%  Similarity=0.459  Sum_probs=172.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||++.+..++..||+|++.....  .....+.+|++++..+. |||++++++.+.++...+    +   
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~----l---   76 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLC----I---   76 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEE----E---
Confidence            3679999999999999999999999999965432  34556888999999874 999999999886653221    1   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         +.++.-+ +              .+...           +....  .      +...++..
T Consensus        77 -------------------v~e~~~~-~--------------~L~~~-----------l~~~~--~------~~~~~~~~  103 (258)
T cd08215          77 -------------------VMEYADG-G--------------DLSQK-----------IKKQK--K------EGKPFPEE  103 (258)
T ss_pred             -------------------EEEecCC-C--------------cHHHH-----------HHHhh--c------cCCCcCHH
Confidence                               1111000 0              00000           00000  0      00000000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      .++                  .+..+   ++.++.++|  ++||+|+||||+||++..   .+.++|+|||++.......
T Consensus       104 ~~~------------------~i~~~---i~~~l~~lh--~~~~~H~dl~~~nil~~~---~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215         104 QIL------------------DWFVQ---LCLALKYLH--SRKILHRDIKPQNIFLTS---NGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             HHH------------------HHHHH---HHHHHHHHH--hCCEecccCChHHeEEcC---CCcEEECCccceeecccCc
Confidence            000                  02333   667778888  899999999999999953   4569999999987543321


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                              ......+|++.|+|||.+..      ..++.++|+||+|+++|+|++|..||....               .
T Consensus       158 --------~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---------------~  208 (258)
T cd08215         158 --------DLAKTVVGTPYYLSPELCQN------KPYNYKSDIWSLGCVLYELCTLKHPFEGEN---------------L  208 (258)
T ss_pred             --------ceecceeeeecccChhHhcc------CCCCccccHHHHHHHHHHHHcCCCCCCCCc---------------H
Confidence                    11235689999999998753      457889999999999999999999996543               1


Q ss_pred             HHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      ..+...+..... .+|    ..++.++.++|.+||..||++|||+.++|+||||
T Consensus       209 ~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         209 LELALKILKGQYPPIP----SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            223333333322 222    2578999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=1.3e-30  Score=268.71  Aligned_cols=146  Identities=23%  Similarity=0.354  Sum_probs=108.1

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..........      ...+..+++.|+|||++.. 
T Consensus       188 i~~al~~lH--~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-  255 (343)
T cd05103         188 VAKGMEFLA--SRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYV------RKGDARLPLKWMAPETIFD-  255 (343)
T ss_pred             HHHHHHHHH--hCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchh------hcCCCCCCcceECcHHhcC-
Confidence            667788888  99999999999999994   44579999999987542211100      1113346678999999852 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAK  397 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~  397 (539)
                           ..|+.++|+||+||++|+|++ |..||.+...              ...+...+..+. ...|    ..+++++.
T Consensus       256 -----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------------~~~~~~~~~~~~~~~~~----~~~~~~~~  312 (343)
T cd05103         256 -----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI--------------DEEFCRRLKEGTRMRAP----DYTTPEMY  312 (343)
T ss_pred             -----CCCCchhhHHHHHHHHHHHHHCCCCCCCCccc--------------cHHHHHHHhccCCCCCC----CCCCHHHH
Confidence                 468899999999999999997 9999976421              112333343332 2222    23688999


Q ss_pred             HHHHHhccccccCCCCHHHHhcC
Q psy16343        398 DLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       398 dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      +++.+||..||++||++.|+++|
T Consensus       313 ~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         313 QTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.6e-30  Score=254.79  Aligned_cols=245  Identities=19%  Similarity=0.290  Sum_probs=161.4

Q ss_pred             ceeceeCceEEEEEEEccCC---cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         54 EILGKGAYASVQTCVNILTE---LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~---~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +.||+|+||.||+|+...++   ..||+|.+..... .....+.+|++++..+ +|||||+++++++.... +       
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~-~-------   71 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLIGVCKGEPL-M-------   71 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEcCCce-E-------
Confidence            36899999999999876554   7899999865432 2345678899999986 69999999987753311 1       


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                              +           +.+|--+ +              .+...+....-. ++.                     
T Consensus        72 --------~-----------v~e~~~~-~--------------~L~~~l~~~~~~-~~~---------------------   95 (257)
T cd05060          72 --------L-----------VMELAPL-G--------------PLLKYLKKRREI-PVS---------------------   95 (257)
T ss_pred             --------E-----------EEEeCCC-C--------------cHHHHHHhCCCC-CHH---------------------
Confidence                    1           1111000 0              000000000000 000                     


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                       .                  ...|..+   ++.++.|+|  .+||+||||||+|||+..   .+.+||+|||+++.....
T Consensus        96 -~------------------~~~~~~q---i~~~l~~lh--~~~i~H~di~p~nili~~---~~~~kl~df~~~~~~~~~  148 (257)
T cd05060          96 -D------------------LKELAHQ---VAMGMAYLE--SKHFVHRDLAARNVLLVN---RHQAKISDFGMSRALGAG  148 (257)
T ss_pred             -H------------------HHHHHHH---HHHHHHHHh--hcCeeccCcccceEEEcC---CCcEEeccccccceeecC
Confidence             0                  0013334   667777887  999999999999999953   456999999998765433


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      .....     .....-++..|+|||.+..      ..++.++|+|||||++|+|++ |.+||...+.             
T Consensus       149 ~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-------------  204 (257)
T cd05060         149 SDYYR-----ATTAGRWPLKWYAPECINY------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-------------  204 (257)
T ss_pred             Ccccc-----cccCccccccccCHHHhcC------CCCCccchHHHHHHHHHHHHcCCCCCcccCCH-------------
Confidence            21110     0011123567999998853      468889999999999999998 9999975431             


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                        ..+...+..+.. .+  ....++..+++||.+||..||++||++.++++
T Consensus       205 --~~~~~~~~~~~~-~~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         205 --AEVIAMLESGER-LP--RPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             --HHHHHHHHcCCc-CC--CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence              224444544432 11  12357899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=3e-30  Score=255.23  Aligned_cols=255  Identities=25%  Similarity=0.449  Sum_probs=171.5

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|.+ .+.||+|+||.||+|.+..+|+.||+|.++...   ......+.+|++++.++ +|+||+++++++.+....+  
T Consensus         3 ~y~~-~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~--   78 (267)
T cd08224           3 NFKI-EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELN--   78 (267)
T ss_pred             ceee-eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEE--
Confidence            4554 467999999999999999999999999886422   22345788999999997 6999999999887653322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .+|--+ +              .+...           +..... ...... ..
T Consensus        79 -lv-----------------------~e~~~~-~--------------~L~~~-----------l~~~~~-~~~~~~-~~  106 (267)
T cd08224          79 -IV-----------------------LELADA-G--------------DLSRM-----------IKHFKK-QKRLIP-ER  106 (267)
T ss_pred             -EE-----------------------EecCCC-C--------------CHHHH-----------HHHhcc-cCCCcC-HH
Confidence             11                       111000 0              00000           000000 000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .|..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++.
T Consensus       107 ~~~------------------------~~~~~---l~~~l~~lh--~~~i~h~dl~p~nil~~---~~~~~~l~d~~~~~  154 (267)
T cd08224         107 TIW------------------------KYFVQ---LCSALEHMH--SKRIMHRDIKPANVFIT---ATGVVKLGDLGLGR  154 (267)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--hCCEecCCcChhhEEEC---CCCcEEEeccceee
Confidence            000                        02333   667788888  99999999999999995   34569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ......|++.|+|||++.+      ..|+.++|+||+||++|+|++|..||.+....        
T Consensus       155 ~~~~~~~--------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------  212 (267)
T cd08224         155 FFSSKTT--------AAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--------  212 (267)
T ss_pred             eccCCCc--------ccceecCCccccCHHHhcc------CCCCchhcHHHHHHHHHHHHHCCCCcccCCcc--------
Confidence            5433221        1234579999999999863      46888999999999999999999999764311        


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ...+...+..+.+  ++..+..++.+++++|.+||..||++|||+.++++
T Consensus       213 -----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         213 -----LYSLCKKIEKCDY--PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             -----HHHHHhhhhcCCC--CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                 1223344444432  22122367889999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.6e-30  Score=257.46  Aligned_cols=260  Identities=20%  Similarity=0.267  Sum_probs=167.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCC-----cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTE-----LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~-----~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|.+ .+.||+|+||.||+|.....+     ..||+|.+..... .....+.+|+.++..+ +||||+++++++.....
T Consensus         6 ~~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           6 EKITL-IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             HHeeE-EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCCC
Confidence            44554 467999999999999876443     7899999864321 2234677899999886 69999999999876533


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+    ++     .|.+-                 + +              .+...+-.  . .++..       .   
T Consensus        84 ~~----~v-----~e~~~-----------------~-~--------------~L~~~l~~--~-~~~~~-------~---  109 (277)
T cd05032          84 TL----VV-----MELMA-----------------K-G--------------DLKSYLRS--R-RPEAE-------N---  109 (277)
T ss_pred             cE----EE-----EecCC-----------------C-C--------------CHHHHHHh--c-ccchh-------h---
Confidence            22    11     11000                 0 0              00000000  0 00000       0   


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      ...........++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       110 ~~~~~~~~~~~~~------------------~~~~~---i~~~l~~lH--~~~i~H~di~p~nill~---~~~~~kl~df  163 (277)
T cd05032         110 NPGLGPPTLQKFI------------------QMAAE---IADGMAYLA--AKKFVHRDLAARNCMVA---EDLTVKIGDF  163 (277)
T ss_pred             ccCCCCCCHHHHH------------------HHHHH---HHHHHHHHH--hCCccccccChheEEEc---CCCCEEECCc
Confidence            0000000000000                  02233   667777887  99999999999999995   4456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++.+......      .......+|..|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+     
T Consensus       164 g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----  226 (277)
T cd05032         164 GMTRDIYETDYY------RKGGKGLLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-----  226 (277)
T ss_pred             ccchhhccCccc------ccCCCCCccccccCHHHHhc------CCCCcccchHHHHHHHHHhhccCCCCCccCC-----
Confidence            998754322110      01224567889999999853      457889999999999999998 999997643     


Q ss_pred             cccCccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        360 WQRGETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                .......+..+ .+.+|.    ..+.++.+||.+||+.||++|||+.+++.
T Consensus       227 ----------~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         227 ----------NEEVLKFVIDGGHLDLPE----NCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             ----------HHHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                      22344444433 334443    46899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=2.3e-30  Score=255.11  Aligned_cols=243  Identities=19%  Similarity=0.250  Sum_probs=160.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |++ .+.||+|+||.||++..  .|..||+|.++..  .....+.+|+.+++.+ +|+||+++++++.......   .+ 
T Consensus         8 ~~~-~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---~l-   77 (256)
T cd05082           8 LKL-LQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGL---YI-   77 (256)
T ss_pred             Cee-eeeecccCCCeEEEEEE--cCCcEEEEEeCCC--chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCce---EE-
Confidence            443 47899999999999865  4778999998643  2345688999999987 5999999998653322111   01 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                           +.++--+ +              .+...+..          .    ......     | 
T Consensus        78 ---------------------v~e~~~~-~--------------~L~~~~~~----------~----~~~~~~-----~-  101 (256)
T cd05082          78 ---------------------VTEYMAK-G--------------SLVDYLRS----------R----GRSVLG-----G-  101 (256)
T ss_pred             ---------------------EEECCCC-C--------------cHHHHHHh----------c----CCCCCC-----H-
Confidence                                 1111000 0              00000000          0    000000     0 


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                       ..+                  ..+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++.....
T Consensus       102 -~~~------------------~~~~~~---i~~~l~~lH--~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~  154 (256)
T cd05082         102 -DCL------------------LKFSLD---VCEAMEYLE--ANNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             -HHH------------------HHHHHH---HHHHHHHHH--hCCEeccccchheEEEc---CCCcEEecCCccceeccc
Confidence             000                  002333   667777887  99999999999999995   345699999999874322


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ..           .+..++..|+|||++..      ..++.++|+||+||++|+|++ |.+||...+             
T Consensus       155 ~~-----------~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-------------  204 (256)
T cd05082         155 TQ-----------DTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------------  204 (256)
T ss_pred             cC-----------CCCccceeecCHHHHcc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-------------
Confidence            11           13355678999999853      468889999999999999997 999997543             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                        ...+...+..+..   ......+++.+++||.+||..||++|||++++++
T Consensus       205 --~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         205 --LKDVVPRVEKGYK---MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             --HHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence              2234444544321   1112467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=2.5e-30  Score=254.76  Aligned_cols=243  Identities=19%  Similarity=0.285  Sum_probs=162.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||++... .+..+|+|.+.+.. ....++.+|++++.++ +||||+++++++......+    +     
T Consensus         9 ~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~----i-----   76 (256)
T cd05114           9 MKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLY----I-----   76 (256)
T ss_pred             eeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEE----E-----
Confidence            467999999999999765 45679999886432 3356788999999987 5999999999887654322    1     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC-CCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                       +.+|--+ +              .+...+. ....++.+                       .
T Consensus        77 -----------------v~e~~~~-~--------------~L~~~~~~~~~~~~~~-----------------------~  101 (256)
T cd05114          77 -----------------VTEFMEN-G--------------CLLNYLRQRQGKLSKD-----------------------M  101 (256)
T ss_pred             -----------------EEEcCCC-C--------------cHHHHHHhCccCCCHH-----------------------H
Confidence                             1111000 0              0000000 00000000                       0


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                      ++                  .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||+++.......
T Consensus       102 ~~------------------~~~~~---i~~~l~~lH--~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05114         102 LL------------------SMCQD---VCEGMEYLE--RNSFIHRDLAARNCLVS---STGVVKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             HH------------------HHHHH---HHHHHHHHH--HCCccccccCcceEEEc---CCCeEEECCCCCccccCCCce
Confidence            00                  02233   667777777  99999999999999995   345689999999875432111


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .       ......++..|+|||++..      ..|+.++|+||+||++|+|++ |++||.+.+               .
T Consensus       156 ~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~---------------~  207 (256)
T cd05114         156 T-------SSSGAKFPVKWSPPEVFNF------SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS---------------N  207 (256)
T ss_pred             e-------ccCCCCCchhhCChhhccc------CccchhhhhHHHHHHHHHHHcCCCCCCCCCC---------------H
Confidence            0       0112235668999999852      468889999999999999999 999997653               1


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ......+..+.....+   ...+.++.+||.+||..||++||+++++++
T Consensus       208 ~~~~~~i~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         208 YEVVEMISRGFRLYRP---KLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            2344555554332211   246789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=6.2e-30  Score=252.55  Aligned_cols=248  Identities=20%  Similarity=0.258  Sum_probs=163.5

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||.||+|... .+..+|+|.+.... .....+.+|+.+++++ +||||+++++++..... +   
T Consensus         5 ~~~~~~-~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~-~---   76 (260)
T cd05070           5 RESLQL-IKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGT-MSPESFLEEAQIMKKL-RHDKLVQLYAVVSEEPI-Y---   76 (260)
T ss_pred             hHHhhh-hheeccccCceEEEEEec-CCceeEEEEecCCC-CCHHHHHHHHHHHHhc-CCCceEEEEeEECCCCc-E---
Confidence            445665 467999999999999765 56679999986432 2356788999999997 69999999987743211 1   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                                  +           +.++--+ +              .+...+..              .....    .+
T Consensus        77 ------------l-----------v~e~~~~-~--------------~L~~~~~~--------------~~~~~----~~  100 (260)
T cd05070          77 ------------I-----------VTEYMSK-G--------------SLLDFLKD--------------GEGRA----LK  100 (260)
T ss_pred             ------------E-----------EEEecCC-C--------------cHHHHHHh--------------cCCCC----CC
Confidence                        1           0111000 0              00000000              00000    00


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      .-....                     +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++..
T Consensus       101 ~~~~~~---------------------~~~~---l~~al~~lH--~~~i~H~di~p~Nili~~---~~~~~l~dfg~~~~  151 (260)
T cd05070         101 LPNLVD---------------------MAAQ---VAAGMAYIE--RMNYIHRDLRSANILVGD---GLVCKIADFGLARL  151 (260)
T ss_pred             HHHHHH---------------------HHHH---HHHHHHHHH--HCCcccCCCccceEEEeC---CceEEeCCceeeee
Confidence            000001                     2333   667788888  999999999999999953   45689999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......       ......++..|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+.         
T Consensus       152 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---------  209 (260)
T cd05070         152 IEDNEYT-------ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---------  209 (260)
T ss_pred             ccCcccc-------cccCCCCCccccChHHHhc------CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---------
Confidence            4322110       0112345678999998853      457889999999999999999 9999976431         


Q ss_pred             cchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        365 TCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                            ......+..+ .+..+    ...+.++++||.+||.+||++|||++++.
T Consensus       210 ------~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         210 ------REVLEQVERGYRMPCP----QDCPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             ------HHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence                  2233444433 22222    35789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=5.7e-30  Score=252.81  Aligned_cols=251  Identities=20%  Similarity=0.301  Sum_probs=165.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||.||+|... ++..||+|.+.+.. ....++.+|+.+++++ +||||+++++++.... .+  
T Consensus         4 ~~~~~~~-~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~--   76 (260)
T cd05067           4 PRETLKL-VKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQL-QHPRLVRLYAVVTQEP-IY--   76 (260)
T ss_pred             chHHcee-eeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhc-CCcCeeeEEEEEccCC-cE--
Confidence            3456666 478999999999999854 56789999986433 3456788999999987 5999999998774321 11  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                   +           +.+|--+ +              .+...           +..   ....... ..
T Consensus        77 -------------~-----------v~e~~~~-~--------------~L~~~-----------~~~---~~~~~~~-~~  102 (260)
T cd05067          77 -------------I-----------ITEYMEN-G--------------SLVDF-----------LKT---PEGIKLT-IN  102 (260)
T ss_pred             -------------E-----------EEEcCCC-C--------------CHHHH-----------HHh---cCCCCCC-HH
Confidence                         0           1111000 0              00000           000   0000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+..+   ++.++.|+|  ++||+||||||+||++.   ..+.++|+|||++.
T Consensus       103 ~~~------------------------~i~~~---i~~al~~LH--~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~  150 (260)
T cd05067         103 KLI------------------------DMAAQ---IAEGMAFIE--RKNYIHRDLRAANILVS---ETLCCKIADFGLAR  150 (260)
T ss_pred             HHH------------------------HHHHH---HHHHHHHHh--cCCeecccccHHhEEEc---CCCCEEEccCccee
Confidence            000                        02233   667778888  99999999999999995   34569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      ........       ......++..|+|||++..      ..++.++|+||+||++|+|++ |++||.+.+.        
T Consensus       151 ~~~~~~~~-------~~~~~~~~~~y~~pe~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------  209 (260)
T cd05067         151 LIEDNEYT-------AREGAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--------  209 (260)
T ss_pred             ecCCCCcc-------cccCCcccccccCHHHhcc------CCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--------
Confidence            54321110       0113346778999999863      457889999999999999998 9999976532        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ..+...+..+ +..+  .....+.++++||.+||..||++||++++++.
T Consensus       210 -------~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         210 -------PEVIQNLERG-YRMP--RPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             -------HHHHHHHHcC-CCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                   1233333333 2222  22457889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=2.8e-30  Score=262.71  Aligned_cols=267  Identities=22%  Similarity=0.312  Sum_probs=167.4

Q ss_pred             chhcccCceeceeCceEEEEEEEcc-------CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL-------TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~-------t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      +.|.+ ++.||+|+||.||+|.+..       ....||+|++..... .....+.+|++++..+.+||||+++++++.+.
T Consensus        12 ~~~~~-~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          12 DRLVL-GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHeee-eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            34444 5789999999999998642       345799999864322 22346778999999886799999999988765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .+      .|.+..   +     .|.++     +.....              ....+.    ..      ..
T Consensus        91 ~~~~---lv------~e~~~~---g-----~L~~~-----i~~~~~--------------~~~~~~----~~------~~  124 (314)
T cd05099          91 GPLY---VI------VEYAAK---G-----NLREF-----LRARRP--------------PGPDYT----FD------IT  124 (314)
T ss_pred             CceE---EE------EecCCC---C-----cHHHH-----HHhcCC--------------Cccccc----cc------cc
Confidence            4322   11      111100   0     00000     000000              000000    00      00


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      .  .....+++.-++.                  +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+
T Consensus       125 ~--~~~~~l~~~~~~~------------------~~~q---i~~aL~~lH--~~gi~H~dlkp~Nill~~---~~~~kL~  176 (314)
T cd05099         125 K--VPEEQLSFKDLVS------------------CAYQ---VARGMEYLE--SRRCIHRDLAARNVLVTE---DNVMKIA  176 (314)
T ss_pred             C--CcccccCHHHHHH------------------HHHH---HHHHHHHHH--HCCeeeccccceeEEEcC---CCcEEEc
Confidence            0  0000011111100                  2223   667788888  999999999999999953   4569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED  357 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~  357 (539)
                      |||+++........      .......+++.|+|||++..      ..|+.++||||+||++|+|++ |..||.+.+   
T Consensus       177 Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~~g~~p~~~~~---  241 (314)
T cd05099         177 DFGLARGVHDIDYY------KKTSNGRLPVKWMAPEALFD------RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP---  241 (314)
T ss_pred             cccccccccccccc------cccccCCCCccccCHHHHcc------CCcCccchhhHHHHHHHHHHhCCCCCCCCCC---
Confidence            99998754321110      01112234568999999853      468899999999999999999 899997643   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                  ...++..+..+. ..++    ..++.++++||.+||..||++||++.|+++
T Consensus       242 ------------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         242 ------------VEELFKLLREGHRMDKP----SNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             ------------HHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                        233555555443 2222    357889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=2e-30  Score=261.01  Aligned_cols=262  Identities=18%  Similarity=0.207  Sum_probs=163.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCC----------------cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeee
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTE----------------LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQ  110 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~----------------~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~  110 (539)
                      .|++ .+.||+|+||.||+|.+..++                ..||+|++..... .....+.+|++++..+ +||||++
T Consensus         6 ~~~~-~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~   83 (296)
T cd05051           6 PLNF-VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNIAR   83 (296)
T ss_pred             hCcc-cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCEeE
Confidence            4555 467999999999999876544                4589999864322 2345678899999997 5999999


Q ss_pred             eeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccc
Q psy16343        111 LLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN  190 (539)
Q Consensus       111 l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~  190 (539)
                      +++++.++...+    ++     .|.+-                 + +              .+...+........ .. 
T Consensus        84 ~~~~~~~~~~~~----lv-----~e~~~-----------------~-~--------------~L~~~l~~~~~~~~-~~-  120 (296)
T cd05051          84 LLGVCTVDPPLC----MI-----MEYME-----------------N-G--------------DLNQFLQKHVAETS-GL-  120 (296)
T ss_pred             EEEEEecCCCcE----EE-----EecCC-----------------C-C--------------CHHHHHHhcccccc-cc-
Confidence            999987653322    11     11000                 0 0              00000000000000 00 


Q ss_pred             cccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC
Q psy16343        191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD  270 (539)
Q Consensus       191 ~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~  270 (539)
                             .......+...+..                     +..+   ++.++.|+|  ++||+||||||+|||+..  
T Consensus       121 -------~~~~~~~~~~~~~~---------------------~~~~---i~~al~~LH--~~~i~H~dlkp~Nili~~--  165 (296)
T cd05051         121 -------ACNSKSLSFSTLLY---------------------MATQ---IASGMRYLE--SLNFVHRDLATRNCLVGK--  165 (296)
T ss_pred             -------cccCCCCCHHHHHH---------------------HHHH---HHHHHHHHH--HcCccccccchhceeecC--
Confidence                   00000000000111                     2233   667788888  899999999999999954  


Q ss_pred             CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh--CCC
Q psy16343        271 QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC--GYP  348 (539)
Q Consensus       271 ~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~--G~~  348 (539)
                       .+.++|+|||+++........      ....+..+|+.|+|||++..      ..|+.++|+||+||++|+|++  |..
T Consensus       166 -~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~~~~~~~  232 (296)
T cd05051         166 -NYTIKIADFGMSRNLYSSDYY------RVQGRAPLPIRWMAWESVLL------GKFTTKSDVWAFGVTLWEILTLCREQ  232 (296)
T ss_pred             -CCceEEccccceeecccCcce------eecCcCCCCceecCHHHhhc------CCCCccchhhhhHHHHHHHHhcCCCC
Confidence             366999999998754322110      01124567889999999863      358899999999999999988  778


Q ss_pred             CCCCCCCCCCCcccCccchhhHHHHHHHHhcC------CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQG------HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       349 PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ||...+.               ..++..+...      ...++.  ...++.++.+||.+||..||.+|||+.|+++
T Consensus       233 p~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         233 PYEHLTD---------------QQVIENAGHFFRDDGRQIYLPR--PPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             CCCCcCh---------------HHHHHHHHhccccccccccCCC--ccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            8865421               1122222211      111111  1346789999999999999999999999964

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.97  E-value=3.4e-30  Score=257.54  Aligned_cols=245  Identities=19%  Similarity=0.271  Sum_probs=160.1

Q ss_pred             CceeceeCceEEEEEEEccCCcE----EEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTELE----YAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~----vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||+||+|....++..    +|+|.+..... .....+..|+.++.++ +||||+++++++.....+     +
T Consensus        12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~~~~~~-----~   85 (279)
T cd05111          12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICPGASLQ-----L   85 (279)
T ss_pred             ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-CCCCcceEEEEECCCccE-----E
Confidence            46899999999999998877764    67777643221 1224566677777775 699999999987533211     1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC-CCCcccccccccccCCCCCCCCcccch
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                                            +.++.-+ +              .+...+. ....+.++..                 
T Consensus        86 ----------------------i~e~~~~-g--------------sL~~~l~~~~~~~~~~~~-----------------  111 (279)
T cd05111          86 ----------------------VTQLSPL-G--------------SLLDHVRQHRDSLDPQRL-----------------  111 (279)
T ss_pred             ----------------------EEEeCCC-C--------------cHHHHHHhcccCCCHHHH-----------------
Confidence                                  0111000 0              0000000 0000000000                 


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                              ..|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       112 ------------------------~~i~~q---i~~~l~~lH--~~~iiH~dlkp~nili~---~~~~~kl~Dfg~~~~~  159 (279)
T cd05111         112 ------------------------LNWCVQ---IAKGMYYLE--EHRMVHRNLAARNILLK---SDSIVQIADFGVADLL  159 (279)
T ss_pred             ------------------------HHHHHH---HHHHHHHHH--HCCEeccccCcceEEEc---CCCcEEEcCCccceec
Confidence                                    013444   677888888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......      .......|+..|+|||++..      ..|+.++|+||+||++|+|++ |.+||.+...          
T Consensus       160 ~~~~~~------~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~----------  217 (279)
T cd05111         160 YPDDKK------YFYSEHKTPIKWMALESILF------GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP----------  217 (279)
T ss_pred             cCCCcc------cccCCCCCcccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH----------
Confidence            322110      01123467788999999863      458899999999999999998 9999976531          


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ..+...+..+......   ...+.+..+++.+|+..||++|||+.|+++
T Consensus       218 -----~~~~~~~~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         218 -----HEVPDLLEKGERLAQP---QICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             -----HHHHHHHHCCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                 2233334444322211   245778999999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.97  E-value=1.4e-30  Score=261.94  Aligned_cols=262  Identities=19%  Similarity=0.280  Sum_probs=165.9

Q ss_pred             CceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|...     .++..+|+|.+..........+.+|++++..+ +||||+++++++.+....+   .|
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv   85 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDPLI---MV   85 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCceE---EE
Confidence            467999999999999854     34567999998654333345688999999987 5999999999987654322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-    +.    .+.+|     +...                 .+..+.  ....    .......+   .
T Consensus        86 ------~e~~~----~~----~L~~~-----i~~~-----------------~~~~~~--~~~~----~~~~~~~~---~  120 (291)
T cd05094          86 ------FEYMK----HG----DLNKF-----LRAH-----------------GPDAMI--LVDG----QPRQAKGE---L  120 (291)
T ss_pred             ------EecCC----CC----cHHHH-----HHhc-----------------Cccccc--cccc----ccccCcCC---C
Confidence                  11100    00    00000     0000                 000000  0000    00000000   0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++....
T Consensus       121 ~~~~~~------------------~i~~~---i~~al~~lH--~~~i~H~dlkp~Nil~~---~~~~~~l~dfg~a~~~~  174 (291)
T cd05094         121 GLSQML------------------HIASQ---IASGMVYLA--SQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVY  174 (291)
T ss_pred             CHHHHH------------------HHHHH---HHHHHHHHH--hCCeeecccCcceEEEc---cCCcEEECCCCcccccC
Confidence            000000                  02233   667777777  99999999999999995   44569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....      .......|++.|+|||++..      ..|+.++|+||+||++|+|++ |.+||...+            
T Consensus       175 ~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p~~~~~------------  230 (291)
T cd05094         175 STDYY------RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVILWEIFTYGKQPWFQLS------------  230 (291)
T ss_pred             CCcee------ecCCCCCcceeecChHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------------
Confidence            21110      01123467889999999863      468889999999999999998 999997643            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                         .......+..+......   ...+.++.+||.+||..||++||++.++++
T Consensus       231 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         231 ---NTEVIECITQGRVLERP---RVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             ---HHHHHHHHhCCCCCCCC---ccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence               12244455554432221   346889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.97  E-value=2.2e-30  Score=255.71  Aligned_cols=249  Identities=23%  Similarity=0.298  Sum_probs=168.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|.+ .+.||+|+||.||+|.... +..+|+|++.+........+.+|+.+++.+ +||||+++++++.+....+   .|
T Consensus         7 ~y~~-~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---lv   80 (261)
T cd05148           7 EFTL-ERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVY---II   80 (261)
T ss_pred             HHHH-hhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeE---EE
Confidence            3554 5679999999999999877 888999999765443456788999999987 5999999999887654332   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-                 + +              .+...+..              ......+ ...++
T Consensus        81 ------~e~~~-----------------~-~--------------~L~~~~~~--------------~~~~~~~-~~~~~  107 (261)
T cd05148          81 ------TELME-----------------K-G--------------SLLAFLRS--------------PEGQVLP-VASLI  107 (261)
T ss_pred             ------Eeecc-----------------c-C--------------CHHHHHhc--------------CCCCCCC-HHHHH
Confidence                  11100                 0 0              00000000              0000000 00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .|..+   ++.++.|+|  ++||+||||||+|||++.   .+.+||+|||++....
T Consensus       108 ------------------------~~~~~---i~~al~~lH--~~~i~h~dl~~~nilv~~---~~~~kl~d~g~~~~~~  155 (261)
T cd05148         108 ------------------------DMACQ---VAEGMAYLE--EQNSIHRDLAARNILVGE---DLVCKVADFGLARLIK  155 (261)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--HCCeeccccCcceEEEcC---CceEEEccccchhhcC
Confidence                                    02333   667788888  999999999999999953   4569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ....        ......++..|+|||++..      ..++.++|+|||||++|+|++ |++||.+.+            
T Consensus       156 ~~~~--------~~~~~~~~~~~~~PE~~~~------~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~------------  209 (261)
T cd05148         156 EDVY--------LSSDKKIPYKWTAPEAASH------GTFSTKSDVWSFGILLYEMFTYGQVPYPGMN------------  209 (261)
T ss_pred             Cccc--------cccCCCCceEecCHHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcCC------------
Confidence            2211        0113346778999999853      457889999999999999998 899997643            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                         ...++..+..+ +..+.  ....++++.++|.+||..||++|||++++++
T Consensus       210 ---~~~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         210 ---NHEVYDQITAG-YRMPC--PAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             ---HHHHHHHHHhC-CcCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence               12344455433 22221  1367899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=2.5e-30  Score=261.69  Aligned_cols=269  Identities=22%  Similarity=0.274  Sum_probs=170.2

Q ss_pred             cchhcccCceeceeCceEEEEEEEc-------cCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNI-------LTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~-------~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      .+.|.+ ++.||+|+||.||+|+..       .++..||+|.+.... ......+.+|+.++..+.+||||+++++++..
T Consensus        14 ~~~~~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          14 RDKLTL-GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             HHHeee-cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            344554 578999999999999753       234579999986432 22345688999999987679999999998876


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|      +|.+--   +.     |     ...+..                .......-.+.+.       
T Consensus        93 ~~~~~---lv------~e~~~~---~~-----L-----~~~l~~----------------~~~~~~~~~~~~~-------  127 (304)
T cd05101          93 DGPLY---VI------VEYASK---GN-----L-----REYLRA----------------RRPPGMEYSYDIA-------  127 (304)
T ss_pred             CCceE---EE------EecCCC---Cc-----H-----HHHHHh----------------cCCcccccccccc-------
Confidence            54332   11      111100   00     0     000000                0000000000000       


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      ..   .....++..++.                  +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||
T Consensus       128 ~~---~~~~~~~~~~~~------------------~~~q---i~~al~~LH--~~givH~dlkp~Nili~---~~~~~kl  178 (304)
T cd05101         128 RV---PDEQMTFKDLVS------------------CTYQ---VARGMEYLA--SQKCIHRDLAARNVLVT---ENNVMKI  178 (304)
T ss_pred             cC---CcccccHHHHHH------------------HHHH---HHHHHHHHH--HCCeeecccccceEEEc---CCCcEEE
Confidence            00   000000100000                  2233   677888888  89999999999999994   3456999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGE  356 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~  356 (539)
                      +|||+++........      .......+++.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+  
T Consensus       179 ~D~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--  244 (304)
T cd05101         179 ADFGLARDVNNIDYY------KKTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--  244 (304)
T ss_pred             CCCccceeccccccc------ccccCCCCCceeeCchhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCcccCC--
Confidence            999998755322110      01123456788999999853      468899999999999999998 889997643  


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                   ...+...+..+.. ..+    ...+.++++||.+||..+|++||++.|+++.
T Consensus       245 -------------~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         245 -------------VEELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             -------------HHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence                         2335555554432 222    3678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=6.7e-30  Score=252.96  Aligned_cols=249  Identities=21%  Similarity=0.271  Sum_probs=164.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      ..|++ .+.||+|+||.||+|.+..+ ..||+|++.+.. ....++.+|++++..+ +||||+++++++..... +    
T Consensus         6 ~~~~~-~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~-~----   76 (262)
T cd05071           6 ESLRL-EVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSEEPI-Y----   76 (262)
T ss_pred             HHeeE-eeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhC-CCCCcceEEEEECCCCc-E----
Confidence            34665 46799999999999987655 459999996532 2346788999999987 59999999987643211 1    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      +.+|--+ +              .+...+..               ...      ..
T Consensus        77 l----------------------v~e~~~~-~--------------~L~~~~~~---------------~~~------~~   98 (262)
T cd05071          77 I----------------------VTEYMSK-G--------------SLLDFLKG---------------EMG------KY   98 (262)
T ss_pred             E----------------------EEEcCCC-C--------------cHHHHHhh---------------ccc------cC
Confidence            1                      1111000 0              00000000               000      00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ++...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus        99 ~~~~~~~------------------~~~~~---l~~aL~~lH--~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~  152 (262)
T cd05071          99 LRLPQLV------------------DMAAQ---IASGMAYVE--RMNYVHRDLRAANILVG---ENLVCKVADFGLARLI  152 (262)
T ss_pred             CCHHHHH------------------HHHHH---HHHHHHHHH--HCCccccccCcccEEEc---CCCcEEeccCCceeec
Confidence            0000000                  02333   667788888  99999999999999995   3456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......++..|+|||++..      ..|+.++|+||+||++|+|++ |.+||.+..           
T Consensus       153 ~~~~~~-------~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-----------  208 (262)
T cd05071         153 EDNEYT-------ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----------  208 (262)
T ss_pred             cccccc-------cccCCcccceecCHhHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----------
Confidence            322210       0113346778999998752      458899999999999999999 889997643           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          ...+...+..+. ..+.  -..++..+.+||.+||.+||++||++++++.
T Consensus       209 ----~~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         209 ----NREVLDQVERGY-RMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             ----hHHHHHHHhcCC-CCCC--ccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                122344444332 1221  1357899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=2.1e-30  Score=255.83  Aligned_cols=253  Identities=26%  Similarity=0.441  Sum_probs=168.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      |.+ .+.||+|+||.||++.+..++..+++|+++...     .....++.+|+.++..+ +||||+++++++.+....+ 
T Consensus         2 y~i-~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   78 (260)
T cd08222           2 YIL-QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFC-   78 (260)
T ss_pred             cee-eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceE-
Confidence            444 467999999999999998888878888775322     12233566788888886 6999999999886654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         ++                      .+|  ..+.             .+...+..  +     ..     .....+. 
T Consensus        79 ---lv----------------------~e~--~~~~-------------~l~~~~~~--~-----~~-----~~~~~~~-  105 (260)
T cd08222          79 ---II----------------------TEY--CEGR-------------DLDCKLEE--L-----KH-----TGKTLSE-  105 (260)
T ss_pred             ---EE----------------------EEe--CCCC-------------CHHHHHHH--H-----hh-----cccccCH-
Confidence               11                      111  0000             00000000  0     00     0000000 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                            .                  ....+..+   ++.++.|+|  ++||+||||||+||++..    +.+||+|||++
T Consensus       106 ------~------------------~~~~~~~~---l~~~l~~lH--~~~i~h~~l~~~nili~~----~~~~l~d~g~~  152 (260)
T cd08222         106 ------N------------------QVCEWFIQ---LLLGVHYMH--QRRILHRDLKAKNIFLKN----NLLKIGDFGVS  152 (260)
T ss_pred             ------H------------------HHHHHHHH---HHHHHHHHH--HcCccccCCChhheEeec----CCEeecccCce
Confidence                  0                  00013334   667777777  999999999999999942    35899999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........        ...+..|++.|+|||.+..      ..++.++|+||+||++|+|++|..||.+...        
T Consensus       153 ~~~~~~~~--------~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--------  210 (260)
T cd08222         153 RLLMGSCD--------LATTFTGTPYYMSPEALKH------QGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--------  210 (260)
T ss_pred             eecCCCcc--------cccCCCCCcCccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCccH--------
Confidence            65432211        1234578999999998752      4678899999999999999999999965421        


Q ss_pred             ccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        364 ETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                             ......+..+. +.++    ..++.++.+||.+||..||++||+++|+++||||
T Consensus       211 -------~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         211 -------LSVVLRIVEGPTPSLP----ETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             -------HHHHHHHHcCCCCCCc----chhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence                   12233343332 2222    3578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.6e-30  Score=253.66  Aligned_cols=248  Identities=21%  Similarity=0.254  Sum_probs=163.2

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |++ .+.||+|+||.||+|... ++..||||.+.... .....+.+|++++.++ +||||+++++++......+   .+ 
T Consensus         8 ~~~-~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv-   79 (261)
T cd05068           8 IQL-LRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIY---IV-   79 (261)
T ss_pred             eee-EEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHC-CCCCccceeEEEecCCCee---ee-
Confidence            444 478999999999999864 45679999986432 2356788999999997 4999999999886654322   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           .|.+-                 + +              .+...+..               . .  ....+.-.
T Consensus        80 -----~e~~~-----------------~-~--------------~L~~~~~~---------------~-~--~~~~~~~~  104 (261)
T cd05068          80 -----TELMK-----------------Y-G--------------SLLEYLQG---------------G-A--GRALKLPQ  104 (261)
T ss_pred             -----eeccc-----------------C-C--------------cHHHHHhc---------------c-C--CCCCCHHH
Confidence                 11100                 0 0              00000000               0 0  00000000


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      +.-                     +..+   ++.++.++|  ++||+||||||+|||+..   .+.+||+|||+++....
T Consensus       105 ~~~---------------------~~~~---i~~~l~~lH--~~~i~H~dl~p~Nil~~~---~~~~~l~dfg~~~~~~~  155 (261)
T cd05068         105 LID---------------------MAAQ---VASGMAYLE--AQNYIHRDLAARNVLVGE---NNICKVADFGLARVIKE  155 (261)
T ss_pred             HHH---------------------HHHH---HHHHHHHHH--hCCeeeccCCcceEEEcC---CCCEEECCcceEEEccC
Confidence            000                     2233   566777777  999999999999999954   45699999999875532


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....       ......++..|+|||++..      ..++.++|+|||||++|+|++ |++||.+.+             
T Consensus       156 ~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-------------  209 (261)
T cd05068         156 DIYE-------AREGAKFPIKWTAPEAALY------NRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-------------  209 (261)
T ss_pred             Cccc-------ccCCCcCceeccCcccccc------CCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-------------
Confidence            1110       0111223457999998853      468889999999999999999 999997653             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                        ...+...+... +..+..  ...+..+.+||.+||..||++||+++++++
T Consensus       210 --~~~~~~~~~~~-~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         210 --NAEVLQQVDQG-YRMPCP--PGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             --HHHHHHHHHcC-CCCCCC--CcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence              12344444433 222211  357899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=2.6e-30  Score=254.58  Aligned_cols=246  Identities=19%  Similarity=0.255  Sum_probs=164.0

Q ss_pred             ceeceeCceEEEEEEEcc-CC--cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         54 EILGKGAYASVQTCVNIL-TE--LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~-t~--~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ++||+|+||.||+|.... .+  ..||||.+..... .....+.+|+.++.++ +||||+++++++.+ ...+    +  
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~----~--   72 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLM----M--   72 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEE----E--
Confidence            368999999999998765 33  3699999976443 3456788999999997 59999999988765 2111    1  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC--CcccccccccccCCCCCCCCcccchh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA--EFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~--~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                          +.++.-+ +              .+...+...  ....                 ...+|
T Consensus        73 --------------------v~e~~~~-~--------------~L~~~l~~~~~~~~~-----------------~~~~~  100 (257)
T cd05040          73 --------------------VTELAPL-G--------------SLLDRLRKDALGHFL-----------------ISTLC  100 (257)
T ss_pred             --------------------EEEecCC-C--------------cHHHHHHhcccccCc-----------------HHHHH
Confidence                                1111000 0              000000000  0000                 00111


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      .                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++..+.
T Consensus       101 ~------------------------~~~q---i~~~L~~lH--~~~i~H~di~p~nil~~~---~~~~kl~dfg~~~~~~  148 (257)
T cd05040         101 D------------------------YAVQ---IANGMRYLE--SKRFIHRDLAARNILLAS---DDKVKIGDFGLMRALP  148 (257)
T ss_pred             H------------------------HHHH---HHHHHHHHH--hCCccccccCcccEEEec---CCEEEecccccccccc
Confidence            1                        2233   667788888  999999999999999954   3679999999987654


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .......     ......++..|+|||.+..      ..|+.++|+||+||++|+|++ |.+||.+.+.           
T Consensus       149 ~~~~~~~-----~~~~~~~~~~y~~pE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----------  206 (257)
T cd05040         149 QNEDHYV-----MEEHLKVPFAWCAPESLRT------RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG-----------  206 (257)
T ss_pred             cccccee-----cccCCCCCceecCHHHhcc------cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----------
Confidence            3221110     1113467889999999863      468889999999999999998 9999965431           


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          ..+...+......++..  ..++.++.+||.+||..||++||+++++++
T Consensus       207 ----~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         207 ----SQILKKIDKEGERLERP--EACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             ----HHHHHHHHhcCCcCCCC--ccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence                22334443322222211  246889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=8.9e-30  Score=267.25  Aligned_cols=147  Identities=22%  Similarity=0.372  Sum_probs=109.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++.........      ...+.+||+.|+|||++.. 
T Consensus       248 i~~aL~~LH--~~~ivHrdlkp~NiLl~~---~~~~kL~DfGla~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-  315 (401)
T cd05107         248 VANGMEFLA--SKNCVHRDLAARNVLICE---GKLVKICDFGLARDIMRDSNYI------SKGSTFLPLKWMAPESIFN-  315 (401)
T ss_pred             HHHHHHHHh--cCCcCcccCCcceEEEeC---CCEEEEEecCcceecccccccc------cCCCcCCCCceeChHHhcC-
Confidence            567778888  999999999999999953   4569999999987532211100      1123467899999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                           ..|+.++|+||+||++|+|++ |..||.....              .+.....+..+ ..++.  +..++.++.+
T Consensus       316 -----~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~--------------~~~~~~~~~~~-~~~~~--p~~~~~~l~~  373 (401)
T cd05107         316 -----NLYTTLSDVWSFGILLWEIFTLGGTPYPELPM--------------NEQFYNAIKRG-YRMAK--PAHASDEIYE  373 (401)
T ss_pred             -----CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc--------------hHHHHHHHHcC-CCCCC--CCCCCHHHHH
Confidence                 457889999999999999998 8999975421              12233444443 22221  2357899999


Q ss_pred             HHHHhccccccCCCCHHHHhcC
Q psy16343        399 LIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ||.+|+..||.+||+++++++.
T Consensus       374 li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         374 IMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHcCCChhHCcCHHHHHHH
Confidence            9999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0670|consensus

Probab=99.97  E-value=3e-32  Score=274.68  Aligned_cols=271  Identities=24%  Similarity=0.349  Sum_probs=166.9

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcC-----CCCeeeeeeeecccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG-----HPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~-----HpnIv~l~~~~~~~~~~~~  123 (539)
                      |.+. ...|+|-||.|..|.+...|..||||||.+... ..+.=++|+++|.++..     --++++|+..|......+ 
T Consensus       434 Y~V~-~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC-  510 (752)
T KOG0670|consen  434 YEVQ-GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC-  510 (752)
T ss_pred             eEEE-eccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE-
Confidence            4443 357999999999999999999999999965322 22334689999998752     235666665554332222 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      .|++-+.                                 |           -|++..+    +...+  
T Consensus       511 --lV------FE~LslN---------------------------------L-----------RevLKKy----G~nvG--  532 (752)
T KOG0670|consen  511 --LV------FEPLSLN---------------------------------L-----------REVLKKY----GRNVG--  532 (752)
T ss_pred             --EE------ehhhhch---------------------------------H-----------HHHHHHh----Ccccc--
Confidence              11      2222110                                 0           0001000    00000  


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      --+.++-.                     |..|   +..|+.++-  ..||+|.||||+|||+...  ...+||||||-|
T Consensus       533 L~ikaVRs---------------------YaqQ---LflALklLK--~c~vlHaDIKPDNiLVNE~--k~iLKLCDfGSA  584 (752)
T KOG0670|consen  533 LHIKAVRS---------------------YAQQ---LFLALKLLK--KCGVLHADIKPDNILVNES--KNILKLCDFGSA  584 (752)
T ss_pred             eeehHHHH---------------------HHHH---HHHHHHHHH--hcCeeecccCccceEeccC--cceeeeccCccc
Confidence            00111111                     1122   344444444  9999999999999999643  346899999988


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .....+.          ++.+.-+..|.|||++.+      -.|+...|+||+||.||+|.+|+..|.|.+..+.+....
T Consensus       585 ~~~~ene----------itPYLVSRFYRaPEIiLG------~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m  648 (752)
T KOG0670|consen  585 SFASENE----------ITPYLVSRFYRAPEIILG------LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM  648 (752)
T ss_pred             ccccccc----------ccHHHHHHhccCcceeec------CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence            7554332          334567889999999985      479999999999999999999999999987543211100


Q ss_pred             ccchhhHHHHH------------------------------------------HHHhcCCCCCCCCCCCCCCHHHHHHHH
Q psy16343        364 ETCHACQEILF------------------------------------------HSIQQGHYDFPEGEWSTISDEAKDLIR  401 (539)
Q Consensus       364 ~~~~~~~~~~~------------------------------------------~~i~~~~~~~p~~~~~~~s~~~~dli~  401 (539)
                      +..+..+..++                                          .....+...+|... ..+-.+++|||.
T Consensus       649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq-~~~~~~~rdLLd  727 (752)
T KOG0670|consen  649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQ-PKIVQQLRDLLD  727 (752)
T ss_pred             HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchh-HHHHHHHHHHHH
Confidence            00000000000                                          00011111122211 123367899999


Q ss_pred             HhccccccCCCCHHHHhcCCCccC
Q psy16343        402 RLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       402 ~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      +||..||++|+|+.|+|+||||+.
T Consensus       728 kml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  728 KMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             HHhccChhhcCCHHHHhcCCcccC
Confidence            999999999999999999999974

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=4.8e-30  Score=263.37  Aligned_cols=267  Identities=22%  Similarity=0.297  Sum_probs=167.7

Q ss_pred             hhcccCceeceeCceEEEEEEEccC-------CcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILT-------ELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t-------~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .|.+ ++.||+|+||.||+|.+...       +..||+|++.... ......+.+|++++.++.+||||+++++++....
T Consensus        13 ~~~i-~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          13 RLTL-GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             Heee-cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            3554 67899999999999986432       2368999886432 2234568899999998867999999999887654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .+      .|.+-    +.    .|.+     .+.....    ......+..+.     -||          . 
T Consensus        92 ~~~---lv------~e~~~----~g----~L~~-----~l~~~~~----~~~~~~~~~~~-----~~~----------~-  129 (334)
T cd05100          92 PLY---VL------VEYAS----KG----NLRE-----YLRARRP----PGMDYSFDTCK-----LPE----------E-  129 (334)
T ss_pred             ceE---EE------EecCC----CC----cHHH-----HHHhcCC----ccccccccccc-----Ccc----------c-
Confidence            322   11      11100    00    0000     0000000    00000000000     000          0 


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                            ..++..++.                  +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       130 ------~l~~~~~~~------------------~~~q---i~~al~~LH--~~givH~dlkp~Nill~---~~~~~kL~D  177 (334)
T cd05100         130 ------QLTFKDLVS------------------CAYQ---VARGMEYLA--SQKCIHRDLAARNVLVT---EDNVMKIAD  177 (334)
T ss_pred             ------cCCHHHHHH------------------HHHH---HHHHHHHHH--HCCeeccccccceEEEc---CCCcEEECC
Confidence                  000000000                  2223   667788888  99999999999999995   345699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+++.........      ......++..|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+    
T Consensus       178 fg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~----  241 (334)
T cd05100         178 FGLARDVHNIDYYK------KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP----  241 (334)
T ss_pred             cccceecccccccc------cccCCCcCceEcCHHHhcc------CCcCchhhhHHHHHHHHHHHhcCCCCCCCCC----
Confidence            99987543211100      1112344678999999863      468889999999999999998 899997653    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 .+.++..+..+.. ..+    ...+.++.+||.+||..+|.+||++.|++++
T Consensus       242 -----------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         242 -----------VEELFKLLKEGHRMDKP----ANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             -----------HHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                       2334555554322 222    3578899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.97  E-value=7.2e-30  Score=252.13  Aligned_cols=243  Identities=22%  Similarity=0.361  Sum_probs=159.3

Q ss_pred             eceeCceEEEEEEEc--cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         56 LGKGAYASVQTCVNI--LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        56 LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ||+|+||.||+|...  .++..||+|++..... .....+.+|+.+++.+ +||||++++++++....            
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~------------   69 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEAEAL------------   69 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcCCCe------------
Confidence            899999999999765  4456799999864322 2235678999999997 69999999998754311            


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                          .+           +.+|  ..+.             .+...           +..    .....       +...+
T Consensus        70 ----~l-----------v~e~--~~~~-------------~L~~~-----------l~~----~~~~~-------~~~~~   97 (257)
T cd05115          70 ----ML-----------VMEM--ASGG-------------PLNKF-----------LSG----KKDEI-------TVSNV   97 (257)
T ss_pred             ----EE-----------EEEe--CCCC-------------CHHHH-----------HHh----CCCCC-------CHHHH
Confidence                11           1111  0000             00000           000    00000       00000


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                      +                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.........
T Consensus        98 ~------------------~~~~~---i~~~l~~lH--~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~~~~~~~~  151 (257)
T cd05115          98 V------------------ELMHQ---VSMGMKYLE--GKNFVHRDLAARNVLLV---NQHYAKISDFGLSKALGADDSY  151 (257)
T ss_pred             H------------------HHHHH---HHHHHHHHH--hcCeeecccchheEEEc---CCCcEEeccCCccccccCCccc
Confidence            0                  02233   667778887  89999999999999994   3456999999998754322211


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                      ..     ......+++.|+|||++..      ..++.++|+|||||++|+|++ |.+||.+...               .
T Consensus       152 ~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---------------~  205 (257)
T cd05115         152 YK-----ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG---------------P  205 (257)
T ss_pred             ee-----ccCCCCCCcccCCHHHHcc------CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH---------------H
Confidence            00     0111234678999999863      458889999999999999996 9999976431               2


Q ss_pred             HHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        372 ILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       372 ~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .....+..+. ..+|    ...++++++||.+||..||++||+++++++
T Consensus       206 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         206 EVMSFIEQGKRLDCP----AECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             HHHHHHHCCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            2344454443 3333    356899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=1e-29  Score=252.26  Aligned_cols=258  Identities=18%  Similarity=0.185  Sum_probs=160.8

Q ss_pred             eeceeCceEEEEEEEcc--CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         55 ILGKGAYASVQTCVNIL--TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~--t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .||+|+||.||+|....  ....+|+|.+..... .....+.+|++++..+ +||||+++++++.+....+   .|    
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~---lv----   73 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYL---LV----   73 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceE---EE----
Confidence            58999999999996433  345688887753221 2234577899998886 6999999999887654322   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                        +|.+-                 + +              .+...+..           .    ........+ +..  
T Consensus        74 --~e~~~-----------------~-g--------------~L~~~l~~-----------~----~~~~~~~~~-~~~--  101 (269)
T cd05042          74 --LEFCP-----------------L-G--------------DLKNYLRS-----------N----RGMVAQMAQ-KDV--  101 (269)
T ss_pred             --EEeCC-----------------C-C--------------cHHHHHHh-----------c----ccccccccc-HHH--
Confidence              11110                 0 0              00000000           0    000000000 000  


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                       +.                 .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++........
T Consensus       102 -~~-----------------~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~~  155 (269)
T cd05042         102 -LQ-----------------RMACE---VASGLLWLH--QADFIHSDLALRNCQLT---ADLSVKIGDYGLALEQYPEDY  155 (269)
T ss_pred             -HH-----------------HHHHH---HHHHHHHHH--hcCEecccccHhheEec---CCCcEEEeccccccccccchh
Confidence             00                 03334   677888888  99999999999999994   445699999999864322111


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCC-CCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMG-PEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~-~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..      ......+++.|+|||++..... .....++.++||||+||++|+|++ |.+||.....              
T Consensus       156 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------------  215 (269)
T cd05042         156 YI------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--------------  215 (269)
T ss_pred             ee------ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--------------
Confidence            00      0123356788999999853110 012357789999999999999999 7889865421              


Q ss_pred             HHHHHHHHhcCCCCCCCCCC-CCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        370 QEILFHSIQQGHYDFPEGEW-STISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~-~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+.+...+..+...++...+ ..++...++++..|+ .||++|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         216 EQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            22333445555555554322 357888999999988 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=5.6e-30  Score=253.73  Aligned_cols=250  Identities=20%  Similarity=0.298  Sum_probs=166.1

Q ss_pred             hcccCceeceeCceEEEEEEEccC---CcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILT---ELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |.+ .+.||+|+||+||+|....+   ...||||+++.... .....+.+|+.++..+ +||||+++++++......+  
T Consensus         6 ~~~-~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~--   81 (266)
T cd05033           6 VTI-EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPVM--   81 (266)
T ss_pred             cee-eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCceE--
Confidence            443 57899999999999988654   45799999864322 2345678899999887 5999999999886543322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        +                      +.+|--+ +              .+...+.. ...+..+                
T Consensus        82 --i----------------------v~e~~~~-~--------------~L~~~~~~~~~~~~~~----------------  106 (266)
T cd05033          82 --I----------------------ITEYMEN-G--------------SLDKFLRENDGKFTVG----------------  106 (266)
T ss_pred             --E----------------------EEEcCCC-C--------------CHHHHHHhccCCCCHH----------------
Confidence              1                      1111000 0              00000000 0000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++       .                 +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       107 -~~~-------~-----------------~~~~---l~~~l~~Lh--~~~i~H~di~p~nili~---~~~~~~l~dfg~~  153 (266)
T cd05033         107 -QLV-------G-----------------MLRG---IASGMKYLS--EMNYVHRDLAARNILVN---SNLVCKVSDFGLS  153 (266)
T ss_pred             -HHH-------H-----------------HHHH---HHHHHHHHH--hCCcccCCCCcceEEEc---CCCCEEECccchh
Confidence             000       0                 2233   667778888  99999999999999994   3456899999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      ..........      ......+++.|+|||.+..      ..++.++|+|||||++|+|++ |..||....        
T Consensus       154 ~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~------~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--------  213 (266)
T cd05033         154 RRLEDSEATY------TTKGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSYGERPYWDMS--------  213 (266)
T ss_pred             hcccccccce------eccCCCCCccccChhhhcc------CCCccccchHHHHHHHHHHHccCCCCCCCCC--------
Confidence            8654111100      0112345678999999863      468889999999999999997 999996532        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ...+...+..+. ..|..  ...+..+.+||.+||..||++||+++|++++
T Consensus       214 -------~~~~~~~~~~~~-~~~~~--~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         214 -------NQDVIKAVEDGY-RLPPP--MDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             -------HHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                   223445555432 22221  3578999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.8e-30  Score=251.73  Aligned_cols=245  Identities=22%  Similarity=0.294  Sum_probs=162.2

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ++||+|+||.||+|.+.. ++.||+|++...... ....+.+|+++++++ +||||+++++++.+....+   .+     
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---~v-----   70 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIY---IV-----   70 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeE---EE-----
Confidence            368999999999999877 899999998654322 345688899999986 5999999999887654322   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                                        .++--+ +              .+...           +..    ....    .+   ...+
T Consensus        71 ------------------~e~~~~-~--------------~l~~~-----------l~~----~~~~----~~---~~~~   95 (251)
T cd05041          71 ------------------MELVPG-G--------------SLLTF-----------LRK----KKNR----LT---VKKL   95 (251)
T ss_pred             ------------------EEcCCC-C--------------cHHHH-----------HHh----cCCC----CC---HHHH
Confidence                              111000 0              00000           000    0000    00   0000


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                      + .                 +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.........
T Consensus        96 ~-~-----------------~~~~---~~~~l~~lH--~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~~~  149 (251)
T cd05041          96 L-Q-----------------MSLD---AAAGMEYLE--SKNCIHRDLAARNCLVG---ENNVLKISDFGMSREEEGGIYT  149 (251)
T ss_pred             H-H-----------------HHHH---HHHHHHHHH--hCCEehhhcCcceEEEc---CCCcEEEeeccccccccCCcce
Confidence            0 0                 2222   556777888  99999999999999994   4456999999998754311100


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                      .      ......++..|+|||++.+      ..++.++|+|||||++|+|++ |.+||.+...               .
T Consensus       150 ~------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~---------------~  202 (251)
T cd05041         150 V------SDGLKQIPIKWTAPEALNY------GRYTSESDVWSYGILLWETFSLGDTPYPGMSN---------------Q  202 (251)
T ss_pred             e------ccccCcceeccCChHhhcc------CCCCcchhHHHHHHHHHHHHhccCCCCccCCH---------------H
Confidence            0      0012234667999999853      458889999999999999998 8899976431               2


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .....+..+ ..++.  ...++.++.+||.+||..||++|||++|+++
T Consensus       203 ~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         203 QTRERIESG-YRMPA--PQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             HHHHHHhcC-CCCCC--CccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            233344332 22221  2357899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=1.1e-29  Score=254.79  Aligned_cols=271  Identities=20%  Similarity=0.222  Sum_probs=166.6

Q ss_pred             hhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|++ .+.||+|+||.||+|.+.     .++..||+|++..... .....+.+|++++.++ +||||+++++++.++...
T Consensus         6 ~~~~-~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           6 NIEY-VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hcee-cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCcc
Confidence            3444 357899999999999874     3677899999864322 2235678899999987 699999999998776533


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .+      .|.+-    +.    .+     ...+.......      ......++..      ..       ....
T Consensus        84 ~---lv------~e~~~----~~----~L-----~~~l~~~~~~~------~~~~~~~~~~------~~-------~~~~  122 (288)
T cd05050          84 C---LL------FEYMA----YG----DL-----NEFLRHRSPRA------QCSLSHSTSS------AR-------KCGL  122 (288)
T ss_pred             E---EE------EecCC----CC----CH-----HHHHHHcCccc------cccccccccc------cc-------cccc
Confidence            2   11      11000    00    00     00000000000      0000000000      00       0000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                      ... -.....+                  ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       123 ~~~-~l~~~~~------------------~~~~~~---i~~aL~~lH--~~~i~H~dl~p~nil~~---~~~~~~l~dfg  175 (288)
T cd05050         123 NPL-PLSCTEQ------------------LCIAKQ---VAAGMAYLS--ERKFVHRDLATRNCLVG---ENMVVKIADFG  175 (288)
T ss_pred             ccc-ccCHHHH------------------HHHHHH---HHHHHHHHH--hCCeecccccHhheEec---CCCceEECccc
Confidence            000 0000000                  013333   667777777  99999999999999994   44569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      ++..........      ......+++.|+|||++..      ..|+.++|+|||||++|+|++ |..||.+.+      
T Consensus       176 ~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~~~~~p~~~~~------  237 (288)
T cd05050         176 LSRNIYSADYYK------ASENDAIPIRWMPPESIFY------NRYTTESDVWAYGVVLWEIFSYGMQPYYGMA------  237 (288)
T ss_pred             cceecccCcccc------ccCCCccChhhcCHHHHhc------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence            987542211100      0112345678999999863      468899999999999999997 888997643      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCC-CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        361 QRGETCHACQEILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~-~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                               .+.....+..+... .|    ..++.++.+||.+||..||++|||++|+++
T Consensus       238 ---------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         238 ---------HEEVIYYVRDGNVLSCP----DNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             ---------HHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                     23344555555432 22    257899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=3.7e-30  Score=252.76  Aligned_cols=250  Identities=27%  Similarity=0.385  Sum_probs=171.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||++.+..+++.+|+|.+.+..  ......+.+|+++++.+. ||||+++++++.+....+   .|   
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~---~v---   77 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLC---IV---   77 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEE---EE---
Confidence            467999999999999999999999999986532  223446778999999874 999999998887653322   11   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                         .|                 +  ..+.             .+..      |+... ..     ...... ...+|.  
T Consensus        78 ---~e-----------------~--~~~~-------------~L~~------~~~~~-~~-----~~~~~~-~~~~~~--  107 (256)
T cd08530          78 ---ME-----------------Y--APFG-------------DLSK------AISKR-KK-----KRKLIP-EQEIWR--  107 (256)
T ss_pred             ---eh-----------------h--cCCC-------------CHHH------HHHHH-Hh-----hcCCCC-HHHHHH--
Confidence               11                 0  0000             0000      00000 00     000000 000110  


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                            +..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++...... 
T Consensus       108 ----------------------~~~~---l~~al~~lh--~~~i~h~~l~~~ni~~~~---~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530         108 ----------------------IFIQ---LLRGLQALH--EQKILHRDLKSANILLVA---NDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             ----------------------HHHH---HHHHHHHHh--hCCcccCCCCcceEEEec---CCcEEEeeccchhhhccC-
Confidence                                  2223   667788888  999999999999999964   456999999998754322 


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                               ......|++.|+|||.+..      ..++.++|+||+|+++|+|++|+.||...+               .
T Consensus       157 ---------~~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~~---------------~  206 (256)
T cd08530         157 ---------MAKTQIGTPHYMAPEVWKG------RPYSYKSDIWSLGCLLYEMATFAPPFEARS---------------M  206 (256)
T ss_pred             ---------CcccccCCccccCHHHHCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------------H
Confidence                     1123568999999999863      457889999999999999999999997643               1


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      +.+...+..+.+.-..   ..++.+++++|.+||..||++||++.++++||++
T Consensus       207 ~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         207 QDLRYKVQRGKYPPIP---PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHHHhcCCCCCCc---hhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            2234444444332111   2578999999999999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=1.2e-29  Score=248.59  Aligned_cols=250  Identities=28%  Similarity=0.420  Sum_probs=171.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc--cccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE--NHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~--~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|.+..++..|++|++.....  .....+.+|++++.++ +||||+++++.+.+..  ..+    + 
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~----l-   78 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLN----I-   78 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEE----E-
Confidence            4689999999999999999999999999865432  2345778899999997 5999999998886652  111    0 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                           +.++.-+ +              .+...+..                ....+ ..++|.
T Consensus        79 ---------------------v~e~~~~-~--------------~L~~~~~~----------------~~~~~-~~~~~~  105 (260)
T cd06606          79 ---------------------FLEYVSG-G--------------SLSSLLKK----------------FGKLP-EPVIRK  105 (260)
T ss_pred             ---------------------EEEecCC-C--------------cHHHHHHH----------------cCCCC-HHHHHH
Confidence                                 1111000 0              00000000                00000 001111


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                              +..+   ++.++.|+|  ++|++|+||+|+||++..   .+.+||+|||++.....
T Consensus       106 ------------------------~~~~---l~~~l~~lh--~~~~~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~~  153 (260)
T cd06606         106 ------------------------YTRQ---ILEGLAYLH--SNGIVHRDIKGANILVDS---DGVVKLADFGCAKRLGD  153 (260)
T ss_pred             ------------------------HHHH---HHHHHHHHH--HCCccccCCCHHHEEEcC---CCCEEEcccccEEeccc
Confidence                                    2233   566777777  899999999999999954   45699999999875543


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ....      .......++..|+|||.+..      ..++.++|+||+||++|+|++|..||.....             
T Consensus       154 ~~~~------~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-------------  208 (260)
T cd06606         154 IETG------EGTGSVRGTPYWMAPEVIRG------EEYGRAADIWSLGCTVIEMATGKPPWSELGN-------------  208 (260)
T ss_pred             cccc------ccccCCCCCccccCHhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------------
Confidence            2210      01234578999999999863      3478899999999999999999999976531             


Q ss_pred             hHHHHHHHHhc--CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        369 CQEILFHSIQQ--GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       369 ~~~~~~~~i~~--~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                       .......+..  ....+|    ..++.++++||.+||..||++||++.|+++||||
T Consensus       209 -~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         209 -PMAALYKIGSSGEPPEIP----EHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             -hHHHHHhccccCCCcCCC----cccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence             1112222221  122233    3568999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=6.3e-30  Score=252.28  Aligned_cols=247  Identities=18%  Similarity=0.254  Sum_probs=164.9

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |.+ .+.||+|+||.||++.... +..+|||.+.... .....+.+|+.++..+ +||||+++++++......+    + 
T Consensus         6 ~~~-~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~----l-   76 (256)
T cd05113           6 LTF-LKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS-MSEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIY----I-   76 (256)
T ss_pred             eEE-eeEecCcccceEEEEEecC-CCcEEEEEcCCCc-ccHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcE----E-
Confidence            444 3579999999999997643 4569999986432 3356788999999987 5999999999886543221    1 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccchh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                           +.+|--+ +              .+...+.. ...+..+                 .+|
T Consensus        77 ---------------------v~e~~~~-~--------------~l~~~i~~~~~~~~~~-----------------~~~  103 (256)
T cd05113          77 ---------------------VTEYMSN-G--------------CLLNYLREHGKRFQPS-----------------QLL  103 (256)
T ss_pred             ---------------------EEEcCCC-C--------------cHHHHHHhcCCCCCHH-----------------HHH
Confidence                                 1111000 0              00000000 0000000                 000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++...
T Consensus       104 ------------------------~~~~~---i~~~l~~lH--~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~~~  151 (256)
T cd05113         104 ------------------------EMCKD---VCEGMAYLE--SKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRYVL  151 (256)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--hCCeeccccCcceEEEc---CCCCEEECCCccceecC
Confidence                                    03333   677788888  99999999999999995   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....       ......++..|+|||++..      ..|+.++|+|||||++|+|++ |..||...+            
T Consensus       152 ~~~~~-------~~~~~~~~~~y~~pe~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------------  206 (256)
T cd05113         152 DDEYT-------SSVGSKFPVRWSPPEVLLY------SKFSSKSDVWAFGVLMWEVYSLGKMPYERFN------------  206 (256)
T ss_pred             CCcee-------ecCCCccChhhCCHHHHhc------CcccchhHHHHHHHHHHHHhcCCCCCcCcCC------------
Confidence            22110       0011235678999999863      458889999999999999998 999997543            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...+...+..+......   ...+.++++||.+||..||.+||++.+++.+
T Consensus       207 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         207 ---NSETVEKVSQGLRLYRP---HLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             ---HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence               12344555555433222   2468999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=1.9e-29  Score=250.54  Aligned_cols=258  Identities=19%  Similarity=0.194  Sum_probs=160.2

Q ss_pred             eeceeCceEEEEEEEc--cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         55 ILGKGAYASVQTCVNI--LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .||+|+||.||+|...  .++..+|+|.++.... .....+.+|+.++..+ +||||+++++++.+....+   .|    
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv----   73 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYL---LV----   73 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcE---EE----
Confidence            5899999999999754  3556799998864332 2234678899999987 5999999999886543322   11    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                        +|.+-                 + +              .+...+           .....  ....  .   +....
T Consensus        74 --~e~~~-----------------~-g--------------~L~~~l-----------~~~~~--~~~~--~---~~~~~  101 (269)
T cd05087          74 --MEFCP-----------------L-G--------------DLKGYL-----------RSCRK--AELM--T---PDPTT  101 (269)
T ss_pred             --EECCC-----------------C-C--------------cHHHHH-----------HHhhh--cccc--c---ccHHH
Confidence              11110                 0 0              000000           00000  0000  0   00000


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                      +.                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++........
T Consensus       102 ~~------------------~~~~q---i~~al~~lH--~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~~  155 (269)
T cd05087         102 LQ------------------RMACE---IALGLLHLH--KNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKEDY  155 (269)
T ss_pred             HH------------------HHHHH---HHHHHHHHH--HCCEeccccCcceEEEc---CCCcEEECCccccccccCcce
Confidence            00                  02223   667777887  99999999999999995   345699999999864322111


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCC-CCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-EASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~-~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..      .....+|++.|+|||++....+. ....++.++|+||+||++|+|++ |.+||.....              
T Consensus       156 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--------------  215 (269)
T cd05087         156 YV------TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSD--------------  215 (269)
T ss_pred             ee------cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCCh--------------
Confidence            00      11235688899999998631110 01246789999999999999996 9999965421              


Q ss_pred             HHHHHHHHhcCCCCCCCCCC-CCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        370 QEILFHSIQQGHYDFPEGEW-STISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~-~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+.....+......++.+.. ...++..++++++|+ .||++|||++|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         216 EQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            12222233333344443322 246788999999998 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.1e-29  Score=250.23  Aligned_cols=243  Identities=19%  Similarity=0.254  Sum_probs=161.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||+|.+. ++..+|+|++.+.. .....+.+|++++..+ +||||+++++++......+   .|     
T Consensus         9 ~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---lv-----   77 (256)
T cd05059           9 LKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIF---IV-----   77 (256)
T ss_pred             hhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceE---EE-----
Confidence            467999999999999875 46679999986432 2345688899999987 5999999999886554322   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                       .|.+-                 + +              .+...+-. .... ++.                   .   
T Consensus        78 -~e~~~-----------------~-~--------------~L~~~l~~~~~~~-~~~-------------------~---  101 (256)
T cd05059          78 -TEYMA-----------------N-G--------------CLLNYLRERKGKL-GTE-------------------W---  101 (256)
T ss_pred             -EecCC-----------------C-C--------------CHHHHHHhcccCC-CHH-------------------H---
Confidence             11100                 0 0              00000000 0000 000                   0   


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                        ...+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||+++.......
T Consensus       102 ------------------~~~i~~q---i~~~l~~lH--~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~~~~~~~  155 (256)
T cd05059         102 ------------------LLDMCSD---VCEAMEYLE--SNGFIHRDLAARNCLVG---EDNVVKVSDFGLARYVLDDQY  155 (256)
T ss_pred             ------------------HHHHHHH---HHHHHHHHH--HCCcccccccHhhEEEC---CCCcEEECCcccceecccccc
Confidence                              0002333   667777888  99999999999999995   445699999999875422110


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                       .      ......++..|+|||++..      ..|+.++|+||+||++|+|++ |.+||.+.+.               
T Consensus       156 -~------~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------------  207 (256)
T cd05059         156 -T------SSQGTKFPVKWAPPEVFDY------SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---------------  207 (256)
T ss_pred             -c------ccCCCCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---------------
Confidence             0      0011223457999999863      468889999999999999998 8999976431               


Q ss_pred             HHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        371 EILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       371 ~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ......+..+ ....|    ...+.++.+||.+||..+|++|||+.|+++.
T Consensus       208 ~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         208 SEVVESVSAGYRLYRP----KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            2233444433 12222    3578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=8.9e-30  Score=253.01  Aligned_cols=258  Identities=20%  Similarity=0.299  Sum_probs=164.5

Q ss_pred             CceeceeCceEEEEEEEcc---CCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNIL---TELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~---t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .++||+|+||.||+|....   +++.||||++.....  ....++.+|++++..+ +||||+++++++......... . 
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~-~-   80 (273)
T cd05074           4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGRL-P-   80 (273)
T ss_pred             hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCcc-c-
Confidence            4679999999999998643   578999999864321  2245678899999987 599999999987654321100 0 


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                               +.         .-+.+|.-+....  ..        ...+..+...+.                      +
T Consensus        81 ---------~~---------~~~~~~~~~~~l~--~~--------~~~~~~~~~~~~----------------------l  110 (273)
T cd05074          81 ---------IP---------MVILPFMKHGDLH--TF--------LLMSRIGEEPFT----------------------L  110 (273)
T ss_pred             ---------ce---------EEEEecCCCCcHH--HH--------HHHhcccCCCCC----------------------C
Confidence                     00         0111111000000  00        000000000000                      0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +.-                  ....+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++...
T Consensus       111 ~~~------------------~~~~~~~~---i~~~l~~lH--~~~i~H~dikp~nili~---~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         111 PLQ------------------TLVRFMID---IASGMEYLS--SKNFIHRDLAARNCMLN---ENMTVCVADFGLSKKIY  164 (273)
T ss_pred             CHH------------------HHHHHHHH---HHHHHHHHH--hCCEeecccchhhEEEc---CCCCEEECccccccccc
Confidence            000                  00012333   667777887  99999999999999994   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......      ......+++.|++||.+..      ..++.++|+|||||++|+|++ |.+||.+.+            
T Consensus       165 ~~~~~~------~~~~~~~~~~~~~pe~~~~------~~~~~~sDi~slG~il~el~~~g~~p~~~~~------------  220 (273)
T cd05074         165 SGDYYR------QGCASKLPVKWLALESLAD------NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE------------  220 (273)
T ss_pred             CCccee------cCCCccCchhhcCHhHHhc------CccchhhhhHHHHHHHHHHhhCCCCCCCCCC------------
Confidence            222110      1123356788999999853      467889999999999999999 899997643            


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...++..+..+. ...+    ...+.++.+|+.+||..+|++||++.+++++
T Consensus       221 ---~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         221 ---NSEIYNYLIKGNRLKQP----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             ---HHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               123444444432 2222    2467899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.2e-29  Score=249.86  Aligned_cols=240  Identities=19%  Similarity=0.312  Sum_probs=162.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |++ .+.||+|+||.||+|..  .|+.||||.+..... ...++.+|+.++..+ +|+||+++++++.+....+    + 
T Consensus         8 ~~~-~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~----~-   77 (256)
T cd05039           8 LKL-GATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLY----I-   77 (256)
T ss_pred             ccc-eeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeE----E-
Confidence            443 56899999999999976  478899999965433 456788999999997 5999999999887643221    1 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC--CcccccccccccCCCCCCCCcccch
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA--EFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~--~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                                           +.+|--+ +              .+...+...  .....+                 . 
T Consensus        78 ---------------------v~e~~~~-~--------------~L~~~~~~~~~~~~~~~-----------------~-  103 (256)
T cd05039          78 ---------------------VTEYMAK-G--------------SLVDYLRSRGRAVITLA-----------------Q-  103 (256)
T ss_pred             ---------------------EEEecCC-C--------------cHHHHHHhcCCCCCCHH-----------------H-
Confidence                                 1111000 0              000000000  000000                 0 


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                             ...+..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||+++..
T Consensus       104 -----------------------~~~~~~q---i~~~l~~lh--~~~i~H~di~p~Nili~---~~~~~~l~d~g~~~~~  152 (256)
T cd05039         104 -----------------------QLGFALD---VCEGMEYLE--EKNFVHRDLAARNVLVS---EDLVAKVSDFGLAKEA  152 (256)
T ss_pred             -----------------------HHHHHHH---HHHHHHHHH--hCCccchhcccceEEEe---CCCCEEEccccccccc
Confidence                                   0013333   666777777  99999999999999994   4456899999998755


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ....           ....++..|+|||.+..      ..++.++|+|||||++|+|++ |..||...+           
T Consensus       153 ~~~~-----------~~~~~~~~~~ape~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------  204 (256)
T cd05039         153 SQGQ-----------DSGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----------  204 (256)
T ss_pred             cccc-----------ccCCCcccccCchhhcC------CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----------
Confidence            2211           12234567999998852      357889999999999999997 999997542           


Q ss_pred             chhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          ...+...+..+ ....+    ..+++++.+||.+||..||++||+++++++
T Consensus       205 ----~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         205 ----LKDVVPHVEKGYRMEAP----EGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             ----HHHHHHHHhcCCCCCCc----cCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                22344444433 22222    357899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=1.1e-29  Score=251.04  Aligned_cols=249  Identities=20%  Similarity=0.265  Sum_probs=162.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|....+ ..+|+|++.... .....+.+|++++..+ +||||+++++++..... +    
T Consensus         6 ~~~~~-~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~-~----   76 (260)
T cd05069           6 ESLRL-DVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKL-RHDKLVPLYAVVSEEPI-Y----   76 (260)
T ss_pred             HHeee-eeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCc-E----
Confidence            34555 46799999999999987655 469999885422 2345688899999987 59999999987743211 0    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      +.++--+ +              .+...           +..   ......    ..
T Consensus        77 ~----------------------v~e~~~~-~--------------~L~~~-----------~~~---~~~~~~----~~  101 (260)
T cd05069          77 I----------------------VTEFMGK-G--------------SLLDF-----------LKE---GDGKYL----KL  101 (260)
T ss_pred             E----------------------EEEcCCC-C--------------CHHHH-----------Hhh---CCCCCC----CH
Confidence            1                      1111000 0              00000           000   000000    00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      -...                     .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       102 ~~~~---------------------~~~~~---l~~al~~lH--~~~i~H~dl~~~Nill~---~~~~~~l~dfg~~~~~  152 (260)
T cd05069         102 PQLV---------------------DMAAQ---IADGMAYIE--RMNYIHRDLRAANILVG---DNLVCKIADFGLARLI  152 (260)
T ss_pred             HHHH---------------------HHHHH---HHHHHHHHH--hCCEeecccCcceEEEc---CCCeEEECCCccceEc
Confidence            0000                     02333   667788888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......++..|+|||++..      ..++.++|+|||||++|+|++ |.+||.+...          
T Consensus       153 ~~~~~~-------~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----------  209 (260)
T cd05069         153 EDNEYT-------ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMVN----------  209 (260)
T ss_pred             cCCccc-------ccCCCccchhhCCHHHhcc------CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH----------
Confidence            322110       1112346778999998853      357889999999999999999 9999976531          


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ......+..+ +..+  .+..++..+++||++||.+||++||+++++++
T Consensus       210 -----~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         210 -----REVLEQVERG-YRMP--CPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             -----HHHHHHHHcC-CCCC--CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                 2234444433 2222  12467899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=2.4e-30  Score=258.09  Aligned_cols=142  Identities=20%  Similarity=0.243  Sum_probs=105.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCC----CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchh
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPD----QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI  315 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~----~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEv  315 (539)
                      ++.++.|+|  ++||+||||||+|||+...+    ....+|++|||++......            ....|+..|+|||+
T Consensus       126 i~~~l~~lH--~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~  191 (274)
T cd05076         126 LASALSYLE--DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------------EERVERIPWIAPEC  191 (274)
T ss_pred             HHHHHHHHH--cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc------------cccccCCcccCchh
Confidence            677788888  99999999999999996532    1234899999987532211            12357888999998


Q ss_pred             hcccCCCCCCCCCcccchhhhhHHHHHHH-hCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCH
Q psy16343        316 VNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD  394 (539)
Q Consensus       316 l~~~~~~~~~~y~~~~DiWSlGvily~ll-~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~  394 (539)
                      +..     ...|+.++|+||+||++|+|+ +|.+||.+....               ... .+......+|.    ..++
T Consensus       192 ~~~-----~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---------------~~~-~~~~~~~~~~~----~~~~  246 (274)
T cd05076         192 VPG-----GNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS---------------EKE-RFYEKKHRLPE----PSCK  246 (274)
T ss_pred             hcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH---------------HHH-HHHHhccCCCC----CCCh
Confidence            853     245889999999999999984 799999765321               111 12222334443    3567


Q ss_pred             HHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        395 EAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       395 ~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ++++||.+||..||++|||+++++++
T Consensus       247 ~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         247 ELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHHh
Confidence            89999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=9e-30  Score=254.99  Aligned_cols=263  Identities=21%  Similarity=0.251  Sum_probs=163.8

Q ss_pred             CceeceeCceEEEEEEE----ccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVN----ILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~----~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|..    ..++..||+|.++... ......+.+|++++..+ +||||+++++++.+.....     
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-----   82 (284)
T cd05079           9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNG-----   82 (284)
T ss_pred             ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCCc-----
Confidence            56799999999999974    4578899999986432 22235688999999987 5999999998876542110     


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                               +.          -+.+|--+ +              .+..      |+.    .     .....+ ...++
T Consensus        83 ---------~~----------lv~e~~~g-~--------------~L~~------~l~----~-----~~~~~~-~~~~~  112 (284)
T cd05079          83 ---------IK----------LIMEFLPS-G--------------SLKE------YLP----R-----NKNKIN-LKQQL  112 (284)
T ss_pred             ---------eE----------EEEEccCC-C--------------CHHH------HHH----h-----ccCCCC-HHHHH
Confidence                     00          01111000 0              0000      000    0     000000 00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++.+.
T Consensus       113 ------------------------~i~~~---i~~aL~~lH--~~gi~H~dlkp~Nil~~~---~~~~~l~dfg~~~~~~  160 (284)
T cd05079         113 ------------------------KYAVQ---ICKGMDYLG--SRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIE  160 (284)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--HCCeeecccchheEEEcC---CCCEEECCCccccccc
Confidence                                    12333   667778888  999999999999999953   4569999999987653


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC-c--ccCc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG-W--QRGE  364 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~-~--~~~~  364 (539)
                      ......     ....+..|+..|+|||++..      ..|+.++|+||+||++|+|+++..|+......-.. .  ..++
T Consensus       161 ~~~~~~-----~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd05079         161 TDKEYY-----TVKDDLDSPVFWYAPECLIQ------SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQ  229 (284)
T ss_pred             cCccce-----eecCCCCCCccccCHHHhcc------CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccc
Confidence            322110     01124567888999999853      45888999999999999999988765432110000 0  0000


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      .   ........+..+. ..+  .+..++.++.+||.+||..||++||++++++++
T Consensus       230 ~---~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         230 M---TVTRLVRVLEEGK-RLP--RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             c---cHHHHHHHHHcCc-cCC--CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            0   0111122222222 122  235689999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=5.1e-30  Score=257.58  Aligned_cols=145  Identities=24%  Similarity=0.350  Sum_probs=108.8

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.+   .+.+||+|||+++.........      .....+++..|+|||++.. 
T Consensus       136 i~~~l~~LH--~~~ivH~dikp~nill~~---~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~apE~~~~-  203 (290)
T cd05045         136 ISRGMQYLA--EMKLVHRDLAARNVLVAE---GRKMKISDFGLSRDVYEEDSYV------KRSKGRIPVKWMAIESLFD-  203 (290)
T ss_pred             HHHHHHHHH--HCCeehhhhhhheEEEcC---CCcEEeccccccccccCccchh------cccCCCCCccccCHHHHcc-
Confidence            667778888  999999999999999953   4569999999987543221100      1123456788999998853 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                           ..++.++|+|||||++|+|++ |.+||.+..               .+.+...+..+ +..+.  ...++.++++
T Consensus       204 -----~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---------------~~~~~~~~~~~-~~~~~--~~~~~~~~~~  260 (290)
T cd05045         204 -----HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA---------------PERLFNLLKTG-YRMER--PENCSEEMYN  260 (290)
T ss_pred             -----CCcchHhHHHHHHHHHHHHHhcCCCCCCCCC---------------HHHHHHHHhCC-CCCCC--CCCCCHHHHH
Confidence                 458899999999999999998 999997643               22344444433 22222  2357899999


Q ss_pred             HHHHhccccccCCCCHHHHhc
Q psy16343        399 LIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l~  419 (539)
                      ||.+||..||++||+++++++
T Consensus       261 ~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         261 LMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHHccCCcccCCCHHHHHH
Confidence            999999999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=1.1e-29  Score=254.20  Aligned_cols=270  Identities=19%  Similarity=0.194  Sum_probs=162.9

Q ss_pred             cchhcccCceeceeCceEEEEEE----EccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~----~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .+.|....+.||+|+||+||++.    ...++..||+|++..... .....+.+|++++.++ +||||+++++++.....
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   80 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGG   80 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCC
Confidence            44552235789999999998764    345778899999864322 2345678899999987 69999999988754321


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..              +.+          +.+|--+ +              .+...+..                 ...
T Consensus        81 ~~--------------~~l----------v~e~~~~-~--------------~l~~~~~~-----------------~~l  104 (283)
T cd05080          81 KG--------------LQL----------IMEYVPL-G--------------SLRDYLPK-----------------HKL  104 (283)
T ss_pred             ce--------------EEE----------EecCCCC-C--------------CHHHHHHH-----------------cCC
Confidence            10              000          1111000 0              00000000                 000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...++                        .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+||
T Consensus       105 ~-~~~~~------------------------~i~~~---l~~~l~~lH--~~~i~H~dlkp~Nili~~---~~~~~l~df  151 (283)
T cd05080         105 N-LAQLL------------------------LFAQQ---ICEGMAYLH--SQHYIHRDLAARNVLLDN---DRLVKIGDF  151 (283)
T ss_pred             C-HHHHH------------------------HHHHH---HHHHHHHHH--HCCeeccccChheEEEcC---CCcEEEeec
Confidence            0 00000                        02233   667778888  999999999999999953   456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+++.........     .......++..|+|||++..      ..++.++|||||||++|+|++|..||......-...
T Consensus       152 g~~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~  220 (283)
T cd05080         152 GLAKAVPEGHEYY-----RVREDGDSPVFWYAVECLKE------NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM  220 (283)
T ss_pred             ccccccCCcchhh-----ccCCCCCCCceeeCHhHhcc------cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhh
Confidence            9987543221100     00112346678999998853      357889999999999999999999986532110000


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .....-......+...+..+ ...+.  -..++.++++|+.+||..||++|||+++++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         221 IGPKQGQMTVVRLIELLERG-MRLPC--PKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             hcccccccchhhhhhhhhcC-CCCCC--CCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            00000000001111111111 11111  1357899999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=7.6e-30  Score=253.94  Aligned_cols=256  Identities=22%  Similarity=0.316  Sum_probs=167.1

Q ss_pred             CceeceeCceEEEEEEEccC-----CcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         53 GEILGKGAYASVQTCVNILT-----ELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t-----~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .+.||+|+||.||+|+.+.+     ...||+|.+...... ....+.+|++++.++ +||||+++++++.+....+   .
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---l   85 (275)
T cd05046          10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAEPHY---M   85 (275)
T ss_pred             eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCCcce---E
Confidence            35799999999999997543     457999988654332 345788999999997 5999999999886654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +      .|.+.              -  +....            .+....+......+.           ... ... 
T Consensus        86 v------~e~~~--------------~--~~L~~------------~i~~~~~~~~~~~~~-----------~l~-~~~-  118 (275)
T cd05046          86 I------LEYTD--------------L--GDLKQ------------FLRATKSKDEKLKPP-----------PLS-TKQ-  118 (275)
T ss_pred             E------EEecC--------------C--CcHHH------------HHHhccccccccccc-----------CCC-HHH-
Confidence            1      11100              0  00000            000000000000000           000 000 


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                             ...+..+   ++.++.|+|  ++||+||||||+|||+..   .+.++|+|||++...
T Consensus       119 -----------------------~~~~~~~---l~~~l~~LH--~~~i~H~dlkp~Nili~~---~~~~~l~~~~~~~~~  167 (275)
T cd05046         119 -----------------------KVALCTQ---IALGMDHLS--NARFVHRDLAARNCLVSS---QREVKVSLLSLSKDV  167 (275)
T ss_pred             -----------------------HHHHHHH---HHHHHHHhh--hcCcccCcCccceEEEeC---CCcEEEccccccccc
Confidence                                   0013344   677888888  999999999999999954   456899999998643


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .....       .......+++.|+|||.+..      ..++.++|+|||||++|+|++ |.+||.+..           
T Consensus       168 ~~~~~-------~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~-----------  223 (275)
T cd05046         168 YNSEY-------YKLRNALIPLRWLAPEAVQE------DDFSTKSDVWSFGVLMWEVFTQGELPFYGLS-----------  223 (275)
T ss_pred             Ccccc-------cccCCceeEEeecChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCccccc-----------
Confidence            21110       01123467788999998853      346788999999999999998 889996532           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          .......+..+...++..  ..++..+.++|.+||..||++||++.|++.+
T Consensus       224 ----~~~~~~~~~~~~~~~~~~--~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         224 ----DEEVLNRLQAGKLELPVP--EGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             ----hHHHHHHHHcCCcCCCCC--CCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence                123455566555544332  3578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=5e-30  Score=258.36  Aligned_cols=265  Identities=19%  Similarity=0.253  Sum_probs=162.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCC--------------cEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeee
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTE--------------LEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQL  111 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~--------------~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l  111 (539)
                      +.|++ .+.||+|+||.||+|++..++              ..||||++.... ......+.+|++++.++ +||||+++
T Consensus         5 ~~~~~-~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~   82 (295)
T cd05097           5 QQLRL-KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRL   82 (295)
T ss_pred             HhCee-hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeE
Confidence            34665 467999999999999875432              358999986432 22345688999999997 59999999


Q ss_pred             eeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccc
Q psy16343        112 LEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA  191 (539)
Q Consensus       112 ~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~  191 (539)
                      ++++......+   .|                       .+|--+ +              .+...+.....     ...
T Consensus        83 ~~~~~~~~~~~---lv-----------------------~e~~~~-~--------------~L~~~l~~~~~-----~~~  116 (295)
T cd05097          83 LGVCVSDDPLC---MI-----------------------TEYMEN-G--------------DLNQFLSQREI-----EST  116 (295)
T ss_pred             EEEEcCCCccE---EE-----------------------EecCCC-C--------------cHHHHHHhccc-----ccc
Confidence            99987654322   11                       111000 0              00000000000     000


Q ss_pred             ccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC
Q psy16343        192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ  271 (539)
Q Consensus       192 ~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~  271 (539)
                      +.   ........+...   ++                  .+..+   ++.++.|+|  ++||+||||||+|||+..   
T Consensus       117 ~~---~~~~~~~~~~~~---~~------------------~i~~~---i~~al~~lH--~~~i~H~dlkp~Nill~~---  164 (295)
T cd05097         117 FT---HANNIPSVSIAN---LL------------------YMAVQ---IASGMKYLA--SLNFVHRDLATRNCLVGN---  164 (295)
T ss_pred             cc---ccccCCcccHHH---HH------------------HHHHH---HHHHHHHHH--hcCeeccccChhhEEEcC---
Confidence            00   000000000000   00                  02223   667788888  999999999999999953   


Q ss_pred             CCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh--CCCC
Q psy16343        272 LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC--GYPP  349 (539)
Q Consensus       272 ~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~--G~~P  349 (539)
                      .+.+||+|||++.........      .......+++.|+|||++..      ..++.++|+|||||++|+|++  |..|
T Consensus       165 ~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~~l~el~~~~~~~p  232 (295)
T cd05097         165 HYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMAWESILL------GKFTTASDVWAFGVTLWEMFTLCKEQP  232 (295)
T ss_pred             CCcEEecccccccccccCcce------eccCcCcCceeecChhhhcc------CCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence            456999999998754322110      01123456789999999863      458899999999999999988  6788


Q ss_pred             CCCCCCCCCCcccCccchhhHHHHHHHHh----c-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        350 FYGNCGEDCGWQRGETCHACQEILFHSIQ----Q-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       350 F~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      |...+..               .....+.    . +...+.. ....+++.+++||.+||..||++||+++++++
T Consensus       233 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         233 YSLLSDE---------------QVIENTGEFFRNQGRQIYLS-QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             CcccChH---------------HHHHHHHHhhhhccccccCC-CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            8764311               1111111    0 1111111 12357899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.97  E-value=1.5e-29  Score=248.51  Aligned_cols=247  Identities=22%  Similarity=0.319  Sum_probs=167.2

Q ss_pred             CceeceeCceEEEEEEEccCC----cEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTE----LEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~----~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||.|+||.||+|....++    ..||+|++...... ....+..|++.+..+ +|+||+++++++.+....+   .|
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---~i   79 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM---IV   79 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE---EE
Confidence            467999999999999998766    88999999644322 456788999999987 7999999999887654322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            .|.+-                 + +              .+...           +....   ...       +
T Consensus        80 ------~e~~~-----------------~-~--------------~l~~~-----------~~~~~---~~~-------~  100 (258)
T smart00219       80 ------MEYME-----------------G-G--------------DLLDY-----------LRKNR---PKE-------L  100 (258)
T ss_pred             ------EeccC-----------------C-C--------------CHHHH-----------HHhhh---hcc-------C
Confidence                  11000                 0 0              00000           00000   000       0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +...+.                  .+..+   ++.++.++|  ++||+||||||+||++.   ..+.++|+|||++....
T Consensus       101 ~~~~~~------------------~~~~q---l~~~l~~lh--~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~  154 (258)
T smart00219      101 SLSDLL------------------SFALQ---IARGMEYLE--SKNFIHRDLAARNCLVG---ENLVVKISDFGLSRDLY  154 (258)
T ss_pred             CHHHHH------------------HHHHH---HHHHHHHHh--cCCeeecccccceEEEc---cCCeEEEcccCCceecc
Confidence            000000                  03333   666777887  99999999999999994   44569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......       ....-+++.|+|||.+..      ..++.++|+|||||++|+|++ |.+||.+.+            
T Consensus       155 ~~~~~~-------~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~------------  209 (258)
T smart00219      155 DDDYYK-------KKGGKLPIRWMAPESLKD------GKFTSKSDVWSFGVLLWEIFTLGESPYPGMS------------  209 (258)
T ss_pred             cccccc-------cccCCCcccccChHHhcc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC------------
Confidence            321110       001237789999999842      467889999999999999998 889997643            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                         ...+...+..+......   ..++.++.++|.+||..||++|||+.|+++
T Consensus       210 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      210 ---NEEVLEYLKKGYRLPKP---ENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             ---HHHHHHHHhcCCCCCCC---CcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence               23345555554332211   247899999999999999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG1027|consensus

Probab=99.96  E-value=6.1e-31  Score=278.93  Aligned_cols=257  Identities=30%  Similarity=0.326  Sum_probs=169.9

Q ss_pred             cCceeceeCce-EEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         52 KGEILGKGAYA-SVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        52 ~~~~LG~G~fG-~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ..+++|.|+-| .||+|.-  .|+.||||.+-.   ..-....+||..|+....|||||+++..=.+....|    |   
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~Y----I---  580 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLY----I---  580 (903)
T ss_pred             cHHHcccCCCCcEEEEEee--CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEE----E---
Confidence            35789999998 5687764  678999998732   123456799999999989999999886544443322    1   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                        ..|-+-                 +.                +.+.+...   ..|...       .   ...|.|+  
T Consensus       581 --alELC~-----------------~s----------------L~dlie~~---~~d~~~-------~---~~i~~~~--  610 (903)
T KOG1027|consen  581 --ALELCA-----------------CS----------------LQDLIESS---GLDVEM-------Q---SDIDPIS--  610 (903)
T ss_pred             --EehHhh-----------------hh----------------HHHHHhcc---ccchhh-------c---ccccHHH--
Confidence              011110                 00                00000000   000000       0   0011111  


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC--CCceeccCCCcccccc
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL--SPVKLCDFDLGSGIKF  288 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~--~~ikl~DFGla~~~~~  288 (539)
                                            +..|   ++.+++.+|  +-+||||||||+||||...+..  ..++|+|||+++.+..
T Consensus       611 ----------------------~l~q---~~~GlaHLH--sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~  663 (903)
T KOG1027|consen  611 ----------------------VLSQ---IASGLAHLH--SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG  663 (903)
T ss_pred             ----------------------HHHH---HHHHHHHHH--hcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence                                  2233   455555555  9999999999999999875333  4679999999987765


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC-CCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G-~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      +.+.-     ..+.+..||-+|+|||++..      ..-..++||+||||++|..++| ..||...-.            
T Consensus       664 ~~sS~-----~r~s~~sGt~GW~APE~L~~------~~~~~avDiFslGCvfyYvltgG~HpFGd~~~------------  720 (903)
T KOG1027|consen  664 GKSSF-----SRLSGGSGTSGWQAPEQLRE------DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE------------  720 (903)
T ss_pred             Ccchh-----hcccCCCCcccccCHHHHhc------cccCcccchhhcCceEEEEecCCccCCCchHH------------
Confidence            54321     23567889999999999974      1224589999999999999986 899965321            


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           --.+|..+.+.+-.-.- .-..+|+|||.+||.+||..||+|.++|.||+|...
T Consensus       721 -----R~~NIl~~~~~L~~L~~-~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  721 -----RQANILTGNYTLVHLEP-LPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             -----hhhhhhcCccceeeecc-CchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence                 22457777766532110 111299999999999999999999999999999753

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.96  E-value=4.4e-29  Score=246.48  Aligned_cols=249  Identities=20%  Similarity=0.285  Sum_probs=158.4

Q ss_pred             ceeceeCceEEEEEEEcc---CCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         54 EILGKGAYASVQTCVNIL---TELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~---t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      ++||+|+||.||+|....   .+..||+|.+.... ......+.+|+.++..+ +||||+++++++...+...       
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~-------   72 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSP-------   72 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCc-------
Confidence            368999999999998754   34579999985432 22345677899988876 6999999998664322110       


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                             ++           +.+|-  .+                    |+        +..+......    ......+
T Consensus        73 -------~l-----------v~e~~--~~--------------------~~--------L~~~~~~~~~----~~~~~~~  100 (262)
T cd05058          73 -------LV-----------VLPYM--KH--------------------GD--------LRNFIRSETH----NPTVKDL  100 (262)
T ss_pred             -------EE-----------EEecC--CC--------------------CC--------HHHHHHhcCC----CCCHHHH
Confidence                   01           11110  00                    00        0000000000    0001110


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      .                     .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.....
T Consensus       101 ~---------------------~~~~~---i~~~l~~lH--~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~~~~~  151 (262)
T cd05058         101 I---------------------GFGLQ---VAKGMEYLA--SKKFVHRDLAARNCMLD---ESFTVKVADFGLARDIYDK  151 (262)
T ss_pred             H---------------------HHHHH---HHHHHHHHH--hCCccccccCcceEEEc---CCCcEEECCccccccccCC
Confidence            0                     02233   667788888  99999999999999995   3456999999998754321


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ... ..   .......+++.|+|||++..      ..++.++|||||||++|+|++ |.+||...+              
T Consensus       152 ~~~-~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--------------  207 (262)
T cd05058         152 EYY-SV---HNHTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--------------  207 (262)
T ss_pred             cce-ee---cccccCcCCccccChhHhcc------CccchHHHHHHHHHHHHHHHcCCCCCCCCCC--------------
Confidence            100 00   01123356788999998853      468889999999999999999 567776432              


Q ss_pred             hHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        369 CQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       369 ~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                       ...+...+..+.. ..+    ..+++.+.+|+.+||..||++||++.|+++.
T Consensus       208 -~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         208 -SFDITVYLLQGRRLLQP----EYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             -HHHHHHHHhcCCCCCCC----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence             1223334444322 222    2468899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.96  E-value=1.4e-29  Score=248.24  Aligned_cols=243  Identities=19%  Similarity=0.290  Sum_probs=159.9

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ++||+|+||.||+|.. .++..||+|++..... .....+.+|++++..+ +||||+++++++......+          
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~----------   68 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIY----------   68 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccE----------
Confidence            3699999999999985 4678899999864322 2234677899999986 6999999999886543221          


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                           +           +.++--+ +              .+...+..               .....    + |.  .+
T Consensus        69 -----l-----------v~e~~~~-~--------------~L~~~~~~---------------~~~~~----~-~~--~~   95 (250)
T cd05085          69 -----I-----------VMELVPG-G--------------DFLSFLRK---------------KKDEL----K-TK--QL   95 (250)
T ss_pred             -----E-----------EEECCCC-C--------------cHHHHHHh---------------cCCCC----C-HH--HH
Confidence                 1           1111000 0              00000000               00000    0 00  00


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                       .                 .+..+   +..++.|+|  ++||+||||||+||++.   ..+.+||+|||++........ 
T Consensus        96 -~-----------------~~~~~---i~~~l~~lH--~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~~~~~~-  148 (250)
T cd05085          96 -V-----------------KFALD---AAAGMAYLE--SKNCIHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIY-  148 (250)
T ss_pred             -H-----------------HHHHH---HHHHHHHHH--hCCeeecccChheEEEc---CCCeEEECCCccceecccccc-
Confidence             0                 02223   556677777  99999999999999994   345689999999864322111 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                       .     ......+++.|+|||++..      ..++.++|+||+||++|+|++ |..||.+...               .
T Consensus       149 -~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~---------------~  201 (250)
T cd05085         149 -S-----SSGLKQIPIKWTAPEALNY------GRYSSESDVWSYGILLWETFSLGVCPYPGMTN---------------Q  201 (250)
T ss_pred             -c-----cCCCCCCcccccCHHHhcc------CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH---------------H
Confidence             0     0112345678999999863      357889999999999999998 9999976531               2


Q ss_pred             HHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        372 ILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       372 ~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .....+..+. ..++    ..++.++.+||.+||..||++||++.++++
T Consensus       202 ~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         202 QAREQVEKGYRMSCP----QKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            2333444332 1222    357899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=1.3e-29  Score=253.13  Aligned_cols=260  Identities=19%  Similarity=0.217  Sum_probs=165.0

Q ss_pred             chhcccCceeceeCceEEEEEEEcc----CCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL----TELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~----t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      +.|.+ .++||+|+||.||+|.+..    ++..||+|++.... ......+.+|+.++..+ +||||+++++++......
T Consensus         6 ~~~~~-~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           6 DRVTL-SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGEP   83 (280)
T ss_pred             hheEE-eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCC
Confidence            34554 5789999999999999876    35789999886432 22345678899999987 699999999876543211


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .   .++                      ..+  ..+.             .+...+-.. ...+.     .  ...   
T Consensus        84 ~---~~~----------------------~~~--~~~~-------------~L~~~l~~~-~~~~~-----~--~~~---  112 (280)
T cd05043          84 P---FVL----------------------YPY--MNWG-------------NLKLFLQQC-RLGEA-----N--NPQ---  112 (280)
T ss_pred             C---EEE----------------------EEc--CCCC-------------cHHHHHHhc-ccccc-----c--ccc---
Confidence            1   010                      000  0000             000000000 00000     0  000   


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                          .++...++                  .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||
T Consensus       113 ----~l~~~~~~------------------~i~~~---i~~~l~~LH--~~~i~H~di~p~nil~~~---~~~~kl~d~g  162 (280)
T cd05043         113 ----ALSTQQLV------------------HMAIQ---IACGMSYLH--KRGVIHKDIAARNCVIDE---ELQVKITDNA  162 (280)
T ss_pred             ----CCCHHHHH------------------HHHHH---HHHHHHHHH--HCCEeecccCHhhEEEcC---CCcEEECCCC
Confidence                00000000                  02223   566777777  999999999999999954   3569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++.+.......      ......++..|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+      
T Consensus       163 ~~~~~~~~~~~~------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------  224 (280)
T cd05043         163 LSRDLFPMDYHC------LGDNENRPVKWMALESLVN------KEYSSASDVWSFGVLLWELMTLGQTPYVEID------  224 (280)
T ss_pred             CcccccCCceEE------eCCCCCcchhccCHHHHhc------CCCCchhhHHHhHHHHHHHhcCCCCCcCcCC------
Confidence            987543221100      0012346778999999863      468899999999999999998 999997643      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                               ...+...+..+ +.++.  +..+++++.++|.+||..||++|||+.++++
T Consensus       225 ---------~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         225 ---------PFEMAAYLKDG-YRLAQ--PINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             ---------HHHHHHHHHcC-CCCCC--CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                     12234444433 22222  2457899999999999999999999999884

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.96  E-value=9.2e-30  Score=252.34  Aligned_cols=253  Identities=23%  Similarity=0.283  Sum_probs=162.9

Q ss_pred             eeceeCceEEEEEEEccCC------cEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         55 ILGKGAYASVQTCVNILTE------LEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~t~------~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .||+|+||.||+|......      ..+|||.+.+.. ......+.+|+++++.+ +||||+++++++.+....+   .|
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---~v   77 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQY---II   77 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeE---EE
Confidence            5899999999999876544      679999886432 23355788899999986 6999999999886654322   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                             .++--+ +              .+...+..          ...   ........+..
T Consensus        78 -----------------------~e~~~~-~--------------~L~~~l~~----------~~~---~~~~~~~~~~~  106 (269)
T cd05044          78 -----------------------MELMEG-G--------------DLLSYLRD----------ARV---ERFGPPLLTLK  106 (269)
T ss_pred             -----------------------EeccCC-C--------------cHHHHHHH----------hhh---cccCCccccHH
Confidence                                   111000 0              00000000          000   00000000000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC--CCCCceeccCCCccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD--QLSPVKLCDFDLGSG  285 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~--~~~~ikl~DFGla~~  285 (539)
                      .+.-                     +..+   ++.++.|+|  ++||+||||||+|||+...+  ....+||+|||+++.
T Consensus       107 ~~~~---------------------~~~~---l~~~l~~lH--~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044         107 ELLD---------------------ICLD---VAKGCVYLE--QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             HHHH---------------------HHHH---HHHHHHHHH--hCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            0000                     2223   566778888  99999999999999996543  123689999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      ........      ......++..|+|||++..      ..++.++|+|||||++|+|++ |..||...+.         
T Consensus       161 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---------  219 (269)
T cd05044         161 IYKSDYYR------KEGEGLLPVRWMAPESLLD------GKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---------  219 (269)
T ss_pred             cccccccc------cCcccCCCccccCHHHHcc------CCcccchhHHHHHHHHHHHHHcCCCCCcccCH---------
Confidence            43221100      1123356788999999863      357889999999999999998 9999975431         


Q ss_pred             cchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            ......+..+ .+..+    ..++.++.+||.+||..||++||+++++++
T Consensus       220 ------~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         220 ------QEVLQHVTAGGRLQKP----ENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             ------HHHHHHHhcCCccCCc----ccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                  2233444433 22222    467899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0193|consensus

Probab=99.96  E-value=1.1e-30  Score=268.79  Aligned_cols=250  Identities=23%  Similarity=0.284  Sum_probs=170.7

Q ss_pred             cCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .++.||+|+||+||+|..  .| .||||+++....  ...+.|.+||..+++- .|-||+-+++|+..... .    |  
T Consensus       396 l~~rIGsGsFGtV~Rg~w--hG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-A----I--  464 (678)
T KOG0193|consen  396 LGERIGSGSFGTVYRGRW--HG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-A----I--  464 (678)
T ss_pred             ccceeccccccceeeccc--cc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-e----e--
Confidence            367899999999999864  44 499999975432  2345678899999986 59999999999876533 1    1  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                          |.-+  +.+-             .|++.+.-     +|              ++-|    
T Consensus       465 --------------------iTqw--CeGs-------------SLY~hlHv-----~e--------------tkfd----  486 (678)
T KOG0193|consen  465 --------------------ITQW--CEGS-------------SLYTHLHV-----QE--------------TKFD----  486 (678)
T ss_pred             --------------------eehh--ccCc-------------hhhhhccc-----hh--------------hhhh----
Confidence                                1111  1010             11111100     00              0000    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                            |.           ....+.+|   ++.+..|+|  .++|||||||-.||++.   +.+.|||.||||+.....-
T Consensus       487 ------m~-----------~~idIAqQ---iaqGM~YLH--AK~IIHrDLKSnNIFl~---~~~kVkIgDFGLatvk~~w  541 (678)
T KOG0193|consen  487 ------MN-----------TTIDIAQQ---IAQGMDYLH--AKNIIHRDLKSNNIFLH---EDLKVKIGDFGLATVKTRW  541 (678)
T ss_pred             ------HH-----------HHHHHHHH---HHHhhhhhh--hhhhhhhhccccceEEc---cCCcEEEecccceeeeeee
Confidence                  00           00115566   778888999  99999999999999994   3467999999998754322


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      .      ....+..+-|...||||||+.-   .+...|+..+|+||+||++|||++|..||...+.+...|.        
T Consensus       542 ~------g~~q~~qp~gsilwmAPEvIRm---qd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm--------  604 (678)
T KOG0193|consen  542 S------GEQQLEQPHGSLLWMAPEVIRM---QDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM--------  604 (678)
T ss_pred             c------cccccCCCccchhhhcHHHHhh---cccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE--------
Confidence            1      2234567889999999999973   2356899999999999999999999999986543332232        


Q ss_pred             HHHHHHHHhcCCCCCC-CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        370 QEILFHSIQQGHYDFP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p-~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             +-+|..... .....+...++++|+..|+..++++||...++|.
T Consensus       605 -------VGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  605 -------VGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             -------ecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence                   222311110 0112345669999999999999999999988875

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=1e-29  Score=252.18  Aligned_cols=251  Identities=20%  Similarity=0.321  Sum_probs=165.1

Q ss_pred             hcccCceeceeCceEEEEEEEccCCc---EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTEL---EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |++ .+.||+|+||.||+|.++.++.   .+|+|.++.... .....+.+|+.++..+ +||||+++++++.++...+  
T Consensus         6 ~~~-~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~--   81 (267)
T cd05066           6 IKI-EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPVM--   81 (267)
T ss_pred             eEe-eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccE--
Confidence            443 5789999999999998875543   699999864321 2245678899999987 5999999999886543322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .+|  ..+.             .+..      |+     ..    .....    
T Consensus        82 -lv-----------------------~e~--~~~~-------------~L~~------~~-----~~----~~~~~----  103 (267)
T cd05066          82 -IV-----------------------TEY--MENG-------------SLDA------FL-----RK----HDGQF----  103 (267)
T ss_pred             -EE-----------------------EEc--CCCC-------------CHHH------HH-----Hh----cCCCC----
Confidence             11                       111  0000             0000      00     00    00000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .....                     ..+..+   ++.++.++|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       104 ~~~~~---------------------~~i~~~---i~~~l~~lH--~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~  154 (267)
T cd05066         104 TVIQL---------------------VGMLRG---IASGMKYLS--DMGYVHRDLAARNILVN---SNLVCKVSDFGLSR  154 (267)
T ss_pred             CHHHH---------------------HHHHHH---HHHHHHHHH--HCCEeehhhchhcEEEC---CCCeEEeCCCCccc
Confidence            00000                     002333   667788888  99999999999999994   34569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      .........     .......++..|+|||++..      ..++.++|+||+||++|+|++ |..||.+...        
T Consensus       155 ~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--------  215 (267)
T cd05066         155 VLEDDPEAA-----YTTRGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--------  215 (267)
T ss_pred             cccccccee-----eecCCCccceeecCHhHhcc------CccCchhhhHHHHHHHHHHhcCCCCCcccCCH--------
Confidence            553221100     00112234568999999863      468899999999999999886 9999976431        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ......+..+ +.+|.  ...+++.+++|+.+||++||.+||++.++++
T Consensus       216 -------~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         216 -------QDVIKAIEEG-YRLPA--PMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             -------HHHHHHHhCC-CcCCC--CCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence                   2244455544 33332  2357889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=1.8e-29  Score=250.23  Aligned_cols=247  Identities=19%  Similarity=0.265  Sum_probs=163.3

Q ss_pred             CceeceeCceEEEEEEEccCCc---EEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTEL---EYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|....++.   .+|||.++... ......+.+|++++.++ +||||+++++++.+....+   .| 
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---lv-   84 (268)
T cd05063          10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAM---II-   84 (268)
T ss_pred             eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcE---EE-
Confidence            4689999999999999876654   79999986432 22345678899999887 5999999999887654322   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccchh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            .+|  ..+.             .+...+.. ...+..+.                 + 
T Consensus        85 ----------------------~e~--~~~~-------------~L~~~~~~~~~~~~~~~-----------------~-  109 (268)
T cd05063          85 ----------------------TEY--MENG-------------ALDKYLRDHDGEFSSYQ-----------------L-  109 (268)
T ss_pred             ----------------------EEc--CCCC-------------CHHHHHHhcCCCCCHHH-----------------H-
Confidence                                  111  0000             00000000 00000000                 0 


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                             ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++....
T Consensus       110 -----------------------~~~~~~---l~~al~~lH--~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~~~  158 (268)
T cd05063         110 -----------------------VGMLRG---IAAGMKYLS--DMNYVHRDLAARNILVN---SNLECKVSDFGLSRVLE  158 (268)
T ss_pred             -----------------------HHHHHH---HHHHHHHHH--HCCeeccccchhhEEEc---CCCcEEECCCccceecc
Confidence                                   013333   667788888  99999999999999995   34569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....     .........++.|+|||++..      ..|+.++|+||+||++|+|++ |..||...+            
T Consensus       159 ~~~~~-----~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------------  215 (268)
T cd05063         159 DDPEG-----TYTTSGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSFGERPYWDMS------------  215 (268)
T ss_pred             ccccc-----ceeccCCCcCceecCHHHhhc------CCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------------
Confidence            21110     000011223457999999863      468889999999999999997 999997643            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                         ...+...|..+. ..|.  ....+.++.+||.+||..||++||+++++++
T Consensus       216 ---~~~~~~~i~~~~-~~~~--~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         216 ---NHEVMKAINDGF-RLPA--PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             ---HHHHHHHHhcCC-CCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence               223455555432 2222  1357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=1.6e-29  Score=251.13  Aligned_cols=245  Identities=20%  Similarity=0.327  Sum_probs=162.2

Q ss_pred             CceeceeCceEEEEEEEccC---CcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILT---ELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|.....   ...||||...... ....+.+.+|+.+++.+ +||||+++++++.+...+.    | 
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~l----v-   84 (270)
T cd05056          11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITENPVWI----V-   84 (270)
T ss_pred             eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcCCCcEE----E-
Confidence            46899999999999987654   3469999886433 22345688899999987 5999999999886532110    1 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                            .++--+ +              .+...+...               ....    +.  
T Consensus        85 ----------------------~e~~~~-~--------------~L~~~l~~~---------------~~~~----~~--  106 (270)
T cd05056          85 ----------------------MELAPL-G--------------ELRSYLQVN---------------KYSL----DL--  106 (270)
T ss_pred             ----------------------EEcCCC-C--------------cHHHHHHhC---------------CCCC----CH--
Confidence                                  111000 0              000000000               0000    00  


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                       ..++                  .+..+   ++.++.|+|  ++|++||||||+|||+..   .+.+||+|||+++....
T Consensus       107 -~~~~------------------~~~~~---l~~~l~~lH--~~~~~H~dl~p~nili~~---~~~~~l~d~g~~~~~~~  159 (270)
T cd05056         107 -ASLI------------------LYSYQ---LSTALAYLE--SKRFVHRDIAARNVLVSS---PDCVKLGDFGLSRYLED  159 (270)
T ss_pred             -HHHH------------------HHHHH---HHHHHHHHH--hCCeeccccChheEEEec---CCCeEEccCceeeeccc
Confidence             0000                  02233   667777887  999999999999999954   45699999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....       ......+++.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.+.+.            
T Consensus       160 ~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------------  214 (270)
T cd05056         160 ESYY-------KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMLGVKPFQGVKN------------  214 (270)
T ss_pred             ccce-------ecCCCCccccccChhhhcc------CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH------------
Confidence            2110       0012235578999998852      468899999999999999986 9999976532            


Q ss_pred             hhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        368 ACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       368 ~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ......+..+. +..|    ..++.++++||.+||..||++|||+.+++..
T Consensus       215 ---~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         215 ---NDVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             ---HHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               12334444443 2222    3678999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.96  E-value=2.5e-29  Score=254.51  Aligned_cols=247  Identities=20%  Similarity=0.294  Sum_probs=161.4

Q ss_pred             CceeceeCceEEEEEEEccCCc----EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTEL----EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~----~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|.+..++.    .||+|++..... .....+.+|+.++..+ +||||+++++++......      
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~------   84 (303)
T cd05110          12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLSPTIQ------   84 (303)
T ss_pred             ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCCCce------
Confidence            4679999999999999888776    468888764322 1223577899998886 699999999987543210      


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                ++           .+|.-. +              .+...+..               .....       
T Consensus        85 ----------~v-----------~e~~~~-g--------------~l~~~~~~---------------~~~~~-------  106 (303)
T cd05110          85 ----------LV-----------TQLMPH-G--------------CLLDYVHE---------------HKDNI-------  106 (303)
T ss_pred             ----------ee-----------ehhcCC-C--------------CHHHHHHh---------------cccCC-------
Confidence                      10           001000 0              00000000               00000       


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +.-.+                  ..|..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++...
T Consensus       107 ~~~~~------------------~~~~~q---i~~~L~~LH--~~~ivH~dikp~Nill~~---~~~~kL~Dfg~~~~~~  160 (303)
T cd05110         107 GSQLL------------------LNWCVQ---IAKGMMYLE--ERRLVHRDLAARNVLVKS---PNHVKITDFGLARLLE  160 (303)
T ss_pred             CHHHH------------------HHHHHH---HHHHHHHHh--hcCeeccccccceeeecC---CCceEEcccccccccc
Confidence            00000                  002333   667788888  999999999999999943   4569999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ......      ......++..|+|||++..      ..++.++|+||+||++|+|++ |..||.+..            
T Consensus       161 ~~~~~~------~~~~~~~~~~y~~PE~~~~------~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------------  216 (303)
T cd05110         161 GDEKEY------NADGGKMPIKWMALECIHY------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------------  216 (303)
T ss_pred             Cccccc------ccCCCccccccCCHHHhcc------CCCChHHHHHHHHHHHHHHHhCCCCCCCCCC------------
Confidence            222110      1123456789999999853      468899999999999999997 999997642            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         .......+..+ ..++.  +...+.++.++|.+|+..||++||+++++++.
T Consensus       217 ---~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         217 ---TREIPDLLEKG-ERLPQ--PPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             ---HHHHHHHHHCC-CCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               11222333332 22222  23467899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=5.5e-29  Score=265.08  Aligned_cols=168  Identities=22%  Similarity=0.236  Sum_probs=113.5

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++.........       ......+|+.|+|||++...
T Consensus       318 l~~aL~~lH--~~~ivHrDLKp~NILl~~---~~~~kL~DFGla~~~~~~~~~-------~~~~g~~tp~Y~aPE~l~~~  385 (507)
T PLN03224        318 VLTGLRKLH--RIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINF-------NPLYGMLDPRYSPPEELVMP  385 (507)
T ss_pred             HHHHHHHHH--HCCeecCCCchHhEEECC---CCcEEEEeCcCccccccCCcc-------CccccCCCcceeChhhhcCC
Confidence            566778888  999999999999999954   356999999998643221110       01122458999999998531


Q ss_pred             CCCC--------------CCCCC--cccchhhhhHHHHHHHhCCC-CCCCCCCCCCCcccCccchhhHHHHHHHHhcCCC
Q psy16343        320 MGPE--------------ASGYD--KRCDLWSLGVVVYILLCGYP-PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHY  382 (539)
Q Consensus       320 ~~~~--------------~~~y~--~~~DiWSlGvily~ll~G~~-PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  382 (539)
                      ....              ...|+  ..+|+||+|||+|+|++|.. ||.+..........   . ......+..+....+
T Consensus       386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~---~-~~~~~~~r~~~~~~~  461 (507)
T PLN03224        386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ---Y-DNDLNRWRMYKGQKY  461 (507)
T ss_pred             CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh---c-cchHHHHHhhcccCC
Confidence            1000              01133  35899999999999999985 77643211100000   0 001112334455666


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccccc---cCCCCHHHHhcCCCccC
Q psy16343        383 DFPEGEWSTISDEAKDLIRRLLVKDA---RKRLSAASVLKHPWIST  425 (539)
Q Consensus       383 ~~p~~~~~~~s~~~~dli~~lL~~dP---~~R~ta~e~l~Hpw~~~  425 (539)
                      .|+  .|..++++++|||.+||.++|   .+|+|++|+|+||||..
T Consensus       462 ~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        462 DFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             Ccc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            665  477899999999999999876   68999999999999964

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=3.1e-29  Score=246.69  Aligned_cols=244  Identities=18%  Similarity=0.252  Sum_probs=162.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||++... .+..+|+|++.+.. .....+.+|+++++.+ +||||+++++++......+   .+     
T Consensus         9 ~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~---~v-----   77 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPIC---LV-----   77 (256)
T ss_pred             EeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceE---EE-----
Confidence            367999999999999875 46789999986432 2345788999999987 5999999999886654322   01     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                        .+|  ..+.             .+...+.. ...++.+                 .++.   
T Consensus        78 ------------------~e~--~~~~-------------~L~~~~~~~~~~~~~~-----------------~~~~---  104 (256)
T cd05112          78 ------------------FEF--MEHG-------------CLSDYLRAQRGKFSQE-----------------TLLG---  104 (256)
T ss_pred             ------------------EEc--CCCC-------------cHHHHHHhCccCCCHH-----------------HHHH---
Confidence                              111  0000             00000000 0000000                 0000   


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                           +..+   ++.++.++|  ++||+||||||+||++.   ..+.+||+|||++........
T Consensus       105 ---------------------~~~~---l~~~l~~lH--~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~  155 (256)
T cd05112         105 ---------------------MCLD---VCEGMAYLE--SSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQY  155 (256)
T ss_pred             ---------------------HHHH---HHHHHHHHH--HCCccccccccceEEEc---CCCeEEECCCcceeecccCcc
Confidence                                 2222   556677777  99999999999999994   345699999999875422111


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .       ......++..|+|||++.+      ..++.++|+|||||++|+|++ |.+||....               .
T Consensus       156 ~-------~~~~~~~~~~~~aPe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~---------------~  207 (256)
T cd05112         156 T-------SSTGTKFPVKWSSPEVFSF------SKYSSKSDVWSFGVLMWEVFSEGKTPYENRS---------------N  207 (256)
T ss_pred             c-------ccCCCccchhhcCHhHhcc------CCcChHHHHHHHHHHHHHHHcCCCCCCCcCC---------------H
Confidence            0       0112335678999998863      458889999999999999998 999997543               1


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ..+...+..+...+..   ...+.++.+|+.+||..||++|||+++++++
T Consensus       208 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         208 SEVVETINAGFRLYKP---RLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHHHHHHhCCCCCCCC---CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            2344455544222221   2368999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.9e-29  Score=246.70  Aligned_cols=250  Identities=22%  Similarity=0.281  Sum_probs=165.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|.+ .+.||+|+||.||+|... .+..||||.+.... .....+.+|+.+++++ +||||+++++++.+....+   .
T Consensus         6 ~~~~i-~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---~   78 (261)
T cd05034           6 ESLKL-ERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIY---I   78 (261)
T ss_pred             hheee-eeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceE---E
Confidence            44555 578999999999999865 45779999986432 3456788999999987 5999999999886543322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                       .+|  ..+.             .+...+..              .....       
T Consensus        79 v-----------------------~e~--~~~~-------------~L~~~i~~--------------~~~~~-------   99 (261)
T cd05034          79 V-----------------------TEY--MSKG-------------SLLDFLKS--------------GEGKK-------   99 (261)
T ss_pred             E-----------------------Eec--cCCC-------------CHHHHHhc--------------cccCC-------
Confidence            1                       111  0000             00000000              00000       


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      .+...++                  .+..+   ++.++.|+|  ++||+||||||+||++..   .+.+||+|||++...
T Consensus       100 ~~~~~~~------------------~~~~~---i~~al~~lh--~~~i~h~di~p~nili~~---~~~~~l~d~g~~~~~  153 (261)
T cd05034         100 LRLPQLV------------------DMAAQ---IAEGMAYLE--SRNYIHRDLAARNILVGE---NLVCKIADFGLARLI  153 (261)
T ss_pred             CCHHHHH------------------HHHHH---HHHHHHHHH--hCCcccCCcchheEEEcC---CCCEEECccccceec
Confidence            0000000                  02333   667778888  999999999999999954   456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......++..|+|||.+.+      ..++.++|+||+||++|+|++ |++||.+.+           
T Consensus       154 ~~~~~~-------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----------  209 (261)
T cd05034         154 EDDEYT-------AREGAKFPIKWTAPEAANY------GRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-----------  209 (261)
T ss_pred             cchhhh-------hhhccCCCccccCHHHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-----------
Confidence            321110       0112234678999999863      457889999999999999998 999997643           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          .......+..+ +..+.  ....+.+++++|.+||..||++||++++++.
T Consensus       210 ----~~~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         210 ----NREVLEQVERG-YRMPR--PPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             ----HHHHHHHHHcC-CCCCC--CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                12244445433 22221  1346889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=4.5e-29  Score=249.69  Aligned_cols=264  Identities=20%  Similarity=0.198  Sum_probs=160.6

Q ss_pred             CceeceeCceEEEEEEE----ccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVN----ILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~----~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|..    ..++..||||.+..........+.+|++++..+ +||||+++++++.......      
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~------   81 (284)
T cd05081           9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRN------   81 (284)
T ss_pred             eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCCCc------
Confidence            46799999999999973    457889999998654433345678999999987 5999999998764321100      


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                             ..+           +.+|--+ +              .+...           +..    ....... ..+  
T Consensus        82 -------~~l-----------v~e~~~~-~--------------~L~~~-----------l~~----~~~~l~~-~~~--  110 (284)
T cd05081          82 -------LRL-----------VMEYLPY-G--------------SLRDY-----------LQK----HRERLDH-RKL--  110 (284)
T ss_pred             -------eEE-----------EEEecCC-C--------------CHHHH-----------HHh----cCcCCCH-HHH--
Confidence                   001           1111000 0              00000           000    0000000 000  


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                            ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.....
T Consensus       111 ----------------------~~~~~~---l~~aL~~LH--~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081         111 ----------------------LLYASQ---ICKGMEYLG--SKRYVHRDLATRNILVE---SENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             ----------------------HHHHHH---HHHHHHHHH--HCCceeccCCHhhEEEC---CCCeEEECCCcccccccC
Confidence                                  002333   667788888  99999999999999994   345699999999876533


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch-
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH-  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~-  367 (539)
                      ......     ......++..|+|||++..      ..|+.++|+||+||++|+|++|..|+...... .....+.... 
T Consensus       161 ~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~  228 (284)
T cd05081         161 DKEYYK-----VREPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQG  228 (284)
T ss_pred             CCccee-----ecCCCCCceEeeCHHHhcc------CCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhccccccc
Confidence            221000     0011234456999999853      45888999999999999999998776543210 0000000000 


Q ss_pred             -hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 -ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 -~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                       .....+...+.. ...++.  ...++.++.+||.+||..||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         229 QMIVYHLIELLKN-NGRLPA--PPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             ccchHHHHHHHhc-CCcCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             000111122222 222222  1357899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1167|consensus

Probab=99.96  E-value=4.4e-30  Score=254.96  Aligned_cols=273  Identities=25%  Similarity=0.377  Sum_probs=171.7

Q ss_pred             CceeceeCceEEEEEEEcc---CCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNIL---TELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~---t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||+|+|++||++.+..   ..+.||+|.|....  ...++..|++.|..+.++.||+++.+.+..++...   .|  
T Consensus        41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~---iv--  113 (418)
T KOG1167|consen   41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA---IV--  113 (418)
T ss_pred             hccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeE---EE--
Confidence            5789999999999999887   78899999986432  34678999999999999999999998887655432   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                          .+                                               |+..+....+        ....++.-.
T Consensus       114 ----lp-----------------------------------------------~~~H~~f~~l--------~~~l~~~~i  134 (418)
T KOG1167|consen  114 ----LP-----------------------------------------------YFEHDRFRDL--------YRSLSLAEI  134 (418)
T ss_pred             ----ec-----------------------------------------------ccCccCHHHH--------HhcCCHHHH
Confidence                11                                               0000000000        000011111


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc-cc
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KF  288 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~-~~  288 (539)
                      ..-+++                        +..|+.++|  ++|||||||||.|+|+....+  .-.|+|||+|... ..
T Consensus       135 ~~Yl~~------------------------ll~Al~~~h--~~GIvHRDiKpsNFL~n~~t~--rg~LvDFgLA~~~d~~  186 (418)
T KOG1167|consen  135 RWYLRN------------------------LLKALAHLH--KNGIVHRDIKPSNFLYNRRTQ--RGVLVDFGLAQRYDGY  186 (418)
T ss_pred             HHHHHH------------------------HHHHhhhhh--ccCccccCCCccccccccccC--CceEEechhHHHHHhh
Confidence            111222                        455666666  999999999999999975443  4579999998611 00


Q ss_pred             C-----CC----CCCC--------------------------CCCCCccccccCcccccchhhcccCCCCCCCCCcccch
Q psy16343        289 N-----TS----VHSP--------------------------LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  333 (539)
Q Consensus       289 ~-----~~----~~~~--------------------------~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~Di  333 (539)
                      .     ..    ...+                          .....-....|||+|+||||+.+     ...-+.++||
T Consensus       187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k-----~~~QttaiDi  261 (418)
T KOG1167|consen  187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR-----CPRQTTAIDI  261 (418)
T ss_pred             hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh-----ccCcCCccce
Confidence            0     00    0000                          00001233479999999999975     2345678999


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCC-CC------------------------CcccCccchhhHHHH--HH-----HHhcCC
Q psy16343        334 WSLGVVVYILLCGYPPFYGNCGE-DC------------------------GWQRGETCHACQEIL--FH-----SIQQGH  381 (539)
Q Consensus       334 WSlGvily~ll~G~~PF~~~~~~-~~------------------------~~~~~~~~~~~~~~~--~~-----~i~~~~  381 (539)
                      ||.|||+-.++++..||.....+ +.                        .|+.. ..+...+..  +.     .+....
T Consensus       262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks-n~~~~~e~~~~f~s~~~~~~~~~~  340 (418)
T KOG1167|consen  262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKS-NIPTIPELRVNFETLHIESIYKSR  340 (418)
T ss_pred             eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccc-cccccHHHHhchhccChhhccccc
Confidence            99999999999999998754321 11                        11100 000000100  11     111111


Q ss_pred             C-CCCCCCCCC-CCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        382 Y-DFPEGEWST-ISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       382 ~-~~p~~~~~~-~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      . ......|.. .+..+.||+.+||+.||.+|+||+++|+||||..
T Consensus       341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence            1 112223433 4558999999999999999999999999999974

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=7.9e-29  Score=244.80  Aligned_cols=250  Identities=22%  Similarity=0.311  Sum_probs=163.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||.||++... .+..+|+|.+.... .....+.+|+++++.+ +|+||+++++++.+. ..+   
T Consensus         5 ~~~~~~-~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~-~~~---   76 (260)
T cd05073           5 RESLKL-EKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTL-QHDKLVKLHAVVTKE-PIY---   76 (260)
T ss_pred             ccceeE-EeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhc-CCCCcceEEEEEcCC-CeE---
Confidence            345555 578999999999999754 45679999886432 2345788899999987 599999999887651 111   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .+                       .++--+ +              .+...+...              ...    ..+
T Consensus        77 ~v-----------------------~e~~~~-~--------------~L~~~~~~~--------------~~~----~~~  100 (260)
T cd05073          77 II-----------------------TEFMAK-G--------------SLLDFLKSD--------------EGS----KQP  100 (260)
T ss_pred             EE-----------------------EEeCCC-C--------------cHHHHHHhC--------------Ccc----ccC
Confidence            01                       111000 0              000000000              000    000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      .=.+                     ..|..+   ++.++.|+|  ++||+||||||+||++.   ..+.+||+|||++..
T Consensus       101 ~~~~---------------------~~~~~~---l~~aL~~lH--~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~  151 (260)
T cd05073         101 LPKL---------------------IDFSAQ---IAEGMAFIE--QRNYIHRDLRAANILVS---ASLVCKIADFGLARV  151 (260)
T ss_pred             HHHH---------------------HHHHHH---HHHHHHHHH--hCCccccccCcceEEEc---CCCcEEECCCcceee
Confidence            0000                     002333   667777887  99999999999999994   446799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      +......       ......++..|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+.         
T Consensus       152 ~~~~~~~-------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---------  209 (260)
T cd05073         152 IEDNEYT-------AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---------  209 (260)
T ss_pred             ccCCCcc-------cccCCcccccccCHhHhcc------CCcCccccchHHHHHHHHHHhcCCCCCCCCCH---------
Confidence            4322110       0112345678999999863      457889999999999999998 9999976531         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            ..+...+..+ +..+  ....++.++.+++.+||.+||++||++.++++
T Consensus       210 ------~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         210 ------PEVIRALERG-YRMP--RPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             ------HHHHHHHhCC-CCCC--CcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                  2233444443 2222  12467899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=6.7e-29  Score=247.90  Aligned_cols=248  Identities=21%  Similarity=0.304  Sum_probs=164.7

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCc----EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTEL----EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~----~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|++ .+.||+|+||.||+|..+.+|.    .+|+|.+.+... .....+.+|++++..+ +||||+++++++.... .+
T Consensus         8 ~~~~-~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~   84 (279)
T cd05057           8 ELEK-IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLSSQ-VQ   84 (279)
T ss_pred             HcEE-cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCc-eE
Confidence            3443 5789999999999999877665    589998865432 1235678899999987 6999999999876521 11


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCC
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~  201 (539)
                                     +           +..|--+ +              .+...+.. ...+..+..            
T Consensus        85 ---------------~-----------v~e~~~~-g--------------~L~~~l~~~~~~~~~~~~------------  111 (279)
T cd05057          85 ---------------L-----------ITQLMPL-G--------------CLLDYVRNHKDNIGSQYL------------  111 (279)
T ss_pred             ---------------E-----------EEecCCC-C--------------cHHHHHHhccCCCCHHHH------------
Confidence                           1           1111000 0              00000000 000000000            


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                                   ..|..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||
T Consensus       112 -----------------------------~~~~~q---i~~~l~~LH--~~~i~H~di~p~nil~~~---~~~~kL~dfg  154 (279)
T cd05057         112 -----------------------------LNWCVQ---IAKGMSYLE--EKRLVHRDLAARNVLVKT---PQHVKITDFG  154 (279)
T ss_pred             -----------------------------HHHHHH---HHHHHHHHH--hCCEEecccCcceEEEcC---CCeEEECCCc
Confidence                                         013334   677888888  899999999999999953   4569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++.........      ......++..|+|||.+..      ..|+.++|+||+||++|+|++ |.+||.+..      
T Consensus       155 ~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------  216 (279)
T cd05057         155 LAKLLDVDEKEY------HAEGGKVPIKWMALESILH------RIYTHKSDVWSYGVTVWELMTFGAKPYEGIP------  216 (279)
T ss_pred             ccccccCcccce------ecCCCcccccccCHHHhhc------CCcCchhhHHHHHHHHHHHhcCCCCCCCCCC------
Confidence            987654222100      0112234678999998852      468889999999999999998 999997653      


Q ss_pred             ccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        361 QRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                               .+.+...+..+. +..|    ...+.++.+++.+||..||++||++.++++
T Consensus       217 ---------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         217 ---------AVEIPDLLEKGERLPQP----PICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             ---------HHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                     233445555443 2222    246789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=3.2e-29  Score=248.77  Aligned_cols=250  Identities=22%  Similarity=0.301  Sum_probs=163.3

Q ss_pred             CceeceeCceEEEEEEEccCCc---EEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTEL---EYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|....++.   .||||++.+.. ......+..|+.+++.+ +||||+++++++.++...+    + 
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~----l-   82 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVM----I-   82 (269)
T ss_pred             EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceE----E-
Confidence            5789999999999999887665   59999986532 22345788899999886 6999999999886654322    1 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                           +.+|  ..+.             .+...           +..    .....+ ..+++ 
T Consensus        83 ---------------------v~e~--~~~~-------------~L~~~-----------l~~----~~~~~~-~~~~~-  109 (269)
T cd05065          83 ---------------------ITEF--MENG-------------ALDSF-----------LRQ----NDGQFT-VIQLV-  109 (269)
T ss_pred             ---------------------EEec--CCCC-------------cHHHH-----------Hhh----CCCCCC-HHHHH-
Confidence                                 1111  0000             00000           000    000000 00000 


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                             .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.....
T Consensus       110 -----------------------~i~~~---l~~al~~lH--~~g~~H~dl~p~nili~---~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065         110 -----------------------GMLRG---IAAGMKYLS--EMNYVHRDLAARNILVN---SNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             -----------------------HHHHH---HHHHHHHHH--HCCEeecccChheEEEc---CCCcEEECCCcccccccc
Confidence                                   02233   667788888  99999999999999994   445699999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .......  . ......++..|+|||++..      ..|+.++|+||+||++|+|++ |.+||.+.+             
T Consensus       159 ~~~~~~~--~-~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-------------  216 (269)
T cd05065         159 DTSDPTY--T-SSLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMS-------------  216 (269)
T ss_pred             Ccccccc--c-cccCCCcceeecCHhHhcc------CcccchhhhhhhHHHHHHHhcCCCCCCCCCC-------------
Confidence            2110000  0 0001112457999999853      468889999999999999886 999997643             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                        .......+... +..|.  ...++..+.++|.+||..||++||++++++.
T Consensus       217 --~~~~~~~i~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         217 --NQDVINAIEQD-YRLPP--PMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             --HHHHHHHHHcC-CcCCC--cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence              12244444332 33332  2357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.96  E-value=5.8e-29  Score=244.77  Aligned_cols=242  Identities=20%  Similarity=0.275  Sum_probs=160.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|.+ .+.||+|+||.||++.  .++..||+|++...  .....+.+|+.++.++ +||||+++++++..... +    +
T Consensus         7 ~~~~-~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~-~----~   75 (254)
T cd05083           7 KLTL-GEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD--VTAQAFLEETAVMTKL-HHKNLVRLLGVILHNGL-Y----I   75 (254)
T ss_pred             Hcee-eeeeccCCCCceEecc--cCCCceEEEeecCc--chHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCCc-E----E
Confidence            3554 5789999999999985  47888999998542  2345688899999886 59999999988754321 1    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                      +                      .++--+ +              .+...+...              ...... ...++
T Consensus        76 v----------------------~e~~~~-~--------------~L~~~l~~~--------------~~~~~~-~~~~~  103 (254)
T cd05083          76 V----------------------MELMSK-G--------------NLVNFLRTR--------------GRALVS-VIQLL  103 (254)
T ss_pred             E----------------------EECCCC-C--------------CHHHHHHhc--------------CcCCCC-HHHHH
Confidence            1                      111000 0              000000000              000000 00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++|++||||||+|||+..   .+.+||+|||++....
T Consensus       104 ------------------------~~~~q---i~~al~~lH--~~~~~H~dl~p~nili~~---~~~~kl~Dfg~~~~~~  151 (254)
T cd05083         104 ------------------------QFSLD---VAEGMEYLE--SKKLVHRDLAARNILVSE---DGVAKVSDFGLARVGS  151 (254)
T ss_pred             ------------------------HHHHH---HHHHHHHHH--hCCeeccccCcceEEEcC---CCcEEECCCccceecc
Confidence                                    02334   667778888  999999999999999943   4569999999986432


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ...           .....+..|+|||++..      ..++.++|+|||||++|+|++ |.+||.+.+            
T Consensus       152 ~~~-----------~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------------  202 (254)
T cd05083         152 MGV-----------DNSKLPVKWTAPEALKH------KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS------------  202 (254)
T ss_pred             ccC-----------CCCCCCceecCHHHhcc------CCcCchhhHHHHHHHHHHHHhCCCCCCccCC------------
Confidence            111           12234568999998852      458889999999999999997 999997653            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                         .......+..+ +..+.  ...++.++++||.+||..||++||++++++.
T Consensus       203 ---~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         203 ---LKEVKECVEKG-YRMEP--PEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             ---HHHHHHHHhCC-CCCCC--CCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence               12234444443 22221  1367899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=1.9e-28  Score=247.00  Aligned_cols=268  Identities=19%  Similarity=0.252  Sum_probs=161.6

Q ss_pred             hhcccCceeceeCceEEEEEEEcc----------------CCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeee
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNIL----------------TELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQ  110 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~----------------t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~  110 (539)
                      .|++ .+.||+|+||.||+|.+..                ++..||+|++.... .....++.+|++++..+ +||||++
T Consensus         6 ~~~~-~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~   83 (296)
T cd05095           6 RLTF-KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNIIR   83 (296)
T ss_pred             hcee-eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcce
Confidence            3555 5689999999999986432                34479999986432 22345788999999987 5999999


Q ss_pred             eeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccc
Q psy16343        111 LLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN  190 (539)
Q Consensus       111 l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~  190 (539)
                      +++++.+....+   .+                       .+|--+ +              .+...+....      ..
T Consensus        84 ~~~~~~~~~~~~---lv-----------------------~e~~~~-~--------------~L~~~l~~~~------~~  116 (296)
T cd05095          84 LLAVCITSDPLC---MI-----------------------TEYMEN-G--------------DLNQFLSRHE------PQ  116 (296)
T ss_pred             EEEEEecCCccE---EE-----------------------EEeCCC-C--------------cHHHHHHhcC------cc
Confidence            999887654332   11                       111000 0              0000000000      00


Q ss_pred             cccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC
Q psy16343        191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD  270 (539)
Q Consensus       191 ~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~  270 (539)
                            ...........+...++.                  +..+   ++.++.|+|  ++||+||||||+|||+..  
T Consensus       117 ------~~~~~~~~~~~~~~~~~~------------------~~~~---i~~al~~lH--~~~i~H~dlkp~Nili~~--  165 (296)
T cd05095         117 ------EAAEKADVVTISYSTLIF------------------MATQ---IASGMKYLS--SLNFVHRDLATRNCLVGK--  165 (296)
T ss_pred             ------cccccccccccCHHHHHH------------------HHHH---HHHHHHHHH--HCCeecccCChheEEEcC--
Confidence                  000000000011111111                  2223   667778888  999999999999999953  


Q ss_pred             CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh--CCC
Q psy16343        271 QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC--GYP  348 (539)
Q Consensus       271 ~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~--G~~  348 (539)
                       .+.+||+|||+++.+......      ....+..+++.|+|||++..      ..|+.++|+|||||++|+|++  |..
T Consensus       166 -~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~------~~~~~~~DiwSlG~~l~el~~~~~~~  232 (296)
T cd05095         166 -NYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMSWESILL------GKFTTASDVWAFGVTLWEILTLCKEQ  232 (296)
T ss_pred             -CCCEEeccCcccccccCCcce------eccCcCcCccccCCHHHHhc------CCccchhhhhHHHHHHHHHHHhCCCC
Confidence             456999999998754322110      01123345678999998753      358899999999999999998  778


Q ss_pred             CCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       349 PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ||...+..+.        .......+.... ....+|..  ...++.+++||.+||..||++||++.++++
T Consensus       233 p~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         233 PYSQLSDEQV--------IENTGEFFRDQG-RQVYLPKP--ALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             CccccChHHH--------HHHHHHHHhhcc-ccccCCCC--CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            9975432110        000000111110 11112221  346789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=2.9e-29  Score=247.01  Aligned_cols=241  Identities=17%  Similarity=0.236  Sum_probs=156.8

Q ss_pred             ceeceeCceEEEEEEEccCC----------cEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         54 EILGKGAYASVQTCVNILTE----------LEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~----------~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.||+|+||.||++.+..++          ..+|+|++...... ...+.+|+.++..+ +||||+++++++.. ...  
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~--   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQL-SHKHLVKLYGVCVR-DEN--   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcC-CCcchhheeeEEec-CCc--
Confidence            36899999999999998777          35788877543222 56788899999887 59999999987755 211  


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                   +++           .+|--+ +              .+...           +..    ......  
T Consensus        76 -------------~lv-----------~e~~~~-~--------------~L~~~-----------l~~----~~~~~~--   99 (259)
T cd05037          76 -------------IMV-----------EEYVKF-G--------------PLDVF-----------LHR----EKNNVS--   99 (259)
T ss_pred             -------------EEE-----------EEcCCC-C--------------cHHHH-----------HHh----hccCCC--
Confidence                         111           111000 0              00000           000    000000  


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC----CCCCceecc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----QLSPVKLCD  279 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~----~~~~ikl~D  279 (539)
                       .-|    +                  ..+.++   ++.++.|+|  ++||+||||||+|||+..++    ....+||+|
T Consensus       100 -~~~----~------------------~~~~~~---i~~~l~~LH--~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D  151 (259)
T cd05037         100 -LHW----K------------------LDVAKQ---LASALHYLE--DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD  151 (259)
T ss_pred             -HHH----H------------------HHHHHH---HHHHHHHHh--hCCeecccCccceEEEecCccccCCceeEEeCC
Confidence             000    0                  003334   677788888  99999999999999996543    123699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||++......            ....++..|+|||++...    ...++.++|+||+||++|+|++ |..||...+... 
T Consensus       152 fg~a~~~~~~------------~~~~~~~~y~aPE~~~~~----~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~-  214 (259)
T cd05037         152 PGIPITVLSR------------EERVERIPWIAPECIRNG----QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE-  214 (259)
T ss_pred             CCcccccccc------------cccccCCCccChhhhcCC----CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-
Confidence            9998754321            134677889999998631    1368889999999999999999 578886543110 


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                    ...... .....+.    ..+.++.+||.+||..||.+|||+.++++
T Consensus       215 --------------~~~~~~-~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         215 --------------KERFYQ-DQHRLPM----PDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             --------------HHHHHh-cCCCCCC----CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence                          111111 1111221    12478999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=8.4e-29  Score=245.61  Aligned_cols=250  Identities=24%  Similarity=0.339  Sum_probs=164.5

Q ss_pred             CceeceeCceEEEEEEEcc-CCcEEEEEEeccCC----------CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         53 GEILGKGAYASVQTCVNIL-TELEYAVKIIDKLP----------GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~-t~~~vAvK~i~k~~----------~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.||+|+||.||+|.+.. ++..+|+|.+....          .....++.+|+.++.+..+||||+++++++.++...
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   84 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL   84 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence            4579999999999999887 67889999885321          112245667888887766899999999988765432


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +    ++     .|.+-                 + +              .+...+..        ...    ...   
T Consensus        85 ~----lv-----~e~~~-----------------~-~--------------~l~~~l~~--------~~~----~~~---  108 (269)
T cd08528          85 Y----IV-----MDLIE-----------------G-A--------------PLGEHFNS--------LKE----KKQ---  108 (269)
T ss_pred             E----EE-----EecCC-----------------C-C--------------cHHHHHHH--------HHh----ccC---
Confidence            2    11     11100                 0 0              00000000        000    000   


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                          .|+... ++.                 +..+   ++.++.|+|  + +||+||||||+|||+.   ..+.+||+||
T Consensus       109 ----~~~~~~-~~~-----------------~~~~---l~~~l~~lh--~~~~i~H~dl~~~nil~~---~~~~~~l~df  158 (269)
T cd08528         109 ----RFTEER-IWN-----------------IFVQ---MVLALRYLH--KEKRIVHRDLTPNNIMLG---EDDKVTITDF  158 (269)
T ss_pred             ----CCCHHH-HHH-----------------HHHH---HHHHHHHhc--cCCceeecCCCHHHEEEC---CCCcEEEecc
Confidence                000000 000                 2222   556677777  5 6899999999999995   4456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++.......         ......|+..|+|||++..      ..++.++|+|||||++|+|++|.+||....      
T Consensus       159 g~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~------~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~------  217 (269)
T cd08528         159 GLAKQKQPES---------KLTSVVGTILYSCPEIVKN------EPYGEKADVWAFGCILYQMCTLQPPFYSTN------  217 (269)
T ss_pred             cceeeccccc---------ccccccCcccCcChhhhcC------CCCchHHHHHHHHHHHHHHHhCCCcccccC------
Confidence            9987543221         2235678999999999863      357889999999999999999999997542      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                               .......+..+.+....  ...+++++.+||.+||..||++||++.|+..+
T Consensus       218 ---------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         218 ---------MLSLATKIVEAVYEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             ---------HHHHHHHHhhccCCcCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence                     12233444444433221  23578999999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.96  E-value=1.2e-28  Score=244.92  Aligned_cols=154  Identities=21%  Similarity=0.297  Sum_probs=106.3

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.........      ......+|++.|+|||++...
T Consensus       108 i~~al~~lH--~~~i~H~dikp~nil~~---~~~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~  176 (268)
T cd05086         108 IAAGVTHMH--KHNFLHSDLALRNCFLT---SDLTVKVGDYGIGPSRYKEDYI------ETEDDKCVPLRWLAPELVGEF  176 (268)
T ss_pred             HHHHHHHHH--HCCeeccCCccceEEEc---CCccEEecccccccccCcchhh------hcccCCcCcccccCchhcccc
Confidence            667888888  99999999999999994   4456999999987532111100      011246789999999998531


Q ss_pred             CC-CCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCC-CCCCHHH
Q psy16343        320 MG-PEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEW-STISDEA  396 (539)
Q Consensus       320 ~~-~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~-~~~s~~~  396 (539)
                      .+ .....++.++||||+||++|+|++ |.+||.....              .+.+...+..+...++.+.+ ..+++..
T Consensus       177 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (268)
T cd05086         177 HGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--------------REVLNHVIKDQQVKLFKPQLELPYSERW  242 (268)
T ss_pred             cCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--------------HHHHHHHHhhcccccCCCccCCCCcHHH
Confidence            11 012346788999999999999997 5778865321              12222233333333333222 3478899


Q ss_pred             HHHHHHhccccccCCCCHHHHhc
Q psy16343        397 KDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       397 ~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .++|..|+ .||++||+++++++
T Consensus       243 ~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         243 YEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHh-hCcccCCCHHHHHH
Confidence            99999998 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0197|consensus

Probab=99.96  E-value=6.7e-29  Score=254.08  Aligned_cols=240  Identities=23%  Similarity=0.350  Sum_probs=168.2

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK  133 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK  133 (539)
                      +.||+|-||.|+.|....+ ..||+|.+... ......+.+|+++|+++. |+|||+|++++..+...+   .|      
T Consensus       212 ~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piy---IV------  279 (468)
T KOG0197|consen  212 RELGSGQFGEVWLGKWNGS-TKVAVKTIKEG-SMSPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIY---IV------  279 (468)
T ss_pred             HHhcCCccceEEEEEEcCC-CcccceEEecc-ccChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceE---EE------
Confidence            5699999999999976433 36999999643 334567889999999975 999999999998765332   11      


Q ss_pred             CCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC--CCcc-cccccccccCCCCCCCCcccchhhhh
Q psy16343        134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS--AEFM-APEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       134 ~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt--~~y~-aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                      +|.+-                  .|              .+.....+  .... .|+++                     
T Consensus       280 tE~m~------------------~G--------------sLl~yLr~~~~~~l~~~~Ll---------------------  306 (468)
T KOG0197|consen  280 TEYMP------------------KG--------------SLLDYLRTREGGLLNLPQLL---------------------  306 (468)
T ss_pred             EEecc------------------cC--------------cHHHHhhhcCCCccchHHHH---------------------
Confidence            22211                  01              01111000  0000 00000                     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                           .+..|   ++++..|+.  ++++|||||-..|||+.   ....+||+|||||+.+..+.
T Consensus       307 ---------------------~~a~q---IaeGM~YLe--s~~~IHRDLAARNiLV~---~~~~vKIsDFGLAr~~~d~~  357 (468)
T KOG0197|consen  307 ---------------------DFAAQ---IAEGMAYLE--SKNYIHRDLAARNILVD---EDLVVKISDFGLARLIGDDE  357 (468)
T ss_pred             ---------------------HHHHH---HHHHHHHHH--hCCccchhhhhhheeec---cCceEEEcccccccccCCCc
Confidence                                 13344   788888999  99999999999999994   44569999999999544322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ...+  .     ..---.-|.|||.+.-      ..|+.++|+||+||+|+||.| |+.|+.+.+               
T Consensus       358 Y~~~--~-----~~kfPIkWtAPEa~~~------~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms---------------  409 (468)
T KOG0197|consen  358 YTAS--E-----GGKFPIKWTAPEALNY------GKFSSKSDVWSFGVLLWELFTYGRVPYPGMS---------------  409 (468)
T ss_pred             eeec--C-----CCCCCceecCHHHHhh------CCcccccceeehhhhHHHHhccCCCCCCCCC---------------
Confidence            1100  0     0011235999999972      468999999999999999988 999998764               


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                      ...+...+.+| +++|.+  ...++++-+++..|...+|++|||.+.+.
T Consensus       410 n~ev~~~le~G-yRlp~P--~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  410 NEEVLELLERG-YRLPRP--EGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHHHHHhcc-CcCCCC--CCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence            34466777766 566654  46899999999999999999999988554

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=2.9e-28  Score=243.25  Aligned_cols=264  Identities=22%  Similarity=0.251  Sum_probs=162.7

Q ss_pred             CceeceeCceEEEEEEEc----cCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNI----LTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~----~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||.||+|...    .++..||||++...... ....+.+|++++..+ .||||+++++++.......     
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~~~-----   82 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGGRS-----   82 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCCCc-----
Confidence            367999999999999854    34789999999754332 356788999999987 6999999998876532111     


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                              ..+           +.+|--+ +              .+..      |     +..    ...    .   +
T Consensus        83 --------~~l-----------v~e~~~~-~--------------~l~~------~-----l~~----~~~----~---~  106 (284)
T cd05038          83 --------LRL-----------IMEYLPS-G--------------SLRD------Y-----LQR----HRD----Q---I  106 (284)
T ss_pred             --------eEE-----------EEecCCC-C--------------CHHH------H-----HHh----Ccc----c---c
Confidence                    000           1111000 0              0000      0     000    000    0   0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      ....++                  .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++....
T Consensus       107 ~~~~~~------------------~~~~~---l~~aL~~lH--~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~  160 (284)
T cd05038         107 NLKRLL------------------LFSSQ---ICKGMDYLG--SQRYIHRDLAARNILVES---EDLVKISDFGLAKVLP  160 (284)
T ss_pred             CHHHHH------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHhEEEcC---CCCEEEcccccccccc
Confidence            000000                  02233   667778888  999999999999999953   4679999999987654


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .......     ......++..|+|||.+..      ..++.++|+||+||++|+|++|..||.........+. +....
T Consensus       161 ~~~~~~~-----~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~  228 (284)
T cd05038         161 EDKDYYY-----VKEPGESPIFWYAPECLRT------SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMI-GIAQG  228 (284)
T ss_pred             cCCccee-----ccCCCCCcccccCcHHHcc------CCCCcccchHHHhhhhheeeccCCCcccccchhcccc-ccccc
Confidence            2211000     0112245567999998853      3578899999999999999999999875432110000 00000


Q ss_pred             -hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 -ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 -~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                       .....+...+. ....++..  ...+.++.+|+.+||..||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         229 QMIVTRLLELLK-EGERLPRP--PSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cccHHHHHHHHH-cCCcCCCC--ccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence             00111122222 22233321  356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.95  E-value=6.2e-29  Score=245.87  Aligned_cols=245  Identities=24%  Similarity=0.357  Sum_probs=160.1

Q ss_pred             CceeceeCceEEEEEEEc----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNI----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||.|+||.||+|...    ..+..|+||+++.... .....+.+|++.+.++ +||||+++++++.......    +
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~----l   78 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLF----L   78 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEE----E
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-ccccccccccccccccccc----c
Confidence            357999999999999887    3456899999954222 2256788999999998 7999999999887433211    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC--CCcccccccccccCCCCCCCCcccc
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS--AEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt--~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                                            +.+|.-. +              .+...+..  .....+.                  
T Consensus        79 ----------------------v~e~~~~-g--------------~L~~~L~~~~~~~~~~~------------------  103 (259)
T PF07714_consen   79 ----------------------VMEYCPG-G--------------SLDDYLKSKNKEPLSEQ------------------  103 (259)
T ss_dssp             ----------------------EEE--TT-E--------------BHHHHHHHTCTTTSBHH------------------
T ss_pred             ----------------------ccccccc-c--------------ccccccccccccccccc------------------
Confidence                                  1122000 0              00000000  0000000                  


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                           . .+.                 |..+   ++.++.|+|  +++|+|+||++.|||++.   .+.+||+|||++..
T Consensus       104 -----~-~~~-----------------i~~~---i~~~l~~Lh--~~~iiH~~l~~~nill~~---~~~~Kl~~f~~~~~  152 (259)
T PF07714_consen  104 -----Q-RLS-----------------IAIQ---IAEALSYLH--SNNIIHGNLSPSNILLDS---NGQVKLSDFGLSRP  152 (259)
T ss_dssp             -----H-HHH-----------------HHHH---HHHHHHHHH--HTTEEEST-SGGGEEEET---TTEEEEESTTTGEE
T ss_pred             -----c-ccc-----------------cccc---ccccccccc--cccccccccccccccccc---cccccccccccccc
Confidence                 0 011                 2333   677888888  899999999999999964   34699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......      .......+...|+|||++..      ..++.++||||+|+++|+|++ |..||...+          
T Consensus       153 ~~~~~~~------~~~~~~~~~~~~~aPE~~~~------~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~----------  210 (259)
T PF07714_consen  153 ISEKSKY------KNDSSQQLPLRYLAPEVLKD------GEYTKKSDVYSFGMLLYEILTLGKFPFSDYD----------  210 (259)
T ss_dssp             TTTSSSE------EESTTSESGGGGS-HHHHHH------SEESHHHHHHHHHHHHHHHHTTSSGTTTTSC----------
T ss_pred             ccccccc------cccccccccccccccccccc------ccccccccccccccccccccccccccccccc----------
Confidence            4211110      01123456788999999874      348899999999999999999 789986542          


Q ss_pred             cchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ...+...+..+.. .+|    ..++....+||.+||..||++||++.++++
T Consensus       211 -----~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  211 -----NEEIIEKLKQGQRLPIP----DNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             -----HHHHHHHHHTTEETTSB----TTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             -----cccccccccccccceec----cchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                 2334555554433 223    357899999999999999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.95  E-value=5e-27  Score=227.31  Aligned_cols=243  Identities=38%  Similarity=0.582  Sum_probs=168.2

Q ss_pred             CceEEEEEEEccCCcEEEEEEeccCCCCC-HHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCCCCCee
Q psy16343         60 AYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENIL  138 (539)
Q Consensus        60 ~fG~V~~~~~~~t~~~vAvK~i~k~~~~~-~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~enil  138 (539)
                      +||.||+|....+++.+|+|++....... ...+.+|++.++++ +|+||+++++++......+               +
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~---------------l   64 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLY---------------L   64 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEE---------------E
Confidence            58999999999899999999997544333 57788999999987 6999999998876542221               1


Q ss_pred             ccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHh
Q psy16343        139 CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC  218 (539)
Q Consensus       139 l~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~llt  218 (539)
                                 +.+|--+ +              .+...+........                 ..+|.          
T Consensus        65 -----------~~e~~~~-~--------------~L~~~~~~~~~~~~-----------------~~~~~----------   91 (244)
T smart00220       65 -----------VMEYCDG-G--------------DLFDLLKKRGRLSE-----------------DEARF----------   91 (244)
T ss_pred             -----------EEeCCCC-C--------------CHHHHHHhccCCCH-----------------HHHHH----------
Confidence                       1111000 0              00000000000000                 00010          


Q ss_pred             CCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCC
Q psy16343        219 GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT  298 (539)
Q Consensus       219 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~  298 (539)
                                    +..+   ++.++.++|  +.||+|+||+|.||++..   .+.++|+|||++.......        
T Consensus        92 --------------~~~~---l~~~l~~lh--~~~i~h~~i~~~ni~~~~---~~~~~l~d~~~~~~~~~~~--------  141 (244)
T smart00220       92 --------------YARQ---ILSALEYLH--SNGIIHRDLKPENILLDE---DGHVKLADFGLARQLDPGG--------  141 (244)
T ss_pred             --------------HHHH---HHHHHHHHH--HcCeecCCcCHHHeEECC---CCcEEEccccceeeecccc--------
Confidence                          2222   556677777  889999999999999954   3679999999987543321        


Q ss_pred             CCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHh
Q psy16343        299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ  378 (539)
Q Consensus       299 ~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~  378 (539)
                       .....+|+..|++||.+..      ..++.++|+||+|+++|+|++|..||.....              ...+...+.
T Consensus       142 -~~~~~~~~~~~~~pE~~~~------~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--------------~~~~~~~~~  200 (244)
T smart00220      142 -LLTTFVGTPEYMAPEVLLG------KGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--------------LLELFKKIG  200 (244)
T ss_pred             -ccccccCCcCCCCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------------HHHHHHHHh
Confidence             1234578999999999862      4578899999999999999999999976311              233455555


Q ss_pred             cCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        379 QGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       379 ~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      .+.+..... +..++.++.++|.+||..||++||++.++++||||
T Consensus       201 ~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      201 KPKPPFPPP-EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             ccCCCCccc-cccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            555444322 22378999999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0984|consensus

Probab=99.95  E-value=6.4e-28  Score=218.36  Aligned_cols=224  Identities=24%  Similarity=0.327  Sum_probs=148.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEecc-CCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k-~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||+|-+-++..+|...|+|.|.. .+.....+.++|+.+..++.++|.+|.++..+-+.....    |    
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw----I----  122 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW----I----  122 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE----E----
Confidence            4579999999999999999999999999953 233445678899999998889999999997554332211    0    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                       .+|-+-.              .+..                +...+-..+-.-||.+.                     
T Consensus       123 -cME~M~t--------------Sldk----------------fy~~v~~~g~~ipE~vl---------------------  150 (282)
T KOG0984|consen  123 -CMELMDT--------------SLDK----------------FYRKVLKKGGTIPEDVL---------------------  150 (282)
T ss_pred             -eHHHhhh--------------hHHH----------------HHHHHHhcCCcCchHHh---------------------
Confidence             0221110              0000                00000000111233221                     


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                             |+            +.   .++..|+.|+|. +..|||||+||.|||+   +..|.+||||||.+..+.....
T Consensus       151 -------Gk------------Ia---~Svv~al~~L~~-kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~dSiA  204 (282)
T KOG0984|consen  151 -------GK------------IA---VSVVHALEFLHS-KLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLVDSIA  204 (282)
T ss_pred             -------hH------------hH---HHHHHHHHHHHH-HhhhhhccCCcceEEE---ccCCcEEEcccccceeehhhhH
Confidence                   11            11   125667777774 4689999999999999   5667799999999765432211


Q ss_pred             CCCCCCCCCccc-cccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        292 VHSPLATPLLLT-PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       292 ~~~~~~~~~~~t-~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                                .| -.|.-.|||||.+....  ...+|+-++|+||||+.+.||.+++.|+..-             .++.
T Consensus       205 ----------kt~daGCkpYmaPEri~~e~--n~~gY~vksDvWSLGItmiElA~lr~PY~~w-------------~tpF  259 (282)
T KOG0984|consen  205 ----------KTMDAGCKPYMAPERINPEL--NQKGYSVKSDVWSLGITMIEMAILRFPYESW-------------GTPF  259 (282)
T ss_pred             ----------HHHhcCCCccCChhhcCccc--Ccccceeehhhhhhhhhhhhhhhcccccccc-------------CCHH
Confidence                      12 36788999999997422  2348999999999999999999999999642             1234


Q ss_pred             HHHHHHHhcCCCCCCCC
Q psy16343        371 EILFHSIQQGHYDFPEG  387 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~  387 (539)
                      +.+.+.+....+.+|..
T Consensus       260 ~qLkqvVeep~P~Lp~~  276 (282)
T KOG0984|consen  260 QQLKQVVEEPSPQLPAD  276 (282)
T ss_pred             HHHHHHhcCCCCCCccc
Confidence            44555555666666654

>KOG1187|consensus

Probab=99.95  E-value=2e-27  Score=244.55  Aligned_cols=256  Identities=25%  Similarity=0.354  Sum_probs=156.0

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc-ccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN-HERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~-~~~~~~IiHrD  131 (539)
                      ..+||+|+||.||+|... .|..||||.+.........++.+|++++.++. |||||+|++||.+... ..         
T Consensus        80 ~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~---------  148 (361)
T KOG1187|consen   80 SNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRL---------  148 (361)
T ss_pred             hcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEE---------
Confidence            368999999999999864 44889999886533221455999999999986 9999999999987653 11         


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                            |+           .+|  ..    +                |+        +....-.....    .--|..= 
T Consensus       149 ------LV-----------YEy--m~----n----------------Gs--------L~d~L~~~~~~----~L~W~~R-  176 (361)
T KOG1187|consen  149 ------LV-----------YEY--MP----N----------------GS--------LEDHLHGKKGE----PLDWETR-  176 (361)
T ss_pred             ------EE-----------EEc--cC----C----------------CC--------HHHHhCCCCCC----CCCHHHH-
Confidence                  11           111  00    0                00        00000000000    0011100 


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCcccccc-C
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF-N  289 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~-~  289 (539)
                        +.                 +...   ++.++.|+|-... -||||||||.|||+   |.+...||+|||+|+.... .
T Consensus       177 --~k-----------------Ia~g---~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~~~~~  231 (361)
T KOG1187|consen  177 --LK-----------------IALG---AARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLGPEGD  231 (361)
T ss_pred             --HH-----------------HHHH---HHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccCCccc
Confidence              00                 1111   5677788883222 49999999999999   4556789999999965432 1


Q ss_pred             CCCCCCCCCCCcccc-ccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        290 TSVHSPLATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~-~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ..         ..+. .||..|+|||.+..      ...+.++|+||+||+|.||++|+.|.........      ..  
T Consensus       232 ~~---------~~~~~~gt~gY~~PEy~~~------g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~------~~--  288 (361)
T KOG1187|consen  232 TS---------VSTTVMGTFGYLAPEYAST------GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE------LS--  288 (361)
T ss_pred             cc---------eeeecCCCCccCChhhhcc------CCcCcccccccchHHHHHHHhCCcccCCCCCccc------cc--
Confidence            11         1222 79999999999852      2467899999999999999999988865321110      00  


Q ss_pred             hHHHHHHHHhcCC------CCCCCCCCC--CCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        369 CQEILFHSIQQGH------YDFPEGEWS--TISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       369 ~~~~~~~~i~~~~------~~~p~~~~~--~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      -.+-....+..+.      ..+....+.  ..-..+..+..+|+..+|.+||++.|+.+
T Consensus       289 l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  289 LVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            0010112222221      111111111  01123557788999999999999998743

>KOG0590|consensus

Probab=99.94  E-value=1.5e-28  Score=267.13  Aligned_cols=340  Identities=27%  Similarity=0.417  Sum_probs=229.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEc-cCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc--
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNI-LTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN--  120 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~-~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~--  120 (539)
                      ...|.+ .+.||+|+|+.|..+... .+...+|+|.+....  .....+...|..+-..+.+|+|++.+++...+...  
T Consensus        19 ~~~~~~-~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   19 NSQYKL-SRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             cccccc-cccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            344554 345899999999887763 344567888876443  12223344566665555569999998765433211  


Q ss_pred             ----------------------------------------ccc-cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccC
Q psy16343        121 ----------------------------------------HER-HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  159 (539)
Q Consensus       121 ----------------------------------------~~~-~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~  159 (539)
                                                              +.| ..++.|||+||+|.++...+.  .++++|||++...
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~--~l~~~df~~At~~  175 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS--ALKIADFGLATAY  175 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC--cccCCCchhhccc
Confidence                                                    235 567999999999999854442  7899999998665


Q ss_pred             cC-CCCCCCCCCCCCccCCCC-CCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCC--------
Q psy16343        160 KF-NTSVHSPLATPLLLTPVG-SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE--------  229 (539)
Q Consensus       160 ~~-~~~~~~~~~~~~l~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~--------  229 (539)
                      .. .....      .+...+| ++.|+|||....     ........|+||.|+++..+++|..|+......        
T Consensus       176 ~~~~g~~~------~~~~~~g~s~~y~a~E~~~~-----~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~  244 (601)
T KOG0590|consen  176 RNKNGAER------SLKDRCGSSPPYGAPEHLSG-----KAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK  244 (601)
T ss_pred             cccCCcce------eeecccCCCCCCCCcccccc-----hhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence            44 22111      3345678 999999998743     123457799999999999988877764200000        


Q ss_pred             ----------------------------------------------C----------C----------------------
Q psy16343        230 ----------------------------------------------D----------C----------------------  231 (539)
Q Consensus       230 ----------------------------------------------~----------~----------------------  231 (539)
                                                                    .          +                      
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~y~~~~~  324 (601)
T KOG0590|consen  245 SNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSSKRNGFSKSNPCADSLTIAKSPIGFSEKYGKPGR  324 (601)
T ss_pred             ccccccccCccccCChhhhhcccccccCCchhccccccccccccccccccccccccccccccccccCccccccccCCccc
Confidence                                                          0          0                      


Q ss_pred             -------C---------------c--cC---------------------------c--------------------ccc-
Q psy16343        232 -------G---------------W--QR---------------------------G--------------------ETC-  239 (539)
Q Consensus       232 -------~---------------~--~~---------------------------~--------------------~~~-  239 (539)
                             +               +  .+                           +                    +.| 
T Consensus       325 ~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~  404 (601)
T KOG0590|consen  325 VLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCP  404 (601)
T ss_pred             eeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhccc
Confidence                   0               0  00                           0                    000 


Q ss_pred             ------------------------chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCC
Q psy16343        240 ------------------------HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP  295 (539)
Q Consensus       240 ------------------------~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~  295 (539)
                                              ++.++.|+|  ..||.||||||||+|+..   .+.+||+|||.+..+......   
T Consensus       405 ~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h--~~GiahrdlK~enll~~~---~g~lki~Dfg~~~vf~~~~e~---  476 (601)
T KOG0590|consen  405 YDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLH--SMGLAHRDLKLENLLVTE---NGILKIIDFGAASVFRYPWEK---  476 (601)
T ss_pred             HHHHHHHhcccccchhhhhHHHHHHHHHHHHHH--hcCceeccCccccEEEec---CCceEEeecCcceeeccCcch---
Confidence                                    112345667  999999999999999954   457999999998765433211   


Q ss_pred             CCCCCccccccCcccccchhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHH
Q psy16343        296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF  374 (539)
Q Consensus       296 ~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~  374 (539)
                       ........||+..|+|||++..      ..|+ ..+||||+|+|++.|++|+.||.-....+..+             .
T Consensus       477 -~~~~~~g~~gS~pY~apE~~~~------~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------------~  536 (601)
T KOG0590|consen  477 -NIHESSGIVGSDPYLAPEVLTG------KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------------K  536 (601)
T ss_pred             -hhhhhcCcccCCcCcCcccccc------cccCcchhhhhhccceEEEEecCCCccccccccccch-------------h
Confidence             0124567899999999999974      4687 57999999999999999999998665443221             0


Q ss_pred             HHHhcCCCC---CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        375 HSIQQGHYD---FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       375 ~~i~~~~~~---~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..-......   =|...|..++.+.+.+|.+||++||.+|+|+++|++.+||+...
T Consensus       537 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  537 TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            000001111   12223567888999999999999999999999999999998654

>KOG1152|consensus

Probab=99.94  E-value=3.5e-28  Score=248.26  Aligned_cols=195  Identities=29%  Similarity=0.450  Sum_probs=139.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--------CHHHHHHHHHHHHhhc--CCCCeeeeeeeeccccccc
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--------SRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--------~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~~~~~  122 (539)
                      -+.||+|+||.|.+|.++....+|.||.|.|...-        ..-.+.-||+||..+.  .|+||++++++|++.++++
T Consensus       566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy  645 (772)
T KOG1152|consen  566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY  645 (772)
T ss_pred             eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence            46799999999999999999999999999764221        1123456999998864  3999999999999998887


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ....+ |+               ..+.|.|                        .+.-        .....|+++.-   
T Consensus       646 l~te~-hg---------------~gIDLFd------------------------~IE~--------kp~m~E~eAk~---  674 (772)
T KOG1152|consen  646 LETEV-HG---------------EGIDLFD------------------------FIEF--------KPRMDEPEAKL---  674 (772)
T ss_pred             EEecC-CC---------------CCcchhh------------------------hhhc--------cCccchHHHHH---
Confidence            32221 10               0012222                        2211        00111112211   


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                    +++|   ++.++.  |+|++||||||||-||+.+   +..|.+||+|||-
T Consensus       675 ------------------------------IFkQ---V~agi~--hlh~~~ivhrdikdenviv---d~~g~~klidfgs  716 (772)
T KOG1152|consen  675 ------------------------------IFKQ---VVAGIK--HLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGS  716 (772)
T ss_pred             ------------------------------HHHH---HHhccc--cccccCceecccccccEEE---ecCCeEEEeeccc
Confidence                                          4555   554454  5559999999999999999   5667899999998


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCC-CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY-DKRCDLWSLGVVVYILLCGYPPFYG  352 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y-~~~~DiWSlGvily~ll~G~~PF~~  352 (539)
                      |...+.+          ...+++||..|.|||++.+      ..| ++.-|||+||++||..+...-||+.
T Consensus       717 aa~~ksg----------pfd~f~gtv~~aapevl~g------~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  717 AAYTKSG----------PFDVFVGTVDYAAPEVLGG------EKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhhhcCC----------CcceeeeeccccchhhhCC------CccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            7654322          3458999999999999974      345 5789999999999999999999874

>KOG1026|consensus

Probab=99.94  E-value=1.4e-27  Score=255.79  Aligned_cols=257  Identities=23%  Similarity=0.357  Sum_probs=177.0

Q ss_pred             ceeceeCceEEEEEEEcc-----CCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC-
Q psy16343         54 EILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR-  126 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~-----t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~-  126 (539)
                      +.||+|+||+||+|....     ....||||.++..... .+.+|.||+++|..+ +|||||+|++++..++-++-... 
T Consensus       492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~~MvFEY  570 (774)
T KOG1026|consen  492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPLCMVFEY  570 (774)
T ss_pred             hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCeeEEEEEe
Confidence            569999999999997532     3457999999765444 678899999999997 59999999999988876541111 


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +.|+||+ | +|..+...                ....            .-|..  +.|++-.                
T Consensus       571 m~~GDL~-e-FLra~sP~----------------a~~~------------~~g~~--~~~~L~~----------------  602 (774)
T KOG1026|consen  571 MDHGDLH-E-FLRARSPK----------------ADKL------------ASGQD--TPPPLST----------------  602 (774)
T ss_pred             cccccHH-H-HHHhhCCc----------------cccc------------cCCCC--CCCCCCH----------------
Confidence            3466664 1 22110000                0000            00000  1111100                


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                             .++|              .+..|   ++.+..|+-  ++..|||||-..|+|+   +....|||+||||++.+
T Consensus       603 -------~q~L--------------~iA~Q---IAaGM~YLs--~~~FVHRDLATRNCLV---ge~l~VKIsDfGLsRdi  653 (774)
T KOG1026|consen  603 -------SQFL--------------HIATQ---IAAGMEYLS--SHHFVHRDLATRNCLV---GENLVVKISDFGLSRDI  653 (774)
T ss_pred             -------HHHH--------------HHHHH---HHHHHHHHH--hCcccccchhhhhcee---ccceEEEecccccchhh
Confidence                   0011              13444   667777877  8899999999999999   45567999999999853


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                       +...++.....    + .--.-||+||-|.      ...|+..+||||+||+|.|+.+ |..|++|-+           
T Consensus       654 -YssDYYk~~~~----t-~lPIRWMppEsIl------y~kFTteSDVWs~GVvLWEIFsyG~QPy~glS-----------  710 (774)
T KOG1026|consen  654 -YSSDYYKVRGN----T-LLPIRWMPPESIL------YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS-----------  710 (774)
T ss_pred             -hhhhhhcccCC----c-eeeeecCCHHHhh------cCcccchhhhhhhhhhhhhhhccccCcccccc-----------
Confidence             22221111000    0 0123699999886      3569999999999999999986 999999864           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                          .++..+.|++|.. ++-+  .+.+.++-+|+..|.+.+|++||+..||-
T Consensus       711 ----n~EVIe~i~~g~l-L~~P--e~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  711 ----NQEVIECIRAGQL-LSCP--ENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             ----hHHHHHHHHcCCc-ccCC--CCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence                2457788999887 5543  36899999999999999999999998863

>KOG0576|consensus

Probab=99.94  E-value=1.6e-27  Score=247.12  Aligned_cols=263  Identities=27%  Similarity=0.449  Sum_probs=178.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      =+|.|++. ..+|.|+||.|||++++.+++..|||+++-.......-+.+|+-+++.|. |||||-++..|-......  
T Consensus        13 P~ddyell-qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dklw--   88 (829)
T KOG0576|consen   13 PQDDYELL-QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLW--   88 (829)
T ss_pred             Cccchhhe-eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC-CcChHHHHhhhhhhcCcE--
Confidence            36677764 56899999999999999999999999997655555556778998999885 999999887664433221  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        |                      ..||+=+....            ......|..    -|....+            
T Consensus        89 --i----------------------cMEycgggslQ------------diy~~Tgpl----selqiay------------  116 (829)
T KOG0576|consen   89 --I----------------------CMEYCGGGSLQ------------DIYHVTGPL----SELQIAY------------  116 (829)
T ss_pred             --E----------------------EEEecCCCccc------------ceeeecccc----hhHHHHH------------
Confidence              1                      01221110100            000000100    0000000            


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                                  +.|+   .+.++.|+|  ++|=+|||||-.|||+++.   +.+|++|||.+.
T Consensus       117 ----------------------------vcRe---tl~gl~ylh--s~gk~hRdiKGanilltd~---gDvklaDfgvsa  160 (829)
T KOG0576|consen  117 ----------------------------VCRE---TLQGLKYLH--SQGKIHRDIKGANILLTDE---GDVKLADFGVSA  160 (829)
T ss_pred             ----------------------------HHhh---hhccchhhh--cCCcccccccccceeeccc---CceeecccCchh
Confidence                                        1222   344567788  9999999999999999654   459999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+.....        .-..+.|||+||||||-.-  + ...+|+..||+|++|+...++.--++|-....+         
T Consensus       161 qitati~--------KrksfiGtpywmapEvaav--e-rkggynqlcdiwa~gitAiel~eLqpplfdlhp---------  220 (829)
T KOG0576|consen  161 QITATIA--------KRKSFIGTPYWMAPEVAAV--E-RKGGYNQLCDIWALGITAIELGELQPPLFDLHP---------  220 (829)
T ss_pred             hhhhhhh--------hhhcccCCccccchhHHHH--H-hcccccccccccccccchhhhhhcCCcccccch---------
Confidence            6543221        2347899999999998742  1 245799999999999999999888888654321         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCC-CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEG-EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~-~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                           ...++-.-.++ |.-|.- .-...++.+-+|++.+|.++|++||+++.+|.|||+..
T Consensus       221 -----mr~l~LmTkS~-~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  221 -----MRALFLMTKSG-FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             -----HHHHHHhhccC-CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence                 22333322222 322221 11245889999999999999999999999999999863

>KOG1290|consensus

Probab=99.93  E-value=2.2e-26  Score=231.51  Aligned_cols=136  Identities=26%  Similarity=0.430  Sum_probs=93.1

Q ss_pred             CCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCC
Q psy16343        270 DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP  349 (539)
Q Consensus       270 ~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~P  349 (539)
                      ...-.+||+|||=|......           .+.-+-|..|+|||||.+      .+|+..+||||.+|+.+||+||...
T Consensus       388 ~~di~vKIaDlGNACW~~kh-----------FT~DIQTRQYRapEVllG------sgY~~~ADiWS~AC~~FELaTGDyL  450 (590)
T KOG1290|consen  388 ECDIRVKIADLGNACWVHKH-----------FTEDIQTRQYRAPEVLLG------SGYSTSADIWSTACMAFELATGDYL  450 (590)
T ss_pred             ccceeEEEeeccchhhhhhh-----------hchhhhhhhccCcceeec------CCCCCchhHHHHHHHHHHhhcCcee
Confidence            33456899999988743211           223467999999999984      6899999999999999999999999


Q ss_pred             CCCCCCCCCCcccCccchhhHHHH-----HHHHhcCCC------------------------------CCCCCCCCCCCH
Q psy16343        350 FYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGHY------------------------------DFPEGEWSTISD  394 (539)
Q Consensus       350 F~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~------------------------------~~p~~~~~~~s~  394 (539)
                      |......+.  .+.+.--+...++     ...+..|.+                              .|+.    .-..
T Consensus       451 FePhsG~~Y--~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~----e~A~  524 (590)
T KOG1290|consen  451 FEPHSGENY--SRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSE----EDAQ  524 (590)
T ss_pred             ecCCCCCCC--CccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCH----HHHH
Confidence            987665542  2211100000011     111222322                              2221    1235


Q ss_pred             HHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        395 EAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       395 ~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ++.|||.-||+.+|.+|+||.++|+|||+.....
T Consensus       525 ~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  525 QFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             HHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence            6779999999999999999999999999986544

>KOG0194|consensus

Probab=99.93  E-value=1.5e-26  Score=240.24  Aligned_cols=243  Identities=22%  Similarity=0.304  Sum_probs=164.4

Q ss_pred             CceeceeCceEEEEEEEccCCc---E-EEEEEecc---CCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         53 GEILGKGAYASVQTCVNILTEL---E-YAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~---~-vAvK~i~k---~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      ++.||+|+||.||+|..+..+.   . ||||..+.   ........+++|.++|+.+ +|||||+++++..+..-.+   
T Consensus       162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl~---  237 (474)
T KOG0194|consen  162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPLM---  237 (474)
T ss_pred             cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCccE---
Confidence            4789999999999998776432   3 89998864   2233456789999999995 6999999998776554332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCccc-ccccccccCCCCCCCCcc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMA-PEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~a-PE~~~~~~~~~~~~~~~~  203 (539)
                                 |++         -+|+-|   .               +.+.... ...+. .|.+              
T Consensus       238 -----------ivm---------El~~gG---s---------------L~~~L~k~~~~v~~~ek~--------------  265 (474)
T KOG0194|consen  238 -----------LVM---------ELCNGG---S---------------LDDYLKKNKKSLPTLEKL--------------  265 (474)
T ss_pred             -----------EEE---------EecCCC---c---------------HHHHHHhCCCCCCHHHHH--------------
Confidence                       221         122111   0               0000000 00000 0000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                 .                 +..+   .++++.|+|  ++++|||||=..|+|+...   ..+||+||||+
T Consensus       266 -----------~-----------------~~~~---AA~Gl~YLh--~k~~IHRDIAARNcL~~~~---~~vKISDFGLs  309 (474)
T KOG0194|consen  266 -----------R-----------------FCYD---AARGLEYLH--SKNCIHRDIAARNCLYSKK---GVVKISDFGLS  309 (474)
T ss_pred             -----------H-----------------HHHH---HHhHHHHHH--HCCCcchhHhHHHheecCC---CeEEeCccccc
Confidence                       0                 0111   456777877  9999999999999999543   34799999998


Q ss_pred             cccccCCCCCCCCCCCCccccc-cCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~-GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      +....-..         ....+ --.-|+|||.+..      .-|+.++||||+||++||..+ |..||.|..       
T Consensus       310 ~~~~~~~~---------~~~~~klPirWLAPEtl~~------~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~-------  367 (474)
T KOG0194|consen  310 RAGSQYVM---------KKFLKKLPIRWLAPETLNT------GIFSFKTDVWSFGVLLWEIFENGAEPYPGMK-------  367 (474)
T ss_pred             cCCcceee---------ccccccCcceecChhhhcc------CccccccchhheeeeEEeeeccCCCCCCCCC-------
Confidence            75421000         00011 2246999999974      369999999999999999988 889998864       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              ...+...|....+..+.+  ...+.+...++.+|...||+.|+++.++.+
T Consensus       368 --------~~~v~~kI~~~~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  368 --------NYEVKAKIVKNGYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             --------HHHHHHHHHhcCccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence                    234667775555555543  356789999999999999999999988764

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.93  E-value=6.9e-26  Score=264.14  Aligned_cols=244  Identities=19%  Similarity=0.220  Sum_probs=152.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .++||+|+||.||+|+...++..||||.++.....    ...|++++.++ +|||||++++++.+....+   .|     
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~---lv-----  761 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKL-QHPNIVKLIGLCRSEKGAY---LI-----  761 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhC-CCCCcceEEEEEEcCCCCE---EE-----
Confidence            45899999999999999999999999998653321    23568888886 6999999999997654322   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|.+-                 + +              .+...+..           +            + |..   
T Consensus       762 -~Ey~~-----------------~-g--------------~L~~~l~~-----------l------------~-~~~---  781 (968)
T PLN00113        762 -HEYIE-----------------G-K--------------NLSEVLRN-----------L------------S-WER---  781 (968)
T ss_pred             -EeCCC-----------------C-C--------------cHHHHHhc-----------C------------C-HHH---
Confidence             11110                 0 0              00000000           0            0 000   


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhh-hhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h-~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                       ...+..+   ++.++.|+|.+ +.+|+||||||+|||+..+   ...+++ ||.+.....   
T Consensus       782 -----------------~~~i~~~---ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~---~~~~~~-~~~~~~~~~---  834 (968)
T PLN00113        782 -----------------RRKIAIG---IAKALRFLHCRCSPAVVVGNLSPEKIIIDGK---DEPHLR-LSLPGLLCT---  834 (968)
T ss_pred             -----------------HHHHHHH---HHHHHHHhccCCCCCeecCCCCHHhEEECCC---CceEEE-ecccccccc---
Confidence                             0003334   67788888855 6799999999999999543   334554 665432211   


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                               ..+..||+.|||||++..      ..|+.++||||+||++|||++|+.||..........         .+
T Consensus       835 ---------~~~~~~t~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~---------~~  890 (968)
T PLN00113        835 ---------DTKCFISSAYVAPETRET------KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSI---------VE  890 (968)
T ss_pred             ---------CCCccccccccCcccccC------CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcH---------HH
Confidence                     113478999999999853      468999999999999999999999995432111000         00


Q ss_pred             HHHHHHhcC------CCCCCCC--CCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        372 ILFHSIQQG------HYDFPEG--EWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       372 ~~~~~i~~~------~~~~p~~--~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      .........      .......  .-.....++.+++.+|+..||++|||++|+++.
T Consensus       891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        891 WARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            000000000      0001000  000112367789999999999999999999865

>KOG1095|consensus

Probab=99.93  E-value=1.2e-25  Score=248.97  Aligned_cols=250  Identities=23%  Similarity=0.334  Sum_probs=165.8

Q ss_pred             CceeceeCceEEEEEEEccCC-----cEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         53 GEILGKGAYASVQTCVNILTE-----LEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~-----~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .+.||+|+||.||.|....-.     ..||||.+.+.. .....++++|..+|.++ +|||||+|++++-+....+....
T Consensus       697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~~~~i~le  775 (1025)
T KOG1095|consen  697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSGPPLILLE  775 (1025)
T ss_pred             eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCCCcEEEeh
Confidence            568999999999999865432     349999997653 33456799999999997 69999999998866433220000


Q ss_pred             -eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       127 -IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                       .-|+||+.                       .++..+                ...|.+.. +            .-.|
T Consensus       776 yM~gGDL~s-----------------------flr~~r----------------~~~~~~~~-L------------~~~d  803 (1025)
T KOG1095|consen  776 YMEGGDLLS-----------------------FLRESR----------------PAPFQPSN-L------------SMRD  803 (1025)
T ss_pred             hcccCcHHH-----------------------HHHhcc----------------cccCCCCC-C------------CHHH
Confidence             01122210                       000000                00000000 0            0012


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      .-+|                        -.+   ++.+..|++  +++.|||||-..|+|++   ....+||+|||||+.
T Consensus       804 Ll~~------------------------a~d---vA~G~~YLe--~~~fvHRDLAaRNCLL~---~~r~VKIaDFGlArD  851 (1025)
T KOG1095|consen  804 LLAF------------------------ALD---VAKGMNYLE--SKHFVHRDLAARNCLLD---ERRVVKIADFGLARD  851 (1025)
T ss_pred             HHHH------------------------HHH---HhhhhHHHH--hCCCcCcchhhhheeec---ccCcEEEcccchhHh
Confidence            2111                        112   556667777  99999999999999995   446799999999984


Q ss_pred             cccCCCCCCCCCCCCccccccC--cccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGS--AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT--~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      +-. ..+.....       .+.  .-|||||.+..      ..|+.++||||+||+++|+++ |.+||.+.+.       
T Consensus       852 iy~-~~yyr~~~-------~a~lPvkWm~PEsl~d------~iFtskSDvWsFGVllWEifslG~~PY~~~~n-------  910 (1025)
T KOG1095|consen  852 IYD-KDYYRKHG-------EAMLPVKWMPPESLKD------GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-------  910 (1025)
T ss_pred             hhh-chheeccC-------ccccceecCCHHHHhh------cccccccchhhhHHHHHHHHhCCCCCCCCcch-------
Confidence            322 11111100       122  25999999973      468999999999999999998 9999987642       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             .+.+......|....|.    ..++..-+++..|+..||++||+...+++
T Consensus       911 -------~~v~~~~~~ggRL~~P~----~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  911 -------FEVLLDVLEGGRLDPPS----YCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             -------HHHHHHHHhCCccCCCC----CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence                   23333345556554443    57888899999999999999999999887

>KOG1345|consensus

Probab=99.93  E-value=9.2e-27  Score=218.70  Aligned_cols=269  Identities=21%  Similarity=0.336  Sum_probs=180.0

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeee-eccc
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEY-YEDD  118 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~-~~~~  118 (539)
                      +..-.|.|.|.+ .+.||+|-||.+.+|.|+.+...+++|.+.+. .....++.+|..--..+..|.|||.-+++ |+..
T Consensus        17 l~kv~l~d~y~I-~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~   94 (378)
T KOG1345|consen   17 LKKVDLEDVYTI-NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS   94 (378)
T ss_pred             ccccchhhhhhH-HHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcC
Confidence            345568899987 57899999999999999999999999999753 33467788888765566679999988765 4443


Q ss_pred             ccccccCCee-eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        119 ENHERHKRIA-HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       119 ~~~~~~~~Ii-HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      +.+...+... .+|| .+||-             +-|++                       .                 
T Consensus        95 d~YvF~qE~aP~gdL-~snv~-------------~~Gig-----------------------E-----------------  120 (378)
T KOG1345|consen   95 DAYVFVQEFAPRGDL-RSNVE-------------AAGIG-----------------------E-----------------  120 (378)
T ss_pred             ceEEEeeccCccchh-hhhcC-------------ccccc-----------------------H-----------------
Confidence            3222110000 0111 01110             00000                       0                 


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                       .++.                             -+..|   +.+|+.|+|  ++++||||||.||||+.+.+.. .|||
T Consensus       121 -~~~K-----------------------------~v~~q---l~SAi~fMH--sknlVHRdlK~eNiLif~~df~-rvKl  164 (378)
T KOG1345|consen  121 -ANTK-----------------------------KVFAQ---LLSAIEFMH--SKNLVHRDLKAENILIFDADFY-RVKL  164 (378)
T ss_pred             -HHHH-----------------------------HHHHH---HHHHHHHhh--ccchhhcccccceEEEecCCcc-EEEe
Confidence             0000                             03344   778999999  9999999999999999876654 7999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      ||||+.+.....           ....-.+..|-+||++.-. ..+.-..+...|+|.+|+|+|..|+|.+||+.....|
T Consensus       165 cDFG~t~k~g~t-----------V~~~~~~~~y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d  232 (378)
T KOG1345|consen  165 CDFGLTRKVGTT-----------VKYLEYVNNYHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD  232 (378)
T ss_pred             eecccccccCce-----------ehhhhhhcccCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcchhhhccC
Confidence            999987643221           1122346789999988642 1122234678999999999999999999998654333


Q ss_pred             CCcccCccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCC---CCHHHHhcCCCcc
Q psy16343        358 CGWQRGETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKR---LSAASVLKHPWIS  424 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R---~ta~e~l~Hpw~~  424 (539)
                      ..+           .-+.....+ ....|. .+..+|+.|..+.++-|..+|++|   .++..-..-.|+.
T Consensus       233 ~~Y-----------~~~~~w~~rk~~~~P~-~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  233 KPY-----------WEWEQWLKRKNPALPK-KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             chH-----------HHHHHHhcccCccCch-hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            211           122222322 334443 456789999999999999999999   4566666677764

>KOG0606|consensus

Probab=99.92  E-value=7.2e-26  Score=245.96  Aligned_cols=162  Identities=31%  Similarity=0.560  Sum_probs=130.6

Q ss_pred             hhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC--CCC---CCC--CccccccCcccccc
Q psy16343        241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH--SPL---ATP--LLLTPVGSAEFMAP  313 (539)
Q Consensus       241 ~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~--~~~---~~~--~~~t~~GT~~Y~AP  313 (539)
                      +.++.|+|  +-||+|||+||+|+|++   ..|.+|+.|||+++..-......  ...   .+.  .-...||||.|+||
T Consensus       153 vla~Eylh--~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  153 VLAVEYLH--SYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hHHhHhhc--cCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            45678888  99999999999999995   45679999999986432221100  000   000  11245999999999


Q ss_pred             hhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCC
Q psy16343        314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTIS  393 (539)
Q Consensus       314 Evl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s  393 (539)
                      ||+..      ++|++.||||++|+|+|+.|-|..||.|++               .++++..+......+|+..| .+.
T Consensus       228 eVilr------qgygkpvdwwamGiIlyeFLVgcvpffGdt---------------peelfg~visd~i~wpE~de-a~p  285 (1205)
T KOG0606|consen  228 EVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDT---------------PEELFGQVISDDIEWPEEDE-ALP  285 (1205)
T ss_pred             hhhhh------hccCCCccHHHHHHHHHHHheeeeeccCCC---------------HHHHHhhhhhhhccccccCc-CCC
Confidence            99974      689999999999999999999999999986               46788888888899998854 678


Q ss_pred             HHHHHHHHHhccccccCCCC---HHHHhcCCCccCCCCC
Q psy16343        394 DEAKDLIRRLLVKDARKRLS---AASVLKHPWISTAGTA  429 (539)
Q Consensus       394 ~~~~dli~~lL~~dP~~R~t---a~e~l~Hpw~~~~~~~  429 (539)
                      +|++|+|.+||+.+|..|..   +-++.+|+||...+|.
T Consensus       286 ~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  286 PEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             HHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence            99999999999999999984   6789999999887764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=7.1e-26  Score=257.90  Aligned_cols=163  Identities=17%  Similarity=0.170  Sum_probs=113.2

Q ss_pred             ccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC----------------CCCCCceeccCCCccccccCCC-----
Q psy16343        233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP----------------DQLSPVKLCDFDLGSGIKFNTS-----  291 (539)
Q Consensus       233 ~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~----------------~~~~~ikl~DFGla~~~~~~~~-----  291 (539)
                      +++|   ++.++.|+|  ++|||||||||+|||+...                +..+.+||+|||+++.......     
T Consensus        85 i~~q---i~~al~~lH--~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~  159 (793)
T PLN00181         85 VFRQ---IVEIVNAAH--SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEK  159 (793)
T ss_pred             HHHH---HHHHHHHHH--hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhh
Confidence            4555   778889998  9999999999999999531                2345688889998864321000     


Q ss_pred             ---CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        292 ---VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       292 ---~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                         .............+||++|||||++.+      ..|+.++||||+||+||||++|.+||....              
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------------  219 (793)
T PLN00181        160 LEEVKKQPFPMKQILAMEMSWYTSPEEDNG------SSSNCASDVYRLGVLLFELFCPVSSREEKS--------------  219 (793)
T ss_pred             hhccccCCCcccccccCCCcceEChhhhcc------CCCCchhhhhhHHHHHHHHhhCCCchhhHH--------------
Confidence               000000001123579999999999863      468999999999999999999999885321              


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                         ..+..+....  +|+. +..-.+++.+++.+||.+||.+||++.|+|+||||...
T Consensus       220 ---~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        220 ---RTMSSLRHRV--LPPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             ---HHHHHHHHhh--cChh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence               1122222111  1211 11225667899999999999999999999999999753

>KOG0607|consensus

Probab=99.92  E-value=2.3e-25  Score=213.49  Aligned_cols=131  Identities=68%  Similarity=1.298  Sum_probs=118.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|.||||||||||...++....+|||||++++++..+..-. +..+|++.+++|+.+|||||++..|.+ ++..|
T Consensus       191 FlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s-pastP~L~tPvGSAEfMAPEVVd~fv~-qA~~Y  268 (463)
T KOG0607|consen  191 FLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS-PASTPELLTPVGSAEFMAPEVVDVFVD-QATFY  268 (463)
T ss_pred             HHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC-CCCCccccCcccchhhcchhHHhhhcc-ccccc
Confidence            4577799999999999999999999999999999999987766544 888999999999999999999877654 57889


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG  253 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g  253 (539)
                      +.+||.||+|||+|+||+|.+||.|.|++||+|.|.+-|..|...+.|..+.|
T Consensus       269 DKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG  321 (463)
T KOG0607|consen  269 DKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG  321 (463)
T ss_pred             cccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999998888866655

>KOG0199|consensus

Probab=99.90  E-value=2.4e-24  Score=224.30  Aligned_cols=247  Identities=21%  Similarity=0.390  Sum_probs=169.8

Q ss_pred             CceeceeCceEEEEEEEccC-C--cEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILT-E--LEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t-~--~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .|+||+|.||+|++|..... |  ..||||++...... ...+|++|+.+|.+++ |||+|+||++.-+.          
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~-H~hliRLyGvVl~q----------  183 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ-HPHLIRLYGVVLDQ----------  183 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc-CcceeEEeeeeccc----------
Confidence            46899999999999976543 3  36999999643322 5678999999999975 99999999765431          


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                           |- .++        ..|+..                         |+.       +..+..       .+-+++-
T Consensus       184 -----p~-mMV--------~ELapl-------------------------GSL-------ldrLrk-------a~~~~ll  210 (1039)
T KOG0199|consen  184 -----PA-MMV--------FELAPL-------------------------GSL-------LDRLRK-------AKKAILL  210 (1039)
T ss_pred             -----hh-hHH--------hhhccc-------------------------chH-------HHHHhh-------cccccee
Confidence                 11 011        011111                         110       000000       0111222


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      ++.+                  |.|..|   ++.+..|+-  +++.|||||-..|||+...   ..||||||||.+.+..
T Consensus       211 v~~L------------------cdya~Q---iA~aM~YLe--skrlvHRDLAARNlllasp---rtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  211 VSRL------------------CDYAMQ---IAKAMQYLE--SKRLVHRDLAARNLLLASP---RTVKICDFGLMRALGE  264 (1039)
T ss_pred             HHHH------------------HHHHHH---HHHHHHHHh--hhhhhhhhhhhhhheeccc---ceeeeecccceeccCC
Confidence            2222                  224556   788888988  9999999999999999753   4599999999998776


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      +...+...  +..   ---..|.|||-|+.      ..++.++|+|++||+++||++ |.-||.|...            
T Consensus       265 ned~Yvm~--p~r---kvPfAWCaPEsLrh------~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g------------  321 (1039)
T KOG0199|consen  265 NEDMYVMA--PQR---KVPFAWCAPESLRH------RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG------------  321 (1039)
T ss_pred             CCcceEec--CCC---cCcccccCHhHhcc------ccccccchhhhhhhhHHhhhccCCCCCCCCCH------------
Confidence            65433210  000   11236999999973      468899999999999999987 7899998653            


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                         ..++++|..++ .+|..  +..+++.-+++.+|...+|..|||...+.
T Consensus       322 ---~qIL~~iD~~e-rLpRP--k~csedIY~imk~cWah~paDRptFsair  366 (1039)
T KOG0199|consen  322 ---IQILKNIDAGE-RLPRP--KYCSEDIYQIMKNCWAHNPADRPTFSAIR  366 (1039)
T ss_pred             ---HHHHHhccccc-cCCCC--CCChHHHHHHHHHhccCCccccccHHHHH
Confidence               34777777543 34433  35788999999999999999999977664

>KOG4257|consensus

Probab=99.90  E-value=1.6e-24  Score=222.92  Aligned_cols=240  Identities=22%  Similarity=0.377  Sum_probs=166.2

Q ss_pred             CceeceeCceEEEEEEEcc--CC--cEEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNIL--TE--LEYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~--t~--~~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      +++||+|-||.||+|+...  .|  ..||||..++. ....++.++.|.-+|+.+ +|||||+|++++.+..-+.    |
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e~P~Wi----v  468 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVEQPMWI----V  468 (974)
T ss_pred             HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-CCcchhheeeeeeccceeE----E
Confidence            4689999999999997543  22  35899988652 234477899999999997 6999999999887653221    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            +|              |+.+|                  ++..      |     +.           ...|.-
T Consensus       469 ------mE--------------L~~~G------------------ELr~------y-----Lq-----------~nk~sL  488 (974)
T KOG4257|consen  469 ------ME--------------LAPLG------------------ELRE------Y-----LQ-----------QNKDSL  488 (974)
T ss_pred             ------Ee--------------cccch------------------hHHH------H-----HH-----------hccccc
Confidence                  11              11111                  0000      0     10           011222


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      .++.++...                  .|   +..+++|+|  +++.|||||-..|||+.+++   .|||+|||+++.+.
T Consensus       489 ~l~tL~ly~------------------~Q---i~talaYLe--SkrfVHRDIAaRNiLVsSp~---CVKLaDFGLSR~~e  542 (974)
T KOG4257|consen  489 PLRTLTLYC------------------YQ---ICTALAYLE--SKRFVHRDIAARNILVSSPQ---CVKLADFGLSRYLE  542 (974)
T ss_pred             hHHHHHHHH------------------HH---HHHHHHHHH--hhchhhhhhhhhheeecCcc---eeeecccchhhhcc
Confidence            233322211                  12   677899999  99999999999999997654   48999999999876


Q ss_pred             cCCCCCCCCCCCCcccccc--CcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        288 FNTSVHSPLATPLLLTPVG--SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~G--T~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      ...-++.        + .|  -.-|||||-++      ...++.++|+|-+||.++|.|+ |.-||.|-...|       
T Consensus       543 d~~yYka--------S-~~kLPIKWmaPESIN------fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-------  600 (974)
T KOG4257|consen  543 DDAYYKA--------S-RGKLPIKWMAPESIN------FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-------  600 (974)
T ss_pred             ccchhhc--------c-ccccceeecCccccc------hhcccchhhHHHHHHHHHHHHHhcCCccccccccc-------
Confidence            5543221        1 22  23699999986      2468899999999999999876 999999865444       


Q ss_pred             cchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHH
Q psy16343        365 TCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV  417 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~  417 (539)
                              ..-.|.+|. +..|    ++.++.+-.|.++|..+||.+||+..|+
T Consensus       601 --------VI~~iEnGeRlP~P----~nCPp~LYslmskcWayeP~kRPrftei  642 (974)
T KOG4257|consen  601 --------VIGHIENGERLPCP----PNCPPALYSLMSKCWAYEPSKRPRFTEI  642 (974)
T ss_pred             --------eEEEecCCCCCCCC----CCCChHHHHHHHHHhccCcccCCcHHHH
Confidence                    223445553 3444    3678889999999999999999986543

>KOG0603|consensus

Probab=99.90  E-value=1.8e-24  Score=225.24  Aligned_cols=161  Identities=34%  Similarity=0.561  Sum_probs=134.2

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc-
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN-  120 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~-  120 (539)
                      +..|.+.|++..+ +|.|+|++|..|.+..+++.+|||+|.+..    .+..+|+.++....+||||++++++|.++.+ 
T Consensus       317 ~~~~~~~y~~~~~-~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~  391 (612)
T KOG0603|consen  317 TAPFTESYEFREE-LGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEI  391 (612)
T ss_pred             cCCcchhhccccc-cCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCcee
Confidence            4468889998655 999999999999999999999999998752    2345688888888899999999999887642 


Q ss_pred             --------------------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCC
Q psy16343        121 --------------------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  162 (539)
Q Consensus       121 --------------------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~  162 (539)
                                                            +.|.++||||||||+|||+.  ++.++++|+|||+++.... 
T Consensus       392 ~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~-  468 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELER-  468 (612)
T ss_pred             eeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCch-
Confidence                                                  34678999999999999996  4567799999999865432 


Q ss_pred             CCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        163 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       163 ~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                                .+.+.+-|..|.|||+..      ...|+++|||||+|++||+||+|+.||...
T Consensus       469 ----------~~~tp~~t~~y~APEvl~------~~~yt~acD~WSLGvlLy~ML~G~tp~~~~  516 (612)
T KOG0603|consen  469 ----------SCDTPALTLQYVAPEVLA------IQEYTEACDWWSLGVLLYEMLTGRTLFAAH  516 (612)
T ss_pred             ----------hhcccchhhcccChhhhc------cCCCCcchhhHHHHHHHHHHHhCCCccccC
Confidence                      233556788999999985      478999999999999999999999999764

>KOG1094|consensus

Probab=99.89  E-value=3.7e-23  Score=211.85  Aligned_cols=246  Identities=22%  Similarity=0.308  Sum_probs=162.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee-e
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH-R  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH-r  130 (539)
                      .+.||+|-||.|.+|.- ..+..||||+++.. ..+.+..+.+||++|.+| +|||||.|+.+|..++-.......+| +
T Consensus       543 ~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EYmEnG  620 (807)
T KOG1094|consen  543 KEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEYMENG  620 (807)
T ss_pred             hhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHHHhcC
Confidence            57899999999999974 44689999999642 345578899999999998 69999999999866553321111100 1


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                      ||+  +.+                                             ++-         ++..   ..+..+++
T Consensus       621 DLn--qFl---------------------------------------------~ah---------eapt---~~t~~~vs  641 (807)
T KOG1094|consen  621 DLN--QFL---------------------------------------------SAH---------ELPT---AETAPGVS  641 (807)
T ss_pred             cHH--HHH---------------------------------------------Hhc---------cCcc---cccchhHH
Confidence            110  000                                             000         0000   00001111


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                            +..|   ++++.+|+-  +.++|||||-+.|+|+   +...++||||||+++.+-...
T Consensus       642 ----------------------i~tq---iasgmaYLe--s~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg~  691 (807)
T KOG1094|consen  642 ----------------------ICTQ---IASGMAYLE--SLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSGD  691 (807)
T ss_pred             ----------------------HHHH---HHHHHHHHH--hhchhhccccccceee---cCcccEEecCcccccccccCC
Confidence                                  3334   778889998  9999999999999999   667789999999998542222


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHH--HhCCCCCCCCCCCCCCcccCccchh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL--LCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~l--l~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ..+..      -..+-..-|||+|-+..      ..++.++|+|++||++||+  +|..-||..-+.++           
T Consensus       692 yy~vq------gr~vlpiRwmawEsill------gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~-----------  748 (807)
T KOG1094|consen  692 YYRVQ------GRAVLPIRWMAWESILL------GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ-----------  748 (807)
T ss_pred             ceeee------cceeeeeeehhHHHHHh------ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH-----------
Confidence            11100      01233457999997752      3688999999999999997  45778986543221           


Q ss_pred             hHHHHHHH---HhcCC-----CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        369 CQEILFHS---IQQGH-----YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       369 ~~~~~~~~---i~~~~-----~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          ..+.   ...+.     +..|    .-.+..+-.|+.+|..+|-.+||+.+++-.|
T Consensus       749 ----vven~~~~~~~~~~~~~l~~P----~~cp~~lyelml~Cw~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  749 ----VVENAGEFFRDQGRQVVLSRP----PACPQGLYELMLRCWRRESEQRPSFEQLHLF  800 (807)
T ss_pred             ----HHHhhhhhcCCCCcceeccCC----CcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence                1111   11110     1112    3467788899999999999999999998544

>KOG3653|consensus

Probab=99.89  E-value=2.7e-23  Score=208.92  Aligned_cols=267  Identities=21%  Similarity=0.257  Sum_probs=155.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhh-cCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHC-QGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~-~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .++||+|.||.||||..  +++.||||++...   ....+..|-.|+... ..|+||++++.+=+.+...          
T Consensus       215 ~eli~~Grfg~V~KaqL--~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~----------  279 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD----------  279 (534)
T ss_pred             HHHhhcCccceeehhhc--cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc----------
Confidence            36899999999999974  5689999998532   345667777766532 2599999998655443321          


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                       ++|.-|+.           .|                      ..-|+.    -+++...           +=-|.=-|
T Consensus       280 -~~eywLVt-----------~f----------------------h~kGsL----~dyL~~n-----------tisw~~~c  310 (534)
T KOG3653|consen  280 -RMEYWLVT-----------EF----------------------HPKGSL----CDYLKAN-----------TISWNSLC  310 (534)
T ss_pred             -ccceeEEe-----------ee----------------------ccCCcH----HHHHHhc-----------cccHHHHH
Confidence             24544431           11                      001110    0001000           00111111


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhh-------hhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHS-------IQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~-------h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      =+.+-                       +..+++|+|.       |+..|+|||||..|||+.   .+.+.-|+|||||.
T Consensus       311 ria~S-----------------------marGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK---~DlTccIaDFGLAl  364 (534)
T KOG3653|consen  311 RIAES-----------------------MARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK---NDLTCCIADFGLAL  364 (534)
T ss_pred             HHHHH-----------------------HHHHHHHhcccCCcCCCCCCccccccccccceEEc---cCCcEEeeccceeE
Confidence            11111                       3344555552       356799999999999994   44568999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+.....      ...+..-+||.-|||||||.+...-....-=.+.||||+|.+|+||++...-++.....+......+
T Consensus       365 ~~~p~~~------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~  438 (534)
T KOG3653|consen  365 RLEPGKP------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA  438 (534)
T ss_pred             EecCCCC------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence            7654322      1223457999999999999753211100001479999999999999997655431111111111000


Q ss_pred             c--chhhHHHHHHHHh--cCCCCCCCCCCCCC--CHHHHHHHHHhccccccCCCCHHH
Q psy16343        365 T--CHACQEILFHSIQ--QGHYDFPEGEWSTI--SDEAKDLIRRLLVKDARKRLSAAS  416 (539)
Q Consensus       365 ~--~~~~~~~~~~~i~--~~~~~~p~~~~~~~--s~~~~dli~~lL~~dP~~R~ta~e  416 (539)
                      .  ..-..+.+...+.  ...+.+|.. |..-  -.-+++.|..|...||+.|+||.=
T Consensus       439 evG~hPt~e~mq~~VV~kK~RP~~p~~-W~~h~~~~~l~et~EeCWDhDaeARLTA~C  495 (534)
T KOG3653|consen  439 EVGNHPTLEEMQELVVRKKQRPKIPDA-WRKHAGMAVLCETIEECWDHDAEARLTAGC  495 (534)
T ss_pred             HhcCCCCHHHHHHHHHhhccCCCChhh-hhcCccHHHHHHHHHHHcCCchhhhhhhHH
Confidence            0  0111222322222  345566653 4332  246789999999999999999753

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=1.7e-23  Score=194.21  Aligned_cols=143  Identities=21%  Similarity=0.206  Sum_probs=103.0

Q ss_pred             ccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCccccc
Q psy16343        233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA  312 (539)
Q Consensus       233 ~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~A  312 (539)
                      |..|   ++.++.|+|  ++|      ||+|||+.   ..+.+|+  ||+++.....             ..+||+.|||
T Consensus        22 i~~q---i~~~L~~lH--~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~-------------~~~g~~~y~a   72 (176)
T smart00750       22 VCLQ---CLRALRELH--RQA------KSGNILLT---WDGLLKL--DGSVAFKTPE-------------QSRVDPYFMA   72 (176)
T ss_pred             HHHH---HHHHHHHHH--hcC------CcccEeEc---Cccceee--ccceEeeccc-------------cCCCcccccC
Confidence            4455   778888888  666      99999994   3455788  9988643221             2368999999


Q ss_pred             chhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCC-CC--CCC
Q psy16343        313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDF-PE--GEW  389 (539)
Q Consensus       313 PEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-p~--~~~  389 (539)
                      ||++.+      ..|+.++||||+||++|+|++|.+||.......              .....+..+.... +.  ...
T Consensus        73 PE~~~~------~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~  132 (176)
T smart00750       73 PEVIQG------QSYTEKADIYSLGITLYEALDYELPYNEERELS--------------AILEILLNGMPADDPRDRSNL  132 (176)
T ss_pred             hHHhcC------CCCcchhhHHHHHHHHHHHHhCCCCccccchhc--------------HHHHHHHHHhccCCccccccH
Confidence            999963      468999999999999999999999997543211              1222222221111 11  111


Q ss_pred             CCCCH--HHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        390 STISD--EAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       390 ~~~s~--~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      ..++.  ++++||.+||..||.+||++.|+++|+|+.
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            23444  699999999999999999999999999975

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4278|consensus

Probab=99.88  E-value=1.1e-22  Score=209.09  Aligned_cols=245  Identities=22%  Similarity=0.312  Sum_probs=172.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      ...||-|.||.||.++.+.-...||||.++.. ......|++|..+|+.+ +|||+|+|+.+|..+.-+|   .|     
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFY---Ii-----  341 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFY---II-----  341 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeE---EE-----
Confidence            35699999999999999998999999999643 34567899999999987 5999999999998776555   12     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       .|.+-              +  +.                ++.      |     ++   +...+      .|  -.||
T Consensus       342 -TEfM~--------------y--GN----------------LLd------Y-----LR---ecnr~------ev--~avv  366 (1157)
T KOG4278|consen  342 -TEFMC--------------Y--GN----------------LLD------Y-----LR---ECNRS------EV--PAVV  366 (1157)
T ss_pred             -Eeccc--------------C--cc----------------HHH------H-----HH---Hhchh------hc--chhH
Confidence             12111              0  10                000      0     00   00000      01  1256


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                      |.+|.+.                    +.++..|+.  .++.|||||-..|.|+   +.+.-||++||||++.+.-.+-.
T Consensus       367 LlyMAtQ--------------------IsSaMeYLE--kknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtgDTYT  421 (1157)
T KOG4278|consen  367 LLYMATQ--------------------ISSAMEYLE--KKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTGDTYT  421 (1157)
T ss_pred             HHHHHHH--------------------HHHHHHHHH--Hhhhhhhhhhhhhccc---cccceEEeeccchhhhhcCCcee
Confidence            6666543                    778888988  9999999999999999   44556899999999865433210


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                      .       ....-.-.-|.|||-|.      ...++-++|+|++||+|+++.+ |-.||.|-+.               .
T Consensus       422 A-------HAGAKFPIKWTAPEsLA------yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---------------S  473 (1157)
T KOG4278|consen  422 A-------HAGAKFPIKWTAPESLA------YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------------S  473 (1157)
T ss_pred             c-------ccCccCcccccCccccc------ccccccchhhHHHHHHHHHHHhcCCCCCCCccH---------------H
Confidence            0       00111234699999874      3457789999999999999976 8899988531               1


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       372 ~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                      .++. +....|++..+  ....+.+-.|++.|.+++|..||+..|+-
T Consensus       474 qVY~-LLEkgyRM~~P--eGCPpkVYeLMraCW~WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  474 QVYG-LLEKGYRMDGP--EGCPPKVYELMRACWNWSPSDRPSFAEIH  517 (1157)
T ss_pred             HHHH-HHhccccccCC--CCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence            2333 33345665543  36789999999999999999999987653

>KOG2052|consensus

Probab=99.87  E-value=2.1e-22  Score=201.09  Aligned_cols=259  Identities=24%  Similarity=0.354  Sum_probs=155.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHh-hcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH-CQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~-~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|.||.|++|.  ..|+.||||++...   ....+++|-++.+. +++|+||+.+++.-..+....         
T Consensus       216 ~e~IGkGRyGEVwrG~--wrGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~---------  281 (513)
T KOG2052|consen  216 QEIIGKGRFGEVWRGR--WRGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW---------  281 (513)
T ss_pred             EEEecCccccceeecc--ccCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce---------
Confidence            3689999999999885  57899999999643   34578899988874 457999997765432222111         


Q ss_pred             CCCCCeeccCCCCCCCeEEEecc-ccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfg-l~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                        .+--|           |.||- .|                .++++...                 .    ..|+=  +
T Consensus       282 --TQLwL-----------vTdYHe~G----------------SL~DyL~r-----------------~----tv~~~--~  309 (513)
T KOG2052|consen  282 --TQLWL-----------VTDYHEHG----------------SLYDYLNR-----------------N----TVTTE--G  309 (513)
T ss_pred             --EEEEE-----------eeecccCC----------------cHHHHHhh-----------------c----cCCHH--H
Confidence              11111           12220 01                11111000                 0    00000  0


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh------hCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ------QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~------~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      +  +-|                    -.+.+++++++|.-=      -.|.|||||..|||+.   .++..-|+|+|||.
T Consensus       310 m--l~L--------------------alS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK---kn~~C~IADLGLAv  364 (513)
T KOG2052|consen  310 M--LKL--------------------ALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAV  364 (513)
T ss_pred             H--HHH--------------------HHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc---cCCcEEEeeceeeE
Confidence            0  000                    012456666666431      2499999999999995   44568999999986


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC--cccchhhhhHHHHHHHhC----------CCCCCC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD--KRCDLWSLGVVVYILLCG----------YPPFYG  352 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~--~~~DiWSlGvily~ll~G----------~~PF~~  352 (539)
                      .....+..    -+-.....|||--|||||||...+..  ..++  ..+||||+|.|++|++..          ++||++
T Consensus       365 ~h~~~t~~----idi~~N~rVGTKRYMAPEvLdetin~--~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd  438 (513)
T KOG2052|consen  365 RHDSDTDT----IDIPPNPRVGTKRYMAPEVLDETINM--KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD  438 (513)
T ss_pred             EecccCCc----ccCCCCCccceeeccChHHhhhhcCh--hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence            43322111    01123567999999999999642211  1122  468999999999999763          589988


Q ss_pred             CCCCCCCcccCccchhhHHHHHHHH--hcCCCCCCCCCCCCCC--HHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        353 NCGEDCGWQRGETCHACQEILFHSI--QQGHYDFPEGEWSTIS--DEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~p~~~~~~~s--~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      --+.|..+          +++.+.+  ++-.+.+| ..|...+  .....|++.|...||.-|+||-.+.+
T Consensus       439 ~Vp~DPs~----------eeMrkVVCv~~~RP~ip-nrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  439 VVPSDPSF----------EEMRKVVCVQKLRPNIP-NRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             CCCCCCCH----------HHHhcceeecccCCCCC-cccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence            66665433          3333332  22233333 3465432  23456788999999999999866653

>KOG0196|consensus

Probab=99.87  E-value=8.8e-23  Score=215.29  Aligned_cols=244  Identities=22%  Similarity=0.320  Sum_probs=169.6

Q ss_pred             CceeceeCceEEEEEEEccCCc---EEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTEL---EYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .++||.|-||.|++|+.+..|+   .||||.++.- .+..+.+|+.|..||.++ +|||||+|-.+.....-......+ 
T Consensus       634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMIiTEy-  711 (996)
T KOG0196|consen  634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMIITEY-  711 (996)
T ss_pred             EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEEEhhh-
Confidence            5799999999999999887664   6999999643 234567899999999997 599999998766443221100000 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc-CCCCCCCCcccchh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM-GPEASGYDKRCDLW  207 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~-~~~~~~~~~~~Dvw  207 (539)
                           +||=-|                                                  ..|. ..+++         
T Consensus       712 -----MENGsL--------------------------------------------------DsFLR~~DGq---------  727 (996)
T KOG0196|consen  712 -----MENGSL--------------------------------------------------DSFLRQNDGQ---------  727 (996)
T ss_pred             -----hhCCcH--------------------------------------------------HHHHhhcCCc---------
Confidence                 111111                                                  0000 00000         


Q ss_pred             hhhH-HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        208 SLGV-VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       208 s~Gv-il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       |-+ -|..||.|                    ++.+..|+-  ..|.|||||-..|||++   .+-..|++||||++.+
T Consensus       728 -ftviQLVgMLrG--------------------IAsGMkYLs--dm~YVHRDLAARNILVN---snLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  728 -FTVIQLVGMLRG--------------------IASGMKYLS--DMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVL  781 (996)
T ss_pred             -eEeehHHHHHHH--------------------HHHHhHHHh--hcCchhhhhhhhheeec---cceEEEeccccceeec
Confidence             011 13456655                    778888988  89999999999999994   3445799999999866


Q ss_pred             ccCCCCCCCCCCCCccccccC--cccccchhhcccCCCCCCCCCcccchhhhhHHHHHHH-hCCCCCCCCCCCCCCcccC
Q psy16343        287 KFNTSVHSPLATPLLLTPVGS--AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT--~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll-~G~~PF~~~~~~~~~~~~~  363 (539)
                      ..+..       ....|.-|-  .-|.|||.|.      ...++.++|+||+||+++|.+ .|.-|+...+         
T Consensus       782 edd~~-------~~ytt~GGKIPiRWTAPEAIa------~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS---------  839 (996)
T KOG0196|consen  782 EDDPE-------AAYTTLGGKIPIRWTAPEAIA------YRKFTSASDVWSYGIVMWEVMSYGERPYWDMS---------  839 (996)
T ss_pred             ccCCC-------ccccccCCccceeecChhHhh------hcccCchhhccccceEEEEecccCCCcccccc---------
Confidence            43321       011122222  3699999985      357889999999999999965 5999987643         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            ....+..|.. .|.+|++.  ..+..+-.|+..|.++|-.+||+.+|+..
T Consensus       840 ------NQdVIkaIe~-gyRLPpPm--DCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  840 ------NQDVIKAIEQ-GYRLPPPM--DCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             ------hHHHHHHHHh-ccCCCCCC--CCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence                  2235566665 47777753  57888999999999999999999988765

>KOG0200|consensus

Probab=99.86  E-value=3.4e-21  Score=211.97  Aligned_cols=262  Identities=23%  Similarity=0.348  Sum_probs=169.0

Q ss_pred             CceeceeCceEEEEEEEc---c----CCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         53 GEILGKGAYASVQTCVNI---L----TELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~---~----t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ++.||+|+||.|++|.-.   .    ....||||.++... ......+..|+++|+.+..|||||.|+.++......+  
T Consensus       301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~--  378 (609)
T KOG0200|consen  301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY--  378 (609)
T ss_pred             cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE--
Confidence            458999999999998643   1    14579999986432 2345678899999999999999999999887633222  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +|.-..+--|++             +|  .+...   ..       .....-|    ..+.        +. ..-...
T Consensus       379 --~v~Ey~~~G~L~-------------~~--Lr~~r---~~-------~~~~~~~----~~~~--------~~-~~L~~~  418 (609)
T KOG0200|consen  379 --VIVEYAEHGDLL-------------EF--LRKKR---VT-------ESIDGSG----VFPN--------ER-DALTTK  418 (609)
T ss_pred             --EEEEeccCCcHH-------------HH--HHhcc---cc-------ccccccC----CCcc--------cc-CCcCHH
Confidence              111100000000             00  00000   00       0000000    0000        00 012235


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      |+++++                        .|   ++.+..|+.  ++++|||||=..|||+..   ...+||+|||||+
T Consensus       419 dLlsfa------------------------~Q---Ia~GMe~L~--~~~~vHRDLAaRNVLi~~---~~~~kIaDFGlar  466 (609)
T KOG0200|consen  419 DLLSFA------------------------YQ---IANGMEYLA--SVPCVHRDLAARNVLITK---NKVIKIADFGLAR  466 (609)
T ss_pred             HHHHHH------------------------HH---HHHHHHHHh--hCCccchhhhhhhEEecC---CCEEEEcccccee
Confidence            666654                        22   666777888  999999999999999954   3568999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcc--cccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAE--FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~--Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      .........       .....||+.  |||||.+..      ..|+.++|+||+||+|||+.+ |.+|+.+-.       
T Consensus       467 ~~~~~~~y~-------~~~~~~~LP~kWmApEsl~~------~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-------  526 (609)
T KOG0200|consen  467 DHYNKDYYR-------TKSSAGTLPVKWMAPESLFD------RVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-------  526 (609)
T ss_pred             ccCCCCceE-------ecCCCCccceeecCHHHhcc------CcccccchhhHHHHHHHHHhhCCCCCCCCCC-------
Confidence            543222110       011223333  999999862      569999999999999999987 889997621       


Q ss_pred             cCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ....+++.+..|.- ..|    ...+++.-++++.|...+|++||+..++..
T Consensus       527 -------~~~~l~~~l~~G~r~~~P----~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  527 -------PTEELLEFLKEGNRMEQP----EHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             -------cHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                   12345667777643 334    356999999999999999999999887663

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=4.6e-21  Score=180.55  Aligned_cols=213  Identities=35%  Similarity=0.531  Sum_probs=146.9

Q ss_pred             eceeCceEEEEEEEccCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCCC
Q psy16343         56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKP  134 (539)
Q Consensus        56 LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~  134 (539)
                      ||+|++|.||+|....+++.+++|++...... ....+.+|++.++.+. |++|+++++++......+    ++      
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~----~~------   69 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-HPNIVKLYGVFEDENHLY----LV------   69 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEE----EE------
Confidence            68999999999999888999999998653221 2467889999999874 899999999887642211    10      


Q ss_pred             CCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcccchhhhhHHH
Q psy16343        135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       135 enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil  213 (539)
                                      .++  ..+.             .+...+... .-..++                 ++|.     
T Consensus        70 ----------------~e~--~~~~-------------~l~~~~~~~~~~~~~~-----------------~~~~-----   96 (215)
T cd00180          70 ----------------MEY--CEGG-------------SLKDLLKENEGKLSED-----------------EILR-----   96 (215)
T ss_pred             ----------------Eec--CCCC-------------cHHHHHHhccCCCCHH-----------------HHHH-----
Confidence                            111  0000             000000000 000000                 0010     


Q ss_pred             HHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC
Q psy16343        214 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH  293 (539)
Q Consensus       214 ~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~  293 (539)
                                         +..+   ++.++.++|  ++|++|+||+|.||++...  .+.++|+|||.+........  
T Consensus        97 -------------------~~~~---l~~~l~~lh--~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~~~~~~--  148 (215)
T cd00180          97 -------------------ILLQ---ILEGLEYLH--SNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLLTSDKS--  148 (215)
T ss_pred             -------------------HHHH---HHHHHHHHH--hCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEccCCcc--
Confidence                               2233   566677777  8899999999999999541  35699999999875432210  


Q ss_pred             CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHH
Q psy16343        294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL  373 (539)
Q Consensus       294 ~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~  373 (539)
                            ......++..|++||++..     ...++.+.|+|++|+++|+|                              
T Consensus       149 ------~~~~~~~~~~~~~pe~~~~-----~~~~~~~~D~~~lg~~~~~l------------------------------  187 (215)
T cd00180         149 ------LLKTIVGTPAYMAPEVLLG-----KGYYSEKSDIWSLGVILYEL------------------------------  187 (215)
T ss_pred             ------hhhcccCCCCccChhHhcc-----cCCCCchhhhHHHHHHHHHH------------------------------
Confidence                  1123568889999999863     12577889999999999998                              


Q ss_pred             HHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCC
Q psy16343        374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP  421 (539)
Q Consensus       374 ~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hp  421 (539)
                                          ....++|.+||..||++||+++++++|+
T Consensus       188 --------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 --------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             --------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                2467899999999999999999999985

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1025|consensus

Probab=99.85  E-value=9.8e-22  Score=208.12  Aligned_cols=244  Identities=23%  Similarity=0.365  Sum_probs=164.7

Q ss_pred             cCceeceeCceEEEEEEEccCCc----EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         52 KGEILGKGAYASVQTCVNILTEL----EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~----~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.++||+|+||+||+|.....|+    +||||++..... .....++.|.-+|.++ +|||+++|++++......    .
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~~q----l  774 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-DHPNLLRLLGVCMLSTLQ----L  774 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-CCchHHHHhhhcccchHH----H
Confidence            35789999999999999876664    689999865433 3346788999999986 699999999988654311    0


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      .+.+-              +  |                .+.+.           ++..    ...++.+   
T Consensus       775 v------tq~mP--------------~--G----------------~LlDy-----------vr~h----r~~igsq---  798 (1177)
T KOG1025|consen  775 V------TQLMP--------------L--G----------------CLLDY-----------VREH----RDNIGSQ---  798 (1177)
T ss_pred             H------HHhcc--------------c--c----------------hHHHH-----------HHHh----hccccHH---
Confidence            1      00000              0  0                00000           0000    0000000   


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                                            ....|-.|   ++.+..|+|  .+++|||||-..|+|+...+   .+||.|||+|+.+
T Consensus       799 ----------------------~lLnw~~Q---IAkgM~YLe--~qrlVHrdLaaRNVLVksP~---hvkitdfgla~ll  848 (1177)
T KOG1025|consen  799 ----------------------DLLNWCYQ---IAKGMKYLE--EQRLVHRDLAARNVLVKSPN---HVKITDFGLAKLL  848 (1177)
T ss_pred             ----------------------HHHHHHHH---HHHHHHHHH--hcchhhhhhhhhheeecCCC---eEEEEecchhhcc
Confidence                                  00115555   788888999  99999999999999997654   4899999999876


Q ss_pred             ccCCCCCCCCCCCCcccccc--CcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        287 KFNTSVHSPLATPLLLTPVG--SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~G--T~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      ........        +.-|  -+-|||=|.+.      ...|+..+|+||+||..+|++| |.-|+.+...        
T Consensus       849 ~~d~~ey~--------~~~gK~pikwmale~i~------~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--------  906 (1177)
T KOG1025|consen  849 APDEKEYS--------APGGKVPIKWMALESIR------IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--------  906 (1177)
T ss_pred             Cccccccc--------ccccccCcHHHHHHHhh------ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--------
Confidence            54432211        1122  34578888775      3579999999999999999987 8899987642        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                             +++-..+..|. +++.+  +..+-++--++.+|+..|+..||+++++-
T Consensus       907 -------~eI~dlle~ge-RLsqP--piCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  907 -------EEIPDLLEKGE-RLSQP--PICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             -------HHhhHHHhccc-cCCCC--CCccHHHHHHHHHHhccCcccCccHHHHH
Confidence                   33444444443 23322  35678899999999999999999988764

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.84  E-value=1.2e-20  Score=180.86  Aligned_cols=216  Identities=31%  Similarity=0.441  Sum_probs=143.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .+.||+|+||.||++.+..++..+|+|.+...... ....+.+|++.+.++ +|+||+++++++......+   .+    
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~---~v----   75 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLY---LV----   75 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceE---EE----
Confidence            46799999999999999988999999999754433 456788899999987 6999999998876543221   01    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                         .++  ..+.             .+...           +..    .... ....++|.   
T Consensus        76 -------------------~e~--~~~~-------------~L~~~-----------~~~----~~~~-~~~~~~~~---  102 (225)
T smart00221       76 -------------------MEY--CEGG-------------DLFDY-----------LRK----KGGK-LSEEEARF---  102 (225)
T ss_pred             -------------------Eec--cCCC-------------CHHHH-----------HHh----cccC-CCHHHHHH---
Confidence                               000  0000             00000           000    0000 00011111   


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                                           +..+   ++.++.++|  ++|++|+||+|.||++..   .+.++|+|||++........
T Consensus       103 ---------------------~~~~---l~~~l~~lh--~~~i~h~di~~~ni~v~~---~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221      103 ---------------------YLRQ---ILEALEYLH--SLGIVHRDLKPENILLGM---DGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             ---------------------HHHH---HHHHHHHHH--hCCeecCCCCHHHEEEcC---CCCEEEeeCceeeEecCccc
Confidence                                 1122   556667777  889999999999999954   36699999999875433210


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE  371 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~  371 (539)
                             ......+++..|++||++..     ...++.++|+|+||+++|+|++|++||.+..             ....
T Consensus       154 -------~~~~~~~~~~~~~~pe~~~~-----~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~-------------~~~~  208 (225)
T smart00221      154 -------ALLKTVKGTPFYLAPEVLLG-----GKGYGEAVDIWSLGVILYELLWGPEPFSGEG-------------EFTS  208 (225)
T ss_pred             -------ccccceeccCCcCCHhHhcC-----CCCCCchhhHHHHHHHHHHHHHCCCCccccc-------------hhHH
Confidence                   01235678899999999831     2467779999999999999999999997611             1234


Q ss_pred             HHHHHHhcCCCC
Q psy16343        372 ILFHSIQQGHYD  383 (539)
Q Consensus       372 ~~~~~i~~~~~~  383 (539)
                      .+.+.|..+.+.
T Consensus       209 ~~~~~~~~~~~~  220 (225)
T smart00221      209 LLSDVWSFGVPL  220 (225)
T ss_pred             HHHHHHhcCCcc
Confidence            567777777643

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0598|consensus

Probab=99.83  E-value=2.8e-21  Score=189.99  Aligned_cols=161  Identities=30%  Similarity=0.527  Sum_probs=110.1

Q ss_pred             ccccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHH------HHHhhcCCCCee
Q psy16343         39 SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVE------TFHHCQGHPNII  109 (539)
Q Consensus        39 ~~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~------~l~~~~~HpnIv  109 (539)
                      .+..+.|..+|.+..+     .-|.+|.-+-. .+.    |++++..   ......++.+++      .....++...+.
T Consensus        32 viGkG~fGkV~~Vrk~-----dt~kiYAmKvl-~K~----~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   32 VIGKGSFGKVFQVRKK-----DTGKIYAMKVL-KKK----KIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             eeeccCCceEEEEEEc-----ccCceeehhhh-hhh----HhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            3457778888886533     44555532211 111    1222211   112233444432      222356677888


Q ss_pred             eeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCC
Q psy16343        110 QLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  162 (539)
Q Consensus       110 ~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~  162 (539)
                      -+++|...++.                           +.|.++||||||||||||+   +..++++|+|||+++.....
T Consensus       102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKD  178 (357)
T ss_pred             EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccC
Confidence            88888776653                           3477899999999999999   77788999999998642222


Q ss_pred             CCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        163 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       163 ~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ..        ...+.|||++|||||++.      ..+|+..+|+||+|+++|+||+|.+||++.
T Consensus       179 ~~--------~t~tfcGT~eYmAPEil~------~~gy~~~vDWWsLGillYeML~G~pPF~~~  228 (357)
T KOG0598|consen  179 GD--------ATRTFCGTPEYMAPEILL------GKGYDKAVDWWSLGILLYEMLTGKPPFYAE  228 (357)
T ss_pred             CC--------ccccccCCccccChHHHh------cCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence            11        123679999999999985      368999999999999999999999999875

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=3.6e-20  Score=189.76  Aligned_cols=188  Identities=18%  Similarity=0.176  Sum_probs=115.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEcc-CCcEEEEEEeccCC-----CCCHHHHHHHHHHHHhhcCCCCeee-eeeeec
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNIL-TELEYAVKIIDKLP-----GHSRSRVFKEVETFHHCQGHPNIIQ-LLEYYE  116 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~-t~~~vAvK~i~k~~-----~~~~~~~~~Ei~~l~~~~~HpnIv~-l~~~~~  116 (539)
                      .+.+.|.+ ++.||+|+||+||+|++.. +++.||||++....     ......+.+|+++|.++ +|+|||. ++++  
T Consensus        15 ~~~~~Y~~-~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~--   90 (365)
T PRK09188         15 ALSARFVE-TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT--   90 (365)
T ss_pred             cccCCceE-ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc--
Confidence            46677876 6789999999999999876 67788999875321     11245688999999997 4999984 4432  


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                       + ..+   .|      +|.+.                 + +              .+.       .     ..      
T Consensus        91 -~-~~~---LV------mE~~~-----------------G-~--------------~L~-------~-----~~------  109 (365)
T PRK09188         91 -G-KDG---LV------RGWTE-----------------G-V--------------PLH-------L-----AR------  109 (365)
T ss_pred             -C-CcE---EE------EEccC-----------------C-C--------------CHH-------H-----hC------
Confidence             1 011   11      11110                 1 0              000       0     00      


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCC-CCCceeecCCCCCCCc
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDL-KPENILCVHPDQLSPV  275 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDl-KpeNiL~~~~~~~~~i  275 (539)
                      ...     +                         ..|.++   ++.++.|+|  ++||+|||| ||+|||+.   ..+.+
T Consensus       110 ~~~-----~-------------------------~~~~~~---i~~aL~~lH--~~gIiHrDL~KP~NILv~---~~~~i  151 (365)
T PRK09188        110 PHG-----D-------------------------PAWFRS---AHRALRDLH--RAGITHNDLAKPQNWLMG---PDGEA  151 (365)
T ss_pred             ccc-----h-------------------------HHHHHH---HHHHHHHHH--HCCCeeCCCCCcceEEEc---CCCCE
Confidence            000     0                         002333   567788888  999999999 99999994   33569


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchh
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  334 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiW  334 (539)
                      ||+|||+|+.+..............+.+.+||+.|+|||++...........+...|-|
T Consensus       152 kLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        152 AVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             EEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            99999999865432211111112334578899999999998632111111233446777

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.81  E-value=6.4e-19  Score=176.55  Aligned_cols=269  Identities=27%  Similarity=0.404  Sum_probs=166.1

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      .+.||.|+||.||++.+.   ..+|+|.+.+....   ....+.+|+.++..+..|++|+++.+.+......+    +  
T Consensus         5 ~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~----~--   75 (384)
T COG0515           5 LRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLY----L--   75 (384)
T ss_pred             EEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEE----E--
Confidence            457899999999999887   77999999654332   25678899999998864448999999884433211    0  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                              +            ..+.-+..               +.           +.......  ....   .+- ..
T Consensus        76 --------~------------~~~~~~~~---------------l~-----------~~~~~~~~--~~~~---~~~-~~  103 (384)
T COG0515          76 --------V------------MEYVDGGS---------------LE-----------DLLKKIGR--KGPL---SES-EA  103 (384)
T ss_pred             --------E------------EecCCCCc---------------HH-----------HHHHhccc--ccCC---CHH-HH
Confidence                    0            00000000               00           00000000  0000   000 00


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                      -.                     +..+   ++.++.++|  ++|++|||+||+|||+...+.  .++++|||+++.....
T Consensus       104 ~~---------------------~~~~---~~~~l~~~H--~~~~~hrd~kp~nil~~~~~~--~~~l~dfg~~~~~~~~  155 (384)
T COG0515         104 LF---------------------ILAQ---ILSALEYLH--SKGIIHRDIKPENILLDRDGR--VVKLIDFGLAKLLPDP  155 (384)
T ss_pred             HH---------------------HHHH---HHHHHHHHH--hCCeeccCCCHHHeeecCCCC--eEEEeccCcceecCCC
Confidence            00                     2233   445556677  999999999999999954321  5899999998744322


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ......  .....+.+||+.|+|||++....   ...+....|+||+|+++|+++.|..||......           ..
T Consensus       156 ~~~~~~--~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-----------~~  219 (384)
T COG0515         156 GSTSSI--PALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-----------SA  219 (384)
T ss_pred             Cccccc--cccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-----------cc
Confidence            210000  01235779999999999986310   035778999999999999999999998765321           00


Q ss_pred             HHHHHHHHhcCCCC-CCCCCCCCC----CHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        370 QEILFHSIQQGHYD-FPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       370 ~~~~~~~i~~~~~~-~p~~~~~~~----s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .......+...... +........    ...+.+++.+++..+|..|.+..+...++|....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         220 TSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             HHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            12233334333322 222111111    2589999999999999999999999988776543

>KOG0616|consensus

Probab=99.79  E-value=5.5e-20  Score=175.44  Aligned_cols=159  Identities=31%  Similarity=0.540  Sum_probs=114.4

Q ss_pred             ccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHH------HHHhhcCCCCeeeeeee
Q psy16343         41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVE------TFHHCQGHPNIIQLLEY  114 (539)
Q Consensus        41 ~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~------~l~~~~~HpnIv~l~~~  114 (539)
                      .++.|..+.-+     -+-.-|..|..+-...++.|-+|.++.  .+..+++++.+.      +...+.+..|+--+++|
T Consensus        53 GtGSFGrV~LV-----r~k~~g~yYAmKvL~k~~vVklKQveH--~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmey  125 (355)
T KOG0616|consen   53 GTGSFGRVHLV-----REKHSGNYYAMKVLDKQKVVKLKQVEH--THNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEY  125 (355)
T ss_pred             ccCccceEEEE-----EEccCCceeehhhcCHHHHHHHHHHHH--HhhHHHHHhhccCceeEEEEEeeccCCeEEEEEec
Confidence            35556654322     222335566544444445555555532  233456666554      11234566788888888


Q ss_pred             eccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCC
Q psy16343        115 YEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS  167 (539)
Q Consensus       115 ~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~  167 (539)
                      ...++.                           +.|+..||+|||||||||+   +..+++||.|||+++....      
T Consensus       126 v~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~------  196 (355)
T KOG0616|consen  126 VPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSG------  196 (355)
T ss_pred             cCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecC------
Confidence            877653                           3477899999999999999   7788999999999965432      


Q ss_pred             CCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       168 ~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                           ..++.||||.|+|||++.      ..+|+.++|+|||||++|||+.|.+||+..
T Consensus       197 -----rT~TlCGTPeYLAPEii~------sk~ynkavDWWalGVLIYEMlaG~pPF~~~  244 (355)
T KOG0616|consen  197 -----RTWTLCGTPEYLAPEIIQ------SKGYNKAVDWWALGVLIYEMLAGYPPFYDD  244 (355)
T ss_pred             -----cEEEecCCccccChHHhh------cCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence                 345789999999999985      478999999999999999999999999875

>KOG0595|consensus

Probab=99.79  E-value=3.1e-20  Score=184.34  Aligned_cols=109  Identities=33%  Similarity=0.595  Sum_probs=89.3

Q ss_pred             CCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCC---CCeEEEec
Q psy16343        104 GHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQL---SPVKLCDF  153 (539)
Q Consensus       104 ~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~---~~ikl~Df  153 (539)
                      .-.+|.-++|||..++.                           ..|.+.||||||||+|||+..+...   ..+||+||
T Consensus        80 ~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF  159 (429)
T KOG0595|consen   80 DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADF  159 (429)
T ss_pred             cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence            35678888999987753                           2356789999999999999876333   67999999


Q ss_pred             cccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       154 gl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      |+++.+....         ...+.||++.|||||++.      .+.|+.|+|+||+|+|+|+|++|++||.+.+
T Consensus       160 GfAR~L~~~~---------~a~tlcGSplYMAPEV~~------~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  160 GFARFLQPGS---------MAETLCGSPLYMAPEVIM------SQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             chhhhCCchh---------HHHHhhCCccccCHHHHH------hccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            9997655322         345789999999999985      3679999999999999999999999998754

>KOG0592|consensus

Probab=99.79  E-value=1.3e-19  Score=185.28  Aligned_cols=117  Identities=34%  Similarity=0.561  Sum_probs=90.9

Q ss_pred             hhcCCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEec
Q psy16343        101 HCQGHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDF  153 (539)
Q Consensus       101 ~~~~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Df  153 (539)
                      .+++-.++.-+++|...++.                           +.|.++||||||||||||+   +.+++++|+||
T Consensus       142 TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDF  218 (604)
T KOG0592|consen  142 TFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDF  218 (604)
T ss_pred             EeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeec
Confidence            45677888888988887763                           4588899999999999999   77889999999


Q ss_pred             cccccCcCCCCC----CCC-CCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        154 DLGSGIKFNTSV----HSP-LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       154 gl~~~~~~~~~~----~~~-~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |-++.+......    ..+ ..+..-.+.+||..|.+||++..      ...+..+|+|+||||+|+|+.|.+||.+.
T Consensus       219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~------~~~~~~sDiWAlGCilyQmlaG~PPFra~  290 (604)
T KOG0592|consen  219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND------SPAGPSSDLWALGCILYQMLAGQPPFRAA  290 (604)
T ss_pred             cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC------CCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence            988655432221    011 11111245799999999999863      55678999999999999999999999764

>KOG0605|consensus

Probab=99.78  E-value=1.8e-19  Score=184.27  Aligned_cols=173  Identities=26%  Similarity=0.527  Sum_probs=117.2

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHH------HHHHhhcCCCCeeeeee
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEV------ETFHHCQGHPNIIQLLE  113 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei------~~l~~~~~HpnIv~l~~  113 (539)
                      +..+.|..+|-+.     +-.-|.||.-+-......++...+..  ....+.++.|+      .++..+++-.|+.-++|
T Consensus       149 IgkGAfGeVrLar-----Kk~Tg~iyAmK~LkKS~M~~~~Qv~h--V~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiME  221 (550)
T KOG0605|consen  149 IGKGAFGEVRLAR-----KKDTGEIYAMKILKKSEMLKKNQVEH--VRAERDILAEVDSPWVVKLYYSFQDKEYLYLIME  221 (550)
T ss_pred             eccccceeEEEEE-----EccCCcEEeeecccHHHHHhhhhHHH--HHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEE
Confidence            4567788877653     23556777544333223233222221  11233455543      24445677889999999


Q ss_pred             eeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCC-
Q psy16343        114 YYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV-  165 (539)
Q Consensus       114 ~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~-  165 (539)
                      |+..++.                           ..|..++|||||||||+||   +..+++||+||||+.++...... 
T Consensus       222 ylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~~~~~~  298 (550)
T KOG0605|consen  222 YLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDKKHRIE  298 (550)
T ss_pred             ecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhhhhhhh
Confidence            9987752                           2477899999999999999   77889999999998664320000 


Q ss_pred             ------------------CCC-----CCC---------------CCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        166 ------------------HSP-----LAT---------------PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       166 ------------------~~~-----~~~---------------~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                        ..+     ..+               ...+..+|||.|||||++.      ..+|+..||+|
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll------~kgY~~~cDwW  372 (550)
T KOG0605|consen  299 SYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL------GKGYGKECDWW  372 (550)
T ss_pred             hhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh------cCCCCccccHH
Confidence                              000     000               0124578999999999985      47799999999


Q ss_pred             hhhHHHHHHHhCCCCCCCCCC
Q psy16343        208 SLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~  228 (539)
                      |+|||+||||.|.+||.++..
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp  393 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETP  393 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999998753

>KOG0694|consensus

Probab=99.77  E-value=2.4e-19  Score=188.26  Aligned_cols=113  Identities=32%  Similarity=0.515  Sum_probs=91.2

Q ss_pred             hhcCCCCeeeeeeeeccccc--------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEecc
Q psy16343        101 HCQGHPNIIQLLEYYEDDEN--------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFD  154 (539)
Q Consensus       101 ~~~~HpnIv~l~~~~~~~~~--------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfg  154 (539)
                      ..+.-.++.-+++|...++.                          +.|.++||+||||.+||||   +..+++||+|||
T Consensus       437 ~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFG  513 (694)
T KOG0694|consen  437 CFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFG  513 (694)
T ss_pred             ccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccc
Confidence            34556778888888776652                          3467799999999999999   677889999999


Q ss_pred             ccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        155 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  230 (539)
Q Consensus       155 l~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~  230 (539)
                      +++.......        ...|.||||.|||||++.      ...|+.++|+|||||++||||.|.+||.|+..++
T Consensus       514 lcKe~m~~g~--------~TsTfCGTpey~aPEil~------e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee  575 (694)
T KOG0694|consen  514 LCKEGMGQGD--------RTSTFCGTPEFLAPEVLT------EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE  575 (694)
T ss_pred             cccccCCCCC--------ccccccCChhhcChhhhc------cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            9865332211        234789999999999986      4679999999999999999999999999875443

>KOG0615|consensus

Probab=99.76  E-value=7.5e-20  Score=181.45  Aligned_cols=95  Identities=34%  Similarity=0.628  Sum_probs=77.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||||||+..+...-.+||+|||+++... ..        ..+.|.||||.|.|||++..-   ....+
T Consensus       291 YLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-~~--------sfm~TlCGTpsYvAPEVl~~k---g~~~~  358 (475)
T KOG0615|consen  291 YLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-EG--------SFMKTLCGTPSYVAPEVLASK---GVEYY  358 (475)
T ss_pred             HHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc-cc--------eehhhhcCCccccChhheecC---Ceecc
Confidence            5688999999999999999877677789999999985432 11        145688999999999998642   12345


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      ..++|+||+|||+|.+|+|.+||.+..
T Consensus       359 ~~kVDiWSlGcvLfvcLsG~pPFS~~~  385 (475)
T KOG0615|consen  359 PSKVDIWSLGCVLFVCLSGYPPFSEEY  385 (475)
T ss_pred             cchheeeeccceEEEEeccCCCccccc
Confidence            568999999999999999999998764

>KOG0593|consensus

Probab=99.76  E-value=3.4e-19  Score=170.43  Aligned_cols=94  Identities=34%  Similarity=0.540  Sum_probs=77.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.+++||||||||||++   ...+.+||||||+|+.+..+....        .+++.|.+|.|||++.+     ...|
T Consensus       116 ~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~pgd~Y--------TDYVATRWYRaPELLvG-----DtqY  179 (396)
T KOG0593|consen  116 FCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAPGDNY--------TDYVATRWYRAPELLVG-----DTQY  179 (396)
T ss_pred             hhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCCcchh--------hhhhhhhhccChhhhcc-----cCcC
Confidence            4577799999999999999   556779999999997655332221        25688999999998864     3579


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGED  230 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~  230 (539)
                      +..+||||+||++.||++|.+.|+|.+..|
T Consensus       180 G~pVDiWAiGCv~aEl~~G~pL~PG~SDiD  209 (396)
T KOG0593|consen  180 GKPVDIWAIGCVFAELLTGEPLWPGRSDID  209 (396)
T ss_pred             CCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence            999999999999999999999999976544

>KOG0575|consensus

Probab=99.74  E-value=8.8e-19  Score=181.98  Aligned_cols=162  Identities=28%  Similarity=0.426  Sum_probs=112.2

Q ss_pred             ccccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC--HHHHHH------HHHHHHhhcCCCCeee
Q psy16343         39 SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS--RSRVFK------EVETFHHCQGHPNIIQ  110 (539)
Q Consensus        39 ~~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~--~~~~~~------Ei~~l~~~~~HpnIv~  110 (539)
                      -+..+.|...|++..     =..|.+|.++-.....  .+|  .+....-  .-++.+      -|+....+.+..||.-
T Consensus        25 ~LGkGgFA~cYe~~~-----~~tge~~A~KvVpk~~--l~k--~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   25 FLGKGGFARCYEARD-----LDTGEVVAVKVVPKKL--LKK--PKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             eeccCcceEEEEEEE-----cCCCcEEEEEEeehHH--hcC--cchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence            346778888888532     2566777665332211  001  1111100  111222      2334444567788888


Q ss_pred             eeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCC
Q psy16343        111 LLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  163 (539)
Q Consensus       111 l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~  163 (539)
                      ++|.|..+..                           +.|..+|||||||..|+++   +...++||+|||||..+..+.
T Consensus        96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen   96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCcc
Confidence            8888876542                           4577899999999999999   677889999999986655432


Q ss_pred             CCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        164 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       164 ~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ..        -.|.||||.|+|||++.      .++++.-+||||+|||+|.||+|++||...
T Consensus       173 Er--------k~TlCGTPNYIAPEVl~------k~gHsfEvDiWSlGcvmYtLL~G~PPFetk  221 (592)
T KOG0575|consen  173 ER--------KKTLCGTPNYIAPEVLN------KSGHSFEVDIWSLGCVMYTLLVGRPPFETK  221 (592)
T ss_pred             cc--------cceecCCCcccChhHhc------cCCCCCchhhhhhhhHHHhhhhCCCCcccc
Confidence            22        23779999999999986      477889999999999999999999999765

>KOG1033|consensus

Probab=99.74  E-value=1.2e-18  Score=178.75  Aligned_cols=140  Identities=29%  Similarity=0.446  Sum_probs=102.3

Q ss_pred             hCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCccc
Q psy16343        252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  331 (539)
Q Consensus       252 ~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~  331 (539)
                      +|.+||||||.||.+..++   .+||.||||........+.  .......+.-+||++||+||.|.+      +.|+.++
T Consensus       375 k~~ihrdlkp~nif~~~d~---q~kIgDFgl~ts~~~~~~~--~~~~a~~t~~~gt~~YmsPEQi~g------~~y~~kv  443 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDD---QLKIGDFGLVTSQDKDETV--APAAASHTQQVGTLLYMSPEQIRG------QQYSEKV  443 (516)
T ss_pred             ccchhhhccccccccccch---hhhhhhhhheeecccCCcc--cchhhhhhhcccccccCCHHHHhh------hhhhhhc
Confidence            7899999999999996544   5899999998754332210  001123456789999999999974      6799999


Q ss_pred             chhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccC
Q psy16343        332 DLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK  410 (539)
Q Consensus       332 DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~  410 (539)
                      ||||||+|||+|+. =..+|.-                  ...+..|+.|.+  |+..|.. -++..+|+.+||...|.+
T Consensus       444 dIyaLGlil~EL~~~f~T~~er------------------~~t~~d~r~g~i--p~~~~~d-~p~e~~ll~~lls~~p~~  502 (516)
T KOG1033|consen  444 DIYALGLILAELLIQFSTQFER------------------IATLTDIRDGII--PPEFLQD-YPEEYTLLQQLLSPSPEE  502 (516)
T ss_pred             chhhHHHHHHHHHHHhccHHHH------------------HHhhhhhhcCCC--ChHHhhc-CcHHHHHHHHhcCCCccc
Confidence            99999999999997 3344421                  124455666654  3333333 345679999999999999


Q ss_pred             CCCHHHHhcCCCc
Q psy16343        411 RLSAASVLKHPWI  423 (539)
Q Consensus       411 R~ta~e~l~Hpw~  423 (539)
                      ||++.+.-.|+|.
T Consensus       503 RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  503 RPSAIEVALHEFL  515 (516)
T ss_pred             CchHHHHhhhhhc
Confidence            9998888888875

>KOG0612|consensus

Probab=99.73  E-value=1.8e-18  Score=189.45  Aligned_cols=120  Identities=28%  Similarity=0.570  Sum_probs=97.2

Q ss_pred             HHHHHhhcCCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCe
Q psy16343         96 VETFHHCQGHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPV  148 (539)
Q Consensus        96 i~~l~~~~~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~i  148 (539)
                      +.+...+++..|+.-++||+..++.                           ..|.+++|||||||+|||+   +..+++
T Consensus       138 v~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHi  214 (1317)
T KOG0612|consen  138 VQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHI  214 (1317)
T ss_pred             HHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcE
Confidence            3445567788999999999988763                           2377899999999999999   778899


Q ss_pred             EEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        149 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       149 kl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||+|||-+-.+..+....       ..+.+|||-|++||++.... .....|++-||+||+||++||||+|..|||++
T Consensus       215 kLADFGsClkm~~dG~V~-------s~~aVGTPDYISPEvLqs~~-~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad  284 (1317)
T KOG0612|consen  215 KLADFGSCLKMDADGTVR-------SSVAVGTPDYISPEVLQSQG-DGKGEYGRECDWWSLGVFMYEMLYGETPFYAD  284 (1317)
T ss_pred             eeccchhHHhcCCCCcEE-------eccccCCCCccCHHHHHhhc-CCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence            999999875555444332       23568999999999987533 23467999999999999999999999999975

>KOG0588|consensus

Probab=99.72  E-value=5.8e-18  Score=176.74  Aligned_cols=106  Identities=36%  Similarity=0.558  Sum_probs=83.2

Q ss_pred             CCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEecccc
Q psy16343        104 GHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG  156 (539)
Q Consensus       104 ~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~  156 (539)
                      +|..+.-+++|..+++.                           ++|..+|+||||||||+||+   ....|||+|||+|
T Consensus        83 ~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd---~~~nIKIADFGMA  159 (786)
T KOG0588|consen   83 NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD---VKNNIKIADFGMA  159 (786)
T ss_pred             cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh---cccCEeeecccee
Confidence            46667777777776653                           45677899999999999994   4444999999998


Q ss_pred             ccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        157 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       157 ~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .. .....        .+.+.||+|+|.+||++.+     ....+.++||||+|||||.||+|+.||.++
T Consensus       160 sL-e~~gk--------lLeTSCGSPHYA~PEIV~G-----~pYdG~~sDVWSCGVILfALLtG~LPFdDd  215 (786)
T KOG0588|consen  160 SL-EVPGK--------LLETSCGSPHYAAPEIVSG-----RPYDGRPSDVWSCGVILFALLTGKLPFDDD  215 (786)
T ss_pred             ec-ccCCc--------cccccCCCcccCCchhhcC-----CCCCCCccccchhHHHHHHHHhCCCCCCCc
Confidence            54 22221        5678999999999999964     123457899999999999999999999854

>KOG1164|consensus

Probab=99.71  E-value=1.6e-16  Score=162.24  Aligned_cols=213  Identities=23%  Similarity=0.265  Sum_probs=130.6

Q ss_pred             hhcccCceeceeCceEEEEEEEccCC-cEEEEEEeccCCCCCHHHHHHHHHHHHhhcC---CCCeeeeeeeec-cccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTE-LEYAVKIIDKLPGHSRSRVFKEVETFHHCQG---HPNIIQLLEYYE-DDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~-~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~---HpnIv~l~~~~~-~~~~~~  122 (539)
                      .|.+ .+.||+|+||.||+|.+..++ ..+|+|+...........+..|+.++..+..   -+++.++++... .+...+
T Consensus        19 ~~~i-~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKL-GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEE-eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence            5665 578999999999999988775 6789998765332222256778888887652   357777777663 222211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|  .+|--.|+.                                  .+....       |                
T Consensus        98 ---iV--M~l~G~sL~----------------------------------dl~~~~-------~----------------  115 (322)
T KOG1164|consen   98 ---IV--MSLLGPSLE----------------------------------DLRKRN-------P----------------  115 (322)
T ss_pred             ---EE--EeccCccHH----------------------------------HHHHhC-------C----------------
Confidence               11  000000000                                  000000       0                


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC--CCCceeccC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ--LSPVKLCDF  280 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~--~~~ikl~DF  280 (539)
                       ...+|.+.++-.                  ..|   .+.++.++|  +.|++||||||+|+++...+.  ...+.|.||
T Consensus       116 -~~~fs~~T~l~i------------------a~q---~l~~l~~lH--~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen  116 -PGRFSRKTVLRI------------------AIQ---NLNALEDLH--SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             -CCCcCHhHHHHH------------------HHH---HHHHHHHHH--hcCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence             011122222111                  111   456677788  999999999999999975432  246899999


Q ss_pred             CCcccccc--CCCC-CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        281 DLGSGIKF--NTSV-HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  354 (539)
Q Consensus       281 Gla~~~~~--~~~~-~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~  354 (539)
                      |+++...+  .... ..+. .+....+.||.-|+++.+-.+      ...+.+-|+||++-++.+|+.|..||.+..
T Consensus       172 Glar~~~~~~~~~~~~~~~-r~~~~~~rGT~ry~S~~~H~~------~e~~r~DDles~~Y~l~el~~g~LPW~~~~  241 (322)
T KOG1164|consen  172 GLARRFKYVGDSGGNLRPP-RPQKGLFRGTLRYASINVHLG------IEQGRRDDLESLFYMLLELLKGSLPWEALE  241 (322)
T ss_pred             CCCccccccCCCCcccccC-CCCccCCCCccccccHHHhCC------CccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence            99983332  1111 0111 011234569999999997653      345678899999999999999999997643

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.70  E-value=1.7e-17  Score=163.39  Aligned_cols=132  Identities=29%  Similarity=0.411  Sum_probs=82.0

Q ss_pred             hhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccC
Q psy16343        241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM  320 (539)
Q Consensus       241 ~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~  320 (539)
                      +..++++|  +.||||.||||+|+++   +..|.+.|.||+.......  .         ......+..|.+||+.....
T Consensus       155 I~lvA~Lh--~~GlVHgdi~~~nfll---~~~G~v~Lg~F~~~~r~g~--~---------~~~~~~~~~~~PPe~~~~~~  218 (288)
T PF14531_consen  155 IRLVANLH--SYGLVHGDIKPENFLL---DQDGGVFLGDFSSLVRAGT--R---------YRCSEFPVAFTPPELESCAG  218 (288)
T ss_dssp             HHHHHHHH--HTTEEEST-SGGGEEE----TTS-EEE--GGGEEETTE--E---------EEGGGS-TTTS-HHHHHHHT
T ss_pred             HHHHHHHh--hcceEecccceeeEEE---cCCCCEEEcChHHHeecCc--e---------eeccCCCcccCChhhhhhhc
Confidence            44566777  9999999999999999   4557799999986543221  1         01123457899999875310


Q ss_pred             C--CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        321 G--PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       321 ~--~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                      .  .....|+.+.|.|+||+++|.|.||..||.......                     ...+.|..-  .++++..++
T Consensus       219 ~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~---------------------~~~~~f~~C--~~~Pe~v~~  275 (288)
T PF14531_consen  219 QFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEA---------------------DPEWDFSRC--RDMPEPVQF  275 (288)
T ss_dssp             SCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGS---------------------TSGGGGTTS--S---HHHHH
T ss_pred             ccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccc---------------------cccccchhc--CCcCHHHHH
Confidence            0  011247788999999999999999999997643211                     000122221  268899999


Q ss_pred             HHHHhccccccCC
Q psy16343        399 LIRRLLVKDARKR  411 (539)
Q Consensus       399 li~~lL~~dP~~R  411 (539)
                      ||.+||+.||.+|
T Consensus       276 LI~~lL~~~~~~R  288 (288)
T PF14531_consen  276 LIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHT-SSGGGS
T ss_pred             HHHHHccCCcccC
Confidence            9999999999988

>KOG0604|consensus

Probab=99.70  E-value=7.2e-18  Score=161.11  Aligned_cols=91  Identities=48%  Similarity=0.909  Sum_probs=77.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|.||||||||+|......+-.+||+||||++.-...         ..+.+++-||.|.|||++..      ..|
T Consensus       176 ~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~---------~~L~TPc~TPyYvaPevlg~------eKy  240 (400)
T KOG0604|consen  176 YLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP---------GDLMTPCFTPYYVAPEVLGP------EKY  240 (400)
T ss_pred             HHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC---------ccccCCcccccccCHHHhCc------hhc
Confidence            567779999999999999998888889999999998542211         14667889999999999863      569


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +..||+||+||++|.||+|.+||+..
T Consensus       241 dkscdmwSlgVimYIlLCGyPPFYS~  266 (400)
T KOG0604|consen  241 DKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_pred             CCCCCccchhHHHHHhhcCCCccccc
Confidence            99999999999999999999999863

>KOG0591|consensus

Probab=99.70  E-value=6e-18  Score=160.42  Aligned_cols=84  Identities=39%  Similarity=0.734  Sum_probs=71.2

Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|+||||||.||.+   +..+.+||+|||+++.+.....        ...+.+|||.||+||.+.      .++|+.++|
T Consensus       148 ~VmHRDIKPaNIFl---~~~gvvKLGDfGL~r~l~s~~t--------fA~S~VGTPyYMSPE~i~------~~~Y~~kSD  210 (375)
T KOG0591|consen  148 TVMHRDIKPANIFL---TANGVVKLGDFGLGRFLSSKTT--------FAHSLVGTPYYMSPERIH------ESGYNFKSD  210 (375)
T ss_pred             ceeeccCcchheEE---cCCCceeeccchhHhHhcchhH--------HHHhhcCCCcccCHHHHh------cCCCCcchh
Confidence            39999999999999   5667899999999976543322        123568999999999986      478999999


Q ss_pred             hhhhhHHHHHHHhCCCCCCCC
Q psy16343        206 LWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~  226 (539)
                      |||+||++|||..-.+||+|.
T Consensus       211 iWslGCllyEMcaL~~PF~g~  231 (375)
T KOG0591|consen  211 IWSLGCLLYEMCALQSPFYGD  231 (375)
T ss_pred             HHHHHHHHHHHHhcCCCcccc
Confidence            999999999999999999985

>KOG1165|consensus

Probab=99.70  E-value=2.1e-17  Score=160.00  Aligned_cols=211  Identities=22%  Similarity=0.364  Sum_probs=139.2

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .-.|++ |+.||+|+||+.+.|.+..+++.||||.-.+..  ..-++..|-...+.+.+.++|.+.+-+-+.+.      
T Consensus        27 G~hyrV-GkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~------   97 (449)
T KOG1165|consen   27 GPHYRV-GKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK------   97 (449)
T ss_pred             ccccee-ccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccc------
Confidence            345665 889999999999999999999999999865432  12356667777777777899999887766653      


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                               -|||+           +|. ||-.+            ..+++.||.                  .++.+  
T Consensus        98 ---------~NiLV-----------idL-LGPSL------------EDLFD~CgR------------------~FSvK--  124 (449)
T KOG1165|consen   98 ---------YNILV-----------IDL-LGPSL------------EDLFDLCGR------------------RFSVK--  124 (449)
T ss_pred             ---------hhhhh-----------hhh-hCcCH------------HHHHHHhcC------------------cccHH--
Confidence                     24443           110 00000            023333332                  11111  


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC--CCCceeccCCCc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ--LSPVKLCDFDLG  283 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~--~~~ikl~DFGla  283 (539)
                        .+.+|..+|                        +..+.+.|  .+..|.|||||+|+||...+.  ...|-|+|||+|
T Consensus       125 --TV~miA~Qm------------------------i~rie~vH--~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA  176 (449)
T KOG1165|consen  125 --TVAMIAKQM------------------------ITRIEYVH--EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA  176 (449)
T ss_pred             --hHHHHHHHH------------------------HHHHHHHH--hcceeecccCccceeecCCCCCCCceEEEEeccch
Confidence              122233333                        34567788  889999999999999976543  235889999999


Q ss_pred             cccccCC-CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        284 SGIKFNT-SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  354 (539)
Q Consensus       284 ~~~~~~~-~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~  354 (539)
                      +...... ..+-+-.  ......||.-||+--.-.   |   ..-+.+-|+=|||=++...|.|..||.|-.
T Consensus       177 K~YrDp~TkqHIPYr--E~KSLsGTARYMSINTHl---G---rEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  177 KEYRDPKTKQHIPYR--EHKSLSGTARYMSINTHL---G---REQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             hhhcCccccccCccc--cccccccceeeeEeeccc---c---chhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence            8654432 2222211  234567999999865432   3   234567899999999999999999999853

>KOG0599|consensus

Probab=99.69  E-value=7.8e-18  Score=158.87  Aligned_cols=94  Identities=37%  Similarity=0.687  Sum_probs=79.2

Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+.|.+.||||||||||||+   +.+..++|+|||++..+....         .+...||||+|+|||.+.--+.....+
T Consensus       137 eylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~~l~~Ge---------kLrelCGTPgYLAPEtikC~m~e~~pG  204 (411)
T KOG0599|consen  137 EYLHARNIVHRDLKPENILL---DDNMNIKISDFGFACQLEPGE---------KLRELCGTPGYLAPETIKCSMYENHPG  204 (411)
T ss_pred             HHHHHhhhhhcccChhheee---ccccceEEeccceeeccCCch---------hHHHhcCCCcccChhheeeecccCCCC
Confidence            35566789999999999999   667789999999987655443         344679999999999987655556788


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      |+..+|.||+|||+|.||.|.+||..
T Consensus       205 Ys~EVD~Wa~GVImyTLLaGcpPFwH  230 (411)
T KOG0599|consen  205 YSKEVDEWACGVIMYTLLAGCPPFWH  230 (411)
T ss_pred             ccchhhHHHHHHHHHHHHcCCCchhH
Confidence            99999999999999999999999953

>KOG0033|consensus

Probab=99.69  E-value=1.4e-17  Score=155.04  Aligned_cols=91  Identities=37%  Similarity=0.718  Sum_probs=77.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|||||+||+|+++...+....+||+|||++..+... .        ....++|||.||+||+++.      ..|
T Consensus       125 yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-~--------~~~G~~GtP~fmaPEvvrk------dpy  189 (355)
T KOG0033|consen  125 YCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-E--------AWHGFAGTPGYLSPEVLKK------DPY  189 (355)
T ss_pred             HHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc-c--------ccccccCCCcccCHHHhhc------CCC
Confidence            456779999999999999999888889999999998554311 1        2346789999999999863      678


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +..+|+|+.|||+|.||.|.+||.+.
T Consensus       190 ~kpvDiW~cGViLfiLL~G~~PF~~~  215 (355)
T KOG0033|consen  190 SKPVDIWACGVILYILLVGYPPFWDE  215 (355)
T ss_pred             CCcchhhhhhHHHHHHHhCCCCCCCc
Confidence            99999999999999999999999875

>KOG1024|consensus

Probab=99.69  E-value=4.7e-17  Score=160.45  Aligned_cols=144  Identities=22%  Similarity=0.313  Sum_probs=106.3

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      +.+++.++|  +.||||.||-..|.+++   +.-.+||+|=.+++.+-...- +. .++..    .-..-||+||-+.. 
T Consensus       405 la~am~hlh--~~~ViHkDiAaRNCvId---d~LqVkltDsaLSRDLFP~DY-hc-LGDnE----nRPvkWMslEal~n-  472 (563)
T KOG1024|consen  405 LAMAMEHLH--NHGVIHKDIAARNCVID---DQLQVKLTDSALSRDLFPGDY-HC-LGDNE----NRPVKWMSLEALQN-  472 (563)
T ss_pred             HHHHHHHHH--hcCcccchhhhhcceeh---hheeEEeccchhccccCcccc-cc-cCCCC----CCcccccCHHHHhh-
Confidence            445555555  99999999999999994   445699999999885533221 11 11100    11246999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                           ..|+.++|+||+||+++||++ |+.|+..-+               +.++...+..| |++..+  -+.++++..
T Consensus       473 -----~~yssasDvWsfGVllWELmtlg~~PyaeID---------------PfEm~~ylkdG-yRlaQP--~NCPDeLf~  529 (563)
T KOG1024|consen  473 -----SHYSSASDVWSFGVLLWELMTLGKLPYAEID---------------PFEMEHYLKDG-YRLAQP--FNCPDELFT  529 (563)
T ss_pred             -----hhhcchhhhHHHHHHHHHHHhcCCCCccccC---------------HHHHHHHHhcc-ceecCC--CCCcHHHHH
Confidence                 579999999999999999987 899997543               34566666655 333322  367899999


Q ss_pred             HHHHhccccccCCCCHHHHh
Q psy16343        399 LIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l  418 (539)
                      ++.-|...+|++||+.+|+.
T Consensus       530 vMacCWallpeeRPsf~Qlv  549 (563)
T KOG1024|consen  530 VMACCWALLPEERPSFSQLV  549 (563)
T ss_pred             HHHHHHhcCcccCCCHHHHH
Confidence            99999999999999999875

>KOG0614|consensus

Probab=99.68  E-value=1.5e-17  Score=168.48  Aligned_cols=113  Identities=36%  Similarity=0.589  Sum_probs=91.4

Q ss_pred             HHHHHhhcCCCCeeeeeeeecccc---------------------------cccccCCeeeecCCCCCeeccCCCCCCCe
Q psy16343         96 VETFHHCQGHPNIIQLLEYYEDDE---------------------------NHERHKRIAHRDLKPENILCVHPDQLSPV  148 (539)
Q Consensus        96 i~~l~~~~~HpnIv~l~~~~~~~~---------------------------~~~~~~~IiHrDLK~enill~~~~~~~~i  148 (539)
                      +++.+..++...|.-|++.|-.++                           .+.|.++||.|||||||+++   +..+-+
T Consensus       483 vrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~  559 (732)
T KOG0614|consen  483 VRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYL  559 (732)
T ss_pred             HHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCce
Confidence            445555566677777776665443                           24578899999999999999   666779


Q ss_pred             EEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        149 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       149 kl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||.|||+++.+..+.         ..++.||||+|.|||++.+      .+++.++|.||+|+++||||+|.+||.+.
T Consensus       560 KLVDFGFAKki~~g~---------KTwTFcGTpEYVAPEIILn------KGHD~avDyWaLGIli~ELL~G~pPFs~~  622 (732)
T KOG0614|consen  560 KLVDFGFAKKIGSGR---------KTWTFCGTPEYVAPEIILN------KGHDRAVDYWALGILIYELLTGSPPFSGV  622 (732)
T ss_pred             EEeehhhHHHhccCC---------ceeeecCCcccccchhhhc------cCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence            999999997765443         3468899999999999864      67899999999999999999999999875

>KOG0690|consensus

Probab=99.68  E-value=3.7e-17  Score=157.63  Aligned_cols=108  Identities=34%  Similarity=0.639  Sum_probs=88.5

Q ss_pred             hhcCCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEec
Q psy16343        101 HCQGHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDF  153 (539)
Q Consensus       101 ~~~~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Df  153 (539)
                      .++.|..++-+++|-..++.                           +.|+++||.||||.||+++   +..+++||+||
T Consensus       236 sFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDF  312 (516)
T KOG0690|consen  236 SFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDF  312 (516)
T ss_pred             hhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeec
Confidence            34578899999988766653                           3467789999999999999   77788999999


Q ss_pred             ccccc-CcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        154 DLGSG-IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       154 gl~~~-~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |+++. +....         ...+.||||+|+|||++.      ...|++++|+|.+||++|||++|+.||+..
T Consensus       313 GLCKE~I~~g~---------t~kTFCGTPEYLAPEVle------DnDYgraVDWWG~GVVMYEMmCGRLPFyn~  371 (516)
T KOG0690|consen  313 GLCKEEIKYGD---------TTKTFCGTPEYLAPEVLE------DNDYGRAVDWWGVGVVMYEMMCGRLPFYNK  371 (516)
T ss_pred             ccchhcccccc---------eeccccCChhhcCchhhc------cccccceeehhhhhHHHHHHHhccCccccc
Confidence            99853 22111         234789999999999985      467999999999999999999999999864

>KOG4158|consensus

Probab=99.67  E-value=2e-16  Score=156.50  Aligned_cols=155  Identities=31%  Similarity=0.481  Sum_probs=101.8

Q ss_pred             hhhHHHhhhhhCCCCCCCCCCceeecCCC-CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccC
Q psy16343        242 CQEILFHSIQQGIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM  320 (539)
Q Consensus       242 ~~~~~~h~h~~gIvHRDlKpeNiL~~~~~-~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~  320 (539)
                      +++.++|  ++||.|||||.+|||+.-++ ....+.|+|||.+-..... +..-+-. +--...-|...-|||||.....
T Consensus       352 Eav~hL~--~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h-Glqlpy~-S~~Vd~GGNa~lmAPEi~ta~P  427 (598)
T KOG4158|consen  352 EAVTHLH--KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH-GLQLPYE-SDEVDLGGNAKLMAPEIATAVP  427 (598)
T ss_pred             HHHHHHH--HccchhhcccccceEEEecCCCCcEEEEcccceeeecccc-ccccccc-cccccCCCcceecchhhhhcCC
Confidence            4455555  99999999999999996443 3455789999986432211 0000000 0011334777899999998765


Q ss_pred             CCCCC-CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhc-CCCCCCCCCCCCCCHHHHH
Q psy16343        321 GPEAS-GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       321 ~~~~~-~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~~~~~~~s~~~~d  398 (539)
                      |+... .| .++|.|++|-+.||.+...-||++....-  +       .    + ...++ .-+.+|    +.+++.+++
T Consensus       428 Gp~avvny-~kAD~WA~GalaYEIfg~~NPFY~rGem~--L-------~----~-r~Yqe~qLPalp----~~vpp~~rq  488 (598)
T KOG4158|consen  428 GPNAVVNY-EKADTWAAGALAYEIFGRSNPFYKRGEML--L-------D----T-RTYQESQLPALP----SRVPPVARQ  488 (598)
T ss_pred             CCceeecc-chhhhhhhhhhHHHHhccCCcccccchhe--e-------c----h-hhhhhhhCCCCc----ccCChHHHH
Confidence            54322 23 47899999999999999999999742110  0       0    0 01111 123334    468999999


Q ss_pred             HHHHhccccccCCCCH---HHHhc
Q psy16343        399 LIRRLLVKDARKRLSA---ASVLK  419 (539)
Q Consensus       399 li~~lL~~dP~~R~ta---~e~l~  419 (539)
                      |+..+|+.||++|+++   +.+|+
T Consensus       489 lV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  489 LVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             HHHHHhcCCccccCCccHHHhHHH
Confidence            9999999999999984   45554

>KOG0696|consensus

Probab=99.67  E-value=8.3e-17  Score=159.47  Aligned_cols=90  Identities=34%  Similarity=0.617  Sum_probs=75.5

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|.++||.||||.+|+++   +..+++||+|||+++.-.....        ...+.+|||.|+|||++..      +.|+
T Consensus       466 Lh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~--------TTkTFCGTPdYiAPEIi~Y------qPYg  528 (683)
T KOG0696|consen  466 LHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGV--------TTKTFCGTPDYIAPEIIAY------QPYG  528 (683)
T ss_pred             hhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCc--------ceeeecCCCcccccceEEe------cccc
Confidence            467799999999999999   6678899999999865332221        2347899999999999864      6799


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~  228 (539)
                      .++|+||+||+|||||.|++||.|+..
T Consensus       529 ksvDWWa~GVLLyEmlaGQpPFdGeDE  555 (683)
T KOG0696|consen  529 KSVDWWAFGVLLYEMLAGQPPFDGEDE  555 (683)
T ss_pred             cchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence            999999999999999999999998643

>KOG0597|consensus

Probab=99.67  E-value=2.9e-17  Score=168.41  Aligned_cols=89  Identities=46%  Similarity=0.844  Sum_probs=75.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+|||+||.||++   +..+.+|+||||+++.+..++.        .+...-|||-|||||++.      .+.|
T Consensus       115 yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~--------vltsikGtPlYmAPElv~------e~py  177 (808)
T KOG0597|consen  115 YLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS--------VLTSIKGTPLYMAPELVE------EQPY  177 (808)
T ss_pred             HHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce--------eeeeccCcccccCHHHHc------CCCc
Confidence            4577899999999999999   6677899999999987655433        233456999999999985      4789


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +..+|+||+|||+|||.+|++||++.
T Consensus       178 d~~sDlWslGcilYE~~~G~PPF~a~  203 (808)
T KOG0597|consen  178 DHTSDLWSLGCILYELYVGQPPFYAR  203 (808)
T ss_pred             cchhhHHHHHHHHHHHhcCCCCchHH
Confidence            99999999999999999999999764

>KOG1163|consensus

Probab=99.65  E-value=9.5e-17  Score=149.23  Aligned_cols=246  Identities=20%  Similarity=0.278  Sum_probs=147.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||.|+||.+|.|.+...|++||||+-.....+  .++..|..+...+++...|..+..|..+...       
T Consensus        16 ky~l-vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~y-------   85 (341)
T KOG1163|consen   16 KYKL-VRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDY-------   85 (341)
T ss_pred             ceEE-EEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhcccccc-------
Confidence            4555 36799999999999999999999999986543322  3567788887777766777776665544321       


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                              |+++           .|.  - +-..          ..+++.|..                  .++.+    
T Consensus        86 --------nvlV-----------MdL--L-GPsL----------EdLfnfC~R------------------~ftmk----  111 (341)
T KOG1163|consen   86 --------NVLV-----------MDL--L-GPSL----------EDLFNFCSR------------------RFTMK----  111 (341)
T ss_pred             --------ceee-----------eec--c-CccH----------HHHHHHHhh------------------hhhHH----
Confidence                    2221           111  0 0000          012222111                  11111    


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                         .++  ||                ..|   ++..+.|.|  .++.|||||||+|+|..-.-....+-++|||+|+...
T Consensus       112 ---TvL--ML----------------aDQ---ml~RiEyvH--~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen  112 ---TVL--ML----------------ADQ---MLSRIEYVH--LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             ---hHH--HH----------------HHH---HHHHHHHHH--hhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence               111  11                112   445677888  8899999999999999765555678999999998654


Q ss_pred             cCC-CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNT-SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~-~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ... ..+-+-..  -....||.-|.+---..   |   ..-+.+-|+=|+|-+|-....|..||+|-...          
T Consensus       166 d~~t~~HIpyre--~r~ltGTaRYASinAh~---g---~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~----------  227 (341)
T KOG1163|consen  166 DIRTRQHIPYRE--DRNLTGTARYASINAHL---G---IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA----------  227 (341)
T ss_pred             cccccccCcccc--CCccceeeeehhhhhhh---h---hhhhhhhhhhhhcceeeeeecCCCcccccchh----------
Confidence            322 11211111  12457999998754332   1   12345679999999999999999999985422          


Q ss_pred             hhhHHHHHHHHhcCCCCCCCC-CCCCCCHHHHHHHHHh
Q psy16343        367 HACQEILFHSIQQGHYDFPEG-EWSTISDEAKDLIRRL  403 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~-~~~~~s~~~~dli~~l  403 (539)
                        .+..-+++|...+...|.+ ..+.++.|.--.+.-|
T Consensus       228 --tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~  263 (341)
T KOG1163|consen  228 --TKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYC  263 (341)
T ss_pred             --hHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHH
Confidence              1233455565554443321 1234455555555544

>KOG0658|consensus

Probab=99.65  E-value=4.2e-17  Score=160.40  Aligned_cols=94  Identities=31%  Similarity=0.514  Sum_probs=77.0

Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+.|..+|+||||||+|+|++.  ..+.+||||||.|+.+..+...         .+.+-|..|.|||++-+     +..
T Consensus       139 ~yLh~~~IcHRDIKPqNlLvD~--~tg~LKicDFGSAK~L~~~epn---------iSYicSRyYRaPELifg-----a~~  202 (364)
T KOG0658|consen  139 AYLHSHGICHRDIKPQNLLVDP--DTGVLKICDFGSAKVLVKGEPN---------ISYICSRYYRAPELIFG-----ATE  202 (364)
T ss_pred             HHHHhcCcccCCCChheEEEcC--CCCeEEeccCCcceeeccCCCc---------eeEEEeccccCHHHHcC-----ccc
Confidence            3557789999999999999953  3467999999998765544322         24577899999998864     578


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGE  229 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~  229 (539)
                      |+.+.||||.|||+.||+-|++-|.|.++.
T Consensus       203 Yt~~IDiWSaGCV~aELl~g~plFpG~s~~  232 (364)
T KOG0658|consen  203 YTTSIDIWSAGCVMAELLKGQPLFPGDSSV  232 (364)
T ss_pred             cCceeEEhhhhHHHHHHhcCCcccCCCCHH
Confidence            999999999999999999999999997643

>KOG0581|consensus

Probab=99.65  E-value=5.2e-17  Score=160.14  Aligned_cols=83  Identities=34%  Similarity=0.668  Sum_probs=70.1

Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      ..||||||||+|||+   +..++|||||||.+..+...          ..-+.+||..|||||-+.      ...|+.++
T Consensus       198 ~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS----------~a~tfvGT~~YMsPERi~------g~~Ys~~s  258 (364)
T KOG0581|consen  198 RKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS----------IANTFVGTSAYMSPERIS------GESYSVKS  258 (364)
T ss_pred             cCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh----------hcccccccccccChhhhc------CCcCCccc
Confidence            589999999999999   66788999999987443221          123678999999999885      46799999


Q ss_pred             chhhhhHHHHHHHhCCCCCCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||||||+.++|+.+|+.||...
T Consensus       259 DIWSLGLsllE~a~GrfP~~~~  280 (364)
T KOG0581|consen  259 DIWSLGLSLLELAIGRFPYPPP  280 (364)
T ss_pred             ceecccHHHHHHhhCCCCCCCc
Confidence            9999999999999999999764

>KOG0667|consensus

Probab=99.65  E-value=7e-17  Score=169.54  Aligned_cols=89  Identities=35%  Similarity=0.510  Sum_probs=74.9

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|||+|||||||||...+.. .|||+|||.++...           ..+.+.+.+..|.|||++.+      ..|+
T Consensus       305 L~~l~IIHcDLKPENILL~~~~r~-~vKVIDFGSSc~~~-----------q~vytYiQSRfYRAPEVILG------lpY~  366 (586)
T KOG0667|consen  305 LHELGIIHCDLKPENILLKDPKRS-RIKVIDFGSSCFES-----------QRVYTYIQSRFYRAPEVILG------LPYD  366 (586)
T ss_pred             HHhCCeeeccCChhheeeccCCcC-ceeEEecccccccC-----------Ccceeeeeccccccchhhcc------CCCC
Confidence            355689999999999999877665 89999999875422           13447889999999999964      5799


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~  228 (539)
                      .+.|+||||||++||++|.+.|+|+..
T Consensus       367 ~~IDmWSLGCIlAEL~tG~PLfpG~ne  393 (586)
T KOG0667|consen  367 TAIDMWSLGCILAELFTGEPLFPGDNE  393 (586)
T ss_pred             CccceeehhhhHHhHhcCccccCCCCH
Confidence            999999999999999999999998753

>KOG0608|consensus

Probab=99.64  E-value=2.1e-16  Score=163.79  Aligned_cols=133  Identities=29%  Similarity=0.622  Sum_probs=97.9

Q ss_pred             HHHHHHHHH------HHHhhcCCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCC
Q psy16343         89 RSRVFKEVE------TFHHCQGHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPE  135 (539)
Q Consensus        89 ~~~~~~Ei~------~l~~~~~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~e  135 (539)
                      ..+++.|..      +...+++..|+..++||...++.                           ..|.+++|||||||+
T Consensus       679 ERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPD  758 (1034)
T KOG0608|consen  679 ERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPD  758 (1034)
T ss_pred             hhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCcc
Confidence            345555543      34456678899999999877652                           237789999999999


Q ss_pred             CeeccCCCCCCCeEEEeccccccCcCCCC--C---------CCCCC-------CCC----------------ccCCCCCC
Q psy16343        136 NILCVHPDQLSPVKLCDFDLGSGIKFNTS--V---------HSPLA-------TPL----------------LLTPVGSA  181 (539)
Q Consensus       136 nill~~~~~~~~ikl~Dfgl~~~~~~~~~--~---------~~~~~-------~~~----------------l~~~~gt~  181 (539)
                      ||||   |..++|||.||||+.|+++.-.  .         .+...       ..+                ....+||+
T Consensus       759 NILI---DrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~  835 (1034)
T KOG0608|consen  759 NILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTP  835 (1034)
T ss_pred             ceEE---ccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCC
Confidence            9999   6778899999999988753211  0         00000       000                01347999


Q ss_pred             CcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  230 (539)
Q Consensus       182 ~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~  230 (539)
                      .|+|||++.      ..+|+..||+||.|||||+|+.|++||.+.....
T Consensus       836 nyiapevl~------r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~  878 (1034)
T KOG0608|consen  836 NYIAPEVLA------RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE  878 (1034)
T ss_pred             cccChHHhc------ccCccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence            999999985      4789999999999999999999999998775543

>KOG0659|consensus

Probab=99.64  E-value=1.6e-16  Score=149.82  Aligned_cols=92  Identities=29%  Similarity=0.467  Sum_probs=74.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.+.|+||||||.|+|+   +..+.+||+|||+++.........        ...+-|.+|.|||++-+     +..|
T Consensus       116 y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~~~~--------~~~V~TRWYRAPELLfG-----sr~Y  179 (318)
T KOG0659|consen  116 YCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPNRIQ--------THQVVTRWYRAPELLFG-----SRQY  179 (318)
T ss_pred             HHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCCccc--------ccceeeeeccChHHhcc-----chhc
Confidence            4577889999999999999   556679999999997654433211        12367899999998754     5779


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~  228 (539)
                      +..+|+||+|||+.||+.|.+-|+|.+.
T Consensus       180 g~~VDmWavGCI~AELllr~P~fpG~sD  207 (318)
T KOG0659|consen  180 GTGVDMWAVGCIFAELLLRVPFFPGDSD  207 (318)
T ss_pred             CCcchhhhHHHHHHHHHccCCCCCCCch
Confidence            9999999999999999999999998753

>KOG0600|consensus

Probab=99.64  E-value=1.2e-16  Score=162.43  Aligned_cols=91  Identities=30%  Similarity=0.455  Sum_probs=76.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      |.|.++|+|||||..||||   ++.+.+||+||||++.+......       .+...+-|.+|.+||++.+     +..|
T Consensus       233 ~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~~~~~~-------~~T~rVvTLWYRpPELLLG-----~t~Y  297 (560)
T KOG0600|consen  233 YCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYTPSGSA-------PYTSRVVTLWYRPPELLLG-----ATSY  297 (560)
T ss_pred             HHhhcCeeeccccccceEE---cCCCCEEeccccceeeccCCCCc-------ccccceEEeeccChHHhcC-----Cccc
Confidence            6688999999999999999   66778999999999755443321       2335678999999999875     5789


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+|||+.||+.|++.|+|.
T Consensus       298 g~aVDlWS~GCIl~El~~gkPI~~G~  323 (560)
T KOG0600|consen  298 GTAVDLWSVGCILAELFLGKPILQGR  323 (560)
T ss_pred             ccceeehhhhHHHHHHHcCCCCcCCc
Confidence            99999999999999999999999885

>KOG0660|consensus

Probab=99.64  E-value=1.1e-16  Score=157.17  Aligned_cols=93  Identities=31%  Similarity=0.550  Sum_probs=75.6

Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+.|+.+|+||||||.|+++   +.+-.+||||||+++.....  ..    ...+...+.|.+|.|||++..     ...
T Consensus       139 KyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLAR~~~~~--~~----~~~mTeYVaTRWYRAPElll~-----~~~  204 (359)
T KOG0660|consen  139 KYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLARYLDKF--FE----DGFMTEYVATRWYRAPELLLN-----SSE  204 (359)
T ss_pred             chhhcccccccccchhheee---ccCCCEEeccccceeecccc--Cc----ccchhcceeeeeecCHHHHhc-----ccc
Confidence            36677899999999999999   44445799999999875433  11    113456788999999998864     467


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |+.++||||+|||+.|||+|++-|.|.
T Consensus       205 Yt~aiDiWSvGCI~AEmL~gkplFpG~  231 (359)
T KOG0660|consen  205 YTKAIDIWSVGCILAEMLTGKPLFPGK  231 (359)
T ss_pred             ccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence            999999999999999999999999885

>KOG0594|consensus

Probab=99.64  E-value=1.3e-16  Score=157.05  Aligned_cols=92  Identities=29%  Similarity=0.508  Sum_probs=75.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||+++   ..+.+||+|||+++....+...        ....++|.+|.|||++.+     ...|
T Consensus       135 ~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDFGlAra~~ip~~~--------yt~evvTlWYRaPEvLlG-----s~~Y  198 (323)
T KOG0594|consen  135 FLHSHGILHRDLKPQNLLIS---SSGVLKLADFGLARAFSIPMRT--------YTPEVVTLWYRAPEVLLG-----STSY  198 (323)
T ss_pred             HHHhCCeecccCCcceEEEC---CCCcEeeeccchHHHhcCCccc--------ccccEEEeeccCHHHhcC-----CCcC
Confidence            56788999999999999994   4678999999999765433332        235578999999999754     3469


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~  228 (539)
                      +..+|+||+|||++||+++++.|.|.+.
T Consensus       199 s~~vDiWs~GcIfaEm~~~~~LFpG~se  226 (323)
T KOG0594|consen  199 STSVDIWSLGCIFAEMFTRRPLFPGDSE  226 (323)
T ss_pred             CCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence            9999999999999999999999998754

>KOG0583|consensus

Probab=99.63  E-value=1.9e-16  Score=163.72  Aligned_cols=89  Identities=45%  Similarity=0.742  Sum_probs=71.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC-
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG-  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~-  199 (539)
                      +.|.++|+|||||||||+++...  +.+||+|||++......        ...+.+.+||+.|+|||++..      .. 
T Consensus       135 y~H~~gi~HRDLK~ENilld~~~--~~~Kl~DFG~s~~~~~~--------~~~l~t~cGsp~Y~aPEvl~~------~~~  198 (370)
T KOG0583|consen  135 YCHSRGIVHRDLKPENILLDGNE--GNLKLSDFGLSAISPGE--------DGLLKTFCGSPAYAAPEVLSG------KGT  198 (370)
T ss_pred             HHHhCCEeeCCCCHHHEEecCCC--CCEEEeccccccccCCC--------CCcccCCCCCcccCCHHHhCC------CCC
Confidence            45778999999999999995432  77999999998543201        114557899999999999864      22 


Q ss_pred             C-CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 Y-DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~-~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      | +.++||||+||+||.|++|..||..
T Consensus       199 Y~g~~aDvWS~GViLy~ml~G~~PF~d  225 (370)
T KOG0583|consen  199 YSGKAADVWSLGVILYVLLCGRLPFDD  225 (370)
T ss_pred             cCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            5 4789999999999999999999975

>KOG0663|consensus

Probab=99.63  E-value=1.5e-16  Score=154.32  Aligned_cols=93  Identities=30%  Similarity=0.435  Sum_probs=76.6

Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+.|...|+|||||+.|+|+   .+.+.+||+|||+|+.+.......        ...+-|.+|.|||++.+     +..
T Consensus       191 k~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR~ygsp~k~~--------T~lVVTLWYRaPELLLG-----~~t  254 (419)
T KOG0663|consen  191 KHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAREYGSPLKPY--------TPLVVTLWYRAPELLLG-----AKT  254 (419)
T ss_pred             HHHhhceeEecccchhheee---ccCCcEEecccchhhhhcCCcccC--------cceEEEeeecCHHHhcC-----Ccc
Confidence            36677789999999999999   556779999999998765443221        13357899999999864     567


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~  228 (539)
                      |++++|+||+|||+.||+++++.|+|.+.
T Consensus       255 yst~iDMWSvGCI~aE~l~~kPlf~G~sE  283 (419)
T KOG0663|consen  255 YSTAVDMWSVGCIFAELLTQKPLFPGKSE  283 (419)
T ss_pred             cCcchhhhhHHHHHHHHHhcCCCCCCCch
Confidence            99999999999999999999999998753

>KOG0986|consensus

Probab=99.62  E-value=2.4e-16  Score=158.17  Aligned_cols=87  Identities=38%  Similarity=0.636  Sum_probs=73.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      |.|..+||.|||||||||+   |..++++|+|.|++..+.....         ....+||.+|||||++.+      ..|
T Consensus       302 hlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g~~---------~~~rvGT~GYMAPEvl~n------e~Y  363 (591)
T KOG0986|consen  302 HLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEGKP---------IRGRVGTVGYMAPEVLQN------EVY  363 (591)
T ss_pred             HHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCCCc---------cccccCcccccCHHHHcC------Ccc
Confidence            5677799999999999999   7788999999999866543322         224589999999999974      459


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.+.|+||+||++|+|+.|+.||..
T Consensus       364 ~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  364 DFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             cCCccHHHHHhHHHHHHcccCchhh
Confidence            9999999999999999999999965

>KOG0578|consensus

Probab=99.62  E-value=6.7e-16  Score=159.44  Aligned_cols=88  Identities=36%  Similarity=0.614  Sum_probs=73.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|||||||.+|||+..   .+.+||+||||+..+.......        .+.+|||.|||||++.      ...|
T Consensus       384 fLH~~gIiHrDIKSDnILL~~---~g~vKltDFGFcaqi~~~~~KR--------~TmVGTPYWMAPEVvt------rk~Y  446 (550)
T KOG0578|consen  384 FLHARGIIHRDIKSDNILLTM---DGSVKLTDFGFCAQISEEQSKR--------STMVGTPYWMAPEVVT------RKPY  446 (550)
T ss_pred             HHHhcceeeeccccceeEecc---CCcEEEeeeeeeeccccccCcc--------ccccCCCCccchhhhh------hccc
Confidence            457889999999999999954   4559999999986554332211        2678999999999986      3679


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||||++++||+.|.+||..
T Consensus       447 G~KVDIWSLGIMaIEMveGEPPYln  471 (550)
T KOG0578|consen  447 GPKVDIWSLGIMAIEMVEGEPPYLN  471 (550)
T ss_pred             CccccchhhhhHHHHHhcCCCCccC
Confidence            9999999999999999999999974

>KOG0661|consensus

Probab=99.61  E-value=1.6e-16  Score=160.49  Aligned_cols=96  Identities=29%  Similarity=0.459  Sum_probs=79.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      |.|.+++.||||||||||+..   ...+||+|||+|+.+.....         ...++.|.+|+|||++..     ...|
T Consensus       125 hiHk~GfFHRDlKPENiLi~~---~~~iKiaDFGLARev~SkpP---------YTeYVSTRWYRAPEvLLr-----s~~Y  187 (538)
T KOG0661|consen  125 HIHKHGFFHRDLKPENILISG---NDVIKIADFGLAREVRSKPP---------YTEYVSTRWYRAPEVLLR-----SGYY  187 (538)
T ss_pred             HHHhcCcccccCChhheEecc---cceeEecccccccccccCCC---------cchhhhcccccchHHhhh-----cccc
Confidence            567789999999999999943   56799999999987653322         225688999999999863     4679


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  233 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~  233 (539)
                      +.++|+||+|||++|+.+-++.|+|.+..|..|
T Consensus       188 s~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~  220 (538)
T KOG0661|consen  188 SSPVDMWAVGCIMAELYSLRPLFPGASEIDQIY  220 (538)
T ss_pred             CCchHHHHHHHHHHHHHHhcccCCCCcHHHHHH
Confidence            999999999999999999999999987655443

>KOG0596|consensus

Probab=99.61  E-value=3.1e-16  Score=160.82  Aligned_cols=95  Identities=31%  Similarity=0.575  Sum_probs=73.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC---
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA---  197 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~---  197 (539)
                      ..|..+|||.||||.|+|++    .+.+||+|||++..+..++...      .-.+-+||+.||+||.+......+.   
T Consensus       475 ~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DTTsI------~kdsQvGT~NYMsPEAl~~~~s~~~~~~  544 (677)
T KOG0596|consen  475 TIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDTTSI------VKDSQVGTVNYMSPEALTDMSSSRENGK  544 (677)
T ss_pred             HHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCccccce------eeccccCcccccCHHHHhhccccccCCC
Confidence            34667999999999999985    3569999999998776655432      1235689999999997753322211   


Q ss_pred             --CCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        198 --SGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       198 --~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                        -..++++||||+|||||+|++|++||..
T Consensus       545 ~k~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  545 SKIKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             cceeecCccchhhhhhHHHHHHhcCCchHH
Confidence              2267899999999999999999999965

>KOG0601|consensus

Probab=99.61  E-value=1.3e-15  Score=159.36  Aligned_cols=317  Identities=23%  Similarity=0.245  Sum_probs=210.9

Q ss_pred             Cceece--eCceEEEEEEE--ccCCcEEEEEEec--cCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc------
Q psy16343         53 GEILGK--GAYASVQTCVN--ILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN------  120 (539)
Q Consensus        53 ~~~LG~--G~fG~V~~~~~--~~t~~~vAvK~i~--k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~------  120 (539)
                      ...+|.  |.+|.|+.+..  ..++..+|+|.=+  -.......+-.+|....++..-|+|.++.+..++....      
T Consensus       119 ~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE  198 (524)
T KOG0601|consen  119 SSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTE  198 (524)
T ss_pred             ccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeec
Confidence            356899  99999999988  8899999999732  22222334456777777777779999997666554321      


Q ss_pred             --------------------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCC
Q psy16343        121 --------------------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  162 (539)
Q Consensus       121 --------------------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~  162 (539)
                                                            +.|...++|-|+||+|+.+..+.  ...++.|||+...+...
T Consensus       199 ~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~--~s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  199 LCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW--TSCKLTDFGLVSKISDG  276 (524)
T ss_pred             cccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc--ceeecCCcceeEEccCC
Confidence                                                  33566899999999999984331  56788999876544432


Q ss_pred             CCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC-----CCCCCCccCcc
Q psy16343        163 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN-----CGEDCGWQRGE  237 (539)
Q Consensus       163 ~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~-----~~~~~~~~~~~  237 (539)
                      .-.....   .....-|...|++||..+.       .++...|++++|.++.+..+|..+....     ...+..++..+
T Consensus       277 ~~~~~~~---~~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e  346 (524)
T KOG0601|consen  277 NFSSVFK---VSKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE  346 (524)
T ss_pred             cccccee---eeecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence            2111000   1122346678999998864       4667899999999999988876443222     11111111111


Q ss_pred             cc--------------------------chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        238 TC--------------------------HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       238 ~~--------------------------~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                      .|                          ++.++.+.|  ++.++|+|+||+||++.+++  ...++.|||.++.+.....
T Consensus       347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~--s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~~~~  422 (524)
T KOG0601|consen  347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH--SKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAFSSG  422 (524)
T ss_pred             hhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc--chhhhcccccccceeeccch--hhhhccccccccccceecc
Confidence            11                          223334455  99999999999999997654  5579999998875433221


Q ss_pred             CCCCCCCCCccccccCcccc-cchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        292 VHSPLATPLLLTPVGSAEFM-APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~-APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                                 ...++-.+. ..|++..     ...|..++|++|||..+++.++|.+ +....                
T Consensus       423 -----------~~~~~~r~~p~~~~~~e-----~~~~~~~~~~~sl~~~~~e~~~~~~-ls~~~----------------  469 (524)
T KOG0601|consen  423 -----------VFHHIDRLYPIAEILLE-----DYPHLSKADIFSLGLSVDEAITGSP-LSESG----------------  469 (524)
T ss_pred             -----------cccccccccccchhhcc-----ccccccccccccccccccccccCcc-cCccc----------------
Confidence                       223333444 3666652     4567789999999999999999864 22111                


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                       .....|..+.+....    ..+.++..+.+.++..|+..|+.+.++..|+=|
T Consensus       470 -~~~~~i~~~~~p~~~----~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  470 -VQSLTIRSGDTPNLP----GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             -ccceeeecccccCCC----chHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence             023345566554433    345889999999999999999999999888754

>KOG1240|consensus

Probab=99.61  E-value=3e-16  Score=171.86  Aligned_cols=152  Identities=26%  Similarity=0.319  Sum_probs=93.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCC-CccccccC----cccccch
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP-LLLTPVGS----AEFMAPE  314 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~-~~~t~~GT----~~Y~APE  314 (539)
                      ++.++.-+|  ..||+|.|||.||||+++=+   =+.|+||.--+..     + -+-.++ ....+.-|    ..|+|||
T Consensus       129 LL~al~qcH--~~gVcHGDIKsENILiTSWN---W~~LtDFAsFKPt-----Y-LPeDNPadf~fFFDTSrRRtCYiAPE  197 (1431)
T KOG1240|consen  129 LLKALSQCH--KLGVCHGDIKSENILITSWN---WLYLTDFASFKPT-----Y-LPEDNPADFTFFFDTSRRRTCYIAPE  197 (1431)
T ss_pred             HHHHHHHHH--HcCccccccccceEEEeeec---hhhhhcccccCCc-----c-CCCCCcccceEEEecCCceeeecChH
Confidence            556777777  99999999999999997532   2689999532211     0 000111 11111112    3799999


Q ss_pred             hhcccCCC----CCCC-CCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCC
Q psy16343        315 IVNAFMGP----EASG-YDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE  388 (539)
Q Consensus       315 vl~~~~~~----~~~~-y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~  388 (539)
                      -+....|.    ...+ -..+.||+|+||+++||++ |+|||.-...  +.+..+.  ....+.+++.|.          
T Consensus       198 RFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL--~aYr~~~--~~~~e~~Le~Ie----------  263 (1431)
T KOG1240|consen  198 RFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL--LAYRSGN--ADDPEQLLEKIE----------  263 (1431)
T ss_pred             hhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHH--HhHhccC--ccCHHHHHHhCc----------
Confidence            88642111    1111 3457999999999999976 7999952100  0000110  011222222221          


Q ss_pred             CCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        389 WSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       389 ~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          +...+.||..|++.||++|++|++.|+.
T Consensus       264 ----d~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  264 ----DVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ----CccHHHHHHHHHccCchhccCHHHHHHh
Confidence                3467999999999999999999999975

>PRK10345 hypothetical protein; Provisional

Probab=99.61  E-value=1.3e-15  Score=145.13  Aligned_cols=63  Identities=16%  Similarity=0.188  Sum_probs=50.9

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc----CCCCeeeeeeeeccc
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ----GHPNIIQLLEYYEDD  118 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~----~HpnIv~l~~~~~~~  118 (539)
                      .+.||+|+||.||.  +..++.. +||++..........+.+|+.++..+.    +||||++++++++++
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~   73 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD   73 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC
Confidence            46899999999995  7777765 699986543344567899999999874    489999999999775

>KOG0192|consensus

Probab=99.60  E-value=6.1e-16  Score=158.72  Aligned_cols=92  Identities=32%  Similarity=0.523  Sum_probs=72.4

Q ss_pred             ccccCC-eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~-IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|.+. |||||||++|||+....  .++||+|||+++.......        ......||+.|||||++...    ...
T Consensus       157 YLH~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~~~~~--------~~~~~~GT~~wMAPEv~~~~----~~~  222 (362)
T KOG0192|consen  157 YLHSEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKVISKT--------SMTSVAGTYRWMAPEVLRGE----KSP  222 (362)
T ss_pred             HHhcCCCeeecccChhhEEEcCCC--CEEEECCCccceeeccccc--------cccCCCCCccccChhhhcCC----CCc
Confidence            557778 99999999999994332  4899999999865432210        11125799999999998632    467


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |+.++||||||+++|||+||..||.+.
T Consensus       223 ~~~K~DvySFgIvlWEl~t~~~Pf~~~  249 (362)
T KOG0192|consen  223 YTEKSDVYSFGIVLWELLTGEIPFEDL  249 (362)
T ss_pred             CCccchhhhHHHHHHHHHHCCCCCCCC
Confidence            999999999999999999999999763

>KOG0983|consensus

Probab=99.60  E-value=7.8e-16  Score=145.56  Aligned_cols=86  Identities=40%  Similarity=0.808  Sum_probs=68.8

Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      +|||||+||.|||+   +..+.+|+||||++..+ .+...++        ...|.+.|||||-+..   .....|+-++|
T Consensus       212 ~viHRDvKPSNILl---De~GniKlCDFGIsGrl-vdSkAht--------rsAGC~~YMaPERidp---~~~~kYDiRaD  276 (391)
T KOG0983|consen  212 GVIHRDVKPSNILL---DERGNIKLCDFGISGRL-VDSKAHT--------RSAGCAAYMAPERIDP---PDKPKYDIRAD  276 (391)
T ss_pred             ceeecccCccceEE---ccCCCEEeeccccccee-ecccccc--------cccCCccccCccccCC---CCCCccchhhh
Confidence            89999999999999   66677999999987332 2222222        2368999999997742   22467999999


Q ss_pred             hhhhhHHHHHHHhCCCCCCCC
Q psy16343        206 LWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~  226 (539)
                      |||||+.++||.||..||.+.
T Consensus       277 VWSlGITlveLaTg~yPy~~c  297 (391)
T KOG0983|consen  277 VWSLGITLVELATGQYPYKGC  297 (391)
T ss_pred             hhhhccchhhhhcccCCCCCC
Confidence            999999999999999999874

>KOG4721|consensus

Probab=99.60  E-value=2.7e-16  Score=161.37  Aligned_cols=92  Identities=32%  Similarity=0.505  Sum_probs=73.2

Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      -++.|...|||||||.-|||+..   ...|||+|||-.+..... +        ....++||..|||||++++      .
T Consensus       225 M~YLH~hKIIHRDLKSPNiLIs~---~d~VKIsDFGTS~e~~~~-S--------TkMSFaGTVaWMAPEvIrn------e  286 (904)
T KOG4721|consen  225 MNYLHLHKIIHRDLKSPNILISY---DDVVKISDFGTSKELSDK-S--------TKMSFAGTVAWMAPEVIRN------E  286 (904)
T ss_pred             hHHHHHhhHhhhccCCCceEeec---cceEEeccccchHhhhhh-h--------hhhhhhhhHhhhCHHHhhc------C
Confidence            34667778999999999999954   446999999976443221 1        1235789999999999975      5


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCG  228 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~  228 (539)
                      ..++|+|||||||||||||||..||.....
T Consensus       287 PcsEKVDIwSfGVVLWEmLT~EiPYkdVds  316 (904)
T KOG4721|consen  287 PCSEKVDIWSFGVVLWEMLTGEIPYKDVDS  316 (904)
T ss_pred             CcccccceehhHHHHHHHHhcCCCccccch
Confidence            678999999999999999999999976433

>KOG0610|consensus

Probab=99.59  E-value=2e-15  Score=150.45  Aligned_cols=121  Identities=30%  Similarity=0.495  Sum_probs=88.2

Q ss_pred             HHHhhcCCCCeeeeeeeeccccc-----------------------------ccccCCeeeecCCCCCeeccCCCCCCCe
Q psy16343         98 TFHHCQGHPNIIQLLEYYEDDEN-----------------------------HERHKRIAHRDLKPENILCVHPDQLSPV  148 (539)
Q Consensus        98 ~l~~~~~HpnIv~l~~~~~~~~~-----------------------------~~~~~~IiHrDLK~enill~~~~~~~~i  148 (539)
                      ++.++..-..+.-++|||..++.                             +.|-++||.|||||||||+   ...++|
T Consensus       142 LYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHI  218 (459)
T KOG0610|consen  142 LYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHI  218 (459)
T ss_pred             hhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcE
Confidence            33444445677788999988763                             3466799999999999999   667889


Q ss_pred             EEEeccccccCcCCC------C----------------------C-CCCC----------CCC---------CccCCCCC
Q psy16343        149 KLCDFDLGSGIKFNT------S----------------------V-HSPL----------ATP---------LLLTPVGS  180 (539)
Q Consensus       149 kl~Dfgl~~~~~~~~------~----------------------~-~~~~----------~~~---------~l~~~~gt  180 (539)
                      -|+||+|........      .                      . ....          ..+         ..-..+||
T Consensus       219 MLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGT  298 (459)
T KOG0610|consen  219 MLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGT  298 (459)
T ss_pred             EeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccc
Confidence            999999864321100      0                      0 0000          000         11246899


Q ss_pred             CCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      -+|+|||++.      +.+++.++|||+||+++||||+|..||.|..
T Consensus       299 hEYlAPEvI~------G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~  339 (459)
T KOG0610|consen  299 HEYLAPEVIR------GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSN  339 (459)
T ss_pred             cccccceeee------cCCCCchhhHHHHHHHHHHHHhCCCCcCCCC
Confidence            9999999996      4788999999999999999999999999863

>KOG0585|consensus

Probab=99.58  E-value=6.8e-16  Score=155.89  Aligned_cols=98  Identities=32%  Similarity=0.507  Sum_probs=73.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||.|+|+   +..+++||+|||.+.......   ......++...+|||.|+|||.+..-.  .....
T Consensus       225 YLH~QgiiHRDIKPsNLLl---~~~g~VKIsDFGVs~~~~~~~---~~~~d~~L~~tvGTPAF~APE~c~~~~--~~~~~  296 (576)
T KOG0585|consen  225 YLHYQGIIHRDIKPSNLLL---SSDGTVKISDFGVSNEFPQGS---DEGSDDQLSRTVGTPAFFAPELCSGGN--SFSYS  296 (576)
T ss_pred             HHHhcCeeccccchhheEE---cCCCcEEeeccceeeecccCC---ccccHHHHhhcCCCccccchHhhcCCC--Ccccc
Confidence            5588999999999999999   455789999999864321111   011112455578999999999875311  12345


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.+.||||+||.||.|+.|+.||.++
T Consensus       297 g~a~DiWalGVTLYCllfG~~PF~~~  322 (576)
T KOG0585|consen  297 GFALDIWALGVTLYCLLFGQLPFFDD  322 (576)
T ss_pred             chhhhhhhhhhhHHHhhhccCCcccc
Confidence            67899999999999999999999875

>KOG0611|consensus

Probab=99.58  E-value=1.4e-15  Score=150.43  Aligned_cols=112  Identities=37%  Similarity=0.553  Sum_probs=87.4

Q ss_pred             HHHhhcCCCCeeeeeeeeccccc---------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEE
Q psy16343         98 TFHHCQGHPNIIQLLEYYEDDEN---------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKL  150 (539)
Q Consensus        98 ~l~~~~~HpnIv~l~~~~~~~~~---------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl  150 (539)
                      |...+.+..-||-+++|-..++.                           +.|.++|+|||||.||||+   +.+..+||
T Consensus       118 IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKI  194 (668)
T KOG0611|consen  118 IYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKI  194 (668)
T ss_pred             hhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeee
Confidence            33344566778888887655542                           3466799999999999999   66677999


Q ss_pred             EeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        151 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       151 ~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +|||+...+...+         .+.++||++-|.+||++++-     ..-++.+|.||+||+||.|+.|..||.|.
T Consensus       195 ADFGLSNly~~~k---------fLqTFCGSPLYASPEIvNG~-----PY~GPEVDsWsLGvLLYtLVyGtMPFDG~  256 (668)
T KOG0611|consen  195 ADFGLSNLYADKK---------FLQTFCGSPLYASPEIVNGT-----PYKGPEVDSWSLGVLLYTLVYGTMPFDGR  256 (668)
T ss_pred             eccchhhhhcccc---------HHHHhcCCcccCCccccCCC-----CCCCCccchhhHHHHHHHHhhcccccCCc
Confidence            9999975543322         56789999999999999752     22346799999999999999999999875

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.57  E-value=2.7e-15  Score=140.81  Aligned_cols=105  Identities=18%  Similarity=0.134  Sum_probs=68.9

Q ss_pred             chhhhHHHhhhhhCCCCCCC-CCCceeecCCCCCCCceeccCCCccccccCCCC----C-CCCCCCCccccccCcccccc
Q psy16343        240 HACQEILFHSIQQGIAHRDL-KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV----H-SPLATPLLLTPVGSAEFMAP  313 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDl-KpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~----~-~~~~~~~~~t~~GT~~Y~AP  313 (539)
                      +..++.++|  ++||+|||| ||+|||+.   ..+.++|+|||+|.........    . .....-...-..+++.|++|
T Consensus       100 i~~~L~~lH--~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~  174 (218)
T PRK12274        100 ARRLLQQLH--RCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTP  174 (218)
T ss_pred             HHHHHHHHH--HCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCH
Confidence            455667777  999999999 79999995   3456999999999743321110    0 00000000112378899999


Q ss_pred             hhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        314 EIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNC  354 (539)
Q Consensus       314 Evl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~  354 (539)
                      +--.-.     ...+ .+.+|.+.|+-+|.++|+..|+.+++
T Consensus       175 ~~~~~l-----~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        175 VERRVL-----KRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHhhh-----ccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            854321     1123 34567799999999999999988764

>KOG0032|consensus

Probab=99.55  E-value=3.3e-15  Score=154.53  Aligned_cols=92  Identities=43%  Similarity=0.772  Sum_probs=76.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC-CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ-LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~-~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||||+++..... ...+|++|||++.......         .+.+.+||+.|+|||++..      ..
T Consensus       150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~---------~~~~~~Gtp~y~APEvl~~------~~  214 (382)
T KOG0032|consen  150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE---------RLHTIVGTPEYVAPEVLGG------RP  214 (382)
T ss_pred             HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc---------eEeeecCCccccCchhhcC------CC
Confidence            457789999999999999987654 4589999999985433211         3457799999999999863      57


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      |+..+|+||+||++|.||+|.+||.+.+
T Consensus       215 y~~~~DiWS~Gvi~yiLL~G~~PF~~~~  242 (382)
T KOG0032|consen  215 YGDEVDVWSIGVILYILLSGVPPFWGET  242 (382)
T ss_pred             CCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence            9999999999999999999999998753

>KOG1151|consensus

Probab=99.54  E-value=7.4e-15  Score=146.84  Aligned_cols=99  Identities=33%  Similarity=0.514  Sum_probs=79.4

Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      ..|||-||||.|||+.+...++.+||.|||+.+.+. +.+..+..+........||.+|++||.+..  ..+...++.++
T Consensus       589 pPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMd-ddSy~~vdGmeLTSQgAGTYWYLPPEcFvV--gkePPKIsnKV  665 (775)
T KOG1151|consen  589 PPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMD-DDSYNSVDGMELTSQGAGTYWYLPPECFVV--GKEPPKISNKV  665 (775)
T ss_pred             CCeeeeccCCccEEEecCcccceeEeeecchhhhcc-CCccCcccceeeecccCceeeecCcceeec--CCCCCccccce
Confidence            479999999999999999999999999999985444 333333333334445689999999998753  33456789999


Q ss_pred             chhhhhHHHHHHHhCCCCCCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||||+|||+|+.|+|+.||..+
T Consensus       666 DVWSvGVIFyQClYGrKPFGhn  687 (775)
T KOG1151|consen  666 DVWSVGVIFYQCLYGRKPFGHN  687 (775)
T ss_pred             eeEeeehhhhhhhccCCCCCCc
Confidence            9999999999999999999764

>KOG0198|consensus

Probab=99.54  E-value=1.7e-15  Score=151.28  Aligned_cols=93  Identities=33%  Similarity=0.532  Sum_probs=69.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+...  .+.+||+|||++..........     .......||+.|||||++..     ....
T Consensus       132 ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~~~~~~-----~~~~~~~Gtp~~maPEvi~~-----g~~~  199 (313)
T KOG0198|consen  132 YLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLESKGTKS-----DSELSVQGTPNYMAPEVIRN-----GEVA  199 (313)
T ss_pred             HHHhCCEeccCcccceEEEeCC--CCeEEeccCccccccccccccc-----cccccccCCccccCchhhcC-----CCcC
Confidence            4578899999999999999542  4679999999875443200000     02234679999999999863     1112


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ...+||||+||++.||+||++||..
T Consensus       200 ~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  200 RRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             CccchhhhcCCEEEeccCCCCcchh
Confidence            2489999999999999999999965

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.54  E-value=5.6e-15  Score=153.50  Aligned_cols=97  Identities=40%  Similarity=0.771  Sum_probs=71.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCC----------C-----------------CCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH----------S-----------------PLATPL  173 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~----------~-----------------~~~~~~  173 (539)
                      +.|.++|+||||||+||++.   ..+.+||+|||+++.+.......          .                 ......
T Consensus       116 ~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (363)
T cd05628         116 SIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQL  192 (363)
T ss_pred             HHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccc
Confidence            45667999999999999994   45679999999976432211000          0                 000001


Q ss_pred             ccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        174 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       174 l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ....+||+.|+|||++.      ...++.++|+|||||++|+|++|..||.+.
T Consensus       193 ~~~~~Gt~~Y~aPE~~~------~~~~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         193 AFSTVGTPDYIAPEVFM------QTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             cccccCCccccCHHHHc------CCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence            13457999999999875      256888999999999999999999999764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG4236|consensus

Probab=99.54  E-value=6.6e-16  Score=157.17  Aligned_cols=91  Identities=37%  Similarity=0.727  Sum_probs=77.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+|+||||||+|+...+....+||||||+++.+....         .-.+.+|||.|+|||++.+      .+|
T Consensus       679 ~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---------FRrsVVGTPAYLaPEVLrn------kGy  743 (888)
T KOG4236|consen  679 YLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---------FRRSVVGTPAYLAPEVLRN------KGY  743 (888)
T ss_pred             HhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---------hhhhhcCCccccCHHHHhh------ccc
Confidence            5577799999999999999988888899999999997653221         1235789999999999964      789


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +++-|+||+|||+|.-|.|..||..+
T Consensus       744 NrSLDMWSVGVIiYVsLSGTFPFNEd  769 (888)
T KOG4236|consen  744 NRSLDMWSVGVIIYVSLSGTFPFNED  769 (888)
T ss_pred             cccccceeeeEEEEEEecccccCCCc
Confidence            99999999999999999999999764

>KOG4250|consensus

Probab=99.53  E-value=5.4e-15  Score=156.17  Aligned_cols=91  Identities=37%  Similarity=0.601  Sum_probs=74.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCC-CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~-~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++.... +...-||+|||.++.+..+.         .+...+||..|.+||+...     ...
T Consensus       135 ~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---------~~~S~vGT~~YLhPel~E~-----q~~  200 (732)
T KOG4250|consen  135 HLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---------LFTSLVGTEEYLHPELYER-----QKK  200 (732)
T ss_pred             HHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---------eeeeecCchhhcChHHHhh-----ccC
Confidence            45667999999999999987654 44557999999998876554         3345789999999998842     367


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      |+..+|.|||||++|+..||..||-.
T Consensus       201 y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  201 YTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             cCceeehhhhhhHHHHHhccCCCCCc
Confidence            89999999999999999999999953

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.52  E-value=9.4e-15  Score=148.57  Aligned_cols=96  Identities=28%  Similarity=0.369  Sum_probs=72.0

Q ss_pred             ccccCCeeeecCCCCCeeccCC-CCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHP-DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~-~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++... +..+.+||+|||+++.........     ......+||+.|+|||++..     ...
T Consensus       123 ~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~-----~~~  192 (317)
T cd07868         123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-----ADLDPVVVTFWYRAPELLLG-----ARH  192 (317)
T ss_pred             HHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccc-----cccCCccccccccCCHHHcC-----CCC
Confidence            4567799999999999999643 345679999999985432211110     01224578999999998753     235


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++|+||+||++|+|++|++||.+.
T Consensus       193 ~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         193 YTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            788999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.52  E-value=8.6e-15  Score=140.15  Aligned_cols=68  Identities=7%  Similarity=-0.006  Sum_probs=48.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHH---H------HHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---R------VFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~---~------~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      ..|+. .++||.|+||.||++..  ++..+|||++.........   .      +.+|+..+.++ .||+|..+.+++..
T Consensus        31 ~~y~~-~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~~  106 (232)
T PRK10359         31 YNIKT-IKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYLL  106 (232)
T ss_pred             CceEE-EEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeeee
Confidence            34554 47899999999998543  4668999999532221111   1      46888889998 59999999888765


Q ss_pred             c
Q psy16343        118 D  118 (539)
Q Consensus       118 ~  118 (539)
                      .
T Consensus       107 ~  107 (232)
T PRK10359        107 A  107 (232)
T ss_pred             c
Confidence            3

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.52  E-value=1.1e-14  Score=137.09  Aligned_cols=41  Identities=15%  Similarity=0.105  Sum_probs=33.1

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++.++.++| |+.||+||||||+|||+..    +.++|+|||+|..
T Consensus       126 i~~~L~~l~-H~~giiHrDlkP~NIli~~----~~v~LiDFG~a~~  166 (190)
T cd05147         126 VIQIMRILY-QDCRLVHADLSEYNLLYHD----GKLYIIDVSQSVE  166 (190)
T ss_pred             HHHHHHHHH-HhCCcccCCCCHHHEEEEC----CcEEEEEcccccc
Confidence            556677762 3889999999999999952    4599999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.52  E-value=7e-15  Score=150.25  Aligned_cols=88  Identities=34%  Similarity=0.638  Sum_probs=69.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.......        .....+|++.|+|||++.      ...+
T Consensus       110 ~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~------~~~~  172 (323)
T cd05571         110 YLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGA--------TMKTFCGTPEYLAPEVLE------DNDY  172 (323)
T ss_pred             HHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCC--------cccceecCccccChhhhc------CCCC
Confidence            4566799999999999999   4456799999998753211110        122457999999999875      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       173 ~~~~DiwSlG~il~elltg~~Pf~~  197 (323)
T cd05571         173 GRAVDWWGLGVVMYEMMCGRLPFYN  197 (323)
T ss_pred             CccccCcccchhhhhhhcCCCCCCC
Confidence            8999999999999999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.52  E-value=9.3e-15  Score=149.29  Aligned_cols=89  Identities=33%  Similarity=0.602  Sum_probs=69.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+|++.|+|||++..      ..+
T Consensus       116 ~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  178 (323)
T cd05616         116 FLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGV--------TTKTFCGTPDYIAPEIIAY------QPY  178 (323)
T ss_pred             HHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCC--------ccccCCCChhhcCHHHhcC------CCC
Confidence            4466699999999999999   4556799999998753221111        1224578999999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       179 ~~~~DiwSlGvil~elltg~~Pf~~~  204 (323)
T cd05616         179 GKSVDWWAFGVLLYEMLAGQAPFEGE  204 (323)
T ss_pred             CCccchhchhHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.51  E-value=1.2e-14  Score=146.54  Aligned_cols=169  Identities=17%  Similarity=0.134  Sum_probs=112.9

Q ss_pred             cchhcccCceeceeCceEEEEEEEccC---CcEEEEEEeccCCCCCHH-----------HHHHHHHHHHhhcCCCCeeee
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILT---ELEYAVKIIDKLPGHSRS-----------RVFKEVETFHHCQGHPNIIQL  111 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~~~~~~-----------~~~~Ei~~l~~~~~HpnIv~l  111 (539)
                      ...|++ .++||+|+||.||+|....+   +..+|+|+..........           ....+...+.. .+|+||+++
T Consensus        11 ~~~y~i-~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~h~~i~~~   88 (294)
T PHA02882         11 GKEWKI-DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHN-IDHLGIPKY   88 (294)
T ss_pred             CCceEE-eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhcc-CCCCCCCcE
Confidence            345665 57899999999999998777   667788865322211100           01112222333 369999988


Q ss_pred             eeeecccc-------------------------------------------cccccCCeeeecCCCCCeeccCCCCCCCe
Q psy16343        112 LEYYEDDE-------------------------------------------NHERHKRIAHRDLKPENILCVHPDQLSPV  148 (539)
Q Consensus       112 ~~~~~~~~-------------------------------------------~~~~~~~IiHrDLK~enill~~~~~~~~i  148 (539)
                      ++......                                           .+.|..+|+||||||+||++.   ....+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~~~~~  165 (294)
T PHA02882         89 YGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---GNNRG  165 (294)
T ss_pred             EEeeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCcE
Confidence            75421110                                           134677899999999999994   44669


Q ss_pred             EEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        149 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       149 kl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +|+|||+++............. .......||+.|+|||+..      ...++.++||||+||++|+|++|..||.+.
T Consensus       166 ~l~DFGla~~~~~~~~~~~~~~-~~~~~~~gt~~y~ape~~~------~~~~~~~~DiwSlG~~l~el~~g~~P~~~~  236 (294)
T PHA02882        166 YIIDYGIASHFIIHGKHIEYSK-EQKDLHRGTLYYAGLDAHN------GACVTRRGDLESLGYCMLKWAGIKLPWKGF  236 (294)
T ss_pred             EEEEcCCceeeccCCccccccc-ccccccCCCccccCHHHhC------CCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            9999999865432221110000 0111236899999999875      355789999999999999999999999764

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.51  E-value=1.2e-14  Score=151.53  Aligned_cols=94  Identities=32%  Similarity=0.604  Sum_probs=71.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.+||+|||++.........       ...+.+||+.|+|||++....  ....+
T Consensus       157 ~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~~~~~~~~~-------~~~~~~gt~~y~aPE~l~~~~--~~~~~  224 (371)
T cd05622         157 AIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCMKMNKEGMV-------RCDTAVGTPDYISPEVLKSQG--GDGYY  224 (371)
T ss_pred             HHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCceeEcCcCCcc-------cccCcccCccccCHHHHhccC--CCccC
Confidence            45778999999999999994   4567999999997543221110       112457999999999875311  12347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       225 ~~~~DiwSlGvilyell~G~~Pf~~~  250 (371)
T cd05622         225 GRECDWWSVGVFLYEMLVGDTPFYAD  250 (371)
T ss_pred             CCccceeehhHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG4717|consensus

Probab=99.51  E-value=8.5e-15  Score=148.85  Aligned_cols=89  Identities=42%  Similarity=0.780  Sum_probs=72.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|+..||||||||||+++.  ...+-+||.||||...+.+..         .+.+.||+..|-|||++.+      ..|
T Consensus       133 YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~PG~---------kL~TsCGSLAYSAPEILLG------DsY  195 (864)
T KOG4717|consen  133 YCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQPGK---------KLTTSCGSLAYSAPEILLG------DSY  195 (864)
T ss_pred             HHhhhhhhcccCCcceeEEe--eecCceEeeeccccccCCCcc---------hhhcccchhhccCchhhhc------Ccc
Confidence            34556799999999999886  445679999999986554433         4557899999999999864      334


Q ss_pred             C-cccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 D-KRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~-~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      + +++||||+|||||.|++|++||+..
T Consensus       196 DAPAVDiWSLGVILyMLVCGq~PFqeA  222 (864)
T KOG4717|consen  196 DAPAVDIWSLGVILYMLVCGQPPFQEA  222 (864)
T ss_pred             CCcchhhhHHHHHHHHHHhCCCccccc
Confidence            4 6799999999999999999999854

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.51  E-value=1.1e-14  Score=151.87  Aligned_cols=94  Identities=32%  Similarity=0.624  Sum_probs=71.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.........       ...+.+||+.|+|||++....  ....+
T Consensus       157 ~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~~~~-------~~~~~~gt~~Y~aPE~~~~~~--~~~~~  224 (370)
T cd05621         157 AIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMV-------RCDTAVGTPDYISPEVLKSQG--GDGYY  224 (370)
T ss_pred             HHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccCCce-------ecccCCCCcccCCHHHHhccC--CCCCC
Confidence            4577899999999999999   45567999999998543221110       112457999999999885311  11347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       225 ~~~~DiwSlG~ilyell~G~~Pf~~~  250 (370)
T cd05621         225 GRECDWWSVGVFLFEMLVGDTPFYAD  250 (370)
T ss_pred             CcccCEEeehHHHHHHHhCCCCCCCC
Confidence            78999999999999999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.51  E-value=1.2e-14  Score=155.01  Aligned_cols=90  Identities=36%  Similarity=0.611  Sum_probs=70.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..  ....+||+|||+++.+....         .....+|++.|+|||++..     ...+
T Consensus       185 yLH~~~IiHrDLKp~NILl~~--~~~~vkL~DFGla~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~  248 (440)
T PTZ00036        185 YIHSKFICHRDLKPQNLLIDP--NTHTLKLCDFGSAKNLLAGQ---------RSVSYICSRFYRAPELMLG-----ATNY  248 (440)
T ss_pred             HHHHCCEecCCcCHHHEEEcC--CCCceeeeccccchhccCCC---------CcccCCCCcCccCHHHhcC-----CCCC
Confidence            457789999999999999943  22469999999986432211         1224578999999998742     2458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|.+||.+.
T Consensus       249 ~~~~DiwSlGvil~elltG~~pf~~~  274 (440)
T PTZ00036        249 TTHIDLWSLGCIIAEMILGYPIFSGQ  274 (440)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999875

>KOG0984|consensus

Probab=99.50  E-value=8.7e-15  Score=133.42  Aligned_cols=86  Identities=34%  Similarity=0.616  Sum_probs=67.6

Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccC-CCCCCCcccccccccccCCCCCCCCccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT-PVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~-~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      .|||||+||.|||+   +..+.+|+||||++ ++-.+.-.         .+ -.|...|||||.+..  +....+|+-++
T Consensus       169 ~vIHRDvKPsNiLI---n~~GqVKiCDFGIs-G~L~dSiA---------kt~daGCkpYmaPEri~~--e~n~~gY~vks  233 (282)
T KOG0984|consen  169 SVIHRDVKPSNILI---NYDGQVKICDFGIS-GYLVDSIA---------KTMDAGCKPYMAPERINP--ELNQKGYSVKS  233 (282)
T ss_pred             hhhhccCCcceEEE---ccCCcEEEcccccc-eeehhhhH---------HHHhcCCCccCChhhcCc--ccCcccceeeh
Confidence            69999999999999   66678999999987 32221110         11 357889999998863  22345899999


Q ss_pred             chhhhhHHHHHHHhCCCCCCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||||+|+.+.||.+++.||..+
T Consensus       234 DvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  234 DVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hhhhhhhhhhhhhhcccccccc
Confidence            9999999999999999999763

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.50  E-value=1.5e-14  Score=148.00  Aligned_cols=89  Identities=38%  Similarity=0.636  Sum_probs=69.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....+|++.|+|||++..      ..+
T Consensus       111 ~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  173 (325)
T cd05602         111 YLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCKENIEHNG--------TTSTFCGTPEYLAPEVLHK------QPY  173 (325)
T ss_pred             HHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCCcccccCCC--------CcccccCCccccCHHHHcC------CCC
Confidence            44666999999999999994   456799999998753221111        1224579999999998753      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       174 ~~~~DiwslG~il~el~~g~~pf~~~  199 (325)
T cd05602         174 DRTVDWWCLGAVLYEMLYGLPPFYSR  199 (325)
T ss_pred             CCccccccccHHHHHHhcCCCCCCCC
Confidence            88999999999999999999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.50  E-value=1.9e-14  Score=144.21  Aligned_cols=88  Identities=35%  Similarity=0.629  Sum_probs=69.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++.......         .....+|+..|+|||++..      ..+
T Consensus       117 ~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~------~~~  178 (285)
T cd05631         117 DLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGE---------TVRGRVGTVGYMAPEVINN------EKY  178 (285)
T ss_pred             HHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCC---------eecCCCCCCCccCHhhhcC------CCC
Confidence            4566799999999999999   445679999999875432111         1123468999999998853      467


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       179 ~~~~DvwslGvil~el~~g~~pf~~~  204 (285)
T cd05631         179 TFSPDWWGLGCLIYEMIQGQSPFRKR  204 (285)
T ss_pred             CcccCchhHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.50  E-value=1.8e-14  Score=150.70  Aligned_cols=97  Identities=36%  Similarity=0.736  Sum_probs=69.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCC----------------------------------
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH----------------------------------  166 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~----------------------------------  166 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||++..........                                  
T Consensus       116 ~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (382)
T cd05625         116 SVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPL  192 (382)
T ss_pred             HHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccch
Confidence            4466799999999999999   455679999999875322100000                                  


Q ss_pred             ----CC-CCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        167 ----SP-LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       167 ----~~-~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                          .. .......+.+||+.|+|||++.      ...++.++||||+||++|+|++|.+||.+.
T Consensus       193 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~~DiwSlGvil~elltG~~Pf~~~  251 (382)
T cd05625         193 ERRAARQHQRCLAHSLVGTPNYIAPEVLL------RTGYTQLCDWWSVGVILYEMLVGQPPFLAQ  251 (382)
T ss_pred             hhhhccccccccccccccCcccCCHHHhc------CCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence                00 0000012347999999999885      356889999999999999999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.50  E-value=1.9e-14  Score=150.64  Aligned_cols=97  Identities=34%  Similarity=0.673  Sum_probs=69.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCC---------------------------------
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS---------------------------------  167 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~---------------------------------  167 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........                                 
T Consensus       116 ~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (381)
T cd05626         116 SVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTL  192 (381)
T ss_pred             HHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchh
Confidence            44667999999999999994   456799999998753321100000                                 


Q ss_pred             -----CC-CCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        168 -----PL-ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       168 -----~~-~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                           .. ......+.+||+.|+|||++..      ..++.++||||+||++|+|++|..||.+.
T Consensus       193 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~~~DiwSlG~il~elltG~~Pf~~~  251 (381)
T cd05626         193 EQRATKQHQRCLAHSLVGTPNYIAPEVLLR------KGYTQLCDWWSVGVILFEMLVGQPPFLAP  251 (381)
T ss_pred             hccccccccccccccccCCccccCHHHHcC------CCCCCccceeehhhHHHHHHhCCCCCcCC
Confidence                 00 0000123579999999998752      45788999999999999999999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PTZ00284 protein kinase; Provisional

Probab=99.50  E-value=1.5e-14  Score=155.51  Aligned_cols=89  Identities=28%  Similarity=0.472  Sum_probs=68.7

Q ss_pred             cccc-CCeeeecCCCCCeeccCCCC-------------CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccc
Q psy16343        121 HERH-KRIAHRDLKPENILCVHPDQ-------------LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP  186 (539)
Q Consensus       121 ~~~~-~~IiHrDLK~enill~~~~~-------------~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aP  186 (539)
                      +.|. .+||||||||+|||+...+.             ...+||+|||++.....           .....+||+.|+||
T Consensus       246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----------~~~~~~gt~~Y~AP  314 (467)
T PTZ00284        246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----------SRTAIVSTRHYRSP  314 (467)
T ss_pred             HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-----------ccccccCCccccCc
Confidence            3465 48999999999999965432             12599999997632111           11245789999999


Q ss_pred             cccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       187 E~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |++..      ..++.++|||||||++|+|++|++||.+.
T Consensus       315 E~~~~------~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        315 EVVLG------LGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             HHhhc------CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99853      46889999999999999999999999764

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.50  E-value=3.8e-14  Score=133.57  Aligned_cols=41  Identities=24%  Similarity=0.178  Sum_probs=34.2

Q ss_pred             chhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        240 HACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       240 ~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ++.++.++|  + +||+||||||+|||+.    .+.++|+|||+++..
T Consensus       126 l~~~l~~lH--~~~givHrDlkP~NIll~----~~~~~liDFG~a~~~  167 (190)
T cd05145         126 VVEQMRRLY--QEAGLVHGDLSEYNILYH----DGKPYIIDVSQAVEL  167 (190)
T ss_pred             HHHHHHHHH--HhCCEecCCCChhhEEEE----CCCEEEEEcccceec
Confidence            556677777  7 9999999999999995    356999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1006|consensus

Probab=99.50  E-value=2.6e-15  Score=141.55  Aligned_cols=85  Identities=39%  Similarity=0.707  Sum_probs=67.4

Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|||||+||.|||+   +..+.+||||||++..+.... .        -..-.|...|||||-+..    ...+|+-++|
T Consensus       188 kiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~Si-A--------kT~daGCrpYmAPERi~p----~~~gyDiRSD  251 (361)
T KOG1006|consen  188 KIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVDSI-A--------KTVDAGCRPYMAPERIDP----SDKGYDIRSD  251 (361)
T ss_pred             hhhhccCChhheEE---ecCCCEeeecccchHhHHHHH-H--------hhhccCCccccChhccCC----ccCCcchhhh
Confidence            69999999999999   556679999999873322110 0        012368899999998753    3458999999


Q ss_pred             hhhhhHHHHHHHhCCCCCCCC
Q psy16343        206 LWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~  226 (539)
                      |||+|+.+||+.||..|+.++
T Consensus       252 vWSLGITL~EvAtG~fPyr~w  272 (361)
T KOG1006|consen  252 VWSLGITLYEVATGNFPYRKW  272 (361)
T ss_pred             hhhhcceEeeeecCCCCcchH
Confidence            999999999999999999883

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.50  E-value=1.9e-14  Score=147.48  Aligned_cols=88  Identities=34%  Similarity=0.639  Sum_probs=69.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....+|++.|+|||++..      ..+
T Consensus       110 ~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  172 (328)
T cd05593         110 YLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAA--------TMKTFCGTPEYLAPEVLED------NDY  172 (328)
T ss_pred             HHHhCCeEecccCHHHeEEC---CCCcEEEecCcCCccCCCccc--------ccccccCCcCccChhhhcC------CCC
Confidence            44667999999999999994   456799999998753211110        1224579999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       173 ~~~~DiwslGvil~elltG~~Pf~~  197 (328)
T cd05593         173 GRAVDWWGLGVVMYEMMCGRLPFYN  197 (328)
T ss_pred             CccCCccccchHHHHHhhCCCCCCC
Confidence            8899999999999999999999965

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0193|consensus

Probab=99.49  E-value=1.2e-14  Score=150.93  Aligned_cols=93  Identities=33%  Similarity=0.465  Sum_probs=73.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|||||||..||++.   +...|||+|||++.....- .     ....+....|...|||||++.-   .+...|
T Consensus       503 YLHAK~IIHrDLKSnNIFl~---~~~kVkIgDFGLatvk~~w-~-----g~~q~~qp~gsilwmAPEvIRm---qd~nPf  570 (678)
T KOG0193|consen  503 YLHAKNIIHRDLKSNNIFLH---EDLKVKIGDFGLATVKTRW-S-----GEQQLEQPHGSLLWMAPEVIRM---QDDNPF  570 (678)
T ss_pred             hhhhhhhhhhhccccceEEc---cCCcEEEecccceeeeeee-c-----cccccCCCccchhhhcHHHHhh---cccCCC
Confidence            56778999999999999994   4467999999997432111 0     1114456678899999999872   345779


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +..+||||||||+|||++|..||..
T Consensus       571 S~qSDVYaFGiV~YELltg~lPysi  595 (678)
T KOG0193|consen  571 SFQSDVYAFGIVWYELLTGELPYSI  595 (678)
T ss_pred             CcccchhhhhHHHHHHHhCcCCcCC
Confidence            9999999999999999999999974

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.49  E-value=1.9e-14  Score=147.06  Aligned_cols=89  Identities=34%  Similarity=0.606  Sum_probs=69.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.+||+|||++........        .....+|++.|+|||++..      ..+
T Consensus       116 ~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  178 (324)
T cd05587         116 FLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGMCKENIFGGK--------TTRTFCGTPDYIAPEIIAY------QPY  178 (324)
T ss_pred             HHHHCCeEecCCCHHHeEEc---CCCCEEEeecCcceecCCCCC--------ceeeecCCccccChhhhcC------CCC
Confidence            44667999999999999994   456799999998743211111        1224578999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|+.||.+.
T Consensus       179 ~~~~DiwslGvil~elltG~~pf~~~  204 (324)
T cd05587         179 GKSVDWWAFGVLLYEMLAGQPPFDGE  204 (324)
T ss_pred             CcccchhhhHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0590|consensus

Probab=99.49  E-value=7e-15  Score=160.48  Aligned_cols=163  Identities=27%  Similarity=0.450  Sum_probs=123.8

Q ss_pred             CccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc-CCCCCCCCCCCCcccccc-Ccc
Q psy16343        232 GWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF-NTSVHSPLATPLLLTPVG-SAE  309 (539)
Q Consensus       232 ~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~-~~~~~~~~~~~~~~t~~G-T~~  309 (539)
                      .+.+|   +..++.|+|. ..|+.||||||+|.++...+.  .+|++|||+|+.... +..      ...+...|| |+.
T Consensus       127 ~~~~q---l~s~l~~~H~-~~~~~h~~ikP~n~~l~~s~~--~l~~~df~~At~~~~~~g~------~~~~~~~~g~s~~  194 (601)
T KOG0590|consen  127 RYLPQ---LNSGLSYLHP-ENGVTHRDIKPSNSLLDESGS--ALKIADFGLATAYRNKNGA------ERSLKDRCGSSPP  194 (601)
T ss_pred             hhhhh---hccCccccCc-ccccccCCCCCccchhccCCC--cccCCCchhhccccccCCc------ceeeecccCCCCC
Confidence            36666   7778888886 689999999999999954432  689999999987655 222      224567799 999


Q ss_pred             cccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCC
Q psy16343        310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEW  389 (539)
Q Consensus       310 Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~  389 (539)
                      |+|||+..+     ....+...|+||+|+++..|++|..|+.-....+..             ....+ ...-.+-...|
T Consensus       195 y~a~E~~~~-----~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-------------~~~~~-~~~~~~~~~~~  255 (601)
T KOG0590|consen  195 YGAPEHLSG-----KAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-------------YSSWK-SNKGRFTQLPW  255 (601)
T ss_pred             CCCcccccc-----hhhcCCCcccccccccccccccCCCCcccccccccc-------------ceeec-ccccccccCcc
Confidence            999999864     123457899999999999999999998755433211             00111 11122234568


Q ss_pred             CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        390 STISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       390 ~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ..++..+.+++.++|..+|..|.+.+++..+||+..
T Consensus       256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  256 NSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccCChhhhhcccccccCCchhccccccccccccccc
Confidence            899999999999999999999999999999999987

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.49  E-value=1.3e-14  Score=149.53  Aligned_cols=86  Identities=40%  Similarity=0.702  Sum_probs=69.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||++.....           ...+.+||+.|+|||++..      ..+
T Consensus       146 ~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~  205 (340)
T PTZ00426        146 YLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDT-----------RTYTLCGTPEYIAPEILLN------VGH  205 (340)
T ss_pred             HHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCC-----------CcceecCChhhcCHHHHhC------CCC
Confidence            3467799999999999999   4556799999998754321           1224578999999998852      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       206 ~~~~DiwSlGvil~ell~G~~Pf~~~  231 (340)
T PTZ00426        206 GKAADWWTLGIFIYEILVGCPPFYAN  231 (340)
T ss_pred             CccccccchhhHHHHHhcCCCCCCCC
Confidence            78999999999999999999999763

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=2.1e-14  Score=145.95  Aligned_cols=89  Identities=40%  Similarity=0.709  Sum_probs=69.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++........        .....+|++.|+|||++..      ..+
T Consensus       108 ~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  170 (312)
T cd05585         108 NLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDD--------KTNTFCGTPEYLAPELLLG------HGY  170 (312)
T ss_pred             HHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCC--------ccccccCCcccCCHHHHcC------CCC
Confidence            4566799999999999999   4456799999998753211111        1224578999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       171 ~~~~DvwslGvil~el~tg~~pf~~~  196 (312)
T cd05585         171 TKAVDWWTLGVLLYEMLTGLPPFYDE  196 (312)
T ss_pred             CCccceechhHHHHHHHhCCCCcCCC
Confidence            88999999999999999999999753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.49  E-value=1.6e-14  Score=148.03  Aligned_cols=90  Identities=37%  Similarity=0.537  Sum_probs=69.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.........       .....+|++.|+|||++..     ...+
T Consensus       120 ~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~  184 (332)
T cd05614         120 HLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSKEFLSEEKE-------RTYSFCGTIEYMAPEIIRG-----KGGH  184 (332)
T ss_pred             HHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCccccccCCC-------ccccccCCccccCHHHhcC-----CCCC
Confidence            44667899999999999994   4567999999987543221111       1224579999999998753     2346


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||..
T Consensus       185 ~~~~DiwslG~il~elltg~~pf~~  209 (332)
T cd05614         185 GKAVDWWSLGILIFELLTGASPFTL  209 (332)
T ss_pred             CCccccccchhhhhhhhcCCCCCCC
Confidence            7889999999999999999999964

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.49  E-value=2.3e-14  Score=146.03  Aligned_cols=89  Identities=33%  Similarity=0.568  Sum_probs=69.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.+||+|||++........        .....+|++.|+|||++..      ..+
T Consensus       111 ~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  173 (316)
T cd05592         111 FLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNGEG--------KASTFCGTPDYIAPEILKG------QKY  173 (316)
T ss_pred             HHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCeECCCCCC--------ccccccCCccccCHHHHcC------CCC
Confidence            44667999999999999994   456799999998754221111        1124568999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       174 ~~~~DvwslG~il~ell~G~~Pf~~~  199 (316)
T cd05592         174 NESVDWWSFGVLLYEMLIGQSPFHGE  199 (316)
T ss_pred             CCcccchhHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.48  E-value=1.3e-14  Score=150.60  Aligned_cols=97  Identities=40%  Similarity=0.780  Sum_probs=71.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCC---------------------------CCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH---------------------------SPLATPL  173 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~---------------------------~~~~~~~  173 (539)
                      +.|.++|+||||||+||++   +..+.++|+|||++..........                           .......
T Consensus       116 ~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (360)
T cd05627         116 AIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQL  192 (360)
T ss_pred             HHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccccccccccccccccCCccccccccccccccccccccccccc
Confidence            4466799999999999999   445679999999875432211000                           0000001


Q ss_pred             ccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        174 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       174 l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ....+||+.|+|||++.      ...++.++|+||+||++|+|++|.+||.+.
T Consensus       193 ~~~~~gt~~Y~APE~~~------~~~~~~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         193 AYSTVGTPDYIAPEVFM------QTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             ccccCCCccccCHHHHc------CCCCCCcceeccccceeeecccCCCCCCCC
Confidence            22457999999999875      356888999999999999999999999764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0695|consensus

Probab=99.48  E-value=2.8e-14  Score=138.26  Aligned_cols=87  Identities=30%  Similarity=0.506  Sum_probs=72.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||.||||.+|+|+   +..+++||.|+|+++.--.+..        ...+.+|||.|+|||+++      +..|
T Consensus       366 flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~gd--------~tstfcgtpnyiapeilr------geey  428 (593)
T KOG0695|consen  366 FLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGPGD--------TTSTFCGTPNYIAPEILR------GEEY  428 (593)
T ss_pred             HHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCCCc--------ccccccCCCcccchhhhc------cccc
Confidence            3466799999999999999   6778899999999753211111        234789999999999986      4679


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      +.++|+|++||+++||+.|+.||.
T Consensus       429 gfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  429 GFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             CceehHHHHHHHHHHHHcCCCCcc
Confidence            999999999999999999999996

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.48  E-value=2.6e-14  Score=145.64  Aligned_cols=89  Identities=33%  Similarity=0.570  Sum_probs=69.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.++|+|||++........        .....+|++.|+|||++.      ...+
T Consensus       111 ~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~------~~~~  173 (316)
T cd05620         111 FLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDN--------RASTFCGTPDYIAPEILQ------GLKY  173 (316)
T ss_pred             HHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCCeecccCCC--------ceeccCCCcCccCHHHHc------CCCC
Confidence            45667999999999999994   456799999998753211111        122457899999999885      2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       174 ~~~~DiwslGvil~el~~g~~Pf~~~  199 (316)
T cd05620         174 TFSVDWWSFGVLLYEMLIGQSPFHGD  199 (316)
T ss_pred             CcccchhhhHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.48  E-value=2e-14  Score=147.25  Aligned_cols=86  Identities=38%  Similarity=0.759  Sum_probs=69.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.....           ...+..|++.|+|||++..      ..+
T Consensus       133 ~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~  192 (329)
T PTZ00263        133 YLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPD-----------RTFTLCGTPEYLAPEVIQS------KGH  192 (329)
T ss_pred             HHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCC-----------CcceecCChhhcCHHHHcC------CCC
Confidence            4467799999999999999   4456799999998754321           1224578999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++|..||.+.
T Consensus       193 ~~~~DiwslG~il~elltg~~pf~~~  218 (329)
T PTZ00263        193 GKAVDWWTMGVLLYEFIAGYPPFFDD  218 (329)
T ss_pred             CCcceeechHHHHHHHHcCCCCCCCC
Confidence            88999999999999999999999753

>KOG0201|consensus

Probab=99.48  E-value=2.2e-14  Score=144.10  Aligned_cols=89  Identities=36%  Similarity=0.594  Sum_probs=72.4

Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+.|..+.+|||||+.||++...   +.+||+|||++..+.....        .-.+.+||+.|||||++.      ..+
T Consensus       125 ~ylH~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql~~~~~--------rr~tfvGTPfwMAPEVI~------~~~  187 (467)
T KOG0201|consen  125 DYLHSEKKIHRDIKAANILLSES---GDVKLADFGVAGQLTNTVK--------RRKTFVGTPFWMAPEVIK------QSG  187 (467)
T ss_pred             hhhhhcceecccccccceeEecc---CcEEEEecceeeeeechhh--------ccccccccccccchhhhc------ccc
Confidence            35677899999999999999543   6799999999744332211        114789999999999996      368


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      |+.++|+||||++.+||++|.+|+..
T Consensus       188 Y~~KADIWSLGITaiEla~GePP~s~  213 (467)
T KOG0201|consen  188 YDTKADIWSLGITAIELAKGEPPHSK  213 (467)
T ss_pred             ccchhhhhhhhHHHHHHhcCCCCCcc
Confidence            99999999999999999999999854

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.48  E-value=2.2e-14  Score=144.98  Aligned_cols=89  Identities=26%  Similarity=0.489  Sum_probs=68.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....++++.|+|||++..     ...+
T Consensus       118 ~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~  181 (303)
T cd07869         118 YIHQRYILHRDLKPQNLLIS---DTGELKLADFGLARAKSVPSH--------TYSNEVVTLWYRPPDVLLG-----STEY  181 (303)
T ss_pred             HHHHCCeecCCCCHHHEEEC---CCCCEEECCCCcceeccCCCc--------cCCCCcccCCCCChHHHcC-----CCCC
Confidence            45677999999999999994   456799999998753221111        1123568899999998742     2347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       182 ~~~~DiwslG~il~~l~~g~~pf~~  206 (303)
T cd07869         182 STCLDMWGVGCIFVEMIQGVAAFPG  206 (303)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            7889999999999999999999976

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.48  E-value=3.6e-14  Score=148.88  Aligned_cols=91  Identities=25%  Similarity=0.335  Sum_probs=70.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+||++.   ..+.+||+|||++........       ......+||+.|+|||++..      ..+
T Consensus       197 ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~------~~~  260 (391)
T PHA03212        197 YLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAACFPVDINA-------NKYYGWAGTIATNAPELLAR------DPY  260 (391)
T ss_pred             HHHhCCcccCCCChHhEEEc---CCCCEEEEeCCcccccccccc-------cccccccCccCCCChhhhcC------CCC
Confidence            45777999999999999994   456799999998743211110       01224579999999998752      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      +.++|+||+||++|+|++|..||.+..
T Consensus       261 ~~~~DiwSlGvil~elltg~~p~~~~~  287 (391)
T PHA03212        261 GPAVDIWSAGIVLFEMATCHDSLFEKD  287 (391)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCcCCcc
Confidence            899999999999999999999887643

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.48  E-value=2.9e-14  Score=148.56  Aligned_cols=94  Identities=34%  Similarity=0.644  Sum_probs=71.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.........       .....+|++.|+|||++....  ....+
T Consensus       157 ~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~--~~~~~  224 (370)
T cd05596         157 AIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGMV-------RCDTAVGTPDYISPEVLKSQG--GDGYY  224 (370)
T ss_pred             HHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCCcc-------cCCCCCCCcCeECHHHhccCC--CCCCC
Confidence            4577899999999999999   45567999999987543221110       112457999999999875311  12347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|.+||.+.
T Consensus       225 ~~~~DiwSlGvilyelltG~~Pf~~~  250 (370)
T cd05596         225 GRECDWWSVGVFLYEMLVGDTPFYAD  250 (370)
T ss_pred             CCceeeeehhHHHHHHHhCCCCcCCC
Confidence            88999999999999999999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	539
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-71
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		3e-70
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-71
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-67
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		1e-70
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-69
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		1e-32
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-32
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-32
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		8e-32
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-31
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-31
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-31
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-31
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-31
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-31
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-31
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-31
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-31
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		8e-31
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-29
3soa_A	444	Full-Length Human Camkii Length = 444		4e-29
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-28
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-27
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-27
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-27
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-27
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-27
2jam_B	304	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-27
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		9e-27
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		9e-27
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		9e-27
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-26
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-26
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-26
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-26
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-26
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		7e-26
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		9e-26
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-25
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-25
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-25
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-25
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-25
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-25
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-25
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-25
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-25
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-25
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-25
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-25
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		4e-25
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-25
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-25
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		4e-25
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		5e-25
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		6e-25
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		7e-25
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		7e-25
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		7e-25
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		7e-25
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		7e-25
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		8e-25
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-24
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-24
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-24
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-24
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		2e-24
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-24
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-24
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		5e-24
3kk8_A	284	Camkii Substrate Complex A Length = 284		5e-24
3kk9_A	282	Camkii Substrate Complex B Length = 282		5e-24
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-24
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-24
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-24
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-24
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		8e-24
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-23
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-23
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-23
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-23
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-23
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-23
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-23
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		6e-23
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-23
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		7e-23
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-22
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		5e-22
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		6e-22
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-21
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-21
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-21
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		5e-21
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-20
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-18
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-17
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-17
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-17
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-17
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		7e-17
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		1e-16
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-16
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-15
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-15
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-15
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-15
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-15
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-15
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-15
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-15
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-15
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-15
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-15
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-15
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-15
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-15
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-15
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-15
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-15
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-15
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		4e-15
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-15
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		4e-15
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-15
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-15
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-15
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-15
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-15
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-15
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-15
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		8e-15
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		8e-15
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		9e-15
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-14
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-14
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-14
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-14
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-14
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-14
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-14
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-14
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		6e-10
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-14
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-14
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-10
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-14
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-14
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-14
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-14
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-14
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-14
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-14
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-14
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-14
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-14
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-14
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-10
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-14
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-14
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-14
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-14
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-10
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-14
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-14
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-14
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-14
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-14
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-14
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-14
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-14
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-14
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-14
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-14
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-14
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-14
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-14
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-14
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-14
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-14
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-14
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-14
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-14
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-14
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-14
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-14
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-14
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-14
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-14
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-10
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-14
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		7e-14
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-14
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-09
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-14
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-14
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		9e-14
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-14
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-13
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-14
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-13
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-13
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-13
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-09
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-13
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-13
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-06
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		2e-13
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-13
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-13
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		3e-13
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-13
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-13
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-13
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-13
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-13
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-13
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-13
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-13
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-13
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-13
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-13
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-13
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-13
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-13
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-13
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-13
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		9e-13
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-12
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-12
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-12
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-12
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-12
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-12
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-12
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		6e-12
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		7e-12
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		7e-12
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-12
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		9e-12
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		9e-12
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		9e-12
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		9e-12
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-09
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-11
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		6e-09
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-11
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-09
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-09
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-11
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-11
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-11
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		4e-11
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-11
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-11
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-11
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		5e-11
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-09
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		5e-11
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-09
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		5e-11
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		7e-11
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		7e-11
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		8e-11
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		9e-11
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		9e-11
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		9e-11
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		9e-11
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-09
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		3e-10
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-10
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		4e-10
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		4e-10
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		4e-10
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		5e-10
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-08
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		7e-10
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-10
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		9e-10
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-09
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-09
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-08
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-09
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-09
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-09
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-09
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		7e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-09
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-09
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-07
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-09
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		5e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		7e-09
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-09
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-07
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		7e-09
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-08
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		7e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		7e-09
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		4e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		7e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		4e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		7e-09
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		7e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-08
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		5e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		5e-08
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		5e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		7e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		5e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		5e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		7e-08
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		7e-08
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		5e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		7e-08
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		5e-09
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		5e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		6e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		6e-09
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		7e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-08
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		7e-09
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-08
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-08
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-08
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-08
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-08
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-08
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-08
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-08
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-08
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-08
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		6e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		3e-08
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		3e-08
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-08
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		3e-08
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		3e-08
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-08
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-08
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-08
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-08
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-08
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-08
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-08
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		5e-08
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-08
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		6e-08
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-08
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-08
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		7e-08
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-08
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		8e-08
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-08
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		8e-08
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-07
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-07
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-07
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-07
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-07
4exu_A	371	Mapk13, Inactive Form Length = 371		2e-07
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-07
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-07
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-07
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-07
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-07
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-07
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-07
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-07
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-07
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-07
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-07
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-07
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		4e-07
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-07
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-07
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-07
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		4e-07
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-07
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		4e-07
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		4e-07
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-07
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-07
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-07
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-07
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-07
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-07
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		5e-07
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-07
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-07
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-07
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		1e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-06
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		1e-06
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		1e-06
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		1e-06
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		1e-06
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-06
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-06
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-06
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		2e-06
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-06
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		2e-06
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-06
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-06
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-04
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		2e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-06
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		2e-06
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-06
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-04
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		3e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-06
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		3e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-06
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-06
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		5e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		6e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		6e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		6e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		7e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		7e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		7e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		7e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		7e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-06
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		7e-06
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		7e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		7e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		8e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		7e-06
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		8e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		8e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		8e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		9e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		9e-06
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-05
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-05
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-05
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-05
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-05
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-05
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-05
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		1e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		1e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-05
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-05
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-05
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-05
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-05
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-05
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-05
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-05
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-05
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-05
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-05
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-05
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-05
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-05
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-05
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-05
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-05
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-05
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-05
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-05
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-05
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		3e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-05
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		3e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-05
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		3e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-05
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-05
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		4e-05
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		4e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		4e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		4e-05
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		5e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		6e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		6e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		6e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		8e-05
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		8e-05
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		8e-05
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		4e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-05
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		8e-05
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		9e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		9e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		9e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		1e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		1e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		8e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		1e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-04
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-04
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		1e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-04
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-04
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		2e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		5e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-04
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-04
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-04
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-04
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-04
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		2e-04
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		4e-04
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-04
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-04
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-04
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-04
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		3e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		6e-04
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		3e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		5e-04
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		3e-04
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		3e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		3e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		4e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		4e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		4e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		8e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		8e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		5e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		5e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		5e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		5e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		5e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		5e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		5e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		6e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-04
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		6e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-04
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		6e-04
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		6e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		6e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		8e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		8e-04

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  266 bits (680), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/249 (55%), Positives = 175/249 (70%), Gaps = 42/249 (16%)
Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
           F+D+Y+L+ ++LG+GA+A VQTC+N++T  EYAVKII+K PGH RSRVF+EVE  + CQG
Sbjct: 10  FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 105 HPNIIQLLEYYEDDEN-----------------HER-----------------------H 124
           H N+++L+E++E+++                  H+R                       +
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K IAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ 
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 245 ILFHSIQQG 253
           +LF SIQ+G
Sbjct: 248 MLFESIQEG 256

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  263 bits (671), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/190 (66%), Positives = 151/190 (79%), Gaps = 3/190 (1%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ 
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +LF SIQ+G Y+FP+ +W+ IS  AKDLI +LLV+DA++RLSAA VL+HPW+      + 
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN- 306
Query: 432 PLVTPQVIRR 441
            L TP V++R
Sbjct: 307 TLPTPMVLQR 316

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  266 bits (679), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 133/249 (53%), Positives = 165/249 (66%), Gaps = 42/249 (16%)
Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
           F+D+Y+L  E+LG+GAYA VQ  V++    EYAVKII+K  GHSRSRVF+EVET + CQG
Sbjct: 10  FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 105 HPNIIQLLEYYEDDEN-----------------------HERH----------------- 124
           + NI++L+E++EDD                         +ER                  
Sbjct: 70  NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K IAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC-TPITTPELTTPCGSAEYM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
           APE+V  F   +A+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct: 189 APEVVEVFT-DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 245 ILFHSIQQG 253
            LF SIQ+G
Sbjct: 248 KLFESIQEG 256

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  253 bits (645), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 114/172 (66%), Positives = 140/172 (81%), Gaps = 2/172 (1%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC  P+++SPVK+CDFDLGSG+K N S  +P+ TP L TP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC-TPITTPELTTPCGSAEYM 188
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V  F   +A+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C  CQ 
Sbjct: 189 APEVVEVFT-DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            LF SIQ+G Y+FP+ +W+ IS EAKDLI +LLV+DA++RLSAA VL+HPW+
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/249 (55%), Positives = 174/249 (69%), Gaps = 42/249 (16%)
Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
           F+D+Y+L+ ++LG+GA+A VQTC+N++T  EYAVKII+K PGH RSRVF+EVE  + CQG
Sbjct: 10  FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 105 HPNIIQLLEYYEDDEN-----------------HER-----------------------H 124
           H N+++L+E++E+++                  H+R                       +
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K IAHRDLKPENILC HP+Q+SPVK+CDF LGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ 
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 245 ILFHSIQQG 253
           +LF SIQ+G
Sbjct: 248 MLFESIQEG 256

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/190 (65%), Positives = 150/190 (78%), Gaps = 3/190 (1%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GIAHRDLKPENILC HP+Q+SPVK+CDF LGSGIK N    SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ 
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +LF SIQ+G Y+FP+ +W+ IS  AKDLI +LLV+DA++RLSAA VL+HPW+      + 
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN- 306
Query: 432 PLVTPQVIRR 441
            L TP V++R
Sbjct: 307 TLPTPMVLQR 316

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 177 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 228
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 229 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 268
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 269 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
                 PL T +V++ ++   E +     SA++  RV  +   I K
Sbjct: 329 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 374

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 183 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 234
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 235 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 274
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 275 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
                 PL T +V++ ++   E +     SA++  RV  +   I K
Sbjct: 335 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 380

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 133 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 184
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 185 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 224
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 225 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
                 PL T +V++ ++   E +     SA++  RV  +   I K
Sbjct: 285 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 330

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 117/217 (53%), Gaps = 30/217 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 133 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 184
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 185 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 224
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 225 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRV 461
                 PL T +V++ ++   E +     SA++  RV
Sbjct: 285 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRV 321

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 29/211 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            IAHRD+KPEN+L    ++ + +KL DF        N           L TP  +  ++A
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----------LQTPCYTPYYVA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE+    +GPE   YDK CD+WSLGV++YILLCG+PPFY N G+           A    
Sbjct: 198 PEV----LGPEK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----------AISPG 240
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-HR 431
           +   I+ G Y FP  EWS +S++AK LIR LL  D  +RL+    + HPWI+ +      
Sbjct: 241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 300
Query: 432 PLVTPQVIRRNQSA-RELSSFAESAMSANRV 461
           PL T +V++ ++    E+     SA++  RV
Sbjct: 301 PLHTARVLQEDKDHWDEVKEEMTSALATMRV 331

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 29/211 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            IAHRD+KPEN+L    ++ + +KL DF        N           L TP  +  ++A
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----------LQTPCYTPYYVA 178
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE+    +GPE   YDK CD+WSLGV++YILLCG+PPFY N G+           A    
Sbjct: 179 PEV----LGPEK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----------AISPG 221
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-HR 431
           +   I+ G Y FP  EWS +S++AK LIR LL  D  +RL+    + HPWI+ +      
Sbjct: 222 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 281
Query: 432 PLVTPQVIRRNQSA-RELSSFAESAMSANRV 461
           PL T +V++ ++    E+     SA++  RV
Sbjct: 282 PLHTARVLQEDKDHWDEVKEEMTSALATMRV 312

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF        + S+  P  TP       
Sbjct: 131 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY------ 182
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 183 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 222
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 223 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRV 461
                 PL T +V++ ++   E +     SA++  RV
Sbjct: 283 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRV 319

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 139 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 190
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 191 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 230
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 231 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
                 PL T +V++ ++   E
Sbjct: 291 TKVPQTPLHTSRVLKEDKERWE 312

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 132 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 183
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 184 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 223
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 224 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
                 PL T +V++ ++   E
Sbjct: 284 TKVPQTPLHTSRVLKEDKERWE 305

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 131 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 182
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 183 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 222
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 223 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
                 PL T +V++ ++   E
Sbjct: 283 TKVPQTPLHTSRVLKEDKERWE 304

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 137 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 188
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 189 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 228
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 229 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
                 PL T +V++ ++   E
Sbjct: 289 TKVPQTPLHTSRVLKEDKERWE 310

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 138 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 189
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 190 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 229
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 230 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
                 PL T +V++ ++   E
Sbjct: 290 TKVPQTPLHTSRVLKEDKERWE 311

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 147 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 198
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD+WSLGV++YILLCGYPPFY N G           
Sbjct: 199 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 238
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +
Sbjct: 239 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
                 PL T +V++ ++   E
Sbjct: 299 TKVPQTPLHTSRVLKEDKERWE 320

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score =  131 bits (330), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 115/226 (50%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF    G    T+ H+ L TP   TP  
Sbjct: 177 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 228
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              ++APE+    +GPE   YDK CD WSLGV+ YILLCGYPPFY N G           
Sbjct: 229 ---YVAPEV----LGPEK--YDKSCDXWSLGVIXYILLCGYPPFYSNHG----------- 268
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
            A        I+ G Y+FP  EWS +S+E K LIR LL  +  +R +      HPWI  +
Sbjct: 269 LAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
                 PL T +V++ ++   E +     SA++  RV  +   I K
Sbjct: 329 TKVPQTPLHTSRVLKEDKERWEDVKEEXTSALATMRVDYEQIKIKK 374

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           +   +  H  Q+IL    H    GI HRDLKPEN+L     + + VKL DF L   ++ +
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
                  A        G+  +++PE++          Y K  D+W+ GV++YILL GYPP
Sbjct: 160 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDMWACGVILYILLVGYPP 205
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
           F+    ED            Q  L+  I+ G YDFP  EW T++ EAKDLI ++L  +  
Sbjct: 206 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 410 KRLSAASVLKHPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHF 466
           KR++A+  LKHPWI   ST  +      T   +++  + R+L     + M A R      
Sbjct: 251 KRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAK 310
Query: 467 SICKNP 472
           S+ K P
Sbjct: 311 SLLKKP 316

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  125 bits (315), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 121/246 (49%), Gaps = 41/246 (16%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           +   +  H  Q+IL    H  Q G+ HR+LKPEN+L     + + VKL DF L   ++  
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
                  A        G+  +++PE++          Y K  DLW+ GV++YILL GYPP
Sbjct: 167 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPP 212
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
           F+    ED            Q  L+  I+ G YDFP  EW T++ EAKDLI ++L  +  
Sbjct: 213 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 257
Query: 410 KRLSAASVLKHPWISTAGTA----HRPLVTPQVIRRNQSARELSSFAESAMSANRVILQH 465
           KR++AA  LKHPWIS   T     HR   T   +++  + R+L     + M A R    +
Sbjct: 258 KRITAAEALKHPWISHRSTVASCMHRQ-ETVDCLKKFNARRKLKGAILTVMLATR----N 312
Query: 466 FSICKN 471
           FS+ K 
Sbjct: 313 FSVRKQ 318

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 102/199 (51%), Gaps = 32/199 (16%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           +   +  H  Q+IL    H  Q G+ HRDLKPEN+L     + + VKL DF L   ++  
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
                  A        G+  +++PE++          Y K  DLW+ GV++YILL GYPP
Sbjct: 178 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPP 223
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
           F+    ED            Q  L+  I+ G YDFP  EW T++ EAKDLI ++L  +  
Sbjct: 224 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 268
Query: 410 KRLSAASVLKHPWISTAGT 428
           KR++AA  LKHPWIS   T
Sbjct: 269 KRITAAEALKHPWISHRST 287

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 35/230 (15%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           +   +  H  Q+IL    H    GI HRDLKPEN+L     + + VKL DF L   ++ +
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
                  A        G+  +++PE++          Y K  D+W+ GV++YILL GYPP
Sbjct: 160 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDMWACGVILYILLVGYPP 205
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
           F+    ED            Q  L+  I+ G YDFP  EW T++ EAKDLI ++L  +  
Sbjct: 206 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 410 KRLSAASVLKHPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAM 456
           KR++A+  LKHPWI   ST  +      T   +++  + R+L     + M
Sbjct: 251 KRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM 300

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPEN+L    ++ + +K+ DF L +  +    +   L         G+A +
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---------GTAYY 204
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YD++CD+WS+GV+++ILL GYPPF G                 Q
Sbjct: 205 IAPEVLR-------KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------------Q 243
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           EIL   +++G Y F   EW  +S+ AKDLI+++L  D+++R+SA   L+HPWI
Sbjct: 244 EIL-RKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 35/223 (15%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           +   +  H  Q+IL    H  Q G+ HRDLKPEN+L     + + VKL DF L   ++ +
Sbjct: 100 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
                  A        G+  +++PE++          Y K  D+W+ GV++YILL GYPP
Sbjct: 160 QQAWFGFA--------GTPGYLSPEVLRK------EAYGKPVDIWACGVILYILLVGYPP 205
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
           F+    ED            Q  L+  I+ G YDFP  EW T++ EAK+LI ++L  +  
Sbjct: 206 FWD---ED------------QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 250
Query: 410 KRLSAASVLKHPWI---STAGTAHRPLVTPQVIRRNQSARELS 449
           KR++A   LKHPW+   ST  +      T + +++  + R+L 
Sbjct: 251 KRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPENIL    ++   +K+ DF L +  + NT +            +G+A +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YD++CD+WS GV++YILL G PPFYG    D             
Sbjct: 190 IAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             +   ++ G Y F   +W TISD+AKDLIR++L      R++A   L+HPWI
Sbjct: 230 --ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score =  119 bits (297), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 27/173 (15%)
Query: 252 QGIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           QG+ HRDLKP NIL V        +++CDF     ++            LL+TP  +A F
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLMTPCYTANF 186
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E  GYD  CD+WSLGV++Y +L GY PF  N  +D             
Sbjct: 187 VAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDT-----------P 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           E +   I  G +    G W+++SD AKDL+ ++L  D  +RL+AA VL+HPWI
Sbjct: 229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  118 bits (295), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPENIL    ++   +K+ DF L +  + NT +            +G+A +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YD++CD+WS GV++YILL G PPFYG    D             
Sbjct: 190 IAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             +   ++ G Y F   +W TISD+AKDLIR++L      R++A   L+HPWI
Sbjct: 230 --ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  118 bits (295), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPENIL    ++   +K+ DF L +  + NT +            +G+A +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YD++CD+WS GV++YILL G PPFYG    D             
Sbjct: 190 IAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             +   ++ G Y F   +W TISD+AKDLIR++L      R++A   L+HPWI
Sbjct: 230 --ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  118 bits (295), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 52/263 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI       +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSARELSSFAESA 455
             T Q + R  SA  +  F + A
Sbjct: 278 KDTQQALSRKASAVNMEKFKKFA 300

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 32/224 (14%)
Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H   E + H  Q  I HRDLKPEN+L     + + VKL DF L   ++         A  
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA-- 194
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                 G+  +++PE++          Y K  D+W+ GV++YILL GYPPF+    ED  
Sbjct: 195 ------GTPGYLSPEVLRK------DPYGKPVDIWACGVILYILLVGYPPFWD---ED-- 237
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                     Q  L+  I+ G YDFP  EW T++ EAK+LI ++L  +  KR++A   LK
Sbjct: 238 ----------QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALK 287
Query: 420 HPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
           HPW+   ST  +      T + +R+  + R+L     + M  +R
Sbjct: 288 HPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVSR 331

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPEN+L     + + +K+ DF L +  +    +   L         G+A +
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---------GTAYY 172
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YD++CD+WS GV++YILLCGYPPF G                 Q
Sbjct: 173 IAPEVLR-------KKYDEKCDVWSCGVILYILLCGYPPFGGQTD--------------Q 211
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           EIL   +++G + F   +W+ +SDEAK L++ +L  +  KR+SA   L HPWI
Sbjct: 212 EIL-KRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPEN+L     + + +K+ DF L +  +    +   L         G+A +
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---------GTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YD++CD+WS GV++YILLCGYPPF G                 Q
Sbjct: 190 IAPEVLR-------KKYDEKCDVWSCGVILYILLCGYPPFGGQTD--------------Q 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           EIL   +++G + F   +W+ +SDEAK L++ +L  +  KR+SA   L HPWI
Sbjct: 229 EIL-KRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 31/174 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRD+KPENIL  + + L  +K+ DF L S    +  +   L         G+A +
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---------GTAYY 214
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          Y+++CD+WS GV++YILLCGYPPF G   +D             
Sbjct: 215 IAPEVL-------KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------------- 254
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             +   +++G Y F   +W  ISDEAK+LI+ +L  D  KR +A   L   WI 
Sbjct: 255 --IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  115 bits (288), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 121/261 (46%), Gaps = 52/261 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ R D     VV+ + L      +    +       E     ++IL      H+  + I
Sbjct: 84  YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +KL DF L   I+      +   TP         EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+       P
Sbjct: 227 -LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSFAE 453
           + T Q + R +S   L +F +
Sbjct: 279 VDTQQAMVRRESVVNLENFKK 299

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score =  115 bits (288), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI       +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
             T Q + R  SA
Sbjct: 278 KDTQQALSRKASA 290

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI       +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
             T Q + R  SA
Sbjct: 278 KDTQQALSRKASA 290

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI       +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
             T Q + R  SA
Sbjct: 278 KDTQQALSRKASA 290

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 252 QGIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           QG+ HRDLKP NIL V        +++CDF     ++            LL TP  +A F
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLXTPCYTANF 186
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E  GYD  CD+WSLGV++Y  L GY PF  N  +D             
Sbjct: 187 VAPEVL------ERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDT-----------P 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           E +   I  G +    G W+++SD AKDL+ + L  D  +RL+AA VL+HPWI
Sbjct: 229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 29/175 (16%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           QG+ HRDLKP NIL V  +  +P  +++CDF     ++            LL+TP  +A 
Sbjct: 140 QGVVHRDLKPSNILYVD-ESGNPECLRICDFGFAKQLRAENG--------LLMTPCYTAN 190
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APE++      +  GYD+ CD+WSLG+++Y +L GY PF  N   D            
Sbjct: 191 FVAPEVL------KRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSD----------TP 233
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +EIL   I  G +    G W+T+S+ AKDL+ ++L  D  +RL+A  VL+HPW++
Sbjct: 234 EEILTR-IGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 31/171 (18%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            +AHRDLKPEN L +     SP+KL DF L +  K            ++ T VG+  +++
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---------PGKMMRTKVGTPYYVS 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           P+++    GPE       CD WS GV++Y+LLCGYPPF              +     E+
Sbjct: 194 PQVLEGLYGPE-------CDEWSAGVMMYVLLCGYPPF--------------SAPTDXEV 232
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +   I++G + FPE +W  +S +A+ LIRRLL K  ++R+++   L+H W 
Sbjct: 233 ML-KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ R D     VV+ + L      +    +       E     ++IL      H+  + I
Sbjct: 84  YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +KL DF L   I+      +   TP         EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+       P
Sbjct: 227 -LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
           +   Q + R +S   L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 32/213 (15%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + GI HRDLKPEN+L   P   +P+K+ DF L   ++            L+ T  G+  +
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------LMKTVCGTPGY 216
Query: 311 MAPEIVNA-FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
            APEI+     GPE        D+WS+G++ YILLCG+ PFY   G+             
Sbjct: 217 CAPEILRGCAYGPE-------VDMWSVGIITYILLCGFEPFYDERGD------------- 256
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
            + +F  I    Y F    W  +S  AKDL+R+L+V D +KRL+    L+HPW++     
Sbjct: 257 -QFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN 315
Query: 430 HRPLVTPQ-VIRRNQSARELSSFAESAMSANRV 461
              + T Q  ++   + R+L +  ++ ++++R+
Sbjct: 316 FVHMDTAQKKLQEFNARRKLKAAVKAVVASSRL 348

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 29/175 (16%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           QG+ HRDLKP NIL V  +  +P  +++CDF     ++            LL+TP  +A 
Sbjct: 140 QGVVHRDLKPSNILYVD-ESGNPECLRICDFGFAKQLRAENG--------LLMTPCYTAN 190
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APE++      +  GYD+ CD+WSLG+++Y +L GY PF  N   D            
Sbjct: 191 FVAPEVL------KRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSD----------TP 233
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +EIL   I  G +    G W+T+S+ AKDL+ ++L  D  +RL+A  VL+HPW++
Sbjct: 234 EEILTR-IGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 31/171 (18%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            +AHRDLKPEN L +     SP+KL DF L +  K            ++ T VG+  +++
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---------PGKMMRTKVGTPYYVS 176
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           P+++    GPE       CD WS GV++Y+LLCGYPPF              +     E+
Sbjct: 177 PQVLEGLYGPE-------CDEWSAGVMMYVLLCGYPPF--------------SAPTDXEV 215
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +   I++G + FPE +W  +S +A+ LIRRLL K  ++R+++   L+H W 
Sbjct: 216 ML-KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ R D     VV+ + L      +    +       E     ++IL      H+  + I
Sbjct: 84  YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +KL DF L   I+      +   TP         EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+       P
Sbjct: 227 -LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
           +   Q + R +S   L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKPEN+L    D+ S + + DF L       + +  P    +L T  G+  ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++          Y K  D WS+GV+ YILLCGYPPFY                     
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
           LF  I +  Y+F    W  ISD AKD IR L+ KD  KR +    L+HPWI+      + 
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 285
Query: 433 L---VTPQVIRRNQSARELSSFAESAMSANRVILQ 464
           +   V+ Q+ +    ++   +F  +A+  +   LQ
Sbjct: 286 IHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQ 320

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKPEN+L    D+ S + + DF L       + +  P    +L T  G+  ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++          Y K  D WS+GV+ YILLCGYPPFY                     
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
           LF  I +  Y+F    W  ISD AKD IR L+ KD  KR +    L+HPWI+      + 
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 285
Query: 433 L---VTPQVIRRNQSARELSSFAESAMSANRVILQ 464
           +   V+ Q+ +    ++   +F  +A+  +   LQ
Sbjct: 286 IHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQ 320

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ R D     VV+ + L      +    +       E     ++IL      H+  + I
Sbjct: 84  YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +KL DF L   I+      +   TP         EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+       P
Sbjct: 227 -LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
           +   Q + R +S   L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP          F+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------AFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI       +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
             T Q + R  SA
Sbjct: 278 KDTQQALSRKASA 290

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 99/207 (47%), Gaps = 33/207 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKPEN+L    D+ S + + DF L       + +  P    +L T  G+  ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++          Y K  D WS+GV+ YILLCGYPPFY                     
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
           LF  I +  Y+F    W  ISD AKD IR L+ KD  KR +    L+HPWI+      + 
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 285
Query: 433 L---VTPQVIRRNQSARELSSFAESAM 456
           +   V+ Q+ +    ++   +F  +A+
Sbjct: 286 IHQSVSEQIKKNFAKSKWKQAFNATAV 312

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ R D     VV+ + L      +    +       E     ++IL      H+  + I
Sbjct: 84  YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +KL DF L   I+      +   TP         EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
              +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+       P
Sbjct: 227 -LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
           +   Q + R +S   L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI----QQGIAHRDLKPEN 263
           S   +V+ L+ G   F      +  +   +  H  Q+IL  SI      GI HR+LKPEN
Sbjct: 101 SFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPEN 158
Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
           +L     + + VKL DF L   +  + + H    TP          +++PE++      +
Sbjct: 159 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL------K 203
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
              Y K  D+W+ GV++YILL GYPPF+    ED            Q  L+  I+ G YD
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWD---ED------------QHRLYAQIKAGAYD 248
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI----STAGTAHRPLVTPQVI 439
           +P  EW T++ EAK LI  +L  + +KR++A   LK PWI      A   HR   T   +
Sbjct: 249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQ-DTVDCL 307
Query: 440 RRNQSARELSSFAESAMSANR 460
           ++  + R+L     + M A R
Sbjct: 308 KKFNARRKLKGAILTTMIATR 328

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  112 bits (280), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 95/195 (48%), Gaps = 34/195 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + GI HRDLKPEN+L    D+ S + + DF L S ++    V S        T  G+  +
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGL-SKMEGKGDVMS--------TACGTPGY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          Y K  D WS+GV+ YILLCGYPPFY                   
Sbjct: 189 VAPEVL------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
             LF  I +  Y+F    W  ISD AKD IR L+ KD  KR +     +HPWI+     +
Sbjct: 230 --LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALN 287
Query: 431 RPL---VTPQVIRRN 442
           + +   V+ Q IR+N
Sbjct: 288 KNIHESVSAQ-IRKN 301

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 85/172 (49%), Gaps = 30/172 (17%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKPEN+L    D+ S + + DF L       + +  P    +L T  G+  ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++          Y K  D WS+GV+ YILLCGYPPFY                     
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           LF  I +  Y+F    W  ISD AKD IR L+ KD  KR +    L+HPWI+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 82  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 134
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 185
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 186 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 225 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 82  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 134
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 185
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 186 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 225 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI 
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D     V++ + L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI 
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ + D+  +G      L      +    E       E     ++IL      HS+Q  I
Sbjct: 83  YENKTDVILIGE-----LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +K+ DF L   I F     +   TP         EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T  
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 23/194 (11%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           G+ HRDLKPEN+L    +    +K+ DF      +     + PL TP       +  + A
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFA---RLKPPDNQPLKTPCF-----TLHYAA 177
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PE++N       +GYD+ CDLWSLGV++Y +L G  PF  +        R  TC +  EI
Sbjct: 178 PELLNQ------NGYDESCDLWSLGVILYTMLSGQVPFQSH-------DRSLTCTSAVEI 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT-AHR 431
           +   I++G + F    W  +S EAKDLI+ LL  D  KRL  + +  + W+      +  
Sbjct: 225 M-KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283
Query: 432 PLVTPQVIRRNQSA 445
           PL+TP ++  + +A
Sbjct: 284 PLMTPDILGSSGAA 297

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 93/204 (45%), Gaps = 54/204 (26%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI   IAHRD+KPEN+L       + +KL DF                          
Sbjct: 133 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---------------------- 168
Query: 307 SAEFMAPEIVNAFMGPEASG--YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
                           E +G  YDK CD+WSLGV++YILLCGYPPFY N G         
Sbjct: 169 ----------------ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--------- 203
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI- 423
              A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI 
Sbjct: 204 --LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261
Query: 424 STAGTAHRPLVTPQVIRRNQSARE 447
            +      PL T +V++ ++   E
Sbjct: 262 QSTKVPQTPLHTSRVLKEDKERWE 285

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
           Y+ R D     VV+ + L      +    +       E     ++IL      H+  + I
Sbjct: 84  YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           AH DLKPENI+ +  +   P +KL DF L   I+      +   TP         EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           EIVN   +G EA       D+WS+GV+ YILL G  PF G+  ++               
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+
Sbjct: 227 -LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 108/221 (48%), Gaps = 35/221 (15%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E L +     I HRD+KPEN+L    +  +PVKL DF  G  I+   S        +   
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDF--GVAIQLGES------GLVAGG 192
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            VG+  FMAPE+V      +   Y K  D+W  GV+++ILL G  PFYG           
Sbjct: 193 RVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT---------- 236
Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 +E LF  I +G Y     +WS IS+ AKDL+RR+L+ D  +R++    L HPW+
Sbjct: 237 ------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 424 ST----AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
                 A   H P    Q +R+  + R+L     +A+S+++
Sbjct: 291 KERDRYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 330

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 35/195 (17%)
Query: 233 WQRGETCHACQEILFHSI----QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
           +   +  H  Q+IL  SI      GI HR+LKPEN+L     + + VKL DF L   +  
Sbjct: 102 YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
           + + H    TP          +++PE++      +   Y K  D+W+ GV++YILL GYP
Sbjct: 161 SEAWHGFAGTP---------GYLSPEVL------KKDPYSKPVDIWACGVILYILLVGYP 205
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
           PF+    ED            Q  L+  I+ G YD+P  EW T++ EAK LI  +L  + 
Sbjct: 206 PFWD---ED------------QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 250
Query: 409 RKRLSAASVLKHPWI 423
           +KR++A   LK PWI
Sbjct: 251 KKRITADQALKVPWI 265

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 40/232 (17%)
Query: 208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI----QQGIAHRDLKPEN 263
           S   +V+ L+ G   F      +  +   +  H  Q+IL  SI      GI HR+LKPEN
Sbjct: 78  SFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPEN 135
Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
           +L     + + VKL DF L   +  + + H    TP          +++PE++      +
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL------K 180
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
              Y K  D+W+ GV++YILL GYPPF+    ED            Q  L+  I+ G YD
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWD---ED------------QHRLYAQIKAGAYD 225
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI----STAGTAHR 431
           +P  EW T++ EAK LI  +L  + +KR++A   LK PWI      A   HR
Sbjct: 226 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHR 277

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 40/232 (17%)
Query: 208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI----QQGIAHRDLKPEN 263
           S   +V+ L+ G   F      +  +   +  H  Q+IL  SI      GI HR+LKPEN
Sbjct: 77  SFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPEN 134
Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
           +L     + + VKL DF L   +  + + H    TP          +++PE++      +
Sbjct: 135 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL------K 179
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
              Y K  D+W+ GV++YILL GYPPF+    ED            Q  L+  I+ G YD
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWD---ED------------QHRLYAQIKAGAYD 224
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI----STAGTAHR 431
           +P  EW T++ EAK LI  +L  + +KR++A   LK PWI      A   HR
Sbjct: 225 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHR 276

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 105/221 (47%), Gaps = 40/221 (18%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENIL 265
           VV+ + L      +    E       E     ++IL      HS  + IAH DLKPENI+
Sbjct: 83  VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIM 140
Query: 266 CVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF-MGPE 323
            +  +  +P +KL DF +   I+      +   TP         EF+APEIVN   +G E
Sbjct: 141 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---------EFVAPEIVNYEPLGLE 191
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
           A       D+WS+GV+ YILL G  PF G   ++                  +I   +YD
Sbjct: 192 A-------DMWSIGVITYILLSGASPFLGETKQET---------------LTNISAVNYD 229
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           F E  +S  S+ AKD IRRLLVKD ++R++ A  L+H WI 
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  108 bits (270), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPEN+L     + + +++ DF L +  +         A+  +   +G+A ++AP
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++         YD++CD+WS GV++YILL G PPF G               A +  +
Sbjct: 198 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 235
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
              +++G Y F   +W  +S+ AKDLIR++L      R+SA   L H WI T       +
Sbjct: 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 295
Query: 434 VTPQV------IRRNQSARELSSFA 452
             P +      IR+ Q  ++L+  A
Sbjct: 296 DVPSLDNAILNIRQFQGTQKLAQAA 320

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  108 bits (270), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPEN+L     + + +++ DF L +  +         A+  +   +G+A ++AP
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 220
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++         YD++CD+WS GV++YILL G PPF G               A +  +
Sbjct: 221 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 258
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
              +++G Y F   +W  +S+ AKDLIR++L      R+SA   L H WI T       +
Sbjct: 259 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 318
Query: 434 VTPQV------IRRNQSARELSSFA 452
             P +      IR+ Q  ++L+  A
Sbjct: 319 DVPSLDNAILNIRQFQGTQKLAQAA 343

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  108 bits (270), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPEN+L     + + +++ DF L +  +         A+  +   +G+A ++AP
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 221
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++         YD++CD+WS GV++YILL G PPF G               A +  +
Sbjct: 222 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 259
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
              +++G Y F   +W  +S+ AKDLIR++L      R+SA   L H WI T       +
Sbjct: 260 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 319
Query: 434 VTPQV------IRRNQSARELSSFA 452
             P +      IR+ Q  ++L+  A
Sbjct: 320 DVPSLDNAILNIRQFQGTQKLAQAA 344

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  108 bits (270), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 104/221 (47%), Gaps = 40/221 (18%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENIL 265
           VV+ + L      +    E       E     ++IL      HS  + IAH DLKPENI+
Sbjct: 90  VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIM 147
Query: 266 CVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF-MGPE 323
            +  +  +P +KL DF +   I+      +   TP         EF+APEIVN   +G E
Sbjct: 148 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---------EFVAPEIVNYEPLGLE 198
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
           A       D+WS+GV+ YILL G  PF G   ++                  +I   +YD
Sbjct: 199 A-------DMWSIGVITYILLSGASPFLGETKQET---------------LTNISAVNYD 236
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           F E  +S  S+ AKD IRRLLVKD ++R+  A  L+H WI 
Sbjct: 237 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 104/221 (47%), Gaps = 40/221 (18%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENIL 265
           VV+ + L      +    E       E     ++IL      HS  + IAH DLKPENI+
Sbjct: 104 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIM 161
Query: 266 CVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF-MGPE 323
            +  +  +P +KL DF +   I+      +   TP         EF+APEIVN   +G E
Sbjct: 162 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---------EFVAPEIVNYEPLGLE 212
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
           A       D+WS+GV+ YILL G  PF G   ++                  +I   +YD
Sbjct: 213 A-------DMWSIGVITYILLSGASPFLGETKQET---------------LTNISAVNYD 250
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           F E  +S  S+ AKD IRRLLVKD ++R+  A  L+H WI 
Sbjct: 251 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 31/172 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPEN+L     + + +++ DF L +  +         A+  +   +G+A ++AP
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++         YD++CD+WS GV++YILL G PPF G               A +  +
Sbjct: 204 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 241
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
              +++G Y F   +W  +S+ AKDLIR++L      R+SA   L H WI T
Sbjct: 242 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPEN+L     + + +++ DF L +  +         A+      +G+A ++AP
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKXKDKIGTAYYIAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E+++         YD++CD+WS GV++YILL G PPF G               A +  +
Sbjct: 198 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 235
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
              +++G Y F   +W  +S+ AKDLIR+ L      R+SA   L H WI T       +
Sbjct: 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISV 295
Query: 434 VTPQV------IRRNQSARELSSFA 452
             P +      IR+ Q  ++L+  A
Sbjct: 296 DVPSLDNAILNIRQFQGTQKLAQAA 320

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 180
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 181 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 223
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 224 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 271 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 319
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 320 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 362
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 363 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 180
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 181 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 223
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 224 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 180
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 181 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 223
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 224 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 131 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 179
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 180 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 222
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 223 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  105 bits (262), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 138 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 186
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 187 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 229
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 230 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
           + GI HRDLKPEN+L    ++   +K+ DF            HS +   T L+ T  G+ 
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 305
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            ++APE++   +    +GY++  D WSLGV+++I L GYPPF              + H 
Sbjct: 306 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 348
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 349 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            I HRDLKPENIL    D    +KL DF     +     + S   TP          ++A
Sbjct: 144 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTP---------SYLA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+   M     GY K  D+WS GV++Y LL G PPF+               H  Q +
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---------------HRKQML 236
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +   I  G+Y F   EW   SD  KDL+ R LV   +KR +A   L HP+ 
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            I HRDLKPENIL    D    +KL DF     +     +     TP          ++A
Sbjct: 144 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTP---------SYLA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+   M     GY K  D+WS GV++Y LL G PPF+               H  Q +
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---------------HRKQML 236
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +   I  G+Y F   EW   SD  KDL+ R LV   +KR +A   L HP+ 
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            I HRDLKPENIL    D    +KL DF     +     +     TP          ++A
Sbjct: 131 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTP---------SYLA 178
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+   M     GY K  D+WS GV++Y LL G PPF+               H  Q +
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---------------HRKQML 223
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +   I  G+Y F   EW   SD  KDL+ R LV   +KR +A   L HP+  
Sbjct: 224 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 37/184 (20%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E + H  Q  I H DLKPENILCV+ D    +K+ DF L    K    +     TP    
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDA-KQIKIIDFGLARRYKPREKLKVNFGTP---- 252
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKR---CDLWSLGVVVYILLCGYPPFYGNCGEDCGW 360
                EF+APE+VN         YD      D+WS+GV+ Y+LL G  PF G+   +   
Sbjct: 253 -----EFLAPEVVN---------YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-- 296
Query: 361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
                         ++I    +D  + E+  IS+EAK+ I +LL+K+   R+SA+  LKH
Sbjct: 297 -------------LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343
Query: 421 PWIS 424
           PW+S
Sbjct: 344 PWLS 347

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E L +     I HRD+KP  +L    +  +PVKL  F  G  I+   S        +   
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF--GVAIQLGES------GLVAGG 194
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            VG+  FMAPE+V      +   Y K  D+W  GV+++ILL G  PFYG           
Sbjct: 195 RVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT---------- 238
Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 +E LF  I +G Y     +WS IS+ AKDL+RR+L+ D  +R++    L HPW+
Sbjct: 239 ------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
Query: 424 ST----AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
                 A   H P    Q +R+  + R+L     +A+S+++
Sbjct: 293 KERDRYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 332

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E L +     I HRD+KP  +L    +  +PVKL  F  G  I+   S        +   
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF--GVAIQLGES------GLVAGG 192
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            VG+  FMAPE+V      +   Y K  D+W  GV+++ILL G  PFYG           
Sbjct: 193 RVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT---------- 236
Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 +E LF  I +G Y     +WS IS+ AKDL+RR+L+ D  +R++    L HPW+
Sbjct: 237 ------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 424 ST----AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
                 A   H P    Q +R+  + R+L     +A+S+++
Sbjct: 291 KERDRYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 330

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 107/218 (49%), Gaps = 36/218 (16%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCH----ACQEILFHSIQQGIAHRDLKPENILC 266
           V++   L G   F     ED      E  +    AC E L H  +  I H D+KPENI+C
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC-EGLKHMHEHSIVHLDIKPENIMC 182
Query: 267 VHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG 326
               + S VK+ DF L + +  +  V    AT         AEF APEIV+     E  G
Sbjct: 183 -ETKKASSVKIIDFGLATKLNPDEIVKVTTAT---------AEFAAPEIVDR----EPVG 228
Query: 327 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPE 386
           +    D+W++GV+ Y+LL G  PF    GED      ET          ++++  ++F E
Sbjct: 229 F--YTDMWAIGVLGYVLLSGLSPF---AGED----DLET--------LQNVKRCDWEFDE 271
Query: 387 GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             +S++S EAKD I+ LL K+ RKRL+    L+HPW+ 
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            I HRDLKPENIL    D    ++L DF     ++    +     TP          ++A
Sbjct: 220 NIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTP---------GYLA 267
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+   M     GY K  DLW+ GV+++ LL G PPF+               H  Q +
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW---------------HRRQIL 312
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +   I +G Y F   EW   S   KDLI RLL  D   RL+A   L+HP+ 
Sbjct: 313 MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 84/182 (46%), Gaps = 38/182 (20%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           FHS  Q + H+DLKPENIL       SP+K+ DF L     F +  HS  A        G
Sbjct: 140 FHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE--LFKSDEHSTNAA-------G 188
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +A +MAPE+              +CD+WS GVV+Y LL G  PF G   E+         
Sbjct: 189 TALYMAPEVFK-------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ------- 234
Query: 367 HACQEILFHSIQQGHYDFPE--GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
                      Q+  Y  P    E   ++ +A DL++++L KD  +R SAA VL H W  
Sbjct: 235 -----------QKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
Query: 425 TA 426
            A
Sbjct: 284 QA 285

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 133 VIHRDIKPENLLLGSNGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 179
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF                H  QE  
Sbjct: 180 EMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPF--------------EAHTYQET- 218
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +  I +  + FP+     +++ A+DLI RLL  +A +RL+ A VL+HPWI 
Sbjct: 219 YRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P  +    T  G+ +++ P
Sbjct: 133 VIHRDIKPENLLLGSNGEL---KIADF--------GWSVHAP--SSRRDTLCGTLDYLPP 179
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF                H  QE  
Sbjct: 180 EMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPF--------------EAHTYQET- 218
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +  I +  + FP+     +++ A+DLI RLL  +A +RL+ A VL+HPWI 
Sbjct: 219 YRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCV 267
           V++Y  + G   F     E       E     +++   L H  +    H DLKPENI+  
Sbjct: 124 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 183
Query: 268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
              + + +KL DF L + +    SV             G+AEF APE+       +  GY
Sbjct: 184 -TKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG----KPVGY 229
Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
               D+WS+GV+ YILL G  PF G   ++                  +++   ++  + 
Sbjct: 230 --YTDMWSVGVLSYILLSGLSPFGGENDDET---------------LRNVKSCDWNMDDS 272
Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTP 436
            +S IS++ KD IR+LL+ D   R++    L+HPW++      R    P
Sbjct: 273 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 85.5 bits (210), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCV 267
           V++Y  + G   F     E       E     +++   L H  +    H DLKPENI+  
Sbjct: 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289
Query: 268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
              + + +KL DF L + +    SV             G+AEF APE+       +  GY
Sbjct: 290 -TKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG----KPVGY 335
Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
               D+WS+GV+ YILL G  PF G   ++                  +++   ++  + 
Sbjct: 336 --YTDMWSVGVLSYILLSGLSPFGGENDDET---------------LRNVKSCDWNMDDS 378
Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTP 436
            +S IS++ KD IR+LL+ D   R++    L+HPW++      R    P
Sbjct: 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 41/190 (21%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           + C A Q    HS    I H D++PENI+     + S +K+ +F     +K       P 
Sbjct: 110 QVCEALQ--FLHS--HNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLK-------PG 157
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD---KRCDLWSLGVVVYILLCGYPPFYGN 353
               LL       F APE    +  PE   +D      D+WSLG +VY+LL G  PF   
Sbjct: 158 DNFRLL-------FTAPE----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
             +                +  +I    Y F E  +  IS EA D + RLLVK+ + R++
Sbjct: 207 TNQQ---------------IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT 251
Query: 414 AASVLKHPWI 423
           A+  L+HPW+
Sbjct: 252 ASEALQHPWL 261

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 36/176 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q  I H DLKP+NIL      L  +K+ DF +   I     +   + TP         E+
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP---------EY 199
Query: 311 MAPEIVNAFMGPEASGYD---KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
           +APEI+N         YD      D+W++G++ Y+LL    PF G   ++          
Sbjct: 200 LAPEILN---------YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--------- 241
Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 + +I Q + D+ E  +S++S  A D I+ LLVK+  KR +A   L H W+
Sbjct: 242 ------YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 38/177 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++
Sbjct: 127 KKVIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYL 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
            PE++   M      +D++ DLWSLGV+ Y  L G PPF  N  +D              
Sbjct: 174 PPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT------------- 214
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
             +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 215 --YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXLX--GTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 155 VIHRDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPP 201
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 202 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 240
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 241 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVGSAE 309
            QGI HRD+KPEN L    ++   +KL DF L     K N   +  + T       G+  
Sbjct: 186 NQGICHRDIKPENFL-FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK-----AGTPY 239
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APE++N         Y  +CD WS GV++++LL G  PF G    D   Q        
Sbjct: 240 FVAPEVLNT----TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ-------- 287
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
                  +      F    ++ +S  A+DL+  LL ++  +R  A   L+HPWIS
Sbjct: 288 -------VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 146 VIHRDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPP 192
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 193 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 231
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 232 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 282

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 131 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPP 177
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 178 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 216
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 217 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 133 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 179
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 180 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 218
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+
Sbjct: 219 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 265

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+ 
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P  +    T  G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAP--SSRRTTLCGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTXL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+ 
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 128 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 174
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 175 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 213
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+
Sbjct: 214 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 260

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+ 
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P  +    T  G+ +++ P
Sbjct: 126 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAP--SSRRTTLCGTLDYLPP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 173 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 211
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+
Sbjct: 212 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 258

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTEL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+ 
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          S H+P +    L+  G+ +++ P
Sbjct: 130 VIHRDIKPENLLLGSAGEL---KIADF--------GWSCHAPSSRRTTLS--GTLDYLPP 176
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 177 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+
Sbjct: 216 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +      E   +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 181 EXI------EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSS 270

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 130 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDTL--CGTLDYLPP 176
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 177 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 216 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 130 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 176
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 177 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 216 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 155 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDDL--CGTLDYLPP 201
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 202 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 240
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 241 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ +F          SVH+P +    L   G+ +++ P
Sbjct: 131 VIHRDIKPENLLLGSAGEL---KIANFGW--------SVHAPSSRRTTL--CGTLDYLPP 177
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 178 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 216
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 217 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ +F          SVH+P +    L   G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIANF--------GWSVHAPSSRRTTL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                  T  G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WTLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF L   +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KPEN+L     +L   K+ DF          SVH+P +    L   G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDDL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++   M      +D++ DLWSLGV+ Y  L G PPF  N  ++                
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
           +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+   +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 132 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 181
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                  T  G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 182 ------WTLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 225
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 226 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 269
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 270 LKDGVNDIKNHKWFATT 286

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +K+ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +K+ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +K+ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +K+ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 93/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AVKIIDK  L   S  ++F+EV        HP
Sbjct: 16  YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
           NI++L E  E ++                    H R K                      
Sbjct: 74  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F            L T  GS  + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +   F            L T  GS  +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
             L   + +G Y  P      +S + ++L+++ L+ +  KR +   ++K  W++      
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
             +P V P
Sbjct: 275 ELKPYVAP 282

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT----- 216
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                  T  G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 217 ------WTLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 260
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 261 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 305 LKNGVNDIKNHKWFATT 321

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 93/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AVKIIDK  L   S  ++F+EV        HP
Sbjct: 16  YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
           NI++L E  E ++                    H R K                      
Sbjct: 74  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F            L T  GS  + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +   F            L T  GS  +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
             L   + +G Y  P      +S + ++L+++ L+ +  KR +   ++K  W++      
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
             +P V P
Sbjct: 275 ELKPYVEP 282

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLAGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 90/193 (46%), Gaps = 44/193 (22%)
Query: 239 CHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           C    EI   L H  Q+GI +RDLKPENI+  H      VKL DF L        S+H  
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL-----CKESIHDG 175
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
             T    T  G+ E+MAPEI+        SG+++  D WSLG ++Y +L G PPF G   
Sbjct: 176 TVTH---TFCGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGE-- 224
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-- 413
                 R +T           I +   + P      ++ EA+DL+++LL ++A  RL   
Sbjct: 225 -----NRKKT--------IDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267
Query: 414 ---AASVLKHPWI 423
              A  V  HP+ 
Sbjct: 268 PGDAGEVQAHPFF 280

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLXGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +K+ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +++ DF L   +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 93/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AV+IIDK  L   S  ++F+EV        HP
Sbjct: 16  YRLLKTI-GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
           NI++L E  E ++                    H R K                      
Sbjct: 74  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F            L T  GS  + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +   F            L T  GS  +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
             L   + +G Y  P      +S + ++L+++ L+ +  KR +   ++K  W++      
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
             +P V P
Sbjct: 275 ELKPYVEP 282

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIXNHKWFATT 301

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 89/193 (46%), Gaps = 44/193 (22%)
Query: 239 CHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           C    EI   L H  Q+GI +RDLKPENI+  H      VKL DF L        S+H  
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL-----CKESIHDG 175
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
             T       G+ E+MAPEI+        SG+++  D WSLG ++Y +L G PPF G   
Sbjct: 176 TVTHXF---CGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGE-- 224
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-- 413
                 R +T           I +   + P      ++ EA+DL+++LL ++A  RL   
Sbjct: 225 -----NRKKT--------IDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267
Query: 414 ---AASVLKHPWI 423
              A  V  HP+ 
Sbjct: 268 PGDAGEVQAHPFF 280

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYQMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AVKIIDK  L   S  ++F+EV        HP
Sbjct: 9   YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 66
Query: 107 NIIQLLEYYEDDEN-----------------------HERHKR----------------- 126
           NI++L E  E ++                         E+  R                 
Sbjct: 67  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F   +          T  GS  + AP
Sbjct: 127 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLD---------TFCGSPPYAAP 174
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G     D+WSLGV++Y L+ G  PF G
Sbjct: 175 EL---FQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDG 208

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 232 GWQRGETCHACQEILFHSIQ----QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK 287
           GW + +   A    +  ++Q    + I HRDLK EN+L    D    +K+ DF   +   
Sbjct: 101 GWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFT 157
Query: 288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
           F   +          T  GS  + APE+   F G +  G     D+WSLGV++Y L+ G 
Sbjct: 158 FGNKLD---------TFCGSPPYAAPEL---FQGKKYDG--PEVDVWSLGVILYTLVSGS 203
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF G   ++               L   + +G Y  P      +S + ++L+++ L+ +
Sbjct: 204 LPFDGQNLKE---------------LRERVLRGKYRIP----FYMSTDCENLLKKFLILN 244
Query: 408 ARKRLSAASVLKHPWISTA--GTAHRPLVTP 436
             KR +   ++K  W++        +P V P
Sbjct: 245 PSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 275

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 216
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 217 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 260
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 261 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 305 LKNGVNDIKNHKWFATT 321

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LPNGVNDIKNHKWFATT 300

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 216
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 217 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 260
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 261 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 305 LKNGVNDIKNHKWFATT 321

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 285 LKNGVNDIKNHKWFATT 301

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKDGVNDIKNHKWFATT 300

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKDGVNDIKNHKWFATT 300

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKDGVNDIKNHKWFATT 300

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKDGVNDIKNHKWFATT 300

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 139 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 188
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 189 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 232
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 233 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 276
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 277 LKNGVNDIKNHKWFATT 293

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 141 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 190
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 191 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 234
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 235 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 278
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 279 LKNGVNDIKNHKWFATT 295

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 95/220 (43%), Gaps = 61/220 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E A+KIIDK  L   S  ++F+EV        HP
Sbjct: 14  YRLLKTI-GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHP 71
Query: 107 NIIQLLEYYEDDEN-------------------HER---------------------HKR 126
           NI++L E  E ++                    H R                      KR
Sbjct: 72  NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF    G     +V   L T       GS  + AP
Sbjct: 132 IVHRDLKAENLLL---DADMNIKIADF----GFSNEFTVGGKLDTF-----CGSPPYAAP 179
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G 
Sbjct: 180 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQ 214

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF    G     +V   L T       GS  +
Sbjct: 129 QKRIVHRDLKAENLLL---DADMNIKIADF----GFSNEFTVGGKLDTF-----CGSPPY 176
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 177 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 218
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
             L   + +G Y  P      +S + ++L++R LV +  KR +   ++K  WI+      
Sbjct: 219 --LRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEED 272
Query: 431 --RPLVTPQV 438
             +P V P++
Sbjct: 273 ELKPFVEPEL 282

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 139 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 188
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 189 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 232
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 233 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 276
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 277 LKNGVNDIKNHKWFATT 293

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AVKIIDK  L   S  ++F+EV        HP
Sbjct: 16  YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
           NI++L E  E ++                    H R K                      
Sbjct: 74  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F   + +    P          + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAP---------PYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +   F   + +    P          +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAP---------PY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
             L   + +G Y  P      +S + ++L+++ L+ +  KR +   ++K  W++      
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
             +P V P
Sbjct: 275 ELKPYVEP 282

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 50/196 (25%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+ +  
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-- 241
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL--- 412
                         Q  ++  I  G   FP    S  S + KDL+R LL  D  KR    
Sbjct: 242 -----------EPIQ--IYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNL 284
Query: 413 --SAASVLKHPWISTA 426
                 +  H W +T 
Sbjct: 285 KNGVNDIKNHKWFATT 300

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN++    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLII---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+ +       GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEIIIS------KGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN G               
Sbjct: 202 SPELLT-----EKSA-XKSSDLWALGCIIYQLVAGLPPFRAGNEG--------------- 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 241 -LIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 89/216 (41%), Gaps = 64/216 (29%)
Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQ-GHPNI 108
           G +LGKG++A V    +I T LE A+K+IDK   +      RV  EV+   HCQ  HP+I
Sbjct: 16  GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI--HCQLKHPSI 73
Query: 109 IQLLEYYED---------------------------DENHERH--------------KRI 127
           ++L  Y+ED                            EN  RH                I
Sbjct: 74  LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDL   N+L         +K+ DF L + +K     H  L         G+  +++PE
Sbjct: 134 LHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLC--------GTPNYISPE 182
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           I         S +    D+WSLG + Y LL G PPF
Sbjct: 183 IAT------RSAHGLESDVWSLGCMFYTLLIGRPPF 212

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 43/197 (21%)
Query: 233 WQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK 287
           +   E  H   +I+      HS   GI HRDL   N+L         +K+ DF L + +K
Sbjct: 109 FSENEARHFMHQIITGMLYLHS--HGILHRDLTLSNLLLTRNMN---IKIADFGLATQLK 163
Query: 288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
                H  L         G+  +++PEI         S +    D+WSLG + Y LL G 
Sbjct: 164 MPHEKHYTLC--------GTPNYISPEIATR------SAHGLESDVWSLGCMFYTLLIGR 209
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
           PPF  +  ++                 + +    Y+ P    S +S EAKDLI +LL ++
Sbjct: 210 PPFDTDTVKNT---------------LNKVVLADYEMP----SFLSIEAKDLIHQLLRRN 250
Query: 408 ARKRLSAASVLKHPWIS 424
              RLS +SVL HP++S
Sbjct: 251 PADRLSLSSVLDHPFMS 267

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AVKIIDK  L   S  ++F+EV        HP
Sbjct: 16  YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IXKVLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
           NI++L E  E ++                    H R K                      
Sbjct: 74  NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F   + +    P          + AP
Sbjct: 134 IVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAP---------PYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +   F   + +    P          +
Sbjct: 131 QKFIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAP---------PY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
             L   + +G Y  P       S + ++L+++ L+ +  KR +   + K  W +      
Sbjct: 221 --LRERVLRGKYRIP----FYXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDD 274
Query: 429 AHRPLVTP 436
             +P V P
Sbjct: 275 ELKPYVEP 282

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 202 SPELLT-----EKSA-SKSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    D+   +++ DF     +K  T     
Sbjct: 133 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DEQGYIQVTDFGFAKRVKGRT----- 182
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 183 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 226
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 227 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 270
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 271 LKNGVNDIKNHKWFATT 287

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E AV+IIDK  L   S  ++F+EV        HP
Sbjct: 16  YRLLKTI-GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
           NI++L E  E ++                    H R K                      
Sbjct: 74  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +   F   +             GS  + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEF---------CGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +   F   +             GS  +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEF---------CGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
             L   + +G Y  P      +S + ++L+++ L+ +  KR +   ++K  W++      
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
             +P V P
Sbjct: 275 ELKPYVEP 282

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 86/197 (43%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E +APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEALAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 95/219 (43%), Gaps = 61/219 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL+  I GKG +A V+   ++LT  E AVKIIDK  L   S  ++F+EV        HP
Sbjct: 17  YRLQKTI-GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK-ILNHP 74
Query: 107 NIIQLLEYYEDDEN-------------------HER---------------------HKR 126
           NI++L E  E ++                    H R                      K 
Sbjct: 75  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF    G     +V + L T       GS  + AP
Sbjct: 135 IVHRDLKAENLLL---DGDMNIKIADF----GFSNEFTVGNKLDTF-----CGSPPYAAP 182
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+   F G +  G     D+WSLGV++Y L+ G  PF G
Sbjct: 183 EL---FQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDG 216

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF    G     +V + L T       GS  +
Sbjct: 132 QKYIVHRDLKAENLLL---DGDMNIKIADF----GFSNEFTVGNKLDTF-----CGSPPY 179
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            APE+   F G +  G     D+WSLGV++Y L+ G  PF G
Sbjct: 180 AAPEL---FQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDG 216

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN G               
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEG--------------- 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 241 -LIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++AP I+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPAII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  KR   
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYV 198
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 199 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 236
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 237 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANAF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYV 202
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 203 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 241 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 92/220 (41%), Gaps = 61/220 (27%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL   I GKG +A V+   +ILT  E A+KIIDK  L   S  ++F+EV        HP
Sbjct: 17  YRLLKTI-GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHP 74
Query: 107 NIIQLLEYYEDDEN-------------------HER---------------------HKR 126
           NI++L E  E ++                    H R                      KR
Sbjct: 75  NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +       + +    P          + AP
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAP---------PYAAP 182
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E+   F G +  G +   D+WSLGV++Y L+ G  PF G 
Sbjct: 183 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQ 217

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q+ I HRDLK EN+L    D    +K+ DF   +       + +    P          +
Sbjct: 132 QKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAP---------PY 179
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+   F G +  G +   D+WSLGV++Y L+ G  PF G   ++             
Sbjct: 180 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 221
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
             L   + +G Y  P      +S + ++L++R LV +  KR +   ++K  WI+      
Sbjct: 222 --LRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEED 275
Query: 431 --RPLVTPQV 438
             +P V P++
Sbjct: 276 ELKPFVEPEL 285

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           +A Q +L     HS+   + +RDLKPEN+L    DQ   +++ DF     +K  T     
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+ E++APEI+       + GY+K  D W+LGV++Y +  GYPPF+    
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
                       A Q I ++  I  G   FP    S  S + KDL+R LL  D  K    
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKAFGN 283
Query: 413 ---SAASVLKHPWISTA 426
                  +  H W +T 
Sbjct: 284 LKNGVNDIKNHKWFATT 300

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 129 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 179
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 180 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 217
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 218 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 255

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 126 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 176
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 177 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 214
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 215 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 252

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 198
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 199 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 236
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 237 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 202
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 203 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 241 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 133 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 183
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 184 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 221
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 222 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 259

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 178 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 215
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 216 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 253

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 156 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 206
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 207 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 244
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 245 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 282

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 128 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 178
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 179 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 216
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 217 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 254

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFPE  +     +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 48/194 (24%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
            E C A + +  HS  + I +RDLKPENIL    D+   +K+ DF            + P
Sbjct: 113 AEVCLALEYL--HS--KDIIYRDLKPENILL---DKNGHIKITDFGFAK--------YVP 157
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
             T  L    G+ +++APE+V+         Y+K  D WS G+++Y +L GY PFY +  
Sbjct: 158 DVTYXL---CGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDS-- 206
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL--- 412
                    T    ++IL   ++     FP       +++ KDL+ RL+ +D  +RL   
Sbjct: 207 --------NTMKTYEKILNAELR-----FP----PFFNEDVKDLLSRLITRDLSQRLGNL 249
Query: 413 --SAASVLKHPWIS 424
                 V  HPW  
Sbjct: 250 QNGTEDVKNHPWFK 263

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           +GI HRDLKPENIL    ++   +++ DF  G+    +       A       VG+A+++
Sbjct: 154 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 204
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
           +PE++      E S   K  DLW+LG ++Y L+ G PPF  GN                +
Sbjct: 205 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 242
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
            ++F  I +  YDFP    +    +A+DL+ +LLV DA KRL
Sbjct: 243 YLIFQKIIKLEYDFP----AAFFPKARDLVEKLLVLDATKRL 280

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 33/175 (18%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF--NTSVHSPLATPLLLTPVGSAEFMA 312
            HRD+KP+NIL    D    ++L DF  GS +K   + +V S +A       VG+ ++++
Sbjct: 197 VHRDIKPDNILM---DMNGHIRLADF--GSCLKLMEDGTVQSSVA-------VGTPDYIS 244
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+ A  G +   Y   CD WSLGV +Y +L G  PFY                   +I
Sbjct: 245 PEILQAMEGGKGR-YGPECDWWSLGVCMYEMLYGETPFYAES----------LVETYGKI 293
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV---LKHPWIS 424
           + H   +  + FP  + + +S+ AKDLIRRL+      RL    +    KHP+ S
Sbjct: 294 MNH---KERFQFPT-QVTDVSENAKDLIRRLICS-REHRLGQNGIEDFKKHPFFS 343

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPEN+L    D L+ VK+ DF L S I  + +         L T  GS  +
Sbjct: 126 RHKIVHRDLKPENLLL--DDNLN-VKIADFGL-SNIMTDGN--------FLKTSCGSPNY 173
Query: 311 MAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            APE++N   + GPE        D+WS G+V+Y++L G  PF      +           
Sbjct: 174 AAPEVINGKLYAGPE-------VDVWSCGIVLYVMLVGRLPFDDEFIPN----------- 215
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
               LF  +    Y  P+     +S  A+ LIRR++V D  +R++   + + PW + 
Sbjct: 216 ----LFKKVNSCVYVMPD----FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L     QG+ HRD+K ++IL  H  +   VKL DF    G     S  
Sbjct: 248 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 300
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            P    L    VG+  +MAPE+++    GPE        D+WSLG++V  ++ G PP++ 
Sbjct: 301 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 349
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                      +     ++ L   ++  H          +S   K  + RLLV+D  +R 
Sbjct: 350 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 393
Query: 413 SAASVLKHPWISTAG 427
           +AA +LKHP+++ AG
Sbjct: 394 TAAELLKHPFLAKAG 408

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L     QG+ HRD+K ++IL  H  +   VKL DF    G     S  
Sbjct: 126 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 178
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            P    L    VG+  +MAPE+++    GPE        D+WSLG++V  ++ G PP++ 
Sbjct: 179 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 227
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                      +     ++ L   ++  H          +S   K  + RLLV+D  +R 
Sbjct: 228 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 271
Query: 413 SAASVLKHPWISTAG 427
           +AA +LKHP+++ AG
Sbjct: 272 TAAELLKHPFLAKAG 286

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L     QG+ HRD+K ++IL  H  +   VKL DF    G     S  
Sbjct: 128 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 180
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            P    L    VG+  +MAPE+++    GPE        D+WSLG++V  ++ G PP++ 
Sbjct: 181 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 229
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                      +     ++ L   ++  H          +S   K  + RLLV+D  +R 
Sbjct: 230 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 273
Query: 413 SAASVLKHPWISTAG 427
           +AA +LKHP+++ AG
Sbjct: 274 TAAELLKHPFLAKAG 288

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L     QG+ HRD+K ++IL  H  +   VKL DF    G     S  
Sbjct: 171 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 223
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            P    L    VG+  +MAPE+++    GPE        D+WSLG++V  ++ G PP++ 
Sbjct: 224 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 272
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                      +     ++ L   ++  H          +S   K  + RLLV+D  +R 
Sbjct: 273 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 316
Query: 413 SAASVLKHPWISTAG 427
           +AA +LKHP+++ AG
Sbjct: 317 TAAELLKHPFLAKAG 331

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 38/212 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L     QG+ HRD+K ++IL  H  +   VKL DF    G     S  
Sbjct: 117 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 169
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            P    L    VG+  +MAPE+++    GPE        D+WSLG++V  ++ G PP++ 
Sbjct: 170 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 218
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                      +     ++ L   ++  H          +S   K  + RLLV+D  +R 
Sbjct: 219 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 262
Query: 413 SAASVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
           +AA +LKHP+++ AG    P     ++R+N++
Sbjct: 263 TAAELLKHPFLAKAGP---PASIVPLMRQNRT 291

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 38/212 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L     QG+ HRD+K ++IL  H  +   VKL DF    G     S  
Sbjct: 121 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 173
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            P    L    VG+  +MAPE+++    GPE        D+WSLG++V  ++ G PP++ 
Sbjct: 174 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 222
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                      +     ++ L   ++  H          +S   K  + RLLV+D  +R 
Sbjct: 223 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 266
Query: 413 SAASVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
           +AA +LKHP+++ AG    P     ++R+N++
Sbjct: 267 TAAELLKHPFLAKAGP---PASIVPLMRQNRT 295

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 29/158 (18%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMA 312
            HRD+KP+N+L    D    ++L DF  GS +K N   +V S +A       VG+ ++++
Sbjct: 213 VHRDIKPDNVLL---DVNGHIRLADF--GSCLKMNDDGTVQSSVA-------VGTPDYIS 260
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+ A M      Y   CD WSLGV +Y +L G  PFY                   +I
Sbjct: 261 PEILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES----------LVETYGKI 309
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
           + H   +  + FP    + +S+EAKDLI+RL+    R+
Sbjct: 310 MNH---EERFQFP-SHVTDVSEEAKDLIQRLICSRERR 343

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 29/158 (18%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMA 312
            HRD+KP+N+L    D    ++L DF  GS +K N   +V S +A       VG+ ++++
Sbjct: 197 VHRDIKPDNVLL---DVNGHIRLADF--GSCLKMNDDGTVQSSVA-------VGTPDYIS 244
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+ A M      Y   CD WSLGV +Y +L G  PFY                   +I
Sbjct: 245 PEILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES----------LVETYGKI 293
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
           + H   +  + FP    + +S+EAKDLI+RL+    R+
Sbjct: 294 MNH---EERFQFP-SHVTDVSEEAKDLIQRLICSRERR 327

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++ +   TP         E
Sbjct: 270 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP---------E 317
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APE++      E + Y +  D W LGVV+Y ++CG  PFY               +  
Sbjct: 318 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---------------NQD 356
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            E LF  I      FP     T+  EAK L+  LL KD ++RL   S
Sbjct: 357 HEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGS 399

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++ +   TP         E
Sbjct: 267 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP---------E 314
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APE++      E + Y +  D W LGVV+Y ++CG  PFY               +  
Sbjct: 315 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---------------NQD 353
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            E LF  I      FP     T+  EAK L+  LL KD ++RL   S
Sbjct: 354 HEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGS 396

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPEN+L    D+   VK+ DF L S I  + +         L T  GS  +
Sbjct: 130 RHKIVHRDLKPENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNY 177
Query: 311 MAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            APE+++   + GPE        D+WS GV++Y++LC   PF     +D           
Sbjct: 178 AAPEVISGKLYAGPE-------VDVWSCGVILYVMLCRRLPF-----DD----------E 215
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
              +LF +I  G Y  P+     +S  A  LI+R+L+ +   R+S   +++  W   
Sbjct: 216 SIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPEN+L    D+   VK+ DF L S I  + +         L T  GS  +
Sbjct: 131 RHKIVHRDLKPENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNY 178
Query: 311 MAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            APE+++   + GPE        D+WS GV++Y++LC   PF     +D           
Sbjct: 179 AAPEVISGKLYAGPE-------VDVWSCGVILYVMLCRRLPF-----DD----------E 216
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
              +LF +I  G Y  P+     +S  A  LI+R+L+ +   R+S   +++  W   
Sbjct: 217 SIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 269

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 48/213 (22%)
Query: 223 FYGNCGEDCGWQRGETCHACQEILFHSI--------QQGIAHRDLKPENILCVHPDQLSP 274
           + GN   D   QR +         F  I        +  I HRDLKPEN+L    D+   
Sbjct: 85  YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLN 141
Query: 275 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA--FMGPEASGYDKRCD 332
           VK+ DF L S I  + +         L T  GS  + APE+++   + GPE        D
Sbjct: 142 VKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPE-------VD 185
Query: 333 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI 392
           +WS GV++Y++LC   PF     +D              +LF +I  G Y  P+     +
Sbjct: 186 VWSCGVILYVMLCRRLPF-----DD----------ESIPVLFKNISNGVYTLPK----FL 226
Query: 393 SDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
           S  A  LI+R+L+ +   R+S   +++  W   
Sbjct: 227 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 259

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 48/213 (22%)
Query: 223 FYGNCGEDCGWQRGETCHACQEILFHSI--------QQGIAHRDLKPENILCVHPDQLSP 274
           + GN   D   QR +         F  I        +  I HRDLKPEN+L    D+   
Sbjct: 89  YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLN 145
Query: 275 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA--FMGPEASGYDKRCD 332
           VK+ DF L S I  + +         L T  GS  + APE+++   + GPE        D
Sbjct: 146 VKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPE-------VD 189
Query: 333 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI 392
           +WS GV++Y++LC   PF     +D              +LF +I  G Y  P+     +
Sbjct: 190 VWSCGVILYVMLCRRLPF-----DD----------ESIPVLFKNISNGVYTLPK----FL 230
Query: 393 SDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
           S  A  LI+R+L+ +   R+S   +++  W   
Sbjct: 231 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 263

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++     TP         E
Sbjct: 129 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP---------E 176
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APE++      E + Y +  D W LGVV+Y ++CG  PFY                  
Sbjct: 177 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------D 215
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            E LF  I      FP     T+  EAK L+  LL KD ++RL   S
Sbjct: 216 HEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGS 258

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++     TP         E
Sbjct: 128 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP---------E 175
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APE++      E + Y +  D W LGVV+Y ++CG  PFY                  
Sbjct: 176 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------D 214
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            E LF  I      FP     T+  EAK L+  LL KD ++RL   S
Sbjct: 215 HEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGS 257

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++     TP         E
Sbjct: 127 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP---------E 174
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APE++      E + Y +  D W LGVV+Y ++CG  PFY                  
Sbjct: 175 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------D 213
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
            E LF  I      FP     T+  EAK L+  LL KD ++RL   S
Sbjct: 214 HEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGS 256

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 33/176 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLA 297
             ACQ + F S Q GI HRD+KP NI+       + VK+ DF +   I     SV    A
Sbjct: 123 ADACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                  +G+A++++PE             D R D++SLG V+Y +L G PPF G+  + 
Sbjct: 179 V------IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS 226
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
             +Q           R E   A    ++  ++ +     PE  + T ++   DL+R
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
           ++G  LGKG +A      ++ T+  +A K++ K   L  H + ++  E+   H    +P+
Sbjct: 45  MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 103
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
           ++    ++EDD                E H+R K                        R+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++APE
Sbjct: 164 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKTLC--------GTPNYIAPE 212
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           ++         G+    D+WSLG ++Y LL G PPF  +C
Sbjct: 213 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 246

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++AP
Sbjct: 163 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKTLC--------GTPNYIAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++         G+    D+WSLG ++Y LL G PPF  +C ++                
Sbjct: 212 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 250
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +  I++  Y  P      I+  A  LIRR+L  D   R S A +L   + ++     R
Sbjct: 251 YIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
           ++G  LGKG +A      ++ T+  +A K++ K   L  H + ++  E+   H    +P+
Sbjct: 45  MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 103
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
           ++    ++EDD                E H+R K                        R+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++APE
Sbjct: 164 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKXLC--------GTPNYIAPE 212
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           ++         G+    D+WSLG ++Y LL G PPF  +C
Sbjct: 213 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 246

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++AP
Sbjct: 163 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKXLC--------GTPNYIAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++         G+    D+WSLG ++Y LL G PPF  +C ++                
Sbjct: 212 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 250
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +  I++  Y  P      I+  A  LIRR+L  D   R S A +L   + ++     R
Sbjct: 251 YIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
           ++G  LGKG +A      ++ T+  +A K++ K   L  H + ++  E+   H    +P+
Sbjct: 45  MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 103
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
           ++    ++EDD                E H+R K                        R+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++APE
Sbjct: 164 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAPE 212
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           ++         G+    D+WSLG ++Y LL G PPF  +C
Sbjct: 213 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 246

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++AP
Sbjct: 163 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++         G+    D+WSLG ++Y LL G PPF  +C ++                
Sbjct: 212 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 250
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +  I++  Y  P      I+  A  LIRR+L  D   R S A +L   + ++     R
Sbjct: 251 YIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 29/167 (17%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  + GI +RD+K ENIL    D    V L DF L      +        T       
Sbjct: 172 LEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVAD-------ETERAYDFC 221
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E+MAP+IV        SG+DK  D WSLGV++Y LL G  PF  +  ++        
Sbjct: 222 GTIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-------- 269
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
               Q  +   I +    +P+     +S  AKDLI+RLL+KD +KRL
Sbjct: 270 ---SQAEISRRILKSEPPYPQ----EMSALAKDLIQRLLMKDPKKRL 309

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51  LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
           ++G  LGKG +A      ++ T+  +A K++ K   L  H + ++  E+   H    +P+
Sbjct: 29  MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 87
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
           ++    ++EDD                E H+R K                        R+
Sbjct: 88  VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 147
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++APE
Sbjct: 148 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAPE 196
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           ++         G+    D+WSLG ++Y LL G PPF  +C
Sbjct: 197 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 230

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLK  N+     D +  VK+ DF L + I+F+      L         G+  ++AP
Sbjct: 147 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAP 195
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E++         G+    D+WSLG ++Y LL G PPF  +C ++                
Sbjct: 196 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 234
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
           +  I++  Y  P      I+  A  LIRR+L  D   R S A +L   + ++     R
Sbjct: 235 YIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 288

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 33/176 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLA 297
             ACQ + F S Q GI HRD+KP NIL       + VK+ DF +   I     SV    A
Sbjct: 123 ADACQALNF-SHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                  +G+A++++PE             D R D++SLG V+Y +L G PPF G+    
Sbjct: 179 V------IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
             +Q           R E   A    ++  ++ +     PE  + T ++   DL+R
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
           ED  +   E   A   +  HS+  GI +RDLKPENIL    D+   +KL DF    G+  
Sbjct: 126 EDVKFYLAELALALDHL--HSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSK 174
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            +  H   A        G+ E+MAPE+VN        G+ +  D WS GV+++ +L G  
Sbjct: 175 ESIDHEKKAYSF----CGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTL 224
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
           PF G         R ET           I +     P+     +S EA+ L+R L  ++ 
Sbjct: 225 PFQGK-------DRKETMTM--------ILKAKLGMPQ----FLSPEAQSLLRMLFKRNP 265
Query: 409 RKRLSAA-----SVLKHPWIST 425
             RL A       + +H + ST
Sbjct: 266 ANRLGAGPDGVEEIKRHSFFST 287

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
           ED  +   E   A   +  HS+  GI +RDLKPENIL    D+   +KL DF    G+  
Sbjct: 127 EDVKFYLAELALALDHL--HSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSK 175
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            +  H   A        G+ E+MAPE+VN        G+ +  D WS GV+++ +L G  
Sbjct: 176 ESIDHEKKAYSF----CGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTL 225
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
           PF G         R ET           I +     P+     +S EA+ L+R L  ++ 
Sbjct: 226 PFQGK-------DRKETMTM--------ILKAKLGMPQ----FLSPEAQSLLRMLFKRNP 266
Query: 409 RKRLSAA-----SVLKHPWIST 425
             RL A       + +H + ST
Sbjct: 267 ANRLGAGPDGVEEIKRHSFFST 288

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
           ED  +   E   A   +  HS+  GI +RDLKPENIL    D+   +KL DF    G+  
Sbjct: 126 EDVKFYLAELALALDHL--HSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSK 174
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            +  H   A        G+ E+MAPE+VN        G+ +  D WS GV+++ +L G  
Sbjct: 175 ESIDHEKKAYSF----CGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTL 224
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
           PF G         R ET           I +     P+     +S EA+ L+R L  ++ 
Sbjct: 225 PFQGK-------DRKETMTM--------ILKAKLGMPQ----FLSPEAQSLLRMLFKRNP 265
Query: 409 RKRLSAA-----SVLKHPWIST 425
             RL A       + +H + ST
Sbjct: 266 ANRLGAGPDGVEEIKRHSFFST 287

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATP 299
           ACQ + F S Q GI HRD+KP NI+       + VK+ DF +   I     SV    A  
Sbjct: 125 ACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV- 179
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                +G+A++++PE             D R D++SLG V+Y +L G PPF G+      
Sbjct: 180 -----IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
Query: 360 WQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
           +Q           R E   A    ++  ++ +     PE  + T ++   DL+R
Sbjct: 229 YQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 33/176 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLA 297
             ACQ + F S Q GI HRD+KP NI+       + VK+ DF +   I     SV    A
Sbjct: 123 ADACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                  +G+A++++PE             D R D++SLG V+Y +L G PPF G+    
Sbjct: 179 V------IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
             +Q           R E   A    ++  ++ +     PE  + T ++   DL+R
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATP 299
           ACQ + F S Q GI HRD+KP NI+       + VK+ DF +   I     SV    A  
Sbjct: 125 ACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV- 179
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                +G+A++++PE             D R D++SLG V+Y +L G PPF G+      
Sbjct: 180 -----IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
Query: 360 WQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
           +Q           R E   A    ++  ++ +     PE  + T ++   DL+R
Sbjct: 229 YQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 37/176 (21%)
Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATP 299
           ACQ + F S Q GI HRD+KP NI+       + VK+ DF +   I     SV    A  
Sbjct: 142 ACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV- 196
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASG--YDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                +G+A++++PE        +A G   D R D++SLG V+Y +L G PPF G+    
Sbjct: 197 -----IGTAQYLSPE--------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 243
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
             +Q           R E   A    ++  ++ +     PE  + T ++   DL+R
Sbjct: 244 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 295

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
            +  H C E       + + HRD+KPEN+L  +  +L   K+ DF          SVH+P
Sbjct: 125 ADALHYCHE-------RKVIHRDIKPENLLMGYKGEL---KIADF--------GWSVHAP 166
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                 +   G+ +++ PE++      E   +D++ DLW  GV+ Y  L G PPF     
Sbjct: 167 SLRRRXM--CGTLDYLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
            +                   I      FP      +SD +KDLI +LL     +RL   
Sbjct: 219 TET---------------HRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLK 259
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
            V++HPW+     A+   V P V +  QS
Sbjct: 260 GVMEHPWVK----ANSRRVLPPVYQSTQS 284

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
            +  H C E       + + HRD+KPEN+L  +  +L   K+ DF          SVH+P
Sbjct: 124 ADALHYCHE-------RKVIHRDIKPENLLMGYKGEL---KIADF--------GWSVHAP 165
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                 +   G+ +++ PE++      E   +D++ DLW  GV+ Y  L G PPF     
Sbjct: 166 SLRRRXM--CGTLDYLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
            +                   I      FP      +SD +KDLI +LL     +RL   
Sbjct: 218 TET---------------HRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLK 258
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
            V++HPW+     A+   V P V +  QS
Sbjct: 259 GVMEHPWVK----ANSRRVLPPVYQSTQS 283

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 83/193 (43%), Gaps = 40/193 (20%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
           T    + + +   + G+ HRD+KP NIL    D+   +KLCDF + SG   +       A
Sbjct: 130 TVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGI-SGRLVDDKAKDRSA 185
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                   G A +MAPE ++    P    YD R D+WSLG+ +  L  G  P Y NC  D
Sbjct: 186 --------GCAAYMAPERIDP-PDPTKPDYDIRADVWSLGISLVELATGQFP-YKNCKTD 235
Query: 358 CGWQRGETCHACQEILFHSIQQ------GHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                        E+L   +Q+      GH  F        S + +  ++  L KD RKR
Sbjct: 236 F------------EVLTKVLQEEPPLLPGHMGF--------SGDFQSFVKDCLTKDHRKR 275
Query: 412 LSAASVLKHPWIS 424
                +L+H +I 
Sbjct: 276 PKYNKLLEHSFIK 288

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP         E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY               +   
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---------------NQDH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP         E+
Sbjct: 127 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EY 174
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY                   
Sbjct: 175 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 213
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 214 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 269
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 270 INWQDVVQKKLLPPFKPQV 288

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP         E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY                   
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 50  RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
           R+K E      ++G+GA+  VQ   +  T   YA+K++ K      S S  F E      
Sbjct: 70  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
               P ++QL   ++DD                    N++  ++ A              
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
                 HRD+KP+N+L    D+   +KL DF  G+ +K N             T VG+ +
Sbjct: 190 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 239
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           +++PE++ +  G     Y + CD WS+GV +Y +L G  PFY + 
Sbjct: 240 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYADS 282

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 233 WQRGETCHACQEI-LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           W R  T      +   HS+  G  HRD+KP+N+L    D+   +KL DF  G+ +K N  
Sbjct: 174 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE 226
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                      T VG+ ++++PE++ +  G     Y + CD WS+GV +Y +L G  PFY
Sbjct: 227 -----GMVRCDTAVGTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFY 279
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
            +                 +I+ H   +    FP+   + IS EAK+LI
Sbjct: 280 ADS----------LVGTYSKIMNH---KNSLTFPDD--NDISKEAKNLI 313

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 50  RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
           R+K E      ++G+GA+  VQ   +  T   YA+K++ K      S S  F E      
Sbjct: 65  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
               P ++QL   ++DD                    N++  ++ A              
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
                 HRD+KP+N+L    D+   +KL DF  G+ +K N             T VG+ +
Sbjct: 185 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 234
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           +++PE++ +  G     Y + CD WS+GV +Y +L G  PFY + 
Sbjct: 235 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYADS 277

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 233 WQRGETCHACQEI-LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           W R  T      +   HS+  G  HRD+KP+N+L    D+   +KL DF  G+ +K N  
Sbjct: 169 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE 221
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                      T VG+ ++++PE++ +  G     Y + CD WS+GV +Y +L G  PFY
Sbjct: 222 -----GMVRCDTAVGTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFY 274
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
            +                 +I+ H   +    FP+   + IS EAK+LI
Sbjct: 275 ADS----------LVGTYSKIMNH---KNSLTFPDD--NDISKEAKNLI 308

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 50  RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
           R+K E      ++G+GA+  VQ   +  T   YA+K++ K      S S  F E      
Sbjct: 70  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
               P ++QL   ++DD                    N++  ++ A              
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
                 HRD+KP+N+L    D+   +KL DF  G+ +K N             T VG+ +
Sbjct: 190 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 239
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           +++PE++ +  G     Y + CD WS+GV +Y +L G  PFY + 
Sbjct: 240 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYADS 282

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 233 WQRGETCHACQEI-LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           W R  T      +   HS+  G  HRD+KP+N+L    D+   +KL DF  G+ +K N  
Sbjct: 174 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE 226
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                      T VG+ ++++PE++ +  G     Y + CD WS+GV +Y +L G  PFY
Sbjct: 227 -----GMVRCDTAVGTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFY 279
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
            +                 +I+ H   +    FP+   + IS EAK+LI
Sbjct: 280 ADS----------LVGTYSKIMNH---KNSLTFPDD--NDISKEAKNLI 313

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++     TP         E+
Sbjct: 129 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 176
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY                   
Sbjct: 177 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 215
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 216 ERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 271
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 272 INWQDVVQKKLLPPFKPQV 290

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++     TP         E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY                   
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 211 ERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++     TP         E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY                   
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + + +RD+K EN++    D+   +K+ DF L   GI    ++     TP         E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E + Y +  D W LGVV+Y ++CG  PFY                   
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
           E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H     
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
             W         P   PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 39/197 (19%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C A  + L +   QG+ HRD+K ++IL     +   VKL DF   + I  +    
Sbjct: 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKR 198
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
             L        VG+  +MAPE+++       S Y    D+WSLG++V  ++ G PP++ +
Sbjct: 199 KXL--------VGTPYWMAPEVISR------SLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWST---ISDEAKDLIRRLLVKDARK 410
                         A + +          D P  +      +S   +D + R+LV+D ++
Sbjct: 245 S----------PVQAMKRL---------RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 411 RLSAASVLKHPWISTAG 427
           R +A  +L HP++   G
Sbjct: 286 RATAQELLDHPFLLQTG 302

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 43/189 (22%)
Query: 238 TCHACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           T +A + IL     HS  +GI +RDLK +NIL    D+   +K+ DF +        +  
Sbjct: 122 TFYAAEIILGLQFLHS--KGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT 176
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
           +           G+ +++APEI+          Y+   D WS GV++Y +L G  PF+G 
Sbjct: 177 NEFC--------GTPDYIAPEIL------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
             E+               LFHSI+  +  +P   W  +  EAKDL+ +L V++  KRL 
Sbjct: 223 DEEE---------------LFHSIRMDNPFYP--RW--LEKEAKDLLVKLFVREPEKRLG 263
Query: 414 A-ASVLKHP 421
               + +HP
Sbjct: 264 VRGDIRQHP 272

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 43/189 (22%)
Query: 238 TCHACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           T +A + IL     HS  +GI +RDLK +NIL    D+   +K+ DF +           
Sbjct: 121 TFYAAEIILGLQFLHS--KGIVYRDLKLDNILL---DKDGHIKIADFGMCK--------E 167
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
           + L         G+ +++APEI+          Y+   D WS GV++Y +L G  PF+G 
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEIL------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
             E+               LFHSI+  +  +P   W  +  EAKDL+ +L V++  KRL 
Sbjct: 222 DEEE---------------LFHSIRMDNPFYP--RW--LEKEAKDLLVKLFVREPEKRLG 262
Query: 414 A-ASVLKHP 421
               + +HP
Sbjct: 263 VRGDIRQHP 271

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 40/169 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPV 305
            HS+   I +RDLKPENIL    D    + L DF L    I+ N++  +   TP      
Sbjct: 155 LHSL--NIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTP------ 203
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE+++         YD+  D W LG V+Y +L G PPFY             T
Sbjct: 204 ---EYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSR----------NT 244
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
                 IL   +Q             I++ A+ L+  LL KD  KRL A
Sbjct: 245 AEMYDNILNKPLQLK---------PNITNSARHLLEGLLQKDRTKRLGA 284

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 59/212 (27%)
Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQLL 112
           +GKG++  V       T+  YA+K ++K     R+ V   FKE++     + HP ++ L 
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLW 81
Query: 113 EYYEDDEN----------------------------------------HERHKRIAHRDL 132
             ++D+E+                                        + +++RI HRD+
Sbjct: 82  YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDM 141
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
           KP+NIL    D+   V + DF++ + +   T +          T  G+  +MAPE+   F
Sbjct: 142 KPDNILL---DEHGHVHITDFNIAAMLPRETQI---------TTMAGTKPYMAPEM---F 186
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
              + +GY    D WSLGV  Y LL G  P++
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 32/174 (18%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           Q I HRD+KP+NIL    D+   V + DF++ + +   T +          T  G+  +M
Sbjct: 134 QRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQI---------TTMAGTKPYM 181
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APE+   F   + +GY    D WSLGV  Y LL G  P++          R  T  + +E
Sbjct: 182 APEM---FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI---------RSST--SSKE 227
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS-VLKHPWIS 424
           I+ H+ +     +P    S  S E   L+++LL  +  +R S  S V   P+++
Sbjct: 228 IV-HTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMN 276

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
           CHA Q          + HRDLK EN L       SP   +K+CDF    G   ++ +HS 
Sbjct: 131 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICDF----GYSKSSVLHSQ 172
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
           P +T      VG+  ++APE++   +  E  G  K  D+WS GV +Y++L G  PF  + 
Sbjct: 173 PKST------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 220
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
            E   +++            H I    Y  P+  +  IS E + LI R+ V D  KR+S 
Sbjct: 221 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 268
Query: 415 ASVLKHPW 422
             +  H W
Sbjct: 269 PEIRNHEW 276

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
           CHA Q          + HRDLK EN L       SP   +K+CDF    G   ++ +HS 
Sbjct: 130 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICDF----GYSKSSVLHSQ 171
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
           P +T      VG+  ++APE++   +  E  G  K  D+WS GV +Y++L G  PF  + 
Sbjct: 172 PKST------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 219
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
            E   +++            H I    Y  P+  +  IS E + LI R+ V D  KR+S 
Sbjct: 220 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 267
Query: 415 ASVLKHPW 422
             +  H W
Sbjct: 268 PEIRNHEW 275

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 43/216 (19%)
Query: 213 VYILLCGYP--PFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCV 267
           +Y++L   P    Y    + C +    T    +E+   L +   + + HRD+KPEN+L  
Sbjct: 98  IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLG 157
Query: 268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
                  +K+ DF          SVH+P  +    T  G+ +++ PE++   M      +
Sbjct: 158 ---LKGELKIADF--------GWSVHAP--SLRRKTMCGTLDYLPPEMIEGRM------H 198
Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
           +++ DLW +GV+ Y LL G PPF                 A     +  I +    FP  
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFES---------------ASHNETYRRIVKVDLKFP-- 241
Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             +++   A+DLI +LL  +  +RL  A V  HPW+
Sbjct: 242 --ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWV 275

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           G  HRD+KP+NIL    D+   ++L DF  GS +K          T   L  VG+ ++++
Sbjct: 182 GYVHRDIKPDNILL---DRCGHIRLADF--GSCLKLRAD-----GTVRSLVAVGTPDYLS 231
Query: 313 PEIVNAFMGPEASGYDK-RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           PEI+ A  G   +G     CD W+LGV  Y +  G  PFY +   +     G+  H  + 
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---YGKIVHYKEH 288
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWI 423
           +    + +G           + +EA+D I+RLL     +  R  A     HP+ 
Sbjct: 289 LSLPLVDEG-----------VPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           Q I HRD+KP N+L         +K+ DF + +  K + +        LL   VG+  FM
Sbjct: 156 QKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEFKGSDA--------LLSNTVGTPAFM 204
Query: 312 APEIVNA----FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
           APE ++     F G       K  D+W++GV +Y  + G  PF          +R    H
Sbjct: 205 APESLSETRKIFSG-------KALDVWAMGVTLYCFVFGQCPFMD--------ERIMCLH 249
Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           +        I+    +FP+     I+++ KDLI R+L K+   R+    +  HPW++
Sbjct: 250 S-------KIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 57/217 (26%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQL 111
           +++G+GA+  VQ   +  ++  YA+K++ K      S S  F E          P ++QL
Sbjct: 81  KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 112 LEYYEDDE-------------------NHERHKRIA--------------------HRDL 132
              ++DD+                   N++  ++ A                    HRD+
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 200
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPVGSAEFMAPEIVN 190
           KP+N+L    D+   +KL DF  G+ +K + +  VH         T VG+ ++++PE++ 
Sbjct: 201 KPDNMLL---DKHGHLKLADF--GTCMKMDETGMVHCD-------TAVGTPDYISPEVLK 248
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           +  G     Y + CD WS+GV ++ +L G  PFY + 
Sbjct: 249 SQGGD--GYYGRECDWWSVGVFLFEMLVGDTPFYADS 283

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPVGSAEF 310
           G+ HRD+KP+N+L    D+   +KL DF  G+ +K + +  VH         T VG+ ++
Sbjct: 194 GLIHRDVKPDNMLL---DKHGHLKLADF--GTCMKMDETGMVHCD-------TAVGTPDY 241
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
           ++PE++ +  G     Y + CD WS+GV ++ +L G  PFY + 
Sbjct: 242 ISPEVLKSQGGD--GYYGRECDWWSVGVFLFEMLVGDTPFYADS 283

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 46/208 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++ I HRD+KP NIL    D+   VKL DF  G            +    +    G+ EF
Sbjct: 170 EKNICHRDVKPSNILM---DKNGRVKLSDF--GES--------EYMVDKKIKGSRGTYEF 216
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           M PE    F   E+S    + D+WSLG+ +Y++     PF              +     
Sbjct: 217 MPPE----FFSNESSYNGAKVDIWSLGICLYVMFYNVVPF--------------SLKISL 258
Query: 371 EILFHSIQQGHYDFP----------EGEWST-----ISDEAKDLIRRLLVKDARKRLSAA 415
             LF++I+  + ++P            + ST     +S+E  D ++  L K+  +R+++ 
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQ 443
             LKH W++          + ++ ++ +
Sbjct: 319 DALKHEWLADTNIEDLREFSKELYKKRK 346

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 80/184 (43%), Gaps = 43/184 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HS+  GI +RDLKPENIL    D+   +KL DF    G+      H   A        G
Sbjct: 146 LHSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSKEAIDHEKKAYSF----CG 192
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           + E+MAPE+VN        G+    D WS GV+++ +L G  PF G         R ET 
Sbjct: 193 TVEYMAPEVVNR------QGHSHSADWWSYGVLMFEMLTGSLPFQGK-------DRKETM 239
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
                 L    + G   F       +S EA+ L+R L  ++   RL      A  + +H 
Sbjct: 240 -----TLILKAKLGMPQF-------LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHV 287
Query: 422 WIST 425
           + ST
Sbjct: 288 FYST 291

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 40/173 (23%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKPEN+L    D     K+ DF L + +              L T  GS  + AP
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRTSCGSPNYAAP 179
Query: 314 EIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           E+++   + GPE        D+WS GV++Y LLCG  PF             +  H    
Sbjct: 180 EVISGRLYAGPEV-------DIWSCGVILYALLCGTLPF-------------DDEHV--P 217
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            LF  I+ G +  PE     ++     L+  +L  D  KR +   + +H W  
Sbjct: 218 TLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
            LGKG +A      +  T+  +A KI+ K   L  H R ++  E+ + H    H +++  
Sbjct: 28  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 86
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
             ++ED+                E H+R K                        R+ HRD
Sbjct: 87  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LK  N+     ++   VK+ DF L + ++++      L         G+  ++APE+++ 
Sbjct: 147 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNYIAPEVLSK 195
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  G+    D+WS+G ++Y LL G PPF  +C
Sbjct: 196 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 225

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++      L         G+  +
Sbjct: 139 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNY 187
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF  +C ++             
Sbjct: 188 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              +  I++  Y  P+     I+  A  LI+++L  D   R +   +L   + ++     
Sbjct: 230 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 282
Query: 431 RPLVT 435
           R  +T
Sbjct: 283 RLPIT 287

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
            LGKG +A      +  T+  +A KI+ K   L  H R ++  E+ + H    H +++  
Sbjct: 24  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 82
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
             ++ED+                E H+R K                        R+ HRD
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LK  N+     ++   VK+ DF L + ++++      L         G+  ++APE+++ 
Sbjct: 143 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNYIAPEVLSK 191
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  G+    D+WS+G ++Y LL G PPF  +C
Sbjct: 192 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 221

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++      L         G+  +
Sbjct: 135 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNY 183
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF  +C ++             
Sbjct: 184 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 225
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              +  I++  Y  P+     I+  A  LI+++L  D   R +   +L   + ++     
Sbjct: 226 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 278
Query: 431 RPLVT 435
           R  +T
Sbjct: 279 RLPIT 283

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
            LGKG +A      +  T+  +A KI+ K   L  H R ++  E+ + H    H +++  
Sbjct: 24  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 82
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
             ++ED+                E H+R K                        R+ HRD
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LK  N+     ++   VK+ DF L + ++++      L         G+  ++APE+++ 
Sbjct: 143 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNYIAPEVLSK 191
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  G+    D+WS+G ++Y LL G PPF  +C
Sbjct: 192 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 221

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++      L         G+  +
Sbjct: 135 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNY 183
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF  +C ++             
Sbjct: 184 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 225
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              +  I++  Y  P+     I+  A  LI+++L  D   R +   +L   + ++     
Sbjct: 226 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 278
Query: 431 RPLVT 435
           R  +T
Sbjct: 279 RLPIT 283

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
           GI HRDLKP NI+ V  D    +K+ DF L              +T  ++TP V +  + 
Sbjct: 144 GIIHRDLKPSNIV-VKSD--CTLKILDFGLARTA----------STNFMMTPYVVTRYYR 190
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCGWQRG 363
           APE++         GY +  D+WS+G ++  L+ G   F G           E  G    
Sbjct: 191 APEVILGM------GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 244
Query: 364 ETCHACQEILFHSIQQG-------------HYDFP-EGEWSTI-SDEAKDLIRRLLVKDA 408
           E   A Q  + + ++                + FP E E   I + +A+DL+ ++LV D 
Sbjct: 245 EFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDP 304
Query: 409 RKRLSAASVLKHPWIST 425
            KR+S    L+HP+I+ 
Sbjct: 305 DKRISVDEALRHPYITV 321

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 36/178 (20%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           H++Q  +AHRDLK EN L       SP   +K+ DF        ++   S + TP     
Sbjct: 132 HAMQ--VAHRDLKLENTLL----DGSPAPRLKIADFGYSKASVLHSQPKSAVGTP----- 180
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
                ++APE++   +  E  G  K  D+WS GV +Y++L G  PF  +  E   +++  
Sbjct: 181 ----AYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKT- 229
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
                     H I    Y  P+  +  IS E + LI R+ V D  KR+S   +  H W
Sbjct: 230 ---------IHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRP 432
           W +      A RP
Sbjct: 264 WYNKPLKKGAKRP 276

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI  V  D  + +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+GV++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
           CHA Q          + HRDLK EN L       SP   +K+C F    G   ++ +HS 
Sbjct: 131 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICAF----GYSKSSVLHSQ 172
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
           P +T      VG+  ++APE++   +  E  G  K  D+WS GV +Y++L G  PF  + 
Sbjct: 173 PKST------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 220
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
            E   +++            H I    Y  P+  +  IS E + LI R+ V D  KR+S 
Sbjct: 221 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 268
Query: 415 ASVLKHPW 422
             +  H W
Sbjct: 269 PEIRNHEW 276

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI  V  D  + +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+GV++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
            LGKG +A      +  T+  +A KI+ K   L  H R ++  E+ + H    H +++  
Sbjct: 46  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 104
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
             ++ED+                E H+R K                        R+ HRD
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LK  N+     ++   VK+ DF L + ++++      L         G+  ++APE+++ 
Sbjct: 165 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNYIAPEVLSK 213
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  G+    D+WS+G ++Y LL G PPF  +C
Sbjct: 214 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 243

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++      L         G+  +
Sbjct: 157 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNY 205
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF  +C ++             
Sbjct: 206 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 247
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              +  I++  Y  P+     I+  A  LI+++L  D   R +   +L   + ++     
Sbjct: 248 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 300
Query: 431 RPLVT 435
           R  +T
Sbjct: 301 RLPIT 305

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    D+   +KLCDF +   +     V S   T       G   +MAP
Sbjct: 147 IIHRDIKPSNILL---DRSGNIKLCDFGISGQL-----VDSIAKT----RDAGCRPYMAP 194
Query: 314 EIVNAFMGPEAS--GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           E ++    P AS  GYD R D+WSLG+ +Y L  G  P+         W      ++  +
Sbjct: 195 ERID----PSASRQGYDVRSDVWSLGITLYELATGRFPY-------PKW------NSVFD 237
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            L   ++         E    S    + +   L KD  KR     +LKHP+I
Sbjct: 238 QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 228 GEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL 282
            E+   QR E     ++IL      HS  QGI HRDLKP NI     D+   VK+ DF L
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFI---DESRNVKIGDFGL 162
Query: 283 GSGIKFNTSV------HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
              +  +  +      + P ++  L + +G+A ++A E+++         Y+++ D++SL
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-----TGHYNEKIDMYSL 217
Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEA 396
           G++ + ++    PF        G +R       + +   SI+     FP           
Sbjct: 218 GIIFFEMIY---PF------STGMERVNILKKLRSV---SIE-----FPPDFDDNKMKVE 260
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWI 423
           K +IR L+  D  KR  A ++L   W+
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 228 GEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL 282
            E+   QR E     ++IL      HS  QGI HRDLKP NI     D+   VK+ DF L
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFI---DESRNVKIGDFGL 162
Query: 283 GSGIKFNTSV------HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
              +  +  +      + P ++  L + +G+A ++A E+++         Y+++ D++SL
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-----TGHYNEKIDMYSL 217
Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEA 396
           G++ + ++    PF        G +R       + +   SI+     FP           
Sbjct: 218 GIIFFEMIY---PF------STGMERVNILKKLRSV---SIE-----FPPDFDDNKMKVE 260
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWI 423
           K +IR L+  D  KR  A ++L   W+
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
            LGKG +A      +  T+  +A KI+ K   L  H R ++  E+ + H    H +++  
Sbjct: 48  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 106
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
             ++ED+                E H+R K                        R+ HRD
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LK  N+     ++   VK+ DF L + ++++      L         G+  ++APE+++ 
Sbjct: 167 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNYIAPEVLSK 215
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  G+    D+WS+G ++Y LL G PPF  +C
Sbjct: 216 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++      L         G+  +
Sbjct: 159 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNY 207
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF  +C ++             
Sbjct: 208 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 249
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              +  I++  Y  P+     I+  A  LI+++L  D   R +   +L   + ++     
Sbjct: 250 ---YLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302
Query: 431 RPLVT 435
           R  +T
Sbjct: 303 RLPIT 307

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
            LGKG +A      +  T+  +A KI+ K   L  H R ++  E+ + H    H +++  
Sbjct: 22  FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 80
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
             ++ED+                E H+R K                        R+ HRD
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LK  N+     ++   VK+ DF L + ++++      L         G+  ++APE+++ 
Sbjct: 141 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNYIAPEVLSK 189
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
                  G+    D+WS+G ++Y LL G PPF  +C
Sbjct: 190 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++      L         G+  +
Sbjct: 133 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNY 181
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF  +C ++             
Sbjct: 182 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 223
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
              +  I++  Y  P+     I+  A  LI+++L  D   R +   +L   + ++     
Sbjct: 224 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 276
Query: 431 RPLVT 435
           R  +T
Sbjct: 277 RLPIT 281

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP N+     D    VKL DF L   +  +TS           T VG+  +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK--------TFVGTPYYMSP 185
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +N         Y+++ D+WSLG ++Y L    PPF         + + E     +E  
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF-------TAFSQKELAGKIREGK 232
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           F  I   +           SDE  ++I R+L      R S   +L++P I
Sbjct: 233 FRRIPYRY-----------SDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
           W
Sbjct: 263 W 263

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 49/213 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS--PLAT-----------P 299
           G+ HRD+KP NIL    +    VK+ DF L         V +  PL+            P
Sbjct: 129 GLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-- 357
           +L   V +  + APEI+   +G  ++ Y K  D+WSLG ++  +LCG P F G+   +  
Sbjct: 186 ILTDYVATRWYRAPEIL---LG--STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 358 ------CGWQRGETCHACQ----EILFHS------IQQGHYDFPEGEWSTI--------- 392
                   +   E   + Q    + +  S      I+Q +      +W  +         
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 393 -SDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            ++EA DL+ +LL  +  KR+SA   LKHP++S
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I HRD+K +N+L    +  S V K+ DF         TS       P   T  G+ ++MA
Sbjct: 143 IVHRDIKGDNVLI---NTYSGVLKISDF--------GTSKRLAGINPCTETFTGTLQYMA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI++   GP   GY K  D+WSLG  +  +  G PPFY         + GE   A  ++
Sbjct: 192 PEIIDK--GPR--GYGKAADIWSLGCTIIEMATGKPPFY---------ELGEPQAAMFKV 238
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
               +   H + PE    ++S EAK  I +    D  KR  A  +L   ++  +    +
Sbjct: 239 GMFKV---HPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKK 290

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 130
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 131 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 178
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 179 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 224

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 117 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 165
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 166 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 221 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 261
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 262 WYNKPLKKGAKRPRVT 277

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
           W
Sbjct: 263 W 263

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRP 432
           W +      A RP
Sbjct: 264 WYNKPLKKGAKRP 276

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
           W
Sbjct: 263 W 263

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKPEN+L    D     K+ DF L + +              L    GS  + AP
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRDSCGSPNYAAP 179
Query: 314 EIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           E+++   + GPE        D+WS GV++Y LLCG  PF             +  H    
Sbjct: 180 EVISGRLYAGPEV-------DIWSCGVILYALLCGTLPF-------------DDEHV--P 217
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            LF  I+ G +  PE     ++     L+  +L  D  KR +   + +H W  
Sbjct: 218 TLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 W 422
           W
Sbjct: 264 W 264

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
           W
Sbjct: 263 W 263

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
           W
Sbjct: 263 W 263

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
           CHA Q          + HRDLK EN L       SP   +K+C F    G   ++ +HS 
Sbjct: 131 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICAF----GYSKSSVLHSQ 172
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
           P  T      VG+  ++APE++   +  E  G  K  D+WS GV +Y++L G  PF  + 
Sbjct: 173 PKDT------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 220
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
            E   +++            H I    Y  P+  +  IS E + LI R+ V D  KR+S 
Sbjct: 221 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 268
Query: 415 ASVLKHPW 422
             +  H W
Sbjct: 269 PEIRNHEW 276

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 35/170 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP N+     D    VKL DF L   +  +TS             VG+  +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAF--------VGTPYYMSP 185
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +N         Y+++ D+WSLG ++Y L    PPF         + + E     +E  
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF-------TAFSQKELAGKIREGK 232
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           F  I   +           SDE  ++I R+L      R S   +L++P I
Sbjct: 233 FRRIPYRY-----------SDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
                 + +  D+WS G+V+  +L G  P+     +C E   W+  +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 W 422
           W
Sbjct: 264 W 264

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 66/225 (29%)
Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVK---IIDKLPGHSRSRVFKEVETFHHCQGH 105
           +R++ +I G+G ++ V     +L  +  A+K   I D +   +R+   KE++       H
Sbjct: 34  FRIEKKI-GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NH 91
Query: 106 PNIIQLL-EYYEDDE-------------------------------------------NH 121
           PN+I+    + ED+E                                            H
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
              +R+ HRD+KP N+          VKL D  LG      T+    L        VG+ 
Sbjct: 152 MHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSL--------VGTP 200
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            +M+PE ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 201 YYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 239

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + HRD+KP N+          VKL D  LG      T+    L        V
Sbjct: 149 LEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSL--------V 197
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
           G+  +M+PE ++       +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 198 GTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 239

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +C E   W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 65/216 (30%)
Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNII 109
           G+ LG G +  V+   + LT  + AVKI+++    S     ++ +E++     + HP+II
Sbjct: 21  GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHII 79
Query: 110 QL-------------LEYYED-------------DENHER-------------HKR-IAH 129
           +L             +EY                DE   R             H+  + H
Sbjct: 80  KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVH 139
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
           RDLKPEN+L    D     K+ DF L + +              L    GS  + APE++
Sbjct: 140 RDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRXSCGSPNYAAPEVI 187
Query: 190 NA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +   + GPE        D+WS GV++Y LLCG  PF
Sbjct: 188 SGRLYAGPEV-------DIWSSGVILYALLCGTLPF 216

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKPEN+L    D     K+ DF L + +              L    GS  + AP
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRXSCGSPNYAAP 184
Query: 314 EIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           E+++   + GPE        D+WS GV++Y LLCG  PF             +  H    
Sbjct: 185 EVISGRLYAGPEV-------DIWSSGVILYALLCGTLPF-------------DDDHV--P 222
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            LF  I  G +  P+     ++     L++ +L  D  KR +   + +H W  
Sbjct: 223 TLFKKICDGIFYTPQ----YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I HRD+K +N+L    +  S V K+ DF         TS       P   T  G+ ++MA
Sbjct: 129 IVHRDIKGDNVLI---NTYSGVLKISDF--------GTSKRLAGINPCTETFTGTLQYMA 177
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI++   GP   GY K  D+WSLG  +  +  G PPFY         + GE   A  ++
Sbjct: 178 PEIIDK--GPR--GYGKAADIWSLGCTIIEMATGKPPFY---------ELGEPQAAMFKV 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
               +   H + PE    ++S EAK  I +    D  KR  A  +L
Sbjct: 225 GMFKV---HPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLL 263

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  + + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTACTNFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCGWQRGE 364
           PE++         GY    D+WS+G ++  L+ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247
Query: 365 TCHACQEILFHSIQQG-------------HYDFP-EGEWSTI-SDEAKDLIRRLLVKDAR 409
              A Q  + + ++                + FP E E   I + +A+DL+ ++LV D  
Sbjct: 248 FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALRHPYITV 323

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 239 CHACQEILF---HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
            + C+EIL    H  Q  + HRD+K +N+L     + + VKL DF + + +       + 
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRN- 187
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                  T +G+  +MAPE++     P+A+ YD + DLWSLG+    +  G PP    C 
Sbjct: 188 -------TFIGTPYWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMAEGAPPL---C- 235
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
                      H  +  LF   +         +WS    + +  I   LVK+  +R +  
Sbjct: 236 ---------DMHPMR-ALFLIPRNPAPRLKSKKWSK---KFQSFIESCLVKNHSQRPATE 282
Query: 416 SVLKHPWI 423
            ++KHP+I
Sbjct: 283 QLMKHPFI 290

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 151 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 198
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
           PE++         GY +  DLWS+G ++  ++C    F G    D  W     Q G  C 
Sbjct: 199 PEVILGM------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLGTPCP 251
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
              + L  +++           Y F           + E + + + +A+DL+ ++LV DA
Sbjct: 252 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 311
Query: 409 RKRLSAASVLKHPWIST 425
            KR+S    L+HP+I+ 
Sbjct: 312 SKRISVDEALQHPYINV 328

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +GI +RDLK +N+L  H       KL DF +   GI    +  +   TP         ++
Sbjct: 143 KGIIYRDLKLDNVLLDHEGH---CKLADFGMCKEGICNGVTTATFCGTP---------DY 190
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APEI+   +      Y    D W++GV++Y +LCG+ PF     +D             
Sbjct: 191 IAPEILQEML------YGPAVDWWAMGVLLYEMLCGHAPFEAENEDD------------- 231
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS------VLKHPW-- 422
             LF +I      +P    + + ++A  +++  + K+   RL + +      +L+HP+  
Sbjct: 232 --LFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
Query: 423 -ISTAGTAHRPLVTPQVIRRNQSARELSSF 451
            I  A   HR  + P    R +S  ++S+F
Sbjct: 286 EIDWAQLNHRQ-IEPPFRPRIKSREDVSNF 314

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 140 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 187
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
           PE++         GY +  DLWS+G ++  ++C    F G    D  W     Q G  C 
Sbjct: 188 PEVILGM------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLGTPCP 240
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
              + L  +++           Y F           + E + + + +A+DL+ ++LV DA
Sbjct: 241 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 300
Query: 409 RKRLSAASVLKHPWIST 425
            KR+S    L+HP+I+ 
Sbjct: 301 SKRISVDEALQHPYINV 317

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 41/195 (21%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +Q + HRDLKP+N+L    ++   +KL DF L       T  +      L   P      
Sbjct: 118 RQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP------ 168
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
             P+I+   +G  ++ Y  + D+W +G + Y +  G P F G+  E       E  H   
Sbjct: 169 --PDIL---LG--STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-------EQLHFIF 214
Query: 371 EILFHSIQQ-----------GHYDFPEGEWSTI-------SDEAKDLIRRLLVKDARKRL 412
            IL    ++             Y++P+     +         +  DL+ +LL  + R R+
Sbjct: 215 RILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI 274
Query: 413 SAASVLKHPWISTAG 427
           SA   +KHP+  + G
Sbjct: 275 SAEDAMKHPFFLSLG 289

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI  V  D  + +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D  + +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D  + +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 51/201 (25%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L                       G++  M 
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLART-------------------AGTSFMME 183
Query: 313 PEIVNAFM-GPEA---SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRG 363
           PE+V  +   PE     GY +  D+WS+G ++  ++C    F G    D  W     Q G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLG 242
Query: 364 ETCHACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLL 404
             C A  + L  +++           Y F           + E + + + +A+DL+ ++L
Sbjct: 243 TPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 405 VKDARKRLSAASVLKHPWIST 425
           V DA KR+S    L+HP+I+ 
Sbjct: 303 VIDASKRISVDEALQHPYINV 323

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 54/210 (25%)
Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           + LG+GAY  VQ  VN +TE   AVKI+D           K+    +    H N+++   
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
                      LEY    E  +R                H+ +A           HRD+K
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PEN+L    D L   K+ DF L +  ++N          LL    G+  ++APE++    
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                 + +  D+WS G+V+  +L G  P+
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
           +  H I  GI HRD+KPEN+L    D L   K+ DF L +  ++N          LL   
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
            G+  ++APE++          + +  D+WS G+V+  +L G  P+     +  E   W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
             +T                Y  P   W  I      L+ ++LV++   R++   + K  
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
           W +      A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 55/218 (25%)
Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           +D + + GE LG GA+  V    N  T +  A K+ID            E++    C  H
Sbjct: 36  EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 93
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
           PNI++LL+  YYE                                       D  N+   
Sbjct: 94  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            +I HRDLK  NIL         +KL DF  G   K   ++    +       +G+  +M
Sbjct: 154 NKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRTIQRRDSF------IGTPYWM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           APE+V      +   YD + D+WSLG+ +  +    PP
Sbjct: 203 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 28/188 (14%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
            C    + L +     I HRDLK  NIL         +KL DF  G   K   ++    +
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRTIQRRDS 194
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
                  +G+  +MAPE+V      +   YD + D+WSLG+ +  +    PP +      
Sbjct: 195 F------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHH------ 241
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
                    +  + +L  +  +         WS+     KD +++ L K+   R + + +
Sbjct: 242 -------ELNPMRVLLKIAKSEPPTLAQPSRWSS---NFKDFLKKCLEKNVDARWTTSQL 291
Query: 418 LKHPWIST 425
           L+HP+++ 
Sbjct: 292 LQHPFVTV 299

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 209
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 210 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 265 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 304
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 162
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 163 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 218 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 257
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 258 LKRDPKQRISIPELLAHPYV 277

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 181
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 182 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 237 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPEK-------DLQDVLKCC 276
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVG 306
           HS+Q  I HRDLK EN L +       +K+CDF    G   ++ +HS P +T      VG
Sbjct: 133 HSMQ--ICHRDLKLENTL-LDGSPAPRLKICDF----GYSKSSVLHSQPKST------VG 179
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +  ++APE++   +  E  G  K  D+WS GV +Y++L G  PF     ED    R +  
Sbjct: 180 TPAYIAPEVL---LRQEYDG--KIADVWSCGVTLYVMLVGAYPF-----EDPEEPR-DYR 228
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
              Q IL  S++   Y  P+     IS E   LI R+ V D   R+S   +  H W
Sbjct: 229 KTIQRIL--SVK---YSIPDD--IRISPECCHLISRIFVADPATRISIPEIKTHSW 277

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 209
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 210 -----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 265 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 304
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 111 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 165
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 166 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 221 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 260
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 261 LKRDPKQRISIPELLAHPYV 280

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 209
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 210 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 265 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPEK-------DLQDVLKCC 304
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 38/207 (18%)
Query: 228 GEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL 282
            E+   QR E     ++IL      HS  QGI HR+LKP NI     D+   VK+ DF L
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHS--QGIIHRNLKPXNIFI---DESRNVKIGDFGL 162
Query: 283 GSGIKFNTSV------HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
              +  +  +      + P ++  L + +G+A ++A E+++         Y+++ D +SL
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDG-----TGHYNEKIDXYSL 217
Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEA 396
           G++ +  +    PF        G +R       + +   SI+     FP           
Sbjct: 218 GIIFFEXIY---PF------STGXERVNILKKLRSV---SIE-----FPPDFDDNKXKVE 260
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWI 423
           K +IR L+  D  KR  A ++L   W+
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 61/232 (26%)
Query: 40  LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETF 99
           ++     + Y++  + LG G  ++V    + +  ++ A+K I  +P   +    K  E  
Sbjct: 4   MIGKIINERYKIVDK-LGGGGMSTVYLAEDTILNIKVAIKAI-FIPPREKEETLKRFERE 61
Query: 100 HHCQG---HPNIIQLLEYYEDDE------------------------------------- 119
            H      H NI+ +++  E+D+                                     
Sbjct: 62  VHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121
Query: 120 ---NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
               H    RI HRD+KP+NIL    D    +K+ DF    GI    S  S   T  +L 
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDF----GIAKALSETSLTQTNHVL- 173
Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
             G+ ++ +PE        +    D+  D++S+G+V+Y +L G PPF G   
Sbjct: 174 --GTVQYFSPE------QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+    I HRD+KP+NIL    D    +K+ DF    GI    S  S   T  +L   G+
Sbjct: 126 HAHDMRIVHRDIKPQNILI---DSNKTLKIFDF----GIAKALSETSLTQTNHVL---GT 175
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
            ++ +PE        +    D+  D++S+G+V+Y +L G PPF G   
Sbjct: 176 VQYFSPE------QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 33/191 (17%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 305
           H  Q  I HRDLKP+N+L ++ D    +KL DF L    GI   +  H           V
Sbjct: 134 HCHQHRILHRDLKPQNLL-INSD--GALKLADFGLARAFGIPVRSYTHE----------V 180
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------- 357
            +  + AP+++   MG  +  Y    D+WS+G +   ++ G P F G   +D        
Sbjct: 181 VTLWYRAPDVL---MG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTIS----DEAKDLIRRLLVKDARKRLS 413
            G          QE+     Q+    F +  WS+I      E  DL+  +L  D  KR+S
Sbjct: 236 LGTPNPREWPQVQELPLWK-QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS 294
Query: 414 AASVLKHPWIS 424
           A   + HP+  
Sbjct: 295 ARDAMNHPYFK 305

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +T+ 
Sbjct: 107 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 161
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                + +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 162 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 217 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 256
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 257 LKRDPKQRISIPELLAHPYV 276

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
           PE++         GY +  D+WS+G ++  ++ G   F G    D  W     Q G  C 
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCP 246
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
              + L  +++           Y F           + E + + + +A+DL+ ++LV DA
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 409 RKRLSAASVLKHPWIST 425
            KR+S    L+HP+I+ 
Sbjct: 307 SKRISVDEALQHPYINV 323

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 147 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
           PE++         GY +  D+WS+G ++  ++ G   F G    D  W     Q G  C 
Sbjct: 195 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCP 247
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
              + L  +++           Y F           + E + + + +A+DL+ ++LV DA
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 409 RKRLSAASVLKHPWIST 425
            KR+S    L+HP+I+ 
Sbjct: 308 SKRISVDEALQHPYINV 324

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 33/191 (17%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 305
           H  Q  I HRDLKP+N+L ++ D    +KL DF L    GI   +  H           V
Sbjct: 134 HCHQHRILHRDLKPQNLL-INSD--GALKLADFGLARAFGIPVRSYTHE----------V 180
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------- 357
            +  + AP+++   MG  +  Y    D+WS+G +   ++ G P F G   +D        
Sbjct: 181 VTLWYRAPDVL---MG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTIS----DEAKDLIRRLLVKDARKRLS 413
            G          QE+     Q+    F +  WS+I      E  DL+  +L  D  KR+S
Sbjct: 236 LGTPNPREWPQVQELPLWK-QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS 294
Query: 414 AASVLKHPWIS 424
           A   + HP+  
Sbjct: 295 ARDAMNHPYFK 305

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 83/218 (38%), Gaps = 55/218 (25%)
Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           +D + + GE LG GA+  V    N  T +  A K+ID            E++    C  H
Sbjct: 36  EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 93
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
           PNI++LL+  YYE                                       D  N+   
Sbjct: 94  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            +I HRDLK  NIL         +KL DF  G   K    +    +       +G+  +M
Sbjct: 154 NKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRXIQRRDSF------IGTPYWM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           APE+V      +   YD + D+WSLG+ +  +    PP
Sbjct: 203 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
           GI HRDLKP NI+ V  D    +K+ DF L               T  ++TP V +  + 
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLARTA----------GTSFMMTPEVVTRYYR 192
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETC 366
           APE++         GY +  D+WS+G ++  ++ G   F G    D  W     Q G  C
Sbjct: 193 APEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPC 245
Query: 367 HACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKD 407
               + L  +++           Y F           + E + + + +A+DL+ ++LV D
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 408 ARKRLSAASVLKHPWIST 425
           A KR+S    L+HP+I+ 
Sbjct: 306 ASKRISVDEALQHPYINV 323

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           QGI H+D+KP N+L      L           S +    ++H   A     T  GS  F 
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKI---------SALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
            PEI N       SG+  + D+WS GV +Y +  G  PF            G+  +    
Sbjct: 179 PPEIANGL--DTFSGF--KVDIWSAGVTLYNITTGLYPF-----------EGDNIYK--- 220
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            LF +I +G Y  P      +S    DL++ +L  +  KR S   + +H W 
Sbjct: 221 -LFENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWF 267

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 51/201 (25%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L                       G++  M 
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLART-------------------AGTSFMME 183
Query: 313 PEIVNAFM-GPEA---SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRG 363
           PE+V  +   PE     GY +  DLWS+G ++  ++C    F G    D  W     Q G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLG 242
Query: 364 ETCHACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLL 404
             C    + L  +++           Y F           + E + + + +A+DL+ ++L
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 405 VKDARKRLSAASVLKHPWIST 425
           V DA KR+S    L+HP+I+ 
Sbjct: 303 VIDASKRISVDEALQHPYINV 323

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++  ++ G   F G           E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
                Q  +   ++       Y F           + E + + + +A+DL+ ++LV DA 
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDEALQHPYINV 323

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
           Q    C +    L +   QG+ HRD+K ++IL     +   +KL DF    G     S  
Sbjct: 142 QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR---IKLSDF----GFCAQVSKE 194
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
            P    L    VG+  +MAPE+++         Y    D+WSLG++V  ++ G PP++  
Sbjct: 195 VPKRKXL----VGTPYWMAPEVISRL------PYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
                     +     ++ L   ++  H          +S   +  +  +LV++  +R +
Sbjct: 245 PPL-------QAMRRIRDSLPPRVKDLH---------KVSSVLRGFLDLMLVREPSQRAT 288
Query: 414 AASVLKHPWISTAG 427
           A  +L HP++  AG
Sbjct: 289 AQELLGHPFLKLAG 302

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP N+     D    VKL DF L   +  +               VG+  +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDEDFAKEF--------VGTPYYMSP 185
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +N         Y+++ D+WSLG ++Y L    PPF         + + E     +E  
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF-------TAFSQKELAGKIREGK 232
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           F  I   +           SDE  ++I R+L      R S   +L++P I
Sbjct: 233 FRRIPYRY-----------SDELNEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S +  P ++T      + A
Sbjct: 148 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMVPFVVTRY----YRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
           PE++         GY +  D+WS+G ++  ++ G   F G    D  W     Q G  C 
Sbjct: 196 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCP 248
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
              + L  +++           Y F           + E + + + +A+DL+ ++LV DA
Sbjct: 249 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 308
Query: 409 RKRLSAASVLKHPWIST 425
            KR+S    L+HP+I+ 
Sbjct: 309 SKRISVDEALQHPYINV 325

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 55/218 (25%)
Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           +D + + GE LG GA+  V    N  T +  A K+ID            E++    C  H
Sbjct: 36  EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 93
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
           PNI++LL+  YYE                                       D  N+   
Sbjct: 94  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            +I HRDLK  NIL         +KL DF + +                    +G+  +M
Sbjct: 154 NKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRXIQRRDXF--------IGTPYWM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           APE+V      +   YD + D+WSLG+ +  +    PP
Sbjct: 203 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HRD+K +NIL         VKL DF   + I    S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 171
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S        T VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 172 KRS--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261
Query: 412 LSAASVLKHPWISTA 426
            SA  +L+H ++  A
Sbjct: 262 GSAKELLQHQFLKIA 276

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HRD+K +NIL         VKL DF   + I    S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 171
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S +        VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 172 KRSXM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 261
Query: 412 LSAASVLKHPWISTA 426
            SA  +L+H ++  A
Sbjct: 262 GSAKELLQHQFLKIA 276

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HRD+K +NIL         VKL DF   + I    S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 171
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S +        VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 172 KRSEM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261
Query: 412 LSAASVLKHPWISTA 426
            SA  +L+H ++  A
Sbjct: 262 GSAKELLQHQFLKIA 276

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N+  V+ D  S +++ DF L              A   +   V +  + A
Sbjct: 151 GIIHRDLKPSNV-AVNED--SELRILDFGLARQ-----------ADEEMTGYVATRWYRA 196
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+  +M      Y++  D+WS+G ++  LL G   F G+   D   +  E        
Sbjct: 197 PEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 373 LFHSIQQGHYD--------FPEGEWSTISDEAK----DLIRRLLVKDARKRLSAASVLKH 420
           +   I   H           P+ + S+I   A     DL+ R+LV D+ +R+SAA  L H
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 421 PWIS 424
            + S
Sbjct: 312 AYFS 315

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N+  V+ D  S +++ DF L              A   +   V +  + A
Sbjct: 151 GIIHRDLKPSNV-AVNED--SELRILDFGLARQ-----------ADEEMTGYVATRWYRA 196
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+  +M      Y++  D+WS+G ++  LL G   F G+   D   +  E        
Sbjct: 197 PEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 373 LFHSIQQGHYD--------FPEGEWSTISDEAK----DLIRRLLVKDARKRLSAASVLKH 420
           +   I   H           P+ + S+I   A     DL+ R+LV D+ +R+SAA  L H
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 421 PWIS 424
            + S
Sbjct: 312 AYFS 315

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 36/168 (21%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           LF   ++GI +RDLK +N++    D    +K+ DF +      +                
Sbjct: 133 LFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFC-------- 181
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+          Y K  D W+ GV++Y +L G PPF    GED        
Sbjct: 182 GTPDYIAPEII------AYQPYGKSVDWWAYGVLLYEMLAGQPPF---DGED-------- 224
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
               ++ LF SI + +  +P+    ++S EA  + + L+ K   KRL 
Sbjct: 225 ----EDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKRLG 264

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           G+ HRDLKP N L V+ D    +K+ DF L              A   +   V +  + A
Sbjct: 146 GVVHRDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PE++ ++M      Y++  D+WS+G ++  +L G   F G    D         G    E
Sbjct: 192 PEVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                 +    S  Q     P  +++ +    S +A DL+ ++L  D  KRL+AA  L H
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306
Query: 421 PWI 423
           P+ 
Sbjct: 307 PFF 309

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 81/197 (41%), Gaps = 34/197 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HSI  GI HRD+KP+N+L   P  +  +KL DF          S    +A    ++ + 
Sbjct: 157 IHSI--GICHRDIKPQNLLLDPPSGV--LKLIDFG---------SAKILIAGEPNVSXIC 203
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           S  + APE++       A+ Y    D+WS G V+  L+ G P F G  G D   Q  E  
Sbjct: 204 SRYYRAPELIFG-----ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID---QLVEII 255
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTIS-------------DEAKDLIRRLLVKDARKRLS 413
                     I+  + ++ E ++  I               +A DLI RLL      RL+
Sbjct: 256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
Query: 414 AASVLKHPWISTAGTAH 430
           A   L HP+     T  
Sbjct: 316 AIEALCHPFFDELRTGE 332

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HRD+K +NIL         VKL DF   + I    S
Sbjct: 118 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 172
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S +        VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 173 KRSXM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  KR
Sbjct: 219 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 262
Query: 412 LSAASVLKHPWISTA 426
            SA  +++H ++  A
Sbjct: 263 GSAKELIQHQFLKIA 277

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++ I +RDLKPENIL    D    +++ D  L        +VH P     +   VG+  +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVPEGQ-TIKGRVGTVGY 351
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+V      +   Y    D W+LG ++Y ++ G  PF          QR       +
Sbjct: 352 MAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPFQ---------QRK------K 390
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
           +I    +++   + PE      S +A+ L  +LL KD  +RL     SA  V +HP
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           G+ HRDLKP N L V+ D    +K+ DF L              A   +   V +  + A
Sbjct: 164 GVVHRDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRA 209
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PE++ ++M      Y++  D+WS+G ++  +L G   F G    D         G    E
Sbjct: 210 PEVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                 +    S  Q     P  +++ +    S +A DL+ ++L  D  KRL+AA  L H
Sbjct: 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324
Query: 421 PWI 423
           P+ 
Sbjct: 325 PFF 327

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+      L   K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDDALQHPYINV 323

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++ I +RDLKPENIL    D    +++ D  L        +VH P     +   VG+  +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVPEGQ-TIKGRVGTVGY 351
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+V      +   Y    D W+LG ++Y ++ G  PF          QR       +
Sbjct: 352 MAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPFQ---------QRK------K 390
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
           +I    +++   + PE      S +A+ L  +LL KD  +RL     SA  V +HP
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           +GI HRD+KP N++  H  Q   ++L D+ L        ++N               V S
Sbjct: 151 KGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVR-------------VAS 195
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             F  PE++  +       YD   D+WSLG ++  ++    PF+   G+D   Q      
Sbjct: 196 RYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRREPFF--HGQDNYDQLVRIAK 248
Query: 368 AC-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVK 406
               E L+  +++ H D                W           +S EA DL+ +LL  
Sbjct: 249 VLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRY 308
Query: 407 DARKRLSAASVLKHPWI 423
           D ++RL+A   ++HP+ 
Sbjct: 309 DHQQRLTAKEAMEHPYF 325

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+      L   K+ DF L       T+  S + TP ++T      + A
Sbjct: 139 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 187 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 301 KRISVDDALQHPYINV 316

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+      L   K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 308 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 346

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 49/247 (19%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
             HS+  GI HRD+KP+N+L    D    +KLCDF  GS  K   S  S       +  +
Sbjct: 156 FIHSL--GICHRDIKPQNLLVNSKDNT--LKLCDF--GSAKKLIPSEPS-------VAXI 202
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC----------- 354
            S  + APE++   +G  A+ Y    DLWS+G V   L+ G P F G             
Sbjct: 203 CSRFYRAPELM---LG--ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 355 -GEDCGWQRGETCHACQEILFHSIQQGHYD--FPEGEWSTISDEAKDLIRRLLVKDARKR 411
            G     Q         E+ F +++   +    PEG  S     A DL+ ++L  +   R
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL----AIDLLEQILRYEPDLR 313
Query: 412 LSAASVLKHPWISTAGTAHRPLVT-----PQVIRRNQSARELSSFAESAMSA------NR 460
           ++    + HP+      ++   V      P  +  NQ+  +L +F+   +S       NR
Sbjct: 314 INPYEAMAHPFFDHLRNSYESEVKNNSNFPHGV--NQNIPQLFNFSPYELSIIPGNVLNR 371
Query: 461 VILQHFS 467
           ++ ++FS
Sbjct: 372 ILPKNFS 378

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           +GI HRD+KP N++  H  Q   ++L D+ L        ++N               V S
Sbjct: 156 KGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVR-------------VAS 200
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             F  PE++  +       YD   D+WSLG ++  ++    PF+   G+D   Q      
Sbjct: 201 RYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRREPFF--HGQDNYDQLVRIAK 253
Query: 368 AC-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVK 406
               E L+  +++ H D                W           +S EA DL+ +LL  
Sbjct: 254 VLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRY 313
Query: 407 DARKRLSAASVLKHPWI 423
           D ++RL+A   ++HP+ 
Sbjct: 314 DHQQRLTAKEAMEHPYF 330

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 28/145 (19%)
Query: 210 GVVVYILLCGYPPF-YGNCGEDCGWQRGETCHACQE--ILFHSIQ-QGIAHRDLKPENIL 265
           G  +Y +L G  P  Y        W     C  C +     HS+Q + + HRDLKP N+L
Sbjct: 84  GGSLYNVLHGAEPLPYYTAAHAMSW-----CLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 266 CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS 325
            V    +  +K+CDF     I+ + + +            GSA +MAPE+       E S
Sbjct: 139 LVAGGTV--LKICDFGTACDIQTHMTNNK-----------GSAAWMAPEVF------EGS 179
Query: 326 GYDKRCDLWSLGVVVYILLCGYPPF 350
            Y ++CD++S G++++ ++    PF
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPF 204

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+      L   K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDDALQHPYINV 323

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 20/105 (19%)
Query: 247 FHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
            HS+Q + + HRDLKP N+L V    +  +K+CDF     I+ + + +            
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTV--LKICDFGTACDIQTHMTNNK----------- 164
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           GSA +MAPE+       E S Y ++CD++S G++++ ++    PF
Sbjct: 165 GSAAWMAPEVF------EGSNYSEKCDVFSWGIILWEVITRRKPF 203

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+      L   K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST 425
           KR+S    L+HP+I+ 
Sbjct: 308 KRISVDDALQHPYINV 323

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 40/185 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP+NIL     Q   +KL DF L     F  ++ S + T           + AP
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC--------------G 359
           E++        S Y    DLWS+G +   +    P F G+   D                
Sbjct: 189 EVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE-AKDLIRRLLVKDARKRLSAASVL 418
           W R     A     FHS        P  ++ T  DE  KDL+ + L  +  KR+SA S L
Sbjct: 243 WPRDV---ALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 419 KHPWI 423
            HP+ 
Sbjct: 296 SHPYF 300

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 40/185 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP+NIL     Q   +KL DF L     F  ++ S + T           + AP
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC--------------G 359
           E++        S Y    DLWS+G +   +    P F G+   D                
Sbjct: 189 EVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE-AKDLIRRLLVKDARKRLSAASVL 418
           W R     A     FHS        P  ++ T  DE  KDL+ + L  +  KR+SA S L
Sbjct: 243 WPRDV---ALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 419 KHPWI 423
            HP+ 
Sbjct: 296 SHPYF 300

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 184 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 231
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 232 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 346 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 384

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           W+R        E +    Q GI H DLKP N L V       +KL DF + + ++ +   
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDX-- 180
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
                  +  + VG+  +M PE +        +G  K       D+WSLG ++Y +  G 
Sbjct: 181 ----XXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
            PF     +          HA      EI F        D PE        + +D+++  
Sbjct: 237 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPEK-------DLQDVLKCC 276
Query: 404 LVKDARKRLSAASVLKHPWI 423
           L +D ++R+S   +L HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 40/185 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRDLKP+NIL     Q   +KL DF L     F  ++ S + T           + AP
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC--------------G 359
           E++        S Y    DLWS+G +   +    P F G+   D                
Sbjct: 189 EVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE-AKDLIRRLLVKDARKRLSAASVL 418
           W R     A     FHS        P  ++ T  DE  KDL+ + L  +  KR+SA S L
Sbjct: 243 WPRDV---ALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 419 KHPWI 423
            HP+ 
Sbjct: 296 SHPYF 300

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 32/173 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 145 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +      + + Y  + D+WS+G+ +  +  G  P     G            A  E+L
Sbjct: 192 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG----------SMAIFELL 235
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
            + + +     P G +S    E +D + + L+K+  +R     ++ H +I  +
Sbjct: 236 DYIVNEPPPKLPSGVFSL---EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 226 NCGEDC-GWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
           N  ED  G+Q         +I   L H  Q+ I +RDLKPEN+L    D    V++ D  
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLG 334
Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           L   +K   +     A        G+  FMAPE++   +G E   YD   D ++LGV +Y
Sbjct: 335 LAVELKAGQTKTKGYA--------GTPGFMAPELL---LGEE---YDFSVDYFALGVTLY 380
Query: 342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
            ++    PF           RGE     +  L   + +    +P+      S  +KD   
Sbjct: 381 EMIAARGPFRA---------RGEKVENKE--LKQRVLEQAVTYPD----KFSPASKDFCE 425
Query: 402 RLLVKDARKRLS 413
            LL KD  KRL 
Sbjct: 426 ALLQKDPEKRLG 437

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 184 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 231
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 232 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 346 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 384

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 226 NCGEDC-GWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
           N  ED  G+Q         +I   L H  Q+ I +RDLKPEN+L    D    V++ D  
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLG 334
Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           L   +K   +     A        G+  FMAPE++   +G E   YD   D ++LGV +Y
Sbjct: 335 LAVELKAGQTKTKGYA--------GTPGFMAPELL---LGEE---YDFSVDYFALGVTLY 380
Query: 342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
            ++    PF           RGE     +  L   + +    +P+      S  +KD   
Sbjct: 381 EMIAARGPFRA---------RGEKVENKE--LKQRVLEQAVTYPD----KFSPASKDFCE 425
Query: 402 RLLVKDARKRLS 413
            LL KD  KRL 
Sbjct: 426 ALLQKDPEKRLG 437

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 308 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 346

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 147 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 195 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 308
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 309 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 347

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 226 NCGEDC-GWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
           N  ED  G+Q         +I   L H  Q+ I +RDLKPEN+L    D    V++ D  
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLG 334
Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           L   +K   +     A        G+  FMAPE++   +G E   YD   D ++LGV +Y
Sbjct: 335 LAVELKAGQTKTKGYA--------GTPGFMAPELL---LGEE---YDFSVDYFALGVTLY 380
Query: 342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
            ++    PF           RGE     +  L   + +    +P+      S  +KD   
Sbjct: 381 EMIAARGPFRA---------RGEKVENKE--LKQRVLEQAVTYPD----KFSPASKDFCE 425
Query: 402 RLLVKDARKRLS 413
            LL KD  KRL 
Sbjct: 426 ALLQKDPEKRLG 437

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 147 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 195 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 308
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 309 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 347

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 145 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 192
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 193 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 246
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 247 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 306
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 307 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 345

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 36/167 (21%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           LF    +GI +RDLK +N++    D    +K+ DF +        ++   + T       
Sbjct: 455 LFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCK-----ENIWDGVTTKXF---C 503
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+          Y K  D W+ GV++Y +L G  PF    GED        
Sbjct: 504 GTPDYIAPEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GED-------- 546
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
               ++ LF SI + +  +P+    ++S EA  + + L+ K   KRL
Sbjct: 547 ----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRL 585

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           Q    C  C + L   HS Q  + HR++K +NIL         VKL DF   + I    S
Sbjct: 118 QIAAVCRECLQALEFLHSNQ--VIHRNIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 172
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             S        T VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+ 
Sbjct: 173 KRS--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                                L+     G  +    E   +S   +D + R L  D  KR
Sbjct: 219 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 262
Query: 412 LSAASVLKHPWISTA 426
            SA  +++H ++  A
Sbjct: 263 GSAKELIQHQFLKIA 277

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 139 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 187 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 301 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 339

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 140 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 187
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 188 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 302 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 340

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 140 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 187
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 188 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 302 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 340

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP NI+ V  D    +K+ DF L       T+  S + TP ++T      + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
           PE++         GY +  D+WS+G ++       IL  G  Y   +    E  G    E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
                Q  + + ++ +  Y        FP+  +   S+       +A+DL+ ++LV D  
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
           KR+S    L+HP+I+     A      PQ+  +    RE
Sbjct: 308 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 346

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 164 NVLHRDLKPSNLLI---NTTCDLKICDFGLA---RIADPEHD--HTGFLTEXVATRWYRA 215
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PEI+       + GY K  D+WS+G ++  +L   P F G    D         G    E
Sbjct: 216 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
             +    +   +  Q      +  W+ +      +A DL+ R+L  +  KR++    L H
Sbjct: 271 DLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 421 PWI 423
           P++
Sbjct: 331 PYL 333

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 36/168 (21%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           LF    +GI +RDLK +N++    D    +K+ DF +        ++   + T       
Sbjct: 134 LFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCK-----ENIWDGVTTKXF---C 182
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+          Y K  D W+ GV++Y +L G  PF    GED        
Sbjct: 183 GTPDYIAPEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GED-------- 225
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
               ++ LF SI + +  +P+    ++S EA  + + L+ K   KRL 
Sbjct: 226 ----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLG 265

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  Q+ I +RDLKPEN+L    D    V++ D  L   +K   +     A        
Sbjct: 302 LEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA-------- 350
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  FMAPE++   +G E   YD   D ++LGV +Y ++    PF           RGE 
Sbjct: 351 GTPGFMAPELL---LGEE---YDFSVDYFALGVTLYEMIAARGPFRA---------RGEK 395
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
               +  L   + +    +P+      S  +KD    LL KD  KRL 
Sbjct: 396 VENKE--LKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRLG 437

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N L V+ D    +K+ DF L              A   +   V +  + A
Sbjct: 148 GIIHRDLKPGN-LAVNED--CELKILDFGLARQ-----------ADSEMXGXVVTRWYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PE++  +M      Y +  D+WS+G ++  ++ G   F G+   D         G    E
Sbjct: 194 PEVILNWM-----RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                Q     +  +G  +  + ++++I    S  A +L+ ++LV DA +R++A   L H
Sbjct: 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308
Query: 421 PWISTAGTAHRPLVTPQVIRRNQS 444
           P+     + H     PQV + + S
Sbjct: 309 PYFE---SLHDTEDEPQVQKYDDS 329

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 80/215 (37%), Gaps = 35/215 (16%)
Query: 236 GETCHACQEILFHSIQ-------QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
           G      Q+ LF  I          I HRD+KPENIL     Q   VKLCDF     +  
Sbjct: 120 GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAA 176
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
              V+           V +  + APE++          Y K  D+W++G +V  +  G P
Sbjct: 177 PGEVYD--------DEVATRWYRAPELLVG-----DVKYGKAVDVWAIGCLVTEMFMGEP 223
Query: 349 PFYGNCGEDCGWQ----RGETCHACQEILFHSIQQGHYDFP--------EGEWSTISDEA 396
            F G+   D  +      G      QE+   +        P        E  +  +S+  
Sbjct: 224 LFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVV 283
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
            DL ++ L  D  KR   A +L H +    G A R
Sbjct: 284 IDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER 318

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 31/184 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRDLKP N+  V+ D    +++ DF L              A   +   V +  + A
Sbjct: 143 GIIHRDLKPSNV-AVNED--CELRILDFGLARQ-----------ADEEMTGYVATRWYRA 188
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
           PEI+  +M      Y++  D+WS+G ++  LL G   F G+   D   +  E        
Sbjct: 189 PEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 243
Query: 373 LFHSIQQGHYD--------FPEGEWSTISDEAK----DLIRRLLVKDARKRLSAASVLKH 420
           +   I   H           P+ + S+I   A     DL+ R+LV D+ +R+SAA  L H
Sbjct: 244 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 303
Query: 421 PWIS 424
            + S
Sbjct: 304 AYFS 307

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCGWQRGETCHACQEI 372
           E +      + + Y  + D+WS+G+ +  +  G YP    +  ED          A  E+
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS-----RPPMAIFEL 221
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
           L + + +     P G +S    E +D + + L+K+  +R     ++ H +I  +
Sbjct: 222 LDYIVNEPPPKLPSGVFSL---EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 145 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 189
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 190 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 305 QERLTALEAMTHPYFQQVRAA 325

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 145 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 189
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 190 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 305 QERLTALEAMTHPYFQQVRAA 325

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 165 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 209
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 210 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 264
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 265 GTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 324
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 325 QERLTALEAMTHPYFQQVRAA 345

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D  S +K+ DF L        + +           V +  + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--SELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
           + +
Sbjct: 313 YFA 315

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 176 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 224
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 225 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 146 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 190
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 191 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 245
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 246 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 305
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 306 QERLTALEAMTHPYFQQVRAA 326

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
           QGI HRD+KP N++  H  +L  ++L D+ L      G ++N               V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
             F  PE++      +   YD   D+WSLG +   ++    P FYG+   D         
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
                       R E     + ++    ++    F   +    +S EA D + +LL  D 
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
           ++RL+A   + HP+      A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 154 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 202
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 203 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D  S +K+ DF L        + +           V +  + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--SELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
           + +
Sbjct: 309 YFA 311

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 161 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 209
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 210 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 249

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           I HRDL+  NI     D+ +PV  K+ DF L        SVHS   + LL    G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE +    G E   Y ++ D +S  +++Y +L G  PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           I HRDL+  NI     D+ +PV  K+ DF L        SVHS   + LL    G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE +    G E   Y ++ D +S  +++Y +L G  PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +  S +K+CDF L    +     H    T  L   V +  + A
Sbjct: 146 NVLHRDLKPSNLLL---NTTSDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 198 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 372 ILFHSIQQGHYDF-------PEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L   I     ++        +  W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 253 DLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 421 PWIS 424
           P+++
Sbjct: 313 PYLA 316

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 150 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 198
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 199 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 238

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 154 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 202
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 203 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 143 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 192 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 231

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 83/219 (37%), Gaps = 71/219 (32%)
Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQGHPN 107
           LG GA+  V T V+     E  VK I K        +      +V  E+      + H N
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HAN 90
Query: 108 IIQLLEYYEDD-------ENH----------ERHKR------------------------ 126
           II++L+ +E+        E H          +RH R                        
Sbjct: 91  IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+K ENI+         +KL DF  GS               L  T  G+ E+ AP
Sbjct: 151 IIHRDIKDENIVIAED---FTIKLIDF--GSAAYLERG-------KLFYTFCGTIEYCAP 198
Query: 187 EIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E++  N + GPE        ++WSLGV +Y L+    PF
Sbjct: 199 EVLMGNPYRGPE-------LEMWSLGVTLYTLVFEENPF 230

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRD+K ENI+         +KL DF  GS               L  T  G+ E+ 
Sbjct: 149 KDIIHRDIKDENIVIAED---FTIKLIDF--GSAAYLERG-------KLFYTFCGTIEYC 196
Query: 312 APEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++  N + GPE        ++WSLGV +Y L+    PF
Sbjct: 197 APEVLMGNPYRGPE-------LEMWSLGVTLYTLVFEENPF 230

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 146 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 195 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 234

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKPEN+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 127 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
           HP+ 
Sbjct: 287 HPFF 290

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           I HRDL+  NI     D+ +PV  K+ DF L        SVHS   + LL    G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE +    G E   Y ++ D +S  +++Y +L G  PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           I HRDL+  NI     D+ +PV  K+ DF L        SVHS   + LL    G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE +    G E   Y ++ D +S  +++Y +L G  PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 131 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G +   Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 178 APEIL---LGXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 233 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 420 HPWI 423
           HP+ 
Sbjct: 291 HPFF 294

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 143 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 186
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 187 MAPEVI------QQSAYDSKADIWSLGITAIELAKGEPP 219

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 143 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 186
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 187 MAPEVI------QQSAYDSKADIWSLGITAIELAKGEPP 219

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKPEN+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 126 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
           HP+ 
Sbjct: 286 HPFF 289

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKPEN+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 125 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
           HP+ 
Sbjct: 285 HPFF 288

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKPEN+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 147 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 196 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 235

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 170 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 218
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 219 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 258

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKPEN+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 125 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
           HP+ 
Sbjct: 285 HPFF 288

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G +   Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LGXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS---PLATPLLLT 303
            HS+   I HRDLKP NIL   P+    +K    D G   K     HS       P    
Sbjct: 134 LHSL--NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP---- 187
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR 362
             G+  ++APE+++     E   Y    D++S G V Y ++  G  PF    G+    Q 
Sbjct: 188 --GTEGWIAPEMLSEDC-KENPTYT--VDIFSAGCVFYYVISEGSHPF----GKSLQRQA 238
Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
                AC     H         PE     I   A++LI +++  D +KR SA  VLKHP+
Sbjct: 239 NILLGACSLDCLH---------PEKHEDVI---ARELIEKMIAMDPQKRPSAKHVLKHPF 286
Query: 423 I 423
Sbjct: 287 F 287

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 221 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 269
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 270 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 309

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WISTAGTAHRPLVTPQVIRRNQS--ARELSSFAESAMSANRVI 462
           + +     H P   P    R+QS  +R+L      +++ + VI
Sbjct: 307 YFA---QYHDPDDEPVADPRDQSFESRDLLIDEWKSLTYDEVI 346

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 49/226 (21%)
Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H   QG+A        HRD+K  NIL   P     VKL DF  GS      S+ +P    
Sbjct: 161 HGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDF--GSA-----SIMAPANXF 210
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                VG+  +MAPE++ A    +   YD + D+WSLG+    L    PP +        
Sbjct: 211 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 255
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                        L+H  Q        G W   S+  ++ +   L K  + R ++  +LK
Sbjct: 256 -------MNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305
Query: 420 HPWISTAGTAHRPLVTPQVIRRNQSA-RELSSFAESAMSANRVILQ 464
           H ++        P V   +I+R + A REL +     M   +++ Q
Sbjct: 306 HRFVL---RERPPTVIMDLIQRTKDAVRELDNLQYRKM--KKILFQ 346

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 176 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 224
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 225 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 178 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 226
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 227 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 266

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 155 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 203
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 204 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 243

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 180 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 228
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 229 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 268

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           GI HRD+KP+N+L + PD  + +KLCDF  GS  +      +       ++ + S  + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           PE++       A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTP-VGSAEF 310
            + HRDLKP N+L    +    +K+CDF L   I  + + +S P      +T  V +  +
Sbjct: 132 NVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF------------YGNCG--- 355
            APE++       ++ Y +  D+WS G ++  L    P F            +G  G   
Sbjct: 189 RAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
            D   +  E+  A + I   S+        E  +  ++ +  DL++R+LV D  KR++A 
Sbjct: 244 SDNDLRCIESPRAREYI--KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 416 SVLKHPWIST 425
             L+HP++ T
Sbjct: 302 EALEHPYLQT 311

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTP-VGSAEF 310
            + HRDLKP N+L    +    +K+CDF L   I  + + +S P      +T  V +  +
Sbjct: 132 NVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF------------YGNCG--- 355
            APE++       ++ Y +  D+WS G ++  L    P F            +G  G   
Sbjct: 189 RAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
            D   +  E+  A + I   S+        E  +  ++ +  DL++R+LV D  KR++A 
Sbjct: 244 SDNDLRCIESPRAREYI--KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 416 SVLKHPWIST 425
             L+HP++ T
Sbjct: 302 EALEHPYLQT 311

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 47/219 (21%)
Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H   QG+A        HRD+K  NIL   P     VKL DF  GS      S+ +P    
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDF--GSA-----SIMAPANXF 171
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                VG+  +MAPE++ A    +   YD + D+WSLG+    L    PP +        
Sbjct: 172 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 216
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                        L+H  Q        G W   S+  ++ +   L K  + R ++  +LK
Sbjct: 217 -------MNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 266
Query: 420 HPWISTAGTAHRPLVTPQVIRRNQSA-RELSSFAESAMS 457
           H ++        P V   +I+R + A REL +     M 
Sbjct: 267 HRFVLRERP---PTVIMDLIQRTKDAVRELDNLQYRKMK 302

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWI 423
           HP+ 
Sbjct: 283 HPFF 286

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWIS 424
           HP+  
Sbjct: 284 HPFFQ 288

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWI 423
           HP+ 
Sbjct: 283 HPFF 286

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWIS 424
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 131 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 178 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 233 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 420 HPWI 423
           HP+ 
Sbjct: 291 HPFF 294

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KP N+L    + L  VK+CDF + SG   ++   +  A        G   +MAP
Sbjct: 175 VIHRDVKPSNVLI---NALGQVKMCDFGI-SGYLVDSVAKTIDA--------GCKPYMAP 222
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +N  +     GY  + D+WSLG+ +  L     P+         W  G      +++ 
Sbjct: 223 ERINPELN--QKGYSVKSDIWSLGITMIELAILRFPY-------DSW--GTPFQQLKQV- 270
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              +++     P  ++S    E  D   + L K++++R +   +++HP+ +
Sbjct: 271 ---VEEPSPQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELMQHPFFT 315

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 125 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
           HP+ 
Sbjct: 285 HPFF 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWI 423
           HP+ 
Sbjct: 283 HPFF 286

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-----CGWQRGETCH 367
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G     +  
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 368 ACQEILFHSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
               I+    +      P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
           P++ 
Sbjct: 311 PYLE 314

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 128 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 174
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 175 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 230 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 420 HPWIS 424
           HP+  
Sbjct: 288 HPFFQ 292

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   G++   +  +   TP          
Sbjct: 171 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP---------N 218
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+          Y    D W+LGV+++ ++ G  PF      D            
Sbjct: 219 YIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 266
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWI 423
           ++ LF  I +     P     ++S +A  +++  L KD ++RL        A +  HP+ 
Sbjct: 267 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
Query: 424 STA 426
Sbjct: 323 RNV 325

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D  S +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--SELKILDFGLCRHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
           + +
Sbjct: 312 YFA 314

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
           + +
Sbjct: 312 YFA 314

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 157 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 202
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 203 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 257
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 258 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 422 WIS 424
           + +
Sbjct: 318 YFA 320

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
           HP+ 
Sbjct: 287 HPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 126 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
           HP+ 
Sbjct: 286 HPFF 289

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 170
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 170
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 35/172 (20%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRD+K  NIL    +     KL DF +   +    +  + +        +G+  +MAPE+
Sbjct: 148 HRDIKAGNILL---NTEGHAKLADFGVAGQLTDXMAKRNXV--------IGTPFWMAPEV 196
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI-LF 374
           +         GY+   D+WSLG+    +  G PP+                H  + I + 
Sbjct: 197 IQEI------GYNCVADIWSLGITAIEMAEGKPPY-------------ADIHPMRAIFMI 237
Query: 375 HSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
            +     +  PE  W   SD   D +++ LVK   +R +A  +L+HP++ +A
Sbjct: 238 PTNPPPTFRKPEL-W---SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 125 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
           HP+ 
Sbjct: 285 HPFF 288

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
           HP+ 
Sbjct: 287 HPFF 290

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 126 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
           HP+ 
Sbjct: 286 HPFF 289

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWIS 424
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 128 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 174
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+          Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 175 APEILLG-----CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 230 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 420 HPWI 423
           HP+ 
Sbjct: 288 HPFF 291

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 67/222 (30%)
Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           QD Y+L  + LG+G Y+ V   +NI    +  VKI+  +    ++++ +E++   + +G 
Sbjct: 36  QDDYQLVRK-LGRGKYSEVFEAINITNNEKVVVKILKPV---KKNKIKREIKILENLRGG 91
Query: 106 PNIIQLLEYYED-----------DENHERHKR---------------------------- 126
           PNII L +  +D             N+   K+                            
Sbjct: 92  PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
           I HRD+KP N++  H  +   ++L D+ L      G ++N               V S  
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           F  PE++  +       YD   D+WSLG ++  ++    PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
           HP+ 
Sbjct: 287 HPFF 290

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 28/104 (26%)
Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPV 178
            K+I HRD+K  N+L     +   VKL DF +      + IK NT V +P          
Sbjct: 143 EKKI-HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF--------- 189
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
               +MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 190 ----WMAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 223

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK NT V +P              +
Sbjct: 147 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 190
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 191 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 223

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
           HP+ 
Sbjct: 287 HPFF 290

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 125 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWIS 424
           HP+  
Sbjct: 285 HPFFQ 289

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
           HP+ 
Sbjct: 287 HPFF 290

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N+L  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 126 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
           HP+ 
Sbjct: 286 HPFF 289

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWIS 424
           HP+  
Sbjct: 283 HPFFQ 287

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 127 IAHRDLKPENILC---VHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
           I HRDLK  NIL    V    LS   +K+ DF L       T           ++  G+ 
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----------MSAAGAY 178
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
            +MAPE++ A M      + K  D+WS GV+++ LL G  PF G  G
Sbjct: 179 AWMAPEVIRASM------FSKGSDVWSYGVLLWELLTGEVPFRGIDG 219

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 254 IAHRDLKPENILC---VHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 308
           I HRDLK  NIL    V    LS   +K+ DF L       T           ++  G+ 
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----------MSAAGAY 178
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
            +MAPE++ A M      + K  D+WS GV+++ LL G  PF G  G
Sbjct: 179 AWMAPEVIRASM------FSKGSDVWSYGVLLWELLTGEVPFRGIDG 219

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H  ++ + +RDLKP NIL    D+   V++ D     G+  + S   P A+      VG
Sbjct: 305 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 351
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 352 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D     G+  + S   P A+      V
Sbjct: 304 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 350
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D        
Sbjct: 351 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 398
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                    H I +           + S E + L+  LL +D  +RL
Sbjct: 399 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 436

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + HRDLKP+N+L    +    +KL DF L    G+   T  H           V +  + 
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
           APEI+   +G     Y    D+WSLG +   ++     F G+   D  ++   T     E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +++    S+      FP+  W+          + ++ + L+ ++L  D  KR+SA + L 
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
           HP+ 
Sbjct: 284 HPFF 287

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H  ++ + +RDLKP NIL    D+   V++ D     G+  + S   P A+      VG
Sbjct: 306 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 352
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 353 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D     G+  + S   P A+      V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 351
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D        
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 399
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                    H I +           + S E + L+  LL +D  +RL
Sbjct: 400 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPL-LLTPVGSAEF 310
            + HRDLKP N+L    +    +K+CDF L   I  + + +S P      ++  V +  +
Sbjct: 132 NVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF------------YGNCG--- 355
            APE++       ++ Y +  D+WS G ++  L    P F            +G  G   
Sbjct: 189 RAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
            D   +  E+  A + I   S+        E  +  ++ +  DL++R+LV D  KR++A 
Sbjct: 244 SDNDLRCIESPRAREYI--KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 416 SVLKHPWIST 425
             L+HP++ T
Sbjct: 302 EALEHPYLQT 311

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 164 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 215
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 216 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 421 PWIS 424
           P++ 
Sbjct: 331 PYLE 334

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H  ++ + +RDLKP NIL    D+   V++ D     G+  + S   P A+      VG
Sbjct: 306 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 352
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 353 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D     G+  + S   P A+      V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 351
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D        
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 399
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                    H I +           + S E + L+  LL +D  +RL
Sbjct: 400 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H  ++ + +RDLKP NIL    D+   V++ D     G+  + S   P A+      VG
Sbjct: 306 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 352
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 353 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D     G+  + S   P A+      V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 351
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D        
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 399
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                    H I +           + S E + L+  LL +D  +RL
Sbjct: 400 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
           P++ 
Sbjct: 315 PYLE 318

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 150 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 194
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 195 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 247
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 307
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 308 HQSRLTAREAMEHPYFYTV 326

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
           + +
Sbjct: 314 YFA 316

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
           P++ 
Sbjct: 315 PYLE 318

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
           + +
Sbjct: 314 YFA 316

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 169 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 214
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 215 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 269
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 270 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 422 WIS 424
           + +
Sbjct: 330 YFA 332

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
           + +
Sbjct: 312 YFA 314

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 145 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 190
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 191 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 245
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 246 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 305
Query: 422 WIS 424
           + +
Sbjct: 306 YFA 308

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
           + +
Sbjct: 314 YFA 316

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           I HRDL+  NI     D+ +PV  K+ DF          SVHS   + LL    G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHS--VSGLL----GNFQWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE +    G E   Y ++ D +S  +++Y +L G  PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           I HRDL+  NI     D+ +PV  K+ DF          SVHS   + LL    G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHS--VSGLL----GNFQWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE +    G E   Y ++ D +S  +++Y +L G  PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
            +++ + GE LG GA+  V    N  T    A K+I+            E+E    C  H
Sbjct: 10  NEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-H 67
Query: 106 PNIIQLL-EYYEDDE----------------------------------------NHERH 124
           P I++LL  YY D +                                        N    
Sbjct: 68  PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEF 183
           KRI HRDLK  N+L         ++L DF + +  +K      S + TP          +
Sbjct: 128 KRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGTPY---------W 175
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE+V      + + YD + D+WSLG+ +  +    PP
Sbjct: 176 MAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPP 213

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPL 296
            C    E L     + I HRDLK  N+L         ++L DF + +  +K      S +
Sbjct: 114 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFI 170
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            TP          +MAPE+V      + + YD + D+WSLG+ +  +    PP +     
Sbjct: 171 GTPY---------WMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHH----- 215
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                     +  + +L  +           +WS    E +D ++  L K+   R SAA 
Sbjct: 216 --------ELNPMRVLLKIAKSDPPTLLTPSKWSV---EFRDFLKIALDKNPETRPSAAQ 264
Query: 417 VLKHPWIS--TAGTAHRPLV 434
           +L+HP++S  T+  A R LV
Sbjct: 265 LLEHPFVSSITSNKALRELV 284

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 266
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 267 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 422 WIS 424
           + +
Sbjct: 327 YFA 329

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
           + +
Sbjct: 309 YFA 311

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
           + +
Sbjct: 314 YFA 316

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
           P++ 
Sbjct: 311 PYLE 314

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
           + +
Sbjct: 309 YFA 311

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
           + +
Sbjct: 313 YFA 315

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
           + +
Sbjct: 312 YFA 314

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 19/103 (18%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
           RI HRDLKPENI+     Q  P +L     DLG   + +      L T      VG+ ++
Sbjct: 141 RIIHRDLKPENIVL----QPGPQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQY 189
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +APE++      E   Y    D WS G + +  + G+ PF  N
Sbjct: 190 LAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 217 LCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLS 273
           L  Y   + NC   CG + G       +I   L +  +  I HRDLKPENI+     Q  
Sbjct: 105 LRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL----QPG 157
Query: 274 PVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 331
           P +L     DLG   + +      L T      VG+ +++APE++      E   Y    
Sbjct: 158 PQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQYLAPELL------EQKKYTVTV 204
Query: 332 DLWSLGVVVYILLCGYPPFYGN 353
           D WS G + +  + G+ PF  N
Sbjct: 205 DYWSFGTLAFECITGFRPFLPN 226

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 165 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 210
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 211 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 265
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 266 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 325
Query: 422 WIS 424
           + +
Sbjct: 326 YFA 328

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 19/103 (18%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
           RI HRDLKPENI+     Q  P +L     DLG   + +      L T      VG+ ++
Sbjct: 142 RIIHRDLKPENIVL----QPGPQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQY 190
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +APE++      E   Y    D WS G + +  + G+ PF  N
Sbjct: 191 LAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 217 LCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLS 273
           L  Y   + NC   CG + G       +I   L +  +  I HRDLKPENI+     Q  
Sbjct: 106 LRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL----QPG 158
Query: 274 PVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 331
           P +L     DLG   + +      L T      VG+ +++APE++      E   Y    
Sbjct: 159 PQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQYLAPELL------EQKKYTVTV 205
Query: 332 DLWSLGVVVYILLCGYPPFYGN 353
           D WS G + +  + G+ PF  N
Sbjct: 206 DYWSFGTLAFECITGFRPFLPN 227

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 149 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 193
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 194 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 246
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 247 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 306
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 307 HQSRLTAREAMEHPYFYTV 325

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 266
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 422 WIS 424
           + +
Sbjct: 327 YFA 329

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 143 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 189 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 243
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 244 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 422 WIS 424
           + +
Sbjct: 304 YFA 306

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 158 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 204 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 258
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 422 WIS 424
           + +
Sbjct: 319 YFA 321

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 158 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 204 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 258
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 422 WIS 424
           + +
Sbjct: 319 YFA 321

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 158 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 204 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 258
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 422 WIS 424
           + +
Sbjct: 319 YFA 321

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
           + +
Sbjct: 309 YFA 311

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 143 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 189 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 243
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 244 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 422 WIS 424
           + +
Sbjct: 304 YFA 306

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 144 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 189
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 190 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 244
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 245 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 304
Query: 422 WIS 424
           + +
Sbjct: 305 YFA 307

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 156 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 200
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 201 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 253
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 254 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 313
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 314 HQSRLTAREAMEHPYFYTV 332

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
            +++ + GE LG GA+  V    N  T    A K+I+            E+E    C  H
Sbjct: 18  NEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-H 75
Query: 106 PNIIQLL-EYYEDDE----------------------------------------NHERH 124
           P I++LL  YY D +                                        N    
Sbjct: 76  PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEF 183
           KRI HRDLK  N+L         ++L DF + +  +K      S + TP          +
Sbjct: 136 KRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGTPY---------W 183
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE+V      + + YD + D+WSLG+ +  +    PP
Sbjct: 184 MAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPP 221

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPL 296
            C    E L     + I HRDLK  N+L         ++L DF + +  +K      S +
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFI 178
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            TP          +MAPE+V      + + YD + D+WSLG+ +  +    PP +     
Sbjct: 179 GTPY---------WMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHH----- 223
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                     +  + +L  +           +WS    E +D ++  L K+   R SAA 
Sbjct: 224 --------ELNPMRVLLKIAKSDPPTLLTPSKWSV---EFRDFLKIALDKNPETRPSAAQ 272
Query: 417 VLKHPWIS--TAGTAHRPLV 434
           +L+HP++S  T+  A R LV
Sbjct: 273 LLEHPFVSSITSNKALRELV 292

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 146 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 198 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 421 PWIS 424
           P+++
Sbjct: 313 PYLA 316

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
           + +
Sbjct: 313 YFA 315

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLXEXVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
           P++ 
Sbjct: 315 PYLE 318

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 149 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLXEXVATRWYRA 200
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 201 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 421 PWIS 424
           P++ 
Sbjct: 316 PYLE 319

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 40/193 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G+ HRDL P NIL    + ++   +CDF+L              A       V    +
Sbjct: 152 EAGVVHRDLHPGNILLADNNDIT---ICDFNLAR---------EDTADANKTHYVTHRWY 199
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG--------EDCGWQR 362
            APE+V  F      G+ K  D+WS G V+  +      F G+          E  G  +
Sbjct: 200 RAPELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 363 GETCHACQEILFHSIQQGHY------DFPEGEWSTISDEAK----DLIRRLLVKDARKRL 412
            E       ++F S     Y      + P   W+ +   A     DLI ++L  + ++R+
Sbjct: 255 IEDV-----VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 413 SAASVLKHPWIST 425
           S    L+HP+  +
Sbjct: 310 STEQALRHPYFES 322

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 156 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 201
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 202 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 256
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 257 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 316
Query: 422 WIS 424
           + +
Sbjct: 317 YFA 319

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 40/193 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G+ HRDL P NIL    + ++   +CDF+L              A       V    +
Sbjct: 152 EAGVVHRDLHPGNILLADNNDIT---ICDFNLAR---------EDTADANKTHYVTHRWY 199
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG--------EDCGWQR 362
            APE+V  F      G+ K  D+WS G V+  +      F G+          E  G  +
Sbjct: 200 RAPELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 363 GETCHACQEILFHSIQQGHY------DFPEGEWSTISDEAK----DLIRRLLVKDARKRL 412
            E       ++F S     Y      + P   W+ +   A     DLI ++L  + ++R+
Sbjct: 255 IEDV-----VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 413 SAASVLKHPWIST 425
           S    L+HP+  +
Sbjct: 310 STEQALRHPYFES 322

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 157 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 202
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 203 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 257
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 258 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 422 WIS 424
           + +
Sbjct: 318 YFA 320

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 150 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 194
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 195 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 247
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 307
Query: 408 ARKRLSAASVLKHPWISTA 426
            + RL+A   ++HP+  T 
Sbjct: 308 HQSRLTAREAMEHPYFYTV 326

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
           + +
Sbjct: 303 YFA 305

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 165 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 210
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 211 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 265
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 266 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 325
Query: 422 WIS 424
           + +
Sbjct: 326 YFA 328

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   G++   +      TP          
Sbjct: 128 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------N 175
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+          Y    D W+LGV+++ ++ G  PF      D            
Sbjct: 176 YIAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 223
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVLKHPWI 423
           ++ LF  I +     P     ++S +A  +++  L KD ++RL        A +  HP+ 
Sbjct: 224 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
Query: 424 STA 426
Sbjct: 280 RNV 282

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
           + +
Sbjct: 303 YFA 305

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   G++   +      TP          
Sbjct: 124 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------N 171
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+          Y    D W+LGV+++ ++ G  PF      D            
Sbjct: 172 YIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 219
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVLKHPWI 423
           ++ LF  I +     P     ++S +A  +++  L KD ++RL        A +  HP+ 
Sbjct: 220 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
Query: 424 STA 426
Sbjct: 276 RNV 278

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
           + +
Sbjct: 303 YFA 305

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 253 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
           + +
Sbjct: 313 YFA 315

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 45/174 (25%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK N  V +P              +
Sbjct: 139 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 182
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      + S YD + D+WSLG+    L  G PP                 H  +
Sbjct: 183 MAPEVI------KQSAYDFKADIWSLGITAIELAKGEPP-------------NSDLHPMR 223
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            +LF  I +      EG+ S      K+ +   L KD R R +A  +LKH +I+
Sbjct: 224 -VLF-LIPKNSPPTLEGQHSK---PFKEFVEACLNKDPRFRPTAKELLKHKFIT 272

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
           ++GI +RDLK +N+L    D    +KL D+ +   G++   +      TP          
Sbjct: 139 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------N 186
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++APEI+          Y    D W+LGV+++ ++ G  PF      D            
Sbjct: 187 YIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 234
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWI 423
           ++ LF  I +     P     ++S +A  +++  L KD ++RL        A +  HP+ 
Sbjct: 235 EDYLFQVILEKQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
Query: 424 STA 426
Sbjct: 291 RNV 293

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        +             V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT-----------GXVATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
           P++ 
Sbjct: 311 PYLE 314

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 142 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 194 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 421 PWIS 424
           P++ 
Sbjct: 309 PYLE 312

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+       A  Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIM-----LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
           P++ 
Sbjct: 315 PYLE 318

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G  HRD+K  NIL     +   V++ DF + +   F  +        +  T VG+  +
Sbjct: 139 KNGQIHRDVKAGNILL---GEDGSVQIADFGVSA---FLATGGDITRNKVRKTFVGTPCW 192
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      +  GYD + D+WS G+    L  G  P++               +   
Sbjct: 193 MAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPYHK--------------YPPM 233
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEA--------KDLIRRLLVKDARKRLSAASVLKHPW 422
           ++L  ++Q    D P  E      E         + +I   L KD  KR +AA +L+H +
Sbjct: 234 KVLMLTLQN---DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
Query: 423 ISTA 426
              A
Sbjct: 291 FQKA 294

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFYLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 152 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 203
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 204 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 259 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 421 PWIS 424
           P++ 
Sbjct: 319 PYLE 322

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
           P++ 
Sbjct: 311 PYLE 314

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 164 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 215
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 216 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 421 PWIS 424
           P++ 
Sbjct: 331 PYLE 334

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 146 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 198 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 421 PWIS 424
           P++ 
Sbjct: 313 PYLE 316

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 149 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 200
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 201 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 421 PWIS 424
           P++ 
Sbjct: 316 PYLE 319

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 150 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 201
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 202 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 257 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 316
Query: 421 PWIS 424
           P++ 
Sbjct: 317 PYLE 320

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 141 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 192
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 193 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 248 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 307
Query: 421 PWIS 424
           P++ 
Sbjct: 308 PYLE 311

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
           P++ 
Sbjct: 315 PYLE 318

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G  HRD+K  NIL     +   V++ DF + +   F  +        +  T VG+  +
Sbjct: 134 KNGQIHRDVKAGNILL---GEDGSVQIADFGVSA---FLATGGDITRNKVRKTFVGTPCW 187
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      +  GYD + D+WS G+    L  G  P++               +   
Sbjct: 188 MAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPYHK--------------YPPM 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEA--------KDLIRRLLVKDARKRLSAASVLKHPW 422
           ++L  ++Q    D P  E      E         + +I   L KD  KR +AA +L+H +
Sbjct: 229 KVLMLTLQN---DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
Query: 423 ISTA 426
              A
Sbjct: 286 FQKA 289

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L                  +   V +  + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDE-----------MXGXVATRWYRAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 266
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 422 WIS 424
           + +
Sbjct: 327 YFA 329

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L          +           V +  + AP
Sbjct: 169 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMXGY-----------VATRWYRAP 214
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 215 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 269
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 270 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 422 WIS 424
           + +
Sbjct: 330 YFA 332

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
           P++ 
Sbjct: 315 PYLE 318

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
           HRD+K  N+L     +   VKL DF +      + IK N  V +P              +
Sbjct: 142 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 185
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 186 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 218

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK N  V +P              +
Sbjct: 142 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 185
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 186 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 218

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + HRD+KP N+L    + L  VK+CDF + SG   +       A        G   +MAP
Sbjct: 131 VIHRDVKPSNVLI---NALGQVKMCDFGI-SGYLVDDVAKDIDA--------GCKPYMAP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +N  +  +  GY  + D+WSLG+ +  L     P+         W  G      +++ 
Sbjct: 179 ERINPELNQK--GYSVKSDIWSLGITMIELAILRFPY-------DSW--GTPFQQLKQV- 226
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              +++     P  ++S    E  D   + L K++++R +   +++HP+ +
Sbjct: 227 ---VEEPSPQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELMQHPFFT 271

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ D+ L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDYGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        +             V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI     +  IAHRDLK +NIL     Q      C  DLG  +     +HS    
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTN 168
Query: 299 PLLLTP---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
            L +     VG+  +MAPE+++  +  +     KR D+W+ G+V++          I+  
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
Query: 346 GYPPFY 351
             PPFY
Sbjct: 229 YKPPFY 234

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
           HRD+K  N+L     +   VKL DF +      + IK N  V +P              +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 170
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
           HRD+K  N+L     +   VKL DF +      + IK N  V +P              +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 170
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
           MAPE++      + S YD + D+WSLG+    L  G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI     +  IAHRDLK +NIL     Q      C  DLG  +     +HS    
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTN 168
Query: 299 PLLLTP---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
            L +     VG+  +MAPE+++  +  +     KR D+W+ G+V++          I+  
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
Query: 346 GYPPFY 351
             PPFY
Sbjct: 229 YKPPFY 234

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        +             V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 47/196 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
           GI HRD+KP N++  H  +   ++L D+ L      G ++N               V S 
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            F  PE++  +       YD   D+WSLG ++  ++    PF+   G D   Q       
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
              E L+  I + + +                W           +S EA D + +LL  D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWI 423
            + RL+A   ++HP+ 
Sbjct: 309 HQSRLTAREAMEHPYF 324

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 41/190 (21%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK----FNTSV 292
           +TC A Q +  H  +  I HRDLK EN+L  +      +KLCDF   + I     ++ S 
Sbjct: 144 QTCRAVQHM--HRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSA 198
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY--DKRCDLWSLGVVVYILLCGYPPF 350
                    +T   +  +  PEI++ +     S +   ++ D+W+LG ++Y+L     PF
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLY-----SNFPIGEKQDIWALGCILYLLCFRQHPF 253
Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFP--EGEWSTISDEAKDLIRRLLVKDA 408
                ED    R              I  G Y  P  + +++        LIR +L  + 
Sbjct: 254 -----EDGAKLR--------------IVNGKYSIPPHDTQYTVF----HSLIRAMLQVNP 290
Query: 409 RKRLSAASVL 418
            +RLS A V+
Sbjct: 291 EERLSIAEVV 300

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        +             V +  + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
           + +
Sbjct: 303 YFA 305

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 79/209 (37%), Gaps = 42/209 (20%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNT 290
           WQ  +    C E         I HRDLKP+N+L     QL   KL DF L    GI  NT
Sbjct: 115 WQLLQGLAFCHE-------NKILHRDLKPQNLLINKRGQL---KLGDFGLARAFGIPVNT 164
Query: 291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
                       + V +  + AP+++   MG  +  Y    D+WS G ++  ++ G P F
Sbjct: 165 ----------FSSEVVTLWYRAPDVL---MG--SRTYSTSIDIWSCGCILAEMITGKPLF 209
Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD---------------E 395
            G   E+      +      E L+ S+ +     P  +     D                
Sbjct: 210 PGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGN 269
Query: 396 AKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             D +  LL  +   RLSA   L HPW +
Sbjct: 270 LMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI     +  IAHRDLK +NIL     Q      C  DLG  +     +HS    
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTN 197
Query: 299 PLLLTP---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
            L +     VG+  +MAPE+++  +  +     KR D+W+ G+V++          I+  
Sbjct: 198 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 257
Query: 346 GYPPFY 351
             PPFY
Sbjct: 258 YKPPFY 263

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+CDF L    +     H    T  L   V +  + A
Sbjct: 142 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G      QE
Sbjct: 194 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
            L    +++  +Y    P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 421 PWIS 424
           P++ 
Sbjct: 309 PYLE 312

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I HRDLKP N L V+ D       C+   LG G+  +T          +   V +  + A
Sbjct: 146 IIHRDLKPSN-LAVNED-------CELKILGFGLARHTDDE-------MTGYVATRWYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PEI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E
Sbjct: 191 PEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                      +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 421 PWIS 424
            + +
Sbjct: 306 AYFA 309

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+H+ I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 131 REKHQ-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 176
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE +      + + Y  + D+WS+G+ +  L  G  P 
Sbjct: 177 RSYMAPERL------QGTHYSVQSDIWSMGLSLVELAVGRYPI 213

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +MAP
Sbjct: 136 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMAP 182
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  L  G  P 
Sbjct: 183 ERL------QGTHYSVQSDIWSMGLSLVELAVGRYPI 213

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ DF L        + +           V +  + AP
Sbjct: 175 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 220
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG----NCGEDCGWQRGE-TCHA 368
           EI+  +M      Y+   D+WS+G ++  LL G   F G    N  +      G      
Sbjct: 221 EIMLNWMH-----YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV 275
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDE-------AKDLIRRLLVKDARKRLSAASVLKHP 421
              +  H  +      P+      +D        A DL+ ++LV D  KR++A+  L HP
Sbjct: 276 ISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHP 335
Query: 422 WIS 424
           + S
Sbjct: 336 YFS 338

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 233 WQRGETCHACQEILFHSIQ-------QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG 285
           +QRG   H  + I + ++Q           HRD+KPENIL     + S +KLCDF     
Sbjct: 95  YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARL 151
Query: 286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
           +   +  +           V +  + +PE++        + Y    D+W++G V   LL 
Sbjct: 152 LTGPSDYYD--------DEVATRWYRSPELLVG-----DTQYGPPVDVWAIGCVFAELLS 198
Query: 346 GYPPFYGNCGEDCGW----QRGETCHACQEILFHSIQQGHYDFPEGE--------WSTIS 393
           G P + G    D  +      G+     Q++   +        P+ E        +  IS
Sbjct: 199 GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNIS 258
Query: 394 DEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
             A  L++  L  D  +RL+   +L HP+   
Sbjct: 259 YPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 42/217 (19%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + I HRD+K +NI          V+L DF +   +  N++V    A       +
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKD---GTVQLGDFGIARVL--NSTVELARAC------I 186
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +++PEI       E   Y+ + D+W+LG V+Y L          C     ++ G  
Sbjct: 187 GTPYYLSPEIC------ENKPYNNKSDIWALGCVLYEL----------CTLKHAFEAGSM 230
Query: 366 CHACQEILFHSI--QQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
            +   +I+  S      HY +          + + L+ +L  ++ R R S  S+L+  +I
Sbjct: 231 KNLVLKIISGSFPPVSLHYSY----------DLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
Query: 424 STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
           +         ++PQ+I      +  S F    + A R
Sbjct: 281 A---KRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKR 314

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 148 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +M+PE +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 194 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 153 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 199
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 200 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 183 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 228
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +M+PE +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 229 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 188 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 234
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 235 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +M+PE +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +M+PE +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H R+  I HR+LK  N+L    D+   VK+CDF L S +K +T + S  A        G+
Sbjct: 154 HNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGL-SRLKASTFLSSKSAA-------GT 202
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
            E+MAPE++      E S  +++ D++S GV+++ L     P +GN  
Sbjct: 203 PEWMAPEVLRD----EPS--NEKSDVYSFGVILWELATLQQP-WGNLN 243

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +M+PE +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            E+HK I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +M+PE +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +  + VG+  +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           E +      + + Y  + D+WS+G+ +  +  G  P 
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H R+  I HRDLK  N+L    D+   VK+CDF L S +K +  + S  A        G+
Sbjct: 154 HNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGL-SRLKASXFLXSKXAA-------GT 202
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
            E+MAPE++      E S  +++ D++S GV+++ L     P +GN  
Sbjct: 203 PEWMAPEVLRD----EPS--NEKSDVYSFGVILWELATLQQP-WGNLN 243

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 18/109 (16%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            H+    I HRDLK  N+L    D+   VK+CDF L S +K +  + S  A        G
Sbjct: 153 LHNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGL-SRLKASXFLXSKXAA-------G 201
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
           + E+MAPE++      E S  +++ D++S GV+++ L     P +GN  
Sbjct: 202 TPEWMAPEVLRD----EPS--NEKSDVYSFGVILWELATLQQP-WGNLN 243

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRDLKP N+L    +    +K+ DF L    +     H    T  L   V +  + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTXDLKIXDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-----CGWQRGETCH 367
           PEI+       + GY K  D+WS+G ++  +L   P F G    D      G     +  
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 368 ACQEILFHSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
               I+    +      P      W+ +      +A DL+ ++L  +  KR+     L H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
           P++ 
Sbjct: 311 PYLE 314

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRD+KP NIL    +    +KLCDF           V   L   +    VG+  +M+P
Sbjct: 129 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDEMANEFVGTRSYMSP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E +      + + Y  + D+WS+G+ +  +  G  P                  A  E+L
Sbjct: 176 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYP--------------RPPMAIFELL 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
            + + +     P   +S    E +D + + L+K+  +R     ++ H +I  +
Sbjct: 216 DYIVNEPPPKLPSAVFSL---EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 265

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           RI H DLKPENIL     + S +K+ DF  GS    +  V+         T + S  + A
Sbjct: 220 RIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
           PE++        + Y    D+WSLG ++  LL GYP      GED G Q
Sbjct: 268 PEVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I H DLKPENIL     + S +K+ DF  GS    +  V+         T + S  + AP
Sbjct: 221 IIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRAP 268
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 361
           E++        + Y    D+WSLG ++  LL GYP      GED G Q
Sbjct: 269 EVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           RI H DLKPENIL     + S +K+ DF  GS    +  V+         T + S  + A
Sbjct: 220 RIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
           PE++        + Y    D+WSLG ++  LL GYP      GED G Q
Sbjct: 268 PEVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I H DLKPENIL     + S +K+ DF  GS    +  V+         T + S  + AP
Sbjct: 221 IIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRAP 268
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 361
           E++        + Y    D+WSLG ++  LL GYP      GED G Q
Sbjct: 269 EVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I HRDLKP N L V+ D       C+   L +G+  +T          +   V +  + A
Sbjct: 146 IIHRDLKPSN-LAVNED-------CELKILDAGLARHTDDE-------MTGYVATRWYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PEI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E
Sbjct: 191 PEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                      +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 421 PWIS 424
            + +
Sbjct: 306 AYFA 309

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 67/261 (25%)
Query: 205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF-HSIQQGIAHRDLKPEN 263
           +L  L    +I   G+ PF  +      +Q       C+ + F HS    + H DLKPEN
Sbjct: 97  ELLGLSTYDFIKENGFLPFRLDHIRKMAYQ------ICKSVNFLHS--NKLTHTDLKPEN 148
Query: 264 ILCVHPDQ---------------LSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           IL V  D                ++P +K+ DF  GS   ++   HS L        V +
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHSTL--------VST 197
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF-YGNCGEDCGWQRGETC 366
             + APE++ A       G+ + CD+WS+G ++     G+  F   +  E          
Sbjct: 198 RHYRAPEVILAL------GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAK------------------------DLIRR 402
              + ++  + ++ ++     +W   S   +                        DLI++
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQK 311
Query: 403 LLVKDARKRLSAASVLKHPWI 423
           +L  D  KR++    LKHP+ 
Sbjct: 312 MLEYDPAKRITLREALKHPFF 332

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D  + VK+ DF L +     +  H            GS  +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      +++ Y  + D+++ G+V+Y L+ G  P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRDLK  NI  +H D  + VK+ DF L +     +  H            GS  +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++      +++ Y  + D+++ G+V+Y L+ G  P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 120 NHERHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
           NH R   I HR++KP NI+  +  D  S  KL DF     ++ +            ++  
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVSLY 176
Query: 179 GSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           G+ E++ P++             Y    DLWS+GV  Y    G  PF
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 248 HSIQQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           H  + GI HR++KP NI+  +  D  S  KL DF     ++ +            ++  G
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVSLYG 177
Query: 307 SAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           + E++ P++             Y    DLWS+GV  Y    G  PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D  + VK+ DF L +     +  H            GS  +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      +++ Y  + D+++ G+V+Y L+ G  P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRDLK  NI  +H D  + VK+ DF L +     +  H            GS  +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++      +++ Y  + D+++ G+V+Y L+ G  P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA-TPLLLT---PVGS 307
           +G+ HRDLKP NI     D    VK+ DF L + +  +    + L   P   T    VG+
Sbjct: 183 KGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGT 239
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
             +M+PE ++       + Y  + D++SLG++++ LL  +
Sbjct: 240 KLYMSPEQIH------GNNYSHKVDIFSLGLILFELLYSF 273

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 228 GEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
           G      R      C  +LF +  +  I H DLKPENIL  +P + S +K+ DF  GS  
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR-SAIKIVDF--GSSC 209
Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
           +    ++  + +           + +PE++          YD   D+WSLG ++  +  G
Sbjct: 210 QLGQRIYQXIQSRF---------YRSPEVLLGM------PYDLAIDMWSLGCILVEMHTG 254
Query: 347 YPPFYG 352
            P F G
Sbjct: 255 EPLFSG 260

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKP N L V+ D    +K+ D  L        + +           V +  + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDRGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
           EI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E 
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
                     +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H 
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
           + +
Sbjct: 307 YFA 309

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 228 GEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
           G      R      C  +LF +  +  I H DLKPENIL  +P + S +K+ DF  GS  
Sbjct: 134 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR-SAIKIVDF--GSSC 190
Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
           +    ++  + +           + +PE++          YD   D+WSLG ++  +  G
Sbjct: 191 QLGQRIYQXIQSRF---------YRSPEVLLGM------PYDLAIDMWSLGCILVEMHTG 235
Query: 347 YPPFYG 352
            P F G
Sbjct: 236 EPLFSG 241

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D  + VK+ DF L +     +  H            GS  +M
Sbjct: 127 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 177
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      +++ Y  + D+++ G+V+Y L+ G  P+
Sbjct: 178 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 213

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRDLK  NI  +H D  + VK+ DF L +     +  H            GS  +M
Sbjct: 127 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++      +++ Y  + D+++ G+V+Y L+ G  P+
Sbjct: 178 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 213

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE-- 309
           +G AHRDLKP NIL    D+  PV +   DLGS       +H   +   L     +A+  
Sbjct: 153 KGYAHRDLKPTNILL--GDEGQPVLM---DLGS--MNQACIHVEGSRQALTLQDWAAQRC 205
Query: 310 ---FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              + APE+   F        D+R D+WSLG V+Y ++ G  P+      D  +Q+G++ 
Sbjct: 206 TISYRAPEL---FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY------DMVFQKGDSV 256

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
            QG  N I  L        HE H    HRD+K  NIL    D+    K+ DF L  +  K
Sbjct: 139 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 185
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
           F  +V       +    VG+  +MAPE +   + P       + D++S GVV+  ++ G 
Sbjct: 186 FAQTV-------MXXRIVGTTAYMAPEALRGEITP-------KSDIYSFGVVLLEIITGL 231
Query: 221 P 221
           P
Sbjct: 232 P 232

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 314
           HRD+K  NIL    D+    K+ DF L  +  KF  +V       +    VG+  +MAPE
Sbjct: 156 HRDIKSANILL---DEAFTAKISDFGLARASEKFAQTV-------MXXRIVGTTAYMAPE 205
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
            +   + P       + D++S GVV+  ++ G P
Sbjct: 206 ALRGEITP-------KSDIYSFGVVLLEIITGLP 232

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 117 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 162
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 163 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 207
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 208 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 242
Query: 408 ARKRLSAASVLKHPWIS 424
              R +   +  HPW+ 
Sbjct: 243 PSDRPTFEEIQNHPWMQ 259

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 164 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 209
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 210 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 254
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 255 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 289
Query: 408 ARKRLSAASVLKHPWIS 424
              R +   +  HPW+ 
Sbjct: 290 PSDRPTFEEIQNHPWMQ 306

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
            HS++  I HRDLKP+NIL     + +         +++   D G   K ++   S    
Sbjct: 131 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR-CDLWSLG-VVVYILLCGYPPFYGNCGE 356
             L  P G++ + APE++      +      R  D++S+G V  YIL  G  PF      
Sbjct: 189 --LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD-----EAKDLIRRLLVKDARKR 411
           +    RG                    F   E   + D     EA DLI +++  D  KR
Sbjct: 247 ESNIIRGI-------------------FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 412 LSAASVLKHP 421
            +A  VL+HP
Sbjct: 288 PTAMKVLRHP 297

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I HRDLKP N L V+ D       C+   L  G+  +T          +   V +  + A
Sbjct: 146 IIHRDLKPSN-LAVNED-------CELKILDGGLARHTDDE-------MTGYVATRWYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
           PEI+  +M      Y++  D+WS+G ++  LL G   F G    D         G    E
Sbjct: 191 PEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
                      +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 421 PWIS 424
            + +
Sbjct: 306 AYFA 309

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 33/186 (17%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
            + HRD+KP N+L    D    +KLCDF  GS  K + S  +       +  + S  + A
Sbjct: 151 NVCHRDIKPHNVLVNEAD--GTLKLCDF--GSAKKLSPSEPN-------VAYICSRYYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--CGEDCGWQRGETCHACQ 370
           PE++          Y    D+WS+G +   ++ G P F G+   G+     R   C   +
Sbjct: 200 PELIFG-----NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC-PSR 253
Query: 371 EILFHSIQQGH-----YDFPEGEWSTI--------SDEAKDLIRRLLVKDARKRLSAASV 417
           E+L   +   H     Y+     WS +        + EA DL+  LL     +R+     
Sbjct: 254 EVL-RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312
Query: 418 LKHPWI 423
           L HP+ 
Sbjct: 313 LCHPYF 318

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 121 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 166
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 167 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 211
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 212 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 246
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 247 PSDRPTFEEIQNHPWM 262

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 120 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 165
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 166 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 210
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 211 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 245
Query: 408 ARKRLSAASVLKHPWIS 424
              R +   +  HPW+ 
Sbjct: 246 PSDRPTFEEIQNHPWMQ 262

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 121 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 166
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 167 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 211
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 212 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 246
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 247 PSDRPTFEEIQNHPWM 262

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 164 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 209
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 210 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 254
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 255 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 289
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 290 PSDRPTFEEIQNHPWM 305

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 137 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 182
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 183 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 227
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 228 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 262
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 263 PSDRPTFEEIQNHPWM 278

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 240 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 122 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 167
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 168 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 212
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 213 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 247
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 248 PSDRPTFEEIQNHPWM 263

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 136 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 181
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 182 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 226
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 227 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 261
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 262 PSDRPTFEEIQNHPWM 277

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 122 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 167
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 168 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 212
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 213 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 247
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 248 PSDRPTFEEIQNHPWM 263

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 53/194 (27%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
           WQ  E    C          G+ HRD+K ENIL      L+  +L   D GSG     +V
Sbjct: 117 WQVLEAVRHCH-------NXGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTV 165
Query: 293 HSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           ++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG  PF
Sbjct: 166 YTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 210
Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
             +                +EI+     +G   F +     +S E + LIR  L      
Sbjct: 211 EHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALRPSD 245
Query: 411 RLSAASVLKHPWIS 424
           R +   +  HPW+ 
Sbjct: 246 RPTFEEIQNHPWMQ 259

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 34/125 (27%)
Query: 242 CQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSG 285
           CQ + F      + H DLKPENIL V+ D                + + V++ DF  GS 
Sbjct: 147 CQAVKFLH-DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDF--GSA 203
Query: 286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
             F+   HS        T V +  + APE++         G+ + CD+WS+G +++    
Sbjct: 204 T-FDHEHHS--------TIVSTRHYRAPEVILEL------GWSQPCDVWSIGCIIFEYYV 248
Query: 346 GYPPF 350
           G+  F
Sbjct: 249 GFTLF 253

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 156 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 201
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 202 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 246
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 247 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 281
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 282 PSDRPTFEEIQNHPWM 297

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 122 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 167
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 168 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 212
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 213 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 247
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 248 PSDRPTFEEIQNHPWM 263

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH   EI     +  IAHRDLK +NIL            C  DLG  +KF +  +     
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT-----CCIADLGLAVKFISDTNEVDIP 202
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P   T VG+  +M PE+++  +           D++S G++++
Sbjct: 203 P--NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLKPENIL         VKL DF L     +  ++     TP+++T      + AP
Sbjct: 141 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----TPVVVT----LWYRAP 188
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E++        S Y    D+WS+G +   +    P F GN   D
Sbjct: 189 EVL------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPENIL         VKL DF L     +  ++     TP+++T      + AP
Sbjct: 141 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----TPVVVT----LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           E++        S Y    D+WS+G +   +    P F GN   D
Sbjct: 189 EVL------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
            QG  N I  L        HE H    HRD+K  NIL    D+    K+ DF L  +  K
Sbjct: 139 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 185
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
           F  +V       +    VG+  +MAPE +   + P       + D++S GVV+  ++ G 
Sbjct: 186 FAQTV-------MXSRIVGTTAYMAPEALRGEITP-------KSDIYSFGVVLLEIITGL 231
Query: 221 P 221
           P
Sbjct: 232 P 232

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 120 NHERHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
           NH R   I HR++KP NI+  +  D  S  KL DF     ++ +            +   
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVXLY 176
Query: 179 GSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           G+ E++ P++             Y    DLWS+GV  Y    G  PF
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 248 HSIQQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           H  + GI HR++KP NI+  +  D  S  KL DF     ++ +            +   G
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVXLYG 177
Query: 307 SAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           + E++ P++             Y    DLWS+GV  Y    G  PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 137 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 182
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 183 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 227
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 228 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 262
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 263 PSDRPTFEEIQNHPWM 278

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 169 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 214
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 215 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 259
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 260 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 294
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 295 PSDRPTFEEIQNHPWM 310

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 144 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 189
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 190 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 234
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 235 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 269
Query: 408 ARKRLSAASVLKHPWIS 424
              R +   +  HPW+ 
Sbjct: 270 PSDRPTFEEIQNHPWMQ 286

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 136 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 181
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 182 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 226
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 227 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 261
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 262 PSDRPTFEEIQNHPWM 277

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 137 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 182
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 183 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 227
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 228 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 262
Query: 408 ARKRLSAASVLKHPWIS 424
              R +   +  HPW+ 
Sbjct: 263 PXDRPTFEEIQNHPWMQ 279

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF-HSIQQGIAHRDLKPEN 263
           +L  L    +I   G+ PF  +      +Q       C+ + F HS    + H DLKPEN
Sbjct: 97  ELLGLSTYDFIKENGFLPFRLDHIRKMAYQ------ICKSVNFLHS--NKLTHTDLKPEN 148
Query: 264 ILCVHPDQ---------------LSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           IL V  D                ++P +K+ DF  GS   ++   HS L        V  
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHSTL--------VXX 197
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF-YGNCGEDCGWQRGETC 366
             + APE++ A       G+ + CD+WS+G ++     G+  F   +  E          
Sbjct: 198 RHYRAPEVILAL------GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAK------------------------DLIRR 402
              + ++  + ++ ++     +W   S   +                        DLI++
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQK 311
Query: 403 LLVKDARKRLSAASVLKHPWI 423
           +L  D  KR++    LKHP+ 
Sbjct: 312 MLEYDPAKRITLREALKHPFF 332

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 164 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 209
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 210 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 254
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+     +G   F +     +S E + LIR  L   
Sbjct: 255 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 289
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 290 PSDRPTFEEIQNHPWM 305

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL            C  DLG  ++ +++  +    
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 169
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P     VG+  +MAPE+++  +  +     KR D++++G+V +
Sbjct: 170 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 210

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL            C  DLG  ++ +++  +    
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 194
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P     VG+  +MAPE+++  +  +     KR D++++G+V +
Sbjct: 195 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL            C  DLG  ++ +++  +    
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 171
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P     VG+  +MAPE+++  +  +     KR D++++G+V +
Sbjct: 172 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 212

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K   HRD+KP+N L     + + V + DF L    + +TS H  +         G+A + 
Sbjct: 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR-DTSTHQHIPYRENKNLTGTARYA 180
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +   VN  +G E S   +R DL SLG V+   L G  P+ G
Sbjct: 181 S---VNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPWQG 215

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRD+KP+N L     + + V + DF L    + +TS H  +         G+A + +   
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR-DTSTHQHIPYRENKNLTGTARYAS--- 181
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           VN  +G E S   +R DL SLG V+   L G  P+ G
Sbjct: 182 VNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPWQG 215

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL            C  DLG  ++ +++  +    
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 174
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P     VG+  +MAPE+++  +  +     KR D++++G+V +
Sbjct: 175 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 215

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL            C  DLG  ++ +++  +    
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 207
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P     VG+  +MAPE+++  +  +     KR D++++G+V +
Sbjct: 208 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL            C  DLG  ++ +++  +    
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 168
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
           P     VG+  +MAPE+++  +  +     KR D++++G+V +
Sbjct: 169 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN---TSVHSPLATPLLLT-PVGS 307
           +G+ HRDLKP NI     D    VK+ DF L + +  +    +V +P+      T  VG+
Sbjct: 137 KGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
             +M+PE ++       + Y  + D++SLG++++ LL  YP
Sbjct: 194 KLYMSPEQIH------GNSYSHKVDIFSLGLILFELL--YP 226

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 27/120 (22%)
Query: 234 QRGETCHACQEI-LFHSIQQGI--------AHRDLKPENILCVHPDQLSPVKLCDFDLGS 284
           +RGE       + LF  I +G+         HRDLKP NI  V   Q   VK+ DF L +
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVT 184
Query: 285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
            +K +                G+  +M+PE ++      +  Y K  DL++LG+++  LL
Sbjct: 185 SLKNDGK---------RTRSKGTLRYMSPEQIS------SQDYGKEVDLYALGLILAELL 229

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/242 (21%), Positives = 92/242 (38%), Gaps = 62/242 (25%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDF 280
           + CHA +    H  Q  + H DLKPENIL V+ +                + + +++ DF
Sbjct: 131 QLCHALR--FLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 186
Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
             GS   F+   H+        T V +  +  PE++         G+ + CD+WS+G ++
Sbjct: 187 --GSAT-FDHEHHT--------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCIL 229
Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-EWSTISDEAK-- 397
           +    G+  F  +   +      +        + H  ++  Y +  G  W   S + +  
Sbjct: 230 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYV 289
Query: 398 ----------------------DLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVT 435
                                 DL+RR+L  D  +R++ A  L HP+ +      R   T
Sbjct: 290 KENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHT 349
Query: 436 PQ 437
            +
Sbjct: 350 SR 351

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
            QG  N I  L        HE H    HRD+K  NIL    D+    K+ DF L  +  K
Sbjct: 133 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 179
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
           F   V       +    VG+  +MAPE +   + P       + D++S GVV+  ++ G 
Sbjct: 180 FAQXV-------MXXRIVGTTAYMAPEALRGEITP-------KSDIYSFGVVLLEIITGL 225
Query: 221 P 221
           P
Sbjct: 226 P 226

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRD+K  NI      +   VK+ DF L + +K   S      +  +  P GS  +M
Sbjct: 151 KNIIHRDMKSNNIFL---HEGLTVKIGDFGLAT-VKSRWS-----GSQQVEQPTGSVLWM 201
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + +  + D++S G+V+Y L+ G  P+
Sbjct: 202 APEVIRM---QDNNPFSFQSDVYSYGIVLYELMTGELPY 237

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRD+K  NI      +   VK+ DF L + +K   S      +  +  P GS  +M
Sbjct: 151 KNIIHRDMKSNNIFL---HEGLTVKIGDFGLAT-VKSRWS-----GSQQVEQPTGSVLWM 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++      + + +  + D++S G+V+Y L+ G  P+
Sbjct: 202 APEVIRM---QDNNPFSFQSDVYSYGIVLYELMTGELPY 237

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 91/240 (37%), Gaps = 62/240 (25%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDF 280
           + CHA +    H  Q  + H DLKPENIL V+ +                + + +++ DF
Sbjct: 163 QLCHALR--FLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 218
Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
             GS   F+   H+        T V +  +  PE++         G+ + CD+WS+G ++
Sbjct: 219 --GSAT-FDHEHHT--------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCIL 261
Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-EWSTISDEAK-- 397
           +    G+  F  +   +      +        + H  ++  Y +  G  W   S + +  
Sbjct: 262 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYV 321
Query: 398 ----------------------DLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVT 435
                                 DL+RR+L  D  +R++ A  L HP+ +      R   T
Sbjct: 322 KENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHT 381

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 87/236 (36%), Gaps = 80/236 (33%)
Query: 44  CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFK--------- 94
            F+  YRL G +LGKG + +V     +   L+ A+K+I       R+RV           
Sbjct: 28  AFEAEYRL-GPLLGKGGFGTVFAGHRLTDRLQVAIKVI------PRNRVLGWSPLSDSVT 80
Query: 95  ---EVETFHHCQ---GHPNIIQLLEYYEDDE----------------------------- 119
              EV          GHP +I+LL+++E  E                             
Sbjct: 81  CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 120 ------------NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
                        H   + + HRD+K ENIL     +    KL DF  GSG   +   ++
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLIDF--GSGALLHDEPYT 196
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                      G+  +  PE ++         +     +WSLG+++Y ++CG  PF
Sbjct: 197 DFD--------GTRVYSPPEWIS-----RHQYHALPATVWSLGILLYDMVCGDIPF 239

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 46/190 (24%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
           G+   A Q    H   +G+ HRD+K ENIL     +    KL DF  GSG   +   ++ 
Sbjct: 146 GQVVAAIQ----HCHSRGVVHRDIKDENILIDL--RRGCAKLIDF--GSGALLHDEPYTD 197
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
                     G+  +  PE ++         +     +WSLG+++Y ++CG  PF  +  
Sbjct: 198 FD--------GTRVYSPPEWIS-----RHQYHALPATVWSLGILLYDMVCGDIPFERD-- 242
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
                         QEIL     +    FP    + +S +   LIRR L      R S  
Sbjct: 243 --------------QEIL-----EAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLE 279
Query: 416 SVLKHPWIST 425
            +L  PW+ T
Sbjct: 280 EILLDPWMQT 289

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 228 GEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
           G      R      C  +LF +  +  I H DLKPENIL  +P + + +K+ DF  GS  
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXA-IKIVDF--GSSC 209
Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
           +    ++  + +           + +PE++          YD   D+WSLG ++  +  G
Sbjct: 210 QLGQRIYQXIQSRF---------YRSPEVLLGM------PYDLAIDMWSLGCILVEMHTG 254
Query: 347 YPPFYG 352
            P F G
Sbjct: 255 EPLFSG 260

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           RI H DLKPENIL     + S +K+ DF  GS    +  V+  + +           + A
Sbjct: 220 RIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVYXXIQSRF---------YRA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
           PE++        + Y    D+WSLG ++  LL GYP      GED G Q
Sbjct: 268 PEVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 117 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 162
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 163 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 207
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 208 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 242
Query: 408 ARKRLSAASVLKHPWIS 424
              R +   +  HPW+ 
Sbjct: 243 PSDRPTFEEIQNHPWMQ 259

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 82/230 (35%), Gaps = 65/230 (28%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG--------IKFNTSVHSP------- 295
           Q GI HRD+KP N L  +  +L    L DF L  G        +KF  S           
Sbjct: 135 QFGIVHRDVKPSNFL--YNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 296 ----LATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
               L+    + P  G+  F APE++      +        D+WS GV+   LL G  PF
Sbjct: 193 CSICLSRRQQVAPRAGTPGFRAPEVLT-----KCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 351 YGNCGEDCGWQRGETCHACQEIL------------------------------------- 373
           Y    +     +  T    +E +                                     
Sbjct: 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPK 307
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             S  QGH    EG W+ + DEA DL+ +LL  +   R++A   L HP+ 
Sbjct: 308 LTSDIQGHATNLEG-WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 240 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 240 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 62/229 (27%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDF 280
           + CHA +    H  Q  + H DLKPENIL V+ +                + + +++ DF
Sbjct: 140 QLCHALR--FLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 195
Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
             GS   F+   H+        T V +  +  PE++         G+ + CD+WS+G ++
Sbjct: 196 --GSAT-FDHEHHT--------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCIL 238
Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-EWSTISDEAK-- 397
           +    G+  F  +   +      +        + H  ++  Y +  G  W   S + +  
Sbjct: 239 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYV 298
Query: 398 ----------------------DLIRRLLVKDARKRLSAASVLKHPWIS 424
                                 DL+RR+L  D  +R++ A  L HP+ +
Sbjct: 299 KENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 201
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 143 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 194 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 229

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
           + I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 143 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 194 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 229

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSXECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 240 IPFEHD----------------EEII-----GGQVFFRQ----RVSXECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
           WQ  E    CH C          G+ HRD+K ENIL      L+  +L   D GSG    
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
            +V++           G+  +  PE +  + + G  A+       +WSLG+++Y ++CG 
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
            PF  +                +EI+      G   F +     +S E + LIR  L   
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSXECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
              R +   +  HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
            HS++  I HRDLKP+NIL     + +         +++   D G   K ++        
Sbjct: 149 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 357
             L  P G++ + APE++        +   +  D++S+G V  YIL  G  PF      +
Sbjct: 207 --LNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 358 CGWQRGETCHACQEIL-FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
               RG    +  E+   H               ++  EA DLI +++  D  KR +A  
Sbjct: 262 SNIIRG--IFSLDEMKCLHD-------------RSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 417 VLKHP 421
           VL+HP
Sbjct: 307 VLRHP 311

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
            HS++  I HRDLKP+NIL     + +         +++   D G   K ++        
Sbjct: 149 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 357
             L  P G++ + APE++        +   +  D++S+G V  YIL  G  PF      +
Sbjct: 207 --LNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 358 CGWQRGETCHACQEIL-FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
               RG    +  E+   H               ++  EA DLI +++  D  KR +A  
Sbjct: 262 SNIIRG--IFSLDEMKCLHD-------------RSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 417 VLKHP 421
           VL+HP
Sbjct: 307 VLRHP 311

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 46/200 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HS Q  + HRDLKP N+L    ++   +K+ DF +  G+  + + H    T      V 
Sbjct: 174 MHSAQ--VIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEY----VA 224
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +  + APE++ +        Y +  DLWS+G +   +L     F G              
Sbjct: 225 TRWYRAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGK----------NYV 269
Query: 367 HACQEILF---------------HSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLL 404
           H  Q I+                  ++      P  +   W T+      +A  L+ R+L
Sbjct: 270 HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML 329
Query: 405 VKDARKRLSAASVLKHPWIS 424
             +   R+SAA+ L+HP+++
Sbjct: 330 RFEPSARISAAAALRHPFLA 349

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 46/200 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            HS Q  + HRDLKP N+L    ++   +K+ DF +  G+  + + H    T      V 
Sbjct: 175 MHSAQ--VIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEY----VA 225
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +  + APE++ +        Y +  DLWS+G +   +L     F G              
Sbjct: 226 TRWYRAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGK----------NYV 270
Query: 367 HACQEILF---------------HSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLL 404
           H  Q I+                  ++      P  +   W T+      +A  L+ R+L
Sbjct: 271 HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML 330
Query: 405 VKDARKRLSAASVLKHPWIS 424
             +   R+SAA+ L+HP+++
Sbjct: 331 RFEPSARISAAAALRHPFLA 350

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 38/190 (20%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
            HS++  I HRDLKP+NIL     + +         +++   D G   K ++        
Sbjct: 131 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR-CDLWSLG-VVVYILLCGYPPFYGNCGE 356
             L  P G++ + APE++      +      R  D++S+G V  YIL  G  PF      
Sbjct: 189 --LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD-----EAKDLIRRLLVKDARKR 411
           +    RG                    F   E   + D     EA DLI +++  D  KR
Sbjct: 247 ESNIIRGI-------------------FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 412 LSAASVLKHP 421
            +A  VL+HP
Sbjct: 288 PTAMKVLRHP 297

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 201
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 125 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 175
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 176 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 211

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 150 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 200
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 201 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 236

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 128 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 178
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 179 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 214

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 49/204 (24%)
Query: 253 GIAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           GI H D+KPEN+L      P+ L  +K+   DLG+   ++    + + T          E
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQT---------RE 200
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPPFYGNCGEDCGWQRGETC 366
           + +PE++     P   G     D+WS   +++ L+ G   + P  G+          +  
Sbjct: 201 YRSPEVL--LGAPWGCG----ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254
Query: 367 HACQEILFHSIQQGHY-----------------------DFPEGEWSTISDEAK---DLI 400
               E+  + ++ G Y                       D    ++    DEAK   D +
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFL 314
Query: 401 RRLLVKDARKRLSAASVLKHPWIS 424
             +L  D RKR  A  ++ HPW+ 
Sbjct: 315 SPMLQLDPRKRADAGGLVNHPWLK 338

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 128 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 178
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 179 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 214

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 84/231 (36%), Gaps = 65/231 (28%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH--------------SPL 296
           + GI HRDLKP N L    +Q   VK+CDF L   I  +  +H               P 
Sbjct: 149 ESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 297 ATPL---LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
              L   L + V +  + APE++          Y    D+WS G +   LL        N
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILL-----QENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 354 CGEDCGWQRGETC------HACQE-----------ILFHSIQQGHYD------------- 383
                    G +C      H  ++           I+F+ I     +             
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 384 ---FP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              FP         ++S+IS E  DL+  +L  +A+KR++    L HP++ 
Sbjct: 321 IKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 49/204 (24%)
Query: 253 GIAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           GI H D+KPEN+L      P+ L  +K+   DLG+   ++    + + T          E
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQT---------RE 200
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPPFYGNCGEDCGWQRGETC 366
           + +PE++     P   G     D+WS   +++ L+ G   + P  G+          +  
Sbjct: 201 YRSPEVL--LGAPWGCG----ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254
Query: 367 HACQEILFHSIQQGHY-----------------------DFPEGEWSTISDEAK---DLI 400
               E+  + ++ G Y                       D    ++    DEAK   D +
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFL 314
Query: 401 RRLLVKDARKRLSAASVLKHPWIS 424
             +L  D RKR  A  ++ HPW+ 
Sbjct: 315 SPMLQLDPRKRADAGGLVNHPWLK 338

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           K I HRDLK  NI  +H D    VK+ DF L +     +  H            GS  +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++      + + Y  + D+++ G+V+Y L+ G  P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLKPENIL         VKL DF L     +  ++      P+++T      + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----APVVVT----LWYRAP 180
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E++        S Y    D+WS+G +   +    P F GN   D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           I HRDLKPENIL         VKL DF L     +  ++      P+++T      + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----APVVVT----LWYRAP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           E++        S Y    D+WS+G +   +    P F GN   D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAE 182
           +R+ HRDLKP+N+L     +L   K+ DF L    GI      H           V +  
Sbjct: 119 RRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------VVTLW 165
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           + AP+++   MG  +  Y    D+WS+G +   ++ G P F G    D
Sbjct: 166 YRAPDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAE 182
           +R+ HRDLKP+N+L     +L   K+ DF L    GI      H           V +  
Sbjct: 119 RRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------VVTLW 165
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           + AP+++   MG  +  Y    D+WS+G +   ++ G P F G    D
Sbjct: 166 YRAPDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEAD 208

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	539
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-100
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-98
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-71
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-83
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-70
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	9e-81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-80
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-71
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-74
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-53
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-65
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-51
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-64
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-55
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-64
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-57
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-64
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-49
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	9e-64
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-54
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-63
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-55
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-63
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-53
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-63
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-55
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-62
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-51
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-62
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-51
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-62
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-51
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-62
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-55
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-62
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-51
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-62
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-49
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-61
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-50
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-61
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-50
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	8e-61
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-53
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-60
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-50
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-59
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-52
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-59
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-49
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-59
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-50
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-59
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-49
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-58
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-50
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-58
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-51
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-57
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-47
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-57
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-48
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-46
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-46
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-40
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-44
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-38
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-44
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-37
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-44
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-36
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-43
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-35
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-43
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-37
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-43
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-32
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-41
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-36
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-41
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-34
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-40
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-33
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-39
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-31
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-38
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-33
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-37
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-36
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-32
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-36
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-23
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-35
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-26
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-35
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-30
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-34
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-26
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-34
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-32
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-34
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-31
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-33
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-32
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-33
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-30
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-33
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-26
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-33
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-30
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-33
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-26
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-33
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-30
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-33
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-28
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-33
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-27
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-32
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-25
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-32
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-29
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-32
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-20
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-32
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-23
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-32
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-31
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	8e-32
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-31
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	8e-32
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-26
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-32
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-20
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-31
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	9e-28
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-31
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-20
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-31
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-20
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-31
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-30
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-31
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-28
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-31
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-27
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-31
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-27
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-30
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-20
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-30
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-19
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-29
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-19
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-29
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-19
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-29
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-18
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-29
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	4e-19
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-29
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-26
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-29
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-19
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-29
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-19
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-29
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-29
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-19
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-29
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-25
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	9e-29
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-19
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-28
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	7e-20
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-28
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-24
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-28
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-23
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-28
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-23
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-26
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-25
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-26
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-17
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-25
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-22
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-25
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-22
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-25
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-22
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-25
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-24
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-24
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-21
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-23
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-21
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-20
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-21
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-18
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-21
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-18
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-20
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-16
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-20
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-16
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-19
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-16
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-19
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-19
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-18
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-15
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-18
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-18
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-18
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-16
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-15
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-15
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-16
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-15
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-16
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-14
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-16
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-16
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-14
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-15
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-14
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-15
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-15
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	5e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-11
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-14
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-14
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-13
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-14
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-10
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	7e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-13
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	9e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-10
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	7e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-13
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-11
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-13
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-13
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-10
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-12
3ork_A	311	Serine/threonine protein kinase; structural genomi	5e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-11
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-13
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-12
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-09
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-12
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-12
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-07
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-12
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-10
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-12
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-11
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-11
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-11
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	6e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-10
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-10
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-10
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	7e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-10
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	5e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	6e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	8e-07
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-07
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	9e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	7e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	7e-07
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-04

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  303 bits (778), Expect = e-100
 Identities = 139/257 (54%), Positives = 176/257 (68%), Gaps = 42/257 (16%)

Query: 37  ATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEV 96
           +T   +  F+D+Y+L+ ++LG+GA+A VQTC+N++T  EYAVKII+K PGH RSRVF+EV
Sbjct: 2   STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61

Query: 97  ETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER---------- 123
           E  + CQGH N+++L+E++E+++                         E           
Sbjct: 62  EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA 121

Query: 124 ------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                 H + IAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLT
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN-GDCSPISTPELLT 180

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 236
           P GSAE+MAPE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RG
Sbjct: 181 PCGSAEYMAPEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239

Query: 237 ETCHACQEILFHSIQQG 253
           E C ACQ +LF SIQ+G
Sbjct: 240 EACPACQNMLFESIQEG 256

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  299 bits (768), Expect = 2e-98
 Identities = 127/194 (65%), Positives = 152/194 (78%), Gaps = 5/194 (2%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+  +GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N    SP++TP LLTP GS
Sbjct: 128 HN--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN-GDCSPISTPELLTPCGS 184

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
           AE+MAPE+V AF   EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C 
Sbjct: 185 AEYMAPEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
           ACQ +LF SIQ+G Y+FP+ +W+ IS  AKDLI +LLV+DA++RLSAA VL+HPW+    
Sbjct: 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG-C 302

Query: 428 TAHRPLVTPQVIRR 441
                L TP V++R
Sbjct: 303 APENTLPTPMVLQR 316

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  271 bits (695), Expect = 3e-86
 Identities = 81/262 (30%), Positives = 123/262 (46%), Gaps = 45/262 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    IAHRD+KPEN+L       + +KL DF                +   L TP  +
Sbjct: 178 HS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------SHNSLTTPCYT 226

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             ++APE++          YDK CD+WSLGV++YILLCGYPPFY N G            
Sbjct: 227 PYYVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--------- 271

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
                +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  + 
Sbjct: 272 --SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329

Query: 428 TA-HRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMR 485
                PL T +V++ ++   E +     SA++  RV  +   I                +
Sbjct: 330 KVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKI---------------KK 374

Query: 486 LSPPSESLLVQRRQRLQSQSQS 507
           +   S  LL++RR++ ++   +
Sbjct: 375 IEDASNPLLLKRRKKARALEAA 396

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  231 bits (592), Expect = 4e-71
 Identities = 63/290 (21%), Positives = 106/290 (36%), Gaps = 77/290 (26%)

Query: 10  HSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVN 69
            +  +    +        +  +   K+   +  +   D Y++  ++LG G    V    N
Sbjct: 24  PTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFN 83

Query: 70  ILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH----- 124
             T+ ++A+K++         +  +EVE        P+I+++++ YE+     +      
Sbjct: 84  KRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138

Query: 125 -----------------------------------------KRIAHRDLKPENILCVHPD 143
                                                      IAHRD+KPEN+L     
Sbjct: 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198

Query: 144 QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR 203
             + +KL DF                +   L TP  +  ++APE++          YDK 
Sbjct: 199 PNAILKLTDFGFAKETT---------SHNSLTTPCYTPYYVAPEVL------GPEKYDKS 243

Query: 204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG 253
           CD+WSLGV++YILLCGYPPFY N G                 +   I+ G
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYSNHGLA-----------ISPGMKTRIRMG 282

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  260 bits (667), Expect = 5e-83
 Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 31/216 (14%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    IAHRD+KPEN+L    ++ + +KL DF                    L TP  +
Sbjct: 145 HS--HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT----------QNALQTPCYT 192

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             ++APE++          YDK CD+WSLGV++YILLCG+PPFY N G+           
Sbjct: 193 PYYVAPEVL------GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI--------- 237

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
                +   I+ G Y FP  EWS +S++AK LIR LL  D  +RL+    + HPWI+ + 
Sbjct: 238 --SPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295

Query: 428 TA-HRPLVTPQVIRRNQSA-RELSSFAESAMSANRV 461
                PL T +V++ ++    E+     SA++  RV
Sbjct: 296 VVPQTPLHTARVLQEDKDHWDEVKEEMTSALATMRV 331

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  228 bits (583), Expect = 2e-70
 Identities = 67/279 (24%), Positives = 104/279 (37%), Gaps = 84/279 (30%)

Query: 27  ARNKRRRKKTATSLV------TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKI 80
           A +          L            D Y+L  ++LG G    V  C +  T  + A+K+
Sbjct: 2   AHHHHHHSSGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL 61

Query: 81  IDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER----------------- 123
           +         +  +EV+      G P+I+ +L+ YE+  + +R                 
Sbjct: 62  LYD-----SPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSR 116

Query: 124 ----------------------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFD 154
                                       H   IAHRD+KPEN+L    ++ + +KL DF 
Sbjct: 117 IQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176

Query: 155 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 214
                              L TP  +  ++APE++          YDK CD+WSLGV++Y
Sbjct: 177 FAKETT----------QNALQTPCYTPYYVAPEVL------GPEKYDKSCDMWSLGVIMY 220

Query: 215 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG 253
           ILLCG+PPFY N G+                +   I+ G
Sbjct: 221 ILLCGFPPFYSNTGQA-----------ISPGMKRRIRLG 248

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  255 bits (652), Expect = 9e-81
 Identities = 82/395 (20%), Positives = 130/395 (32%), Gaps = 98/395 (24%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-----LPGHSRSRVFKEVETF 99
            Q  Y L    +G+G+Y  V+  +   T    A+KI++K     +      R+  EV   
Sbjct: 24  LQKKYHL-KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82

Query: 100 HHCQGHPNIIQLLEYYEDDENH----------ERHKRIAHRDLKPENILCVHPDQLSPVK 149
                HPNI +L E YED++                ++               D +    
Sbjct: 83  KKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG--KCAMDVVKTQI 139

Query: 150 LCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 209
               +        +      +   +      +  M  +I +A                  
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR-QIFSA------------------ 180

Query: 210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP 269
             + Y                         H           QGI HRD+KPEN L    
Sbjct: 181 --LHY------------------------LH----------NQGICHRDIKPENFLFSTN 204

Query: 270 DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK 329
                +KL DF  G   +F     +      + T  G+  F+APE++N         Y  
Sbjct: 205 KS-FEIKLVDF--GLSKEFYKL--NNGEYYGMTTKAGTPYFVAPEVLNTTNES----YGP 255

Query: 330 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEW 389
           +CD WS GV++++LL G  PF G                        +      F    +
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVN---------------DADTISQVLNKKLCFENPNY 300

Query: 390 STISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           + +S  A+DL+  LL ++  +R  A   L+HPWIS
Sbjct: 301 NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  253 bits (648), Expect = 3e-80
 Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 26/222 (11%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H    G+ HRDLKPEN+L    +    +K+ DF          +   P     L TP  +
Sbjct: 123 HD--VGVVHRDLKPENLLFTDENDNLEIKIIDFGF--------ARLKPPDNQPLKTPCFT 172

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             + APE++        +GYD+ CDLWSLGV++Y +L G  PF  +          E   
Sbjct: 173 LHYAAPELL------NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE--- 223

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
                +   I++G + F    W  +S EAKDLI+ LL  D  KRL  + +  + W+    
Sbjct: 224 -----IMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS 278

Query: 428 TA-HRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSI 468
                PL+TP ++  + +A   +    +  + N+   + F +
Sbjct: 279 QLSSNPLMTPDILGSSGAAV-HTCVKATFHAFNKYKREGFCL 319

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  230 bits (589), Expect = 1e-71
 Identities = 67/254 (26%), Positives = 102/254 (40%), Gaps = 67/254 (26%)

Query: 42  TSCFQDLYRL--KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETF 99
            S F   Y L  K + LG+G+++  + CV+  +   +AVKII K      +   KE+   
Sbjct: 3   DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITAL 59

Query: 100 HHCQGHPNIIQLLEYYEDDENH-----------------------ER------------- 123
             C+GHPNI++L E + D  +                        E              
Sbjct: 60  KLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAV 119

Query: 124 ---HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
              H   + HRDLKPEN+L    +    +K+ DF          +   P     L TP  
Sbjct: 120 SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGF--------ARLKPPDNQPLKTPCF 171

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
           +  + APE++        +GYD+ CDLWSLGV++Y +L G  PF  +          E  
Sbjct: 172 TLHYAAPELL------NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-- 223

Query: 240 HACQEILFHSIQQG 253
                 +   I++G
Sbjct: 224 ------IMKKIKKG 231

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  237 bits (608), Expect = 4e-74
 Identities = 76/259 (29%), Positives = 111/259 (42%), Gaps = 53/259 (20%)

Query: 248 HSIQQGIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           H+  QG+ HRDLKP NIL V        +++CDF     ++    +        L+TP  
Sbjct: 133 HA--QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL--------LMTPCY 182

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           +A F+APE++      E  GYD  CD+WSLGV++Y +L GY PF     +          
Sbjct: 183 TANFVAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--------- 227

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
               E +   I  G +    G W+++SD AKDL+ ++L  D  +RL+AA VL+HPWI   
Sbjct: 228 ---PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284

Query: 427 GTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRL 486
                       + R  +   +     +  SA           +N              L
Sbjct: 285 DQL-----PQYQLNRQDAPHLVKGAMAATYSALN---------RNQS----------PVL 320

Query: 487 SPPSESLLVQRRQRLQSQS 505
            P   S L QRR   +  S
Sbjct: 321 EPVGRSTLAQRRGIKKITS 339

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  213 bits (545), Expect = 8e-65
 Identities = 72/253 (28%), Positives = 107/253 (42%), Gaps = 72/253 (28%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH 101
           +  F D Y +  E +G G+Y+  + C++  T +E+AVKIIDK    S+    +E+E    
Sbjct: 17  SIQFTDGYEV-KEDIGVGSYSVCKRCIHKATNMEFAVKIIDK----SKRDPTEEIEILLR 71

Query: 102 CQGHPNIIQLLEYYEDDENH-----------------------ER--------------- 123
              HPNII L + Y+D +                         ER               
Sbjct: 72  YGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131

Query: 124 -HKR-IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            H + + HRDLKP NIL V        +++CDF     ++    +        L+TP  +
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL--------LMTPCYT 183

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 240
           A F+APE++      E  GYD  CD+WSLGV++Y +L GY PF     +           
Sbjct: 184 ANFVAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---------- 227

Query: 241 ACQEILFHSIQQG 253
              E +   I  G
Sbjct: 228 --PEEILARIGSG 238

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  215 bits (549), Expect = 3e-65
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 37/217 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H     I HRD+KP  +L    +  +PVKL  F +        ++    +  +    VG+
Sbjct: 147 HD--NNIIHRDVKPHCVLLASKENSAPVKLGGFGV--------AIQLGESGLVAGGRVGT 196

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             FMAPE+V          Y K  D+W  GV+++ILL G  PFYG               
Sbjct: 197 PHFMAPEVVKR------EPYGKPVDVWGCGVILFILLSGCLPFYGT-------------- 236

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
             +E LF  I +G Y     +WS IS+ AKDL+RR+L+ D  +R++    L HPW+    
Sbjct: 237 --KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD 294

Query: 428 TA----HRPLVTPQVIRRNQSARELSSFAESAMSANR 460
                 H P    Q +R+  + R+L     +A+S+++
Sbjct: 295 RYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 330

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  184 bits (468), Expect = 1e-53
 Identities = 66/233 (28%), Positives = 97/233 (41%), Gaps = 65/233 (27%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-----LPGHSRSRVFKEV 96
              F+D+Y L  E++GKG ++ V+ C+N  T  ++AVKI+D       PG S   + +E 
Sbjct: 19  DVLFEDVYEL-CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77

Query: 97  ETFHHCQGHPNIIQLLEYYEDDENH---------------------------ER------ 123
              H    HP+I++LLE Y  D                              E       
Sbjct: 78  SICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM 136

Query: 124 ----------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
                     H   I HRD+KP  +L    +  +PVKL  F +        ++    +  
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV--------AIQLGESGL 188

Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +    VG+  FMAPE+V          Y K  D+W  GV+++ILL G  PFYG
Sbjct: 189 VAGGRVGTPHFMAPEVVKR------EPYGKPVDVWGCGVILFILLSGCLPFYG 235

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  212 bits (543), Expect = 4e-65
 Identities = 69/215 (32%), Positives = 95/215 (44%), Gaps = 51/215 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    IAHRD+KPEN+L       + +KL DF                           
Sbjct: 134 HS--INIAHRDVKPENLLYTSKRPNAILKLTDFGF------------------------- 166

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
               A E            YDK CD+WSLGV++YILLCGYPPFY                
Sbjct: 167 ----AKETT-------GEKYDKSCDMWSLGVIMYILLCGYPPFYS-----------NHGL 204

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
           A    +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  + 
Sbjct: 205 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264

Query: 428 TA-HRPLVTPQVIRRNQSARE-LSSFAESAMSANR 460
                PL T +V++ ++   E +     SA++  R
Sbjct: 265 KVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMR 299

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  176 bits (449), Expect = 2e-51
 Identities = 57/258 (22%), Positives = 87/258 (33%), Gaps = 98/258 (37%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH 101
            +   D Y++  ++LG G    V    N  T+ ++A+K++         +  +EVE    
Sbjct: 12  KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWR 66

Query: 102 CQGHPNIIQLLEYYEDDENHERH------------------------------------- 124
               P+I+++++ YE+     +                                      
Sbjct: 67  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126

Query: 125 ---------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                      IAHRD+KPEN+L       + +KL DF                      
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------------- 166

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
                    A E            YDK CD+WSLGV++YILLCGYPPFY           
Sbjct: 167 ---------AKETT-------GEKYDKSCDMWSLGVIMYILLCGYPPFY----------- 199

Query: 236 GETCHACQEILFHSIQQG 253
                A    +   I+ G
Sbjct: 200 SNHGLAISPGMKTRIRMG 217

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  188 bits (480), Expect = 1e-55
 Identities = 70/255 (27%), Positives = 106/255 (41%), Gaps = 73/255 (28%)

Query: 39  SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVET 98
           S+ T+  +  +    E+LG GA++ V      LT   +A+K I K P    S +  E+  
Sbjct: 1   SMQTTNIRKTFIF-MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAV 59

Query: 99  FHHCQGHPNIIQLLEYYEDDENH-----------------------ER------------ 123
               + H NI+ L + YE   ++                       E+            
Sbjct: 60  LKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA 118

Query: 124 ----HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
               H+  I HRDLKPEN+L + P++ S + + DF L        S        ++ T  
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL--------SKM--EQNGIMSTAC 168

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
           G+  ++APE++          Y K  D WS+GV+ YILLCGYPPFY            ET
Sbjct: 169 GTPGYVAPEVLAQ------KPYSKAVDCWSIGVITYILLCGYPPFY-----------EET 211

Query: 239 CHACQEILFHSIQQG 253
               +  LF  I++G
Sbjct: 212 ----ESKLFEKIKEG 222

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  211 bits (539), Expect = 3e-64
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 33/199 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q  I H DLKP+NIL      L  +K+ DF +   I     +            +G+ E+
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---------EIMGTPEY 199

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APEI+N              D+W++G++ Y+LL    PF G           E      
Sbjct: 200 LAPEILNY------DPITTATDMWNIGIIAYMLLTHTSPFVG-----------ED----N 238

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
           +  + +I Q + D+ E  +S++S  A D I+ LLVK+  KR +A   L H W+      +
Sbjct: 239 QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN 298

Query: 431 --RPLVTPQVIR-RNQSAR 446
              P  T    + ++ S R
Sbjct: 299 LFHPEETSSSSQTQDHSVR 317

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  193 bits (492), Expect = 3e-57
 Identities = 55/226 (24%), Positives = 86/226 (38%), Gaps = 59/226 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
           F + Y L  + LG+G +A V+ C++  T  EYA K + K       R+ +  E+      
Sbjct: 26  FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA 85

Query: 103 QGHPNIIQLLEYYEDDENH-------------------------ER-------------- 123
           +  P +I L E YE+                             E               
Sbjct: 86  KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145

Query: 124 --HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
             H+  I H DLKP+NIL      L  +K+ DF +   I     +            +G+
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---------EIMGT 196

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            E++APEI+N              D+W++G++ Y+LL    PF G 
Sbjct: 197 PEYLAPEILNY------DPITTATDMWNIGIIAYMLLTHTSPFVGE 236

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  211 bits (540), Expect = 6e-64
 Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 34/215 (15%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H    GI HRDLKPEN+L   P   +P+K+ DF L   ++            L+ T  G+
Sbjct: 165 HE--NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------LMKTVCGT 213

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             + APEI+          Y    D+WS+G++ YILLCG+ PFY                
Sbjct: 214 PGYCAPEILRG------CAYGPEVDMWSVGIITYILLCGFEPFYD--------------E 253

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS--T 425
              + +F  I    Y F    W  +S  AKDL+R+L+V D +KRL+    L+HPW++   
Sbjct: 254 RGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313

Query: 426 AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
           A   H      + ++   + R+L +  ++ ++++R
Sbjct: 314 ANFVHMDTA-QKKLQEFNARRKLKAAVKAVVASSR 347

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  173 bits (441), Expect = 1e-49
 Identities = 70/266 (26%), Positives = 99/266 (37%), Gaps = 68/266 (25%)

Query: 9   HHSVPVATSKSNAERIEEARNKRRRKKTATSLV---------TSCFQDLYRLKGEILGKG 59
           HHS  V     N      +           SLV              D + +    LG+G
Sbjct: 6   HHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEV-ESELGRG 64

Query: 60  AYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE 119
           A + V  C    T+  YA+K++ K     +  V  E+        HPNII+L E +E   
Sbjct: 65  ATSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLS-HPNIIKLKEIFETPT 121

Query: 120 NH-----------------------ER----------------HKR-IAHRDLKPENILC 139
                                    ER                H+  I HRDLKPEN+L 
Sbjct: 122 EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLY 181

Query: 140 VHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG 199
             P   +P+K+ DF L   ++            L+ T  G+  + APEI+          
Sbjct: 182 ATPAPDAPLKIADFGLSKIVEHQV---------LMKTVCGTPGYCAPEILRG------CA 226

Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYG 225
           Y    D+WS+G++ YILLCG+ PFY 
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYD 252

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  214 bits (546), Expect = 9e-64
 Identities = 74/225 (32%), Positives = 107/225 (47%), Gaps = 42/225 (18%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          Q G+ HR+LKPEN+L     + + VKL DF L        ++      
Sbjct: 126 CH----------QMGVVHRNLKPENLLLASKLKGAAVKLADFGL--------AIEVEGEQ 167

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                  G+  +++PE++          Y K  DLW+ GV++YILL GYPPF+       
Sbjct: 168 QAWFGFAGTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFWD------ 215

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                E     Q  L+  I+ G YDFP  EW T++ EAKDLI ++L  +  KR++AA  L
Sbjct: 216 -----ED----QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL 266

Query: 419 KHPWISTAGTAHRPL---VTPQVIRRNQSARELSSFAESAMSANR 460
           KHPWIS   T    +    T   +++  + R+L     + M A R
Sbjct: 267 KHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATR 311

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  187 bits (477), Expect = 8e-54
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 58/230 (25%)

Query: 38  TSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKE 95
            ++  + F + Y+L  E LGKGA++ V+ CV +L   EYA  II+   L      ++ +E
Sbjct: 2   ATITCTRFTEEYQL-FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE 60

Query: 96  VETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER--------- 123
                  + HPNI++L +   ++ +H                       E          
Sbjct: 61  ARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 119

Query: 124 -------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                  H+  + HR+LKPEN+L     + + VKL DF L        ++          
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGL--------AIEVEGEQQAWF 171

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
              G+  +++PE++          Y K  DLW+ GV++YILL GYPPF+ 
Sbjct: 172 GFAGTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFWD 215

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  207 bits (530), Expect = 3e-63
 Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 29/182 (15%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H     I HRDLKPENIL    D    +KL DF     +              L    G+
Sbjct: 141 HK--LNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLD---------PGEKLREVCGT 186

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             ++APEI+   M     GY K  D+WS GV++Y LL G PPF+                
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH-----------RK-- 233

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
             Q ++   I  G+Y F   EW   SD  KDL+ R LV   +KR +A   L HP+     
Sbjct: 234 --QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291

Query: 428 TA 429
             
Sbjct: 292 VE 293

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  187 bits (478), Expect = 2e-55
 Identities = 79/261 (30%), Positives = 101/261 (38%), Gaps = 77/261 (29%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---------RSRV 92
           T  F + Y    EILG+G  + V+ C++  T  EYAVKIID   G S         R   
Sbjct: 12  THGFYENYEP-KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70

Query: 93  FKEVETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER------ 123
            KEV+      GHPNIIQL + YE +                          E+      
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130

Query: 124 ----------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
                     HK  I HRDLKPENIL    D    +KL DF     +             
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLD---------PGE 178

Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 232
            L    G+  ++APEI+   M     GY K  D+WS GV++Y LL G PPF+        
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW-------- 230

Query: 233 WQRGETCHACQEILFHSIQQG 253
                     Q ++   I  G
Sbjct: 231 ---HRK----QMLMLRMIMSG 244

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  209 bits (535), Expect = 4e-63
 Identities = 74/266 (27%), Positives = 110/266 (41%), Gaps = 50/266 (18%)

Query: 237 ETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
           +  H  Q+IL      HS   GI HR+LKPEN+L     + + VKL DF  G  I+ N S
Sbjct: 129 DASHCIQQILESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADF--GLAIEVNDS 184

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                         G+  +++PE++          Y K  D+W+ GV++YILL GYPPF+
Sbjct: 185 E-------AWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFW 231

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                       E     Q  L+  I+ G YD+P  EW T++ EAK LI  +L  + +KR
Sbjct: 232 D-----------ED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 276

Query: 412 LSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMS-----ANRVILQHF 466
           ++A   LK PWI               I R  +   L  F  +A           ++   
Sbjct: 277 ITADQALKVPWICNRERV------ASAIHRQDTVDCLKKF--NARRKLKGAILTTMIATR 328

Query: 467 SICKNPKDEQWLATPTNMRLSPPSES 492
           ++    ++               S  
Sbjct: 329 NLSNLGRNLLNKKEQGPPSTIKESSE 354

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  184 bits (469), Expect = 2e-53
 Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 74/254 (29%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETF 99
           ++ F D Y +  E LGKGA++ V+ CV+  T LE+A KII+   L      ++ +E    
Sbjct: 24  STKFSDNYDV-KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82

Query: 100 HHCQGHPNIIQLLEYYEDDENH-----------------------ER------------- 123
              Q HPNI++L +  +++  H                       E              
Sbjct: 83  RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 141

Query: 124 ---HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
              H   I HR+LKPEN+L     + + VKL DF  G  I+ N S              G
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF--GLAIEVNDSE-------AWHGFAG 192

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
           +  +++PE++          Y K  D+W+ GV++YILL GYPPF+            E  
Sbjct: 193 TPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFW-----------DED- 234

Query: 240 HACQEILFHSIQQG 253
              Q  L+  I+ G
Sbjct: 235 ---QHRLYAQIKAG 245

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  207 bits (528), Expect = 4e-63
 Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 32/186 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HR+LKPEN+L     + + VKL DF L   +  + +              G+
Sbjct: 122 HS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---------WHGFAGT 170

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +++PE++          Y K  D+W+ GV++YILL GYPPF+            E   
Sbjct: 171 PGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWD-----------ED-- 211

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
             Q  L+  I+ G YD+P  EW T++ EAK LI  +L  + +KR++A   LK PWI    
Sbjct: 212 --QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 269

Query: 428 TAHRPL 433
                +
Sbjct: 270 RVASAI 275

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  186 bits (475), Expect = 2e-55
 Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 59/226 (26%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETF 99
           ++ F D Y +  E LGKGA++ V+ CV+  T LE+A KII+   L      ++ +E    
Sbjct: 1   STKFSDNYDV-KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59

Query: 100 HHCQGHPNIIQLLEYYEDDENH-----------------------ER------------- 123
              Q HPNI++L +  +++  H                       E              
Sbjct: 60  RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118

Query: 124 ---HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
              H   I HR+LKPEN+L     + + VKL DF L   +  + +              G
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---------WHGFAG 169

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +  +++PE++          Y K  D+W+ GV++YILL GYPPF+ 
Sbjct: 170 TPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWD 209

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  206 bits (526), Expect = 1e-62
 Identities = 65/187 (34%), Positives = 91/187 (48%), Gaps = 32/187 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
            + IAH DLKPENI+ +  +  +P +KL DF +   I+                  G+ E
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---------NIFGTPE 176

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APEIVN              D+WS+GV+ YILL G  PF G           ET    
Sbjct: 177 FVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG-----------ET---- 215

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
           ++    +I   +YDF E  +S  S+ AKD IRRLLVKD ++R++ A  L+H WI      
Sbjct: 216 KQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275

Query: 430 H-RPLVT 435
           + R   +
Sbjct: 276 NVRGEDS 282

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  176 bits (450), Expect = 1e-51
 Identities = 70/230 (30%), Positives = 94/230 (40%), Gaps = 64/230 (27%)

Query: 43  SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRSRVFKEV 96
           S  +D Y + GE LG G +A V+ C    T  EYA K I K        G SR  + +EV
Sbjct: 1   SMVEDHYEM-GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 59

Query: 97  ETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER---------- 123
                 + HPNII L + +E+  +                        E           
Sbjct: 60  NILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118

Query: 124 ------HKR-IAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                 H + IAH DLKPENI+ +  +  +P +KL DF +   I+               
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK--------- 169

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
              G+ EF+APEIVN              D+WS+GV+ YILL G  PF G
Sbjct: 170 NIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG 213

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  205 bits (523), Expect = 2e-62
 Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 42/197 (21%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +  +AHRDLKPEN L +     SP+KL DF L +  K           
Sbjct: 122 CH----------KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-------- 163

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
            ++ T VG+  +++P+++          Y   CD WS GV++Y+LLCGYPPF        
Sbjct: 164 -MMRTKVGTPYYVSPQVLEG-------LYGPECDEWSAGVMMYVLLCGYPPFSA------ 209

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                 T       +   I++G + FPE +W  +S +A+ LIRRLL K  ++R+++   L
Sbjct: 210 -----PT----DSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 260

Query: 419 KHPWISTAGTA-HRPLV 434
           +H W     ++  R L+
Sbjct: 261 EHEWFEKQLSSSPRNLL 277

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  176 bits (449), Expect = 2e-51
 Identities = 64/221 (28%), Positives = 92/221 (41%), Gaps = 58/221 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
               Y L    +G+G++  V+  V   T +  A K I K       R  +E+E       
Sbjct: 7   INQYYTL-ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD- 64

Query: 105 HPNIIQLLEYYEDDENH-----------------------ER----------------HK 125
           HPNII+L E +ED+ +                        E                 HK
Sbjct: 65  HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124

Query: 126 R-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             +AHRDLKPEN L +     SP+KL DF L +  K            ++ T VG+  ++
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---------MMRTKVGTPYYV 175

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +P+++          Y   CD WS GV++Y+LLCGYPPF  
Sbjct: 176 SPQVLEG-------LYGPECDEWSAGVMMYVLLCGYPPFSA 209

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  208 bits (530), Expect = 4e-62
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 32/226 (14%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I H D+KPENI+C      S VK+ DF L + +  +  V              +AEF
Sbjct: 167 EHSIVHLDIKPENIMCETKKA-SSVKIIDFGLATKLNPDEIVK---------VTTATAEF 216

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APEIV+              D+W++GV+ Y+LL G  PF G           E      
Sbjct: 217 AAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAG-----------ED----D 255

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA- 429
                ++++  ++F E  +S++S EAKD I+ LL K+ RKRL+    L+HPW+    +  
Sbjct: 256 LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNL 315

Query: 430 HRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDE 475
              + + +  +  Q  +E  +   +   A   I    S+ K+   E
Sbjct: 316 TSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQE 361

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  179 bits (455), Expect = 3e-51
 Identities = 62/262 (23%), Positives = 90/262 (34%), Gaps = 63/262 (24%)

Query: 9   HHSVPVATSKSNAERIEEARNKRRRKKT----ATSLVTSCFQDLYRLKGEILGKGAYASV 64
           HH   V       +  +  +      K        +      D Y +  E LG GA+  V
Sbjct: 9   HHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDI-LEELGSGAFGVV 67

Query: 65  QTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH--- 121
             CV   T   +  K I+      +  V  E+   +    HP +I L + +ED       
Sbjct: 68  HRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLI 126

Query: 122 ---------------------ER----------------HKR-IAHRDLKPENILCVHPD 143
                                E                 H+  I H D+KPENI+C    
Sbjct: 127 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK 186

Query: 144 QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR 203
             S VK+ DF L + +  +  V              +AEF APEIV+             
Sbjct: 187 A-SSVKIIDFGLATKLNPDEIVK---------VTTATAEFAAPEIVDR------EPVGFY 230

Query: 204 CDLWSLGVVVYILLCGYPPFYG 225
            D+W++GV+ Y+LL G  PF G
Sbjct: 231 TDMWAIGVLGYVLLSGLSPFAG 252

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  206 bits (526), Expect = 7e-62
 Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 29/176 (16%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+    I HRDLKPENIL    D    ++L DF     ++             L    G+
Sbjct: 217 HA--NNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLE---------PGEKLRELCGT 262

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             ++APEI+   M     GY K  DLW+ GV+++ LL G PPF+                
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH-----------RR-- 309

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             Q ++   I +G Y F   EW   S   KDLI RLL  D   RL+A   L+HP+ 
Sbjct: 310 --QILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  188 bits (479), Expect = 6e-55
 Identities = 64/297 (21%), Positives = 103/297 (34%), Gaps = 76/297 (25%)

Query: 5   GDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASV 64
            +    +  +  ++         ++     +         F   Y    +++G+G  + V
Sbjct: 52  ANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDP-KDVIGRGVSSVV 110

Query: 65  QTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
           + CV+  T  E+AVKI++              R    +E        GHP+II L++ YE
Sbjct: 111 RRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170

Query: 117 DDENH-----------------------ER----------------HKR-IAHRDLKPEN 136
                                       E+                H   I HRDLKPEN
Sbjct: 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPEN 230

Query: 137 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 196
           IL    D    ++L DF     ++             L    G+  ++APEI+   M   
Sbjct: 231 ILL---DDNMQIRLSDFGFSCHLE---------PGEKLRELCGTPGYLAPEILKCSMDET 278

Query: 197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG 253
             GY K  DLW+ GV+++ LL G PPF+                  Q ++   I +G
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFW-----------HRR----QILMLRMIMEG 320

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  205 bits (523), Expect = 8e-62
 Identities = 63/194 (32%), Positives = 88/194 (45%), Gaps = 31/194 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
              IAH DLKPENI+ +  +   P +K+ DF L   I F                 G+ E
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---------NIFGTPE 182

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APEIVN              D+WS+GV+ YILL G  PF G           +T    
Sbjct: 183 FVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG-----------DT---- 221

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
           ++    ++   +Y+F +  +S  S  AKD IRRLLVKD +KR++    L+HPWI    T 
Sbjct: 222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281

Query: 430 HRPLVTPQVIRRNQ 443
                    +   +
Sbjct: 282 QALSRKASAVNMEK 295

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  177 bits (451), Expect = 3e-51
 Identities = 73/236 (30%), Positives = 91/236 (38%), Gaps = 64/236 (27%)

Query: 37  ATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRS 90
            T        D Y   GE LG G +A V+ C    T L+YA K I K        G SR 
Sbjct: 1   GTVFRQENVDDYYDT-GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59

Query: 91  RVFKEVETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER---- 123
            + +EV      Q HPN+I L E YE+  +                        E     
Sbjct: 60  DIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118

Query: 124 ------------HKR-IAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPL 169
                       H   IAH DLKPENI+ +  +   P +K+ DF L   I F        
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175

Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
                    G+ EF+APEIVN              D+WS+GV+ YILL G  PF G
Sbjct: 176 ------NIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG 219

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  206 bits (526), Expect = 8e-62
 Identities = 76/263 (28%), Positives = 111/263 (42%), Gaps = 43/263 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
            + IAH DLKPENI+ +  +   P +KL DF L   I+                  G+ E
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---------NIFGTPE 183

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APEIVN              D+WS+GV+ YILL G  PF G           +T    
Sbjct: 184 FVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG-----------DT---- 222

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
           ++    +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+   T 
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQ 282

Query: 430 HRPLVTPQV-----IRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNM 484
              +    V      ++    R            N        + ++   +  L T  ++
Sbjct: 283 QAMVRRESVVNLENFKKQYVRRRWKLSFSIVSLCNH-------LTRSLMKKVHLRTSEDL 335

Query: 485 RLSPPSESLLVQRRQRLQSQSQS 507
           R         + RR+ L  + +S
Sbjct: 336 RNCESDTEENIARRKALHPRRRS 358

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  173 bits (440), Expect = 2e-49
 Identities = 71/228 (31%), Positives = 91/228 (39%), Gaps = 64/228 (28%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRSRVFKEVET 98
            +D Y + GE LG G +A V+ C    T LEYA K I K        G  R  + +EV  
Sbjct: 10  VEDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68

Query: 99  FHHCQGHPNIIQLLEYYEDDENH-----------------------ER------------ 123
                 HPNII L + YE+  +                        E             
Sbjct: 69  LRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127

Query: 124 ----HKR-IAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
               H + IAH DLKPENI+ +  +   P +KL DF L   I+                 
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---------NI 178

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            G+ EF+APEIVN              D+WS+GV+ YILL G  PF G
Sbjct: 179 FGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG 220

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  204 bits (522), Expect = 1e-61
 Identities = 66/194 (34%), Positives = 90/194 (46%), Gaps = 31/194 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
            + IAH DLKPENI+ +  +   P +KL DF L   I+                  G+ E
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---------NIFGTPE 183

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           F+APEIVN              D+WS+GV+ YILL G  PF G           +T    
Sbjct: 184 FVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG-----------DT---- 222

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
           ++    +I    YDF E  +S  S+ AKD IR+LLVK+ RKRL+    L+HPWI+     
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQ 282

Query: 430 HRPLVTPQVIRRNQ 443
              +    V+    
Sbjct: 283 QAMVRRESVVNLEN 296

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  175 bits (445), Expect = 2e-50
 Identities = 70/231 (30%), Positives = 91/231 (39%), Gaps = 64/231 (27%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRSRVFKE 95
               +D Y + GE LG G +A V+ C    T LEYA K I K        G SR  + +E
Sbjct: 7   QQKVEDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65

Query: 96  VETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER--------- 123
           V        H N+I L + YE+  +                        E          
Sbjct: 66  VSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124

Query: 124 -------HKR-IAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLL 174
                  H + IAH DLKPENI+ +  +   P +KL DF L   I+              
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK-------- 176

Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
               G+ EF+APEIVN              D+WS+GV+ YILL G  PF G
Sbjct: 177 -NIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLG 220

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  204 bits (520), Expect = 2e-61
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 35/208 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              I H D++PENI+       S +K+ +F     +K   +               + E+
Sbjct: 120 SHNIGHFDIRPENIIYQTRRS-STIKIIEFGQARQLKPGDNFR---------LLFTAPEY 169

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+                D+WSLG +VY+LL G  PF             ET     
Sbjct: 170 YAPEVHQH------DVVSTATDMWSLGTLVYVLLSGINPFLA-----------ET----N 208

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
           + +  +I    Y F E  +  IS EA D + RLLVK+ + R++A+  L+HPW+       
Sbjct: 209 QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER- 267

Query: 431 RPLVTPQVIRRNQSARELSSFAESAMSA 458
              V+ +VIR  +  R   +  +  ++ 
Sbjct: 268 ---VSTKVIRTLKHRRYYHTLIKKDLNM 292

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  173 bits (441), Expect = 6e-50
 Identities = 51/222 (22%), Positives = 77/222 (34%), Gaps = 60/222 (27%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
             + Y +  E LG+G +  V  CV   ++  Y  K +    G  +  V KE+   +    
Sbjct: 3   LYEKYMI-AEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIA-R 59

Query: 105 HPNIIQLLEYYEDDENH------------------------ER----------------H 124
           H NI+ L E +E  E                          ER                H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 125 KR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
              I H D++PENI+       S +K+ +F     +K   +               + E+
Sbjct: 120 SHNIGHFDIRPENIIYQTRRS-STIKIIEFGQARQLKPGDNFR---------LLFTAPEY 169

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            APE+                D+WSLG +VY+LL G  PF  
Sbjct: 170 YAPEVHQH------DVVSTATDMWSLGTLVYVLLSGINPFLA 205

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  201 bits (513), Expect = 8e-61
 Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 41/186 (22%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          +  I HRDLKPENIL    ++   +K+ DF  G    F  +       
Sbjct: 137 MH----------KHNIVHRDLKPENILLESKEKDCDIKIIDF--GLSTCFQQNT------ 178

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
             +   +G+A ++APE++          YD++CD+WS GV++YILL G PPFYG      
Sbjct: 179 -KMKDRIGTAYYIAPEVLR-------GTYDEKCDVWSAGVILYILLSGTPPFYG------ 224

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                +     +  +   ++ G Y F   +W TISD+AKDLIR++L      R++A   L
Sbjct: 225 -----KN----EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275

Query: 419 KHPWIS 424
           +HPWI 
Sbjct: 276 EHPWIQ 281

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  180 bits (460), Expect = 5e-53
 Identities = 70/239 (29%), Positives = 103/239 (43%), Gaps = 60/239 (25%)

Query: 29  NKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPG 86
           +               F + Y +   +LGKG++  V  C + +T+ EYAVK+I+K     
Sbjct: 4   HHHHSSGRENLYFQGTFAERYNI-VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN 62

Query: 87  HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH-----------------------ER 123
              S + +EVE       HPNI++L E  ED  +                        E 
Sbjct: 63  KDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH 121

Query: 124 ----------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
                           HK  I HRDLKPENIL    ++   +K+ DF  G    F  +  
Sbjct: 122 DAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF--GLSTCFQQNT- 178

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
                  +   +G+A ++APE++          YD++CD+WS GV++YILL G PPFYG
Sbjct: 179 ------KMKDRIGTAYYIAPEVLR-------GTYDEKCDVWSAGVILYILLSGTPPFYG 224

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  198 bits (506), Expect = 7e-60
 Identities = 55/188 (29%), Positives = 78/188 (41%), Gaps = 42/188 (22%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H           Q + H+DLKPENIL       SP+K+ DF  G    F +        
Sbjct: 140 FH----------SQHVVHKDLKPENILFQDTSPHSPIKIIDF--GLAELFKSDE------ 181

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                  G+A +MAPE+              +CD+WS GVV+Y LL G  PF G      
Sbjct: 182 -HSTNAAGTALYMAPEVFK-------RDVTFKCDIWSAGVVMYFLLTGCLPFTG------ 227

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                 +     E +         ++   E   ++ +A DL++++L KD  +R SAA VL
Sbjct: 228 -----TS----LEEVQQKATYKEPNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277

Query: 419 KHPWISTA 426
            H W   A
Sbjct: 278 HHEWFKQA 285

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  173 bits (442), Expect = 2e-50
 Identities = 61/229 (26%), Positives = 84/229 (36%), Gaps = 63/229 (27%)

Query: 42  TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFH 100
                DL+      LG GA+  V       + LE  +K I+K        ++  E+E   
Sbjct: 17  QGTIDDLFIF-KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLK 75

Query: 101 HCQGHPNIIQLLEYYEDDENH---------------------------ER---------- 123
               HPNII++ E +ED  N                            E           
Sbjct: 76  SLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134

Query: 124 ------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                 H + + H+DLKPENIL       SP+K+ DF  G    F +             
Sbjct: 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF--GLAELFKSDE-------HSTN 185

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             G+A +MAPE+              +CD+WS GVV+Y LL G  PF G
Sbjct: 186 AAGTALYMAPEVFK-------RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  203 bits (519), Expect = 1e-59
 Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 48/233 (20%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          +  I HRDLKPENIL    ++   +K+ DF L +  + NT +      
Sbjct: 137 MH----------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK----- 181

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 +G+A ++APE++          YD++CD+WS GV++YILL G PPFYG      
Sbjct: 182 ----DRIGTAYYIAPEVLR-------GTYDEKCDVWSAGVILYILLSGTPPFYG------ 224

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                +     +  +   ++ G Y F   +W TISD+AKDLIR++L      R++A   L
Sbjct: 225 -----KN----EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275

Query: 419 KHPWI----STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFS 467
           +HPWI    S   T          +   +  +     A++A+     +    +
Sbjct: 276 EHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAAL---LYMASKLT 325

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  183 bits (467), Expect = 5e-52
 Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 60/224 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
           F + Y +   +LGKG++  V  C + +T+ EYAVK+I+K        S + +EVE     
Sbjct: 20  FAERYNI-VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78

Query: 103 QGHPNIIQLLEYYEDDENH-----------------------ER---------------- 123
             HPNI++L E  ED  +                        E                 
Sbjct: 79  -DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           HK  I HRDLKPENIL    ++   +K+ DF L +  + NT +            +G+A 
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK---------DRIGTAY 188

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           ++APE++          YD++CD+WS GV++YILL G PPFYG 
Sbjct: 189 YIAPEVLR-------GTYDEKCDVWSAGVILYILLSGTPPFYGK 225

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  199 bits (507), Expect = 1e-59
 Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 39/217 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL----GSGIKFNTSVHSPLATPLLLT 303
           H    GI HRDLKPEN+L    ++   +K+ DF      G      T             
Sbjct: 131 HE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----------- 177

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
             G+  ++APE+    +    +GY++  D WSLGV+++I L GYPPF             
Sbjct: 178 --GTPTYLAPEV---LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE----------- 221

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
              H  Q  L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+
Sbjct: 222 ---HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278

Query: 424 STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
                  +      ++     +  L        ++ +
Sbjct: 279 QDEDMKRKF---QDLLSEENESTALPQVLAQPSTSRK 312

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  172 bits (437), Expect = 2e-49
 Identities = 61/260 (23%), Positives = 93/260 (35%), Gaps = 83/260 (31%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEV 96
            +D Y +  + LG GA   V+      T  + A+KII K                V  E+
Sbjct: 8   LRDEYIM-SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66

Query: 97  ETFHHCQGHPNIIQLLEYYEDDENH----------------------ER----------- 123
           E       HP II++  +++ ++ +                      E            
Sbjct: 67  EILKKLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125

Query: 124 -----HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDL----GSGIKFNTSVHSPLATPL 173
                H+  I HRDLKPEN+L    ++   +K+ DF      G      T          
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC-------- 177

Query: 174 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW 233
                G+  ++APE+    +    +GY++  D WSLGV+++I L GYPPF          
Sbjct: 178 -----GTPTYLAPEV---LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE-------- 221

Query: 234 QRGETCHACQEILFHSIQQG 253
                 H  Q  L   I  G
Sbjct: 222 ------HRTQVSLKDQITSG 235

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  200 bits (511), Expect = 2e-59
 Identities = 61/181 (33%), Positives = 86/181 (47%), Gaps = 31/181 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q  I H DLKPENILCV+ D    +K+ DF L    K    +             G+ EF
Sbjct: 205 QMYILHLDLKPENILCVNRDA-KQIKIIDFGLARRYKPREKLK---------VNFGTPEF 254

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+VN              D+WS+GV+ Y+LL G  PF G           +      
Sbjct: 255 LAPEVVNY------DFVSFPTDMWSVGVIAYMLLSGLSPFLG-----------DN----D 293

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
               ++I    +D  + E+  IS+EAK+ I +LL+K+   R+SA+  LKHPW+S      
Sbjct: 294 AETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHS 353

Query: 431 R 431
           R
Sbjct: 354 R 354

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  176 bits (447), Expect = 3e-50
 Identities = 66/256 (25%), Positives = 96/256 (37%), Gaps = 59/256 (23%)

Query: 13  PVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRL-KGEILGKGAYASVQTCVNIL 71
           PV + +++A  ++             +         Y + K EILG G +  V  C    
Sbjct: 53  PVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETA 112

Query: 72  TELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH---------- 121
           T L+ A KII       +  V  E+   +    H N+IQL + +E   +           
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGG 171

Query: 122 --------------ER----------------HKR-IAHRDLKPENILCVHPDQLSPVKL 150
                         E                 H+  I H DLKPENILCV+ D    +K+
Sbjct: 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA-KQIKI 230

Query: 151 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG 210
            DF L    K    +             G+ EF+APE+VN              D+WS+G
Sbjct: 231 IDFGLARRYKPREKLK---------VNFGTPEFLAPEVVNY------DFVSFPTDMWSVG 275

Query: 211 VVVYILLCGYPPFYGN 226
           V+ Y+LL G  PF G+
Sbjct: 276 VIAYMLLSGLSPFLGD 291

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  202 bits (515), Expect = 9e-59
 Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 47/232 (20%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          +  I HRD+KPENIL  + + L  +K+ DF L S    +  +      
Sbjct: 162 LH----------KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR----- 206

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 +G+A ++APE++          Y+++CD+WS GV++YILLCGYPPF G      
Sbjct: 207 ----DRLGTAYYIAPEVLK-------KKYNEKCDVWSCGVIMYILLCGYPPFGG------ 249

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                +      + +   +++G Y F   +W  ISDEAK+LI+ +L  D  KR +A   L
Sbjct: 250 -----QN----DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300

Query: 419 KHPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFS 467
              WI   +              +   +        A++A+     I    +
Sbjct: 301 NSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAI---LFIGSKLT 349

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  177 bits (451), Expect = 1e-49
 Identities = 72/273 (26%), Positives = 104/273 (38%), Gaps = 79/273 (28%)

Query: 9   HHSVPVATSKSNAERIEEARNKRR--RKKTATSLVTSCFQDLYRLKGEILGKGAYASVQT 66
           HH    ++ + N      A N     RKK           + Y      LG GAY  V  
Sbjct: 2   HHHHHHSSGRENLYFQGIAINPGMYVRKKEGK------IGESYFK-VRKLGSGAYGEVLL 54

Query: 67  CVNILTELEYAVKIIDK-------------LPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
           C       E A+K+I K                     ++ E+        HPNII+L +
Sbjct: 55  CKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS-LDHPNIIKLFD 113

Query: 114 YYEDDENH-----------------------ER----------------HKR-IAHRDLK 133
            +ED +                         E                 HK  I HRD+K
Sbjct: 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIK 173

Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
           PENIL  + + L  +K+ DF L S    +  +            +G+A ++APE++    
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSFFSKDYKLR---------DRLGTAYYIAPEVLK--- 221

Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                 Y+++CD+WS GV++YILLCGYPPF G 
Sbjct: 222 ----KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  201 bits (512), Expect = 2e-58
 Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 47/232 (20%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          +  I HRDLKPEN+L     + + +++ DF L +  + +  +      
Sbjct: 142 MH----------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK----- 186

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 +G+A ++APE+++         YD++CD+WS GV++YILL G PPF G      
Sbjct: 187 ----DKIGTAYYIAPEVLH-------GTYDEKCDVWSTGVILYILLSGCPPFNG------ 229

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                      +  +   +++G Y F   +W  +S+ AKDLIR++L      R+SA   L
Sbjct: 230 -----AN----EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 280

Query: 419 KHPWISTA---GTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFS 467
            H WI T      +         I   +  +     A++A+     +    +
Sbjct: 281 DHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAAL---LYMGSKLT 329

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  179 bits (457), Expect = 1e-50
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 61/225 (27%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHH 101
           F D Y+    +LGKG++  V  C + +T  E AVK+I K        +  + +EV+    
Sbjct: 24  FSDRYKG-QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82

Query: 102 CQGHPNIIQLLEYYEDDENH-----------------------ER--------------- 123
              HPNI++L E++ED                           E                
Sbjct: 83  L-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141

Query: 124 -HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
            HK  I HRDLKPEN+L     + + +++ DF L +  + +  +            +G+A
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---------DKIGTA 192

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            ++APE+++         YD++CD+WS GV++YILL G PPF G 
Sbjct: 193 YYIAPEVLH-------GTYDEKCDVWSTGVILYILLSGCPPFNGA 230

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  199 bits (508), Expect = 9e-58
 Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 50/232 (21%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          +  I HRDLKPEN+L    ++ + +K+ DF L +  +    +      
Sbjct: 152 LH----------KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMK----- 196

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 +G+A ++APE++          YD++CD+WS+GV+++ILL GYPPF G      
Sbjct: 197 ----ERLGTAYYIAPEVLR-------KKYDEKCDVWSIGVILFILLAGYPPFGG------ 239

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                +T     + +   +++G Y F   EW  +S+ AKDLI+++L  D+++R+SA   L
Sbjct: 240 -----QT----DQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290

Query: 419 KHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMS-----ANRVILQH 465
           +HPWI    +        ++     +   +  F           A   +   
Sbjct: 291 EHPWIKEMCSK--KESGIELPSLANAIENMRKF--QNSQKLAQAALLYMASK 338

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  182 bits (463), Expect = 2e-51
 Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 60/253 (23%)

Query: 16  TSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELE 75
              S  E +    + +       +       ++Y+   + LG GAY  V  C + +T +E
Sbjct: 6   HHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQR-VKKLGSGAYGEVLLCRDKVTHVE 64

Query: 76  YAVKIIDK--LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH------------ 121
            A+KII K  +   S S++ +EV        HPNI++L +++ED  N+            
Sbjct: 65  RAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKGGEL 123

Query: 122 -----------ER----------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDF 153
                      E                 HK  I HRDLKPEN+L    ++ + +K+ DF
Sbjct: 124 FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDF 183

Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 213
            L +  +    +            +G+A ++APE++          YD++CD+WS+GV++
Sbjct: 184 GLSAVFENQKKMK---------ERLGTAYYIAPEVLR-------KKYDEKCDVWSIGVIL 227

Query: 214 YILLCGYPPFYGN 226
           +ILL GYPPF G 
Sbjct: 228 FILLAGYPPFGGQ 240

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  200 bits (510), Expect = 2e-57
 Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 33/227 (14%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +    H DLKPENI+       + +KL DF L + +    SV             G+AEF
Sbjct: 273 ENNYVHLDLKPENIMFTTKRS-NELKLIDFGLTAHLDPKQSVK---------VTTGTAEF 322

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE+                D+WS+GV+ YILL G  PF G           E      
Sbjct: 323 AAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGG-----------EN----D 361

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS--TAGT 428
           +    +++   ++  +  +S IS++ KD IR+LL+ D   R++    L+HPW++   A  
Sbjct: 362 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG 421

Query: 429 AHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDE 475
               + + +  +   S +         +     I  + S+ K+   E
Sbjct: 422 RDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQE 468

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  173 bits (440), Expect = 1e-47
 Identities = 60/257 (23%), Positives = 88/257 (34%), Gaps = 59/257 (22%)

Query: 10  HSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVN 69
             V    + S+          ++       +      D Y +  E LG GA+  V     
Sbjct: 120 KIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDI-HEELGTGAFGVVHRVTE 178

Query: 70  ILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH-------- 121
             T   +A K +       +  V KE++T    + HP ++ L + +EDD           
Sbjct: 179 RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMS 237

Query: 122 ----------------ER----------------HKR-IAHRDLKPENILCVHPDQLSPV 148
                           E                 H+    H DLKPENI+       + +
Sbjct: 238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS-NEL 296

Query: 149 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS 208
           KL DF L + +    SV             G+AEF APE+                D+WS
Sbjct: 297 KLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG------KPVGYYTDMWS 341

Query: 209 LGVVVYILLCGYPPFYG 225
           +GV+ YILL G  PF G
Sbjct: 342 VGVLSYILLSGLSPFGG 358

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  195 bits (498), Expect = 4e-57
 Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 26/174 (14%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + GI HRDLKPEN+L    ++   +K+ DF     +   +         L+ T  G+  +
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---------LMRTLCGTPTY 307

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++        +GY++  D WSLGV+++I L GYPPF                H  Q
Sbjct: 308 LAPEVLV---SVGTAGYNRAVDCWSLGVILFICLSGYPPFSE--------------HRTQ 350

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             L   I  G Y+F    W+ +S++A DL+++LLV D + R +    L+HPW+ 
Sbjct: 351 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  171 bits (435), Expect = 4e-48
 Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 75/262 (28%)

Query: 39  SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS-------- 90
           S+     +D Y +  + LG GA   V+      T  + A++II K      S        
Sbjct: 127 SVYPKALRDEYIM-SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL 185

Query: 91  RVFKEVETFHHCQGHPNIIQLLEYYEDDENH----------------------ER----- 123
            V  E+E       HP II++  +++ ++ +                      E      
Sbjct: 186 NVETEIEILKKLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244

Query: 124 -----------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                      H+  I HRDLKPEN+L    ++   +K+ DF     +   +        
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-------- 296

Query: 172 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
            L+ T  G+  ++APE++        +GY++  D WSLGV+++I L GYPPF        
Sbjct: 297 -LMRTLCGTPTYLAPEVLV---SVGTAGYNRAVDCWSLGVILFICLSGYPPFSE------ 346

Query: 232 GWQRGETCHACQEILFHSIQQG 253
                   H  Q  L   I  G
Sbjct: 347 --------HRTQVSLKDQITSG 360

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  165 bits (418), Expect = 3e-46
 Identities = 48/410 (11%), Positives = 100/410 (24%), Gaps = 88/410 (21%)

Query: 18  KSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLK-GEILGKGAYASVQTCVNILTELEY 76
           K  A  +E        +   T++ +   Q   +LK  E L  G  + V    ++    ++
Sbjct: 31  KEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDF 90

Query: 77  AVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK 133
           A+K+      +SRS   R+ +            +  +  +        +     +     
Sbjct: 91  ALKVFTMGAENSRSELERLHEATFAAARLL-GESPEEARDRRRLLLPSDAVAVQSQPPFA 149

Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
             +         + + L            +++            +      A +++    
Sbjct: 150 QLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTA-QLIRL-- 206

Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG 253
                                                          +          +G
Sbjct: 207 ------------------AAN------------------------LQS----------KG 214

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
           + H    P+N+          + L D    +  K  T                   +   
Sbjct: 215 LVHGHFTPDNLF---IMPDGRLMLGDV--SALWKVGTRGP---------ASSVPVTYAPR 260

Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
           E     +    + +    + W LG+ +Y + C + PF                       
Sbjct: 261 EF----LNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV----------TPGIKGSWKR 306

Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 G      G  + + D  K LI R L  D R+RL     ++ P  
Sbjct: 307 PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF 356

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  165 bits (418), Expect = 3e-46
 Identities = 55/449 (12%), Positives = 120/449 (26%), Gaps = 123/449 (27%)

Query: 10  HSVPVATSKSNAERIEEARNKR-----RRKKTATSLVTSCFQDLYRLK-GEILGKGAYAS 63
           + +P A  ++ +E ++ A +               + +   +    L  G +LG+    +
Sbjct: 29  NRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYA 88

Query: 64  VQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQLLEYYE---- 116
                +  T   + V +         +   ++ +EV      +G  N  Q   +      
Sbjct: 89  YLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 148

Query: 117 -DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCD-FDLGSGIKFNTSVHSPLATPLL 174
            D     + K++    L   ++  +    L P    +    G  +  ++S H  L     
Sbjct: 149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSL----- 203

Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
                +   +  +++                      +                      
Sbjct: 204 --VHHARLQLTLQVIRL--------------------LAS-------------------- 221

Query: 235 RGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 294
                H            G+ H  L+P +I+    DQ   V L  F     ++       
Sbjct: 222 ----LH----------HYGLVHTYLRPVDIVL---DQRGGVFLTGF--EHLVRDGA---- 258

Query: 295 PLATPLLLTPVGSAEFMAPEIVN-----AFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
                  +    S  F  PE+       ++     +      D W+LG+V+Y + C   P
Sbjct: 259 ------RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312

Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
              +                       I +   + P+          + L+   L     
Sbjct: 313 ITKD---------------AALGGSEWIFRSCKNIPQ--------PVRALLEGFLRYPKE 349

Query: 410 KRLSAASVLKHPWISTAGTAHRPLVTPQV 438
            RL     ++ P         R  ++  +
Sbjct: 350 DRLLPLQAMETPEY----EQLRTELSAAL 374

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  159 bits (404), Expect = 1e-44
 Identities = 49/237 (20%), Positives = 77/237 (32%), Gaps = 60/237 (25%)

Query: 43  SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHH 101
           S    L+ L  +ILG+GA A+V    +  T   +A+K+ +            +E E    
Sbjct: 5   STSNHLWLL-SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK 63

Query: 102 CQGHPNIIQLLEYYEDDENHE--------------------------------------- 122
              H NI++L    E+                                            
Sbjct: 64  LN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122

Query: 123 ------RHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                 R   I HR++KP NI+  +  D  S  KL DF     ++ +            +
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFV 173

Query: 176 TPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +  G+ E++ P++             Y    DLWS+GV  Y    G  PF    G  
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  146 bits (371), Expect = 5e-40
 Identities = 35/186 (18%), Positives = 60/186 (32%), Gaps = 22/186 (11%)

Query: 251 QQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           + GI HR++KP NI+  +  D  S  KL DF     ++ +            ++  G+ E
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVSLYGTEE 180

Query: 310 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ------ 361
           ++ P++             Y    DLWS+GV  Y    G  PF    G     +      
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240

Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTIS----DEAKDLIRRLLVKDARKRLSAASV 417
            G+   A   +         +        ++S         ++  +L  D  K       
Sbjct: 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

Query: 418 LKHPWI 423
                 
Sbjct: 301 FAETSD 306

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  161 bits (408), Expect = 4e-44
 Identities = 46/177 (25%), Positives = 67/177 (37%), Gaps = 25/177 (14%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    I HRDLKP NIL   P+    +K    D G   K     HS           G+
Sbjct: 135 HS--LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS---FSRRSGVPGT 189

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC 366
             ++APE+++              D++S G V Y ++  G  PF  +             
Sbjct: 190 EGWIAPEMLS---EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL------------ 234

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
              Q      +     D            A++LI +++  D +KR SA  VLKHP+ 
Sbjct: 235 ---QRQANILLGACSLDCLH-PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  145 bits (368), Expect = 1e-38
 Identities = 47/216 (21%), Positives = 72/216 (33%), Gaps = 51/216 (23%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL 111
             ++LG GA  ++     +    + AVK I        S   +EV+       HPN+I+ 
Sbjct: 28  PKDVLGHGAEGTI-VYRGMFDNRDVAVKRILP---ECFSFADREVQLLRESDEHPNVIRY 83

Query: 112 LEYYEDDENH----ER-----------------------------------HKR-IAHRD 131
               +D +      E                                    H   I HRD
Sbjct: 84  FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRD 143

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           LKP NIL   P+    +K    D G   K     HS           G+  ++APE+++ 
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS---FSRRSGVPGTEGWIAPEMLS- 199

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGN 226
                        D++S G V Y ++  G  PF  +
Sbjct: 200 --EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  157 bits (400), Expect = 7e-44
 Identities = 50/234 (21%), Positives = 92/234 (39%), Gaps = 35/234 (14%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q GI H DLKP N L V       +KL DF + + ++ +T+        +  + VG+  +
Sbjct: 126 QHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSV------VKDSQVGTVNY 175

Query: 311 MAPEIV-----NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           M PE +     +   G   S    + D+WSLG ++Y +  G  PF     +         
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------- 227

Query: 366 CHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
                  L   I   H  +FP+        + +D+++  L +D ++R+S   +L HP++ 
Sbjct: 228 -----SKLHAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278

Query: 425 TAGTAHRPLVTPQVIRRNQSARELSSF--AESAMSANRVILQHFSICKNPKDEQ 476
                   +             +L       S + A + + +H+S  ++     
Sbjct: 279 IQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSS 332

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  140 bits (354), Expect = 2e-37
 Identities = 46/223 (20%), Positives = 80/223 (35%), Gaps = 62/223 (27%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGH-PNI 108
             + +G G  + V   +N   ++ YA+K ++       +      E+   +  Q H   I
Sbjct: 13  ILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 71

Query: 109 IQLLEYYEDDEN-----------------------------------------HERHKRI 127
           I+L +Y   D+                                          H+    I
Sbjct: 72  IRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ--HGI 129

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            H DLKP N L V       +KL DF + + ++ +T+        +  + VG+  +M PE
Sbjct: 130 VHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSV------VKDSQVGTVNYMPPE 179

Query: 188 IV-----NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            +     +   G   S    + D+WSLG ++Y +  G  PF  
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  159 bits (405), Expect = 8e-44
 Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 38/191 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQL----------SPVKLCDFDLGSGIKFNTSVHSPLA 297
           HS    I HRDLKP+NIL     +             + + DF  G   K ++   S   
Sbjct: 132 HS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF--GLCKKLDSGQSSFRT 187

Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEAS-GYDKRCDLWSLGVVVYILLC-GYPPFYGNCG 355
              L  P G++ + APE++      +      +  D++S+G V Y +L  G  PF     
Sbjct: 188 N--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245

Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGE---WSTISDEAKDLIRRLLVKDARKRL 412
            +                   I +G +   E +     ++  EA DLI +++  D  KR 
Sbjct: 246 RESN-----------------IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288

Query: 413 SAASVLKHPWI 423
           +A  VL+HP  
Sbjct: 289 TAMKVLRHPLF 299

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  139 bits (352), Expect = 2e-36
 Identities = 46/242 (19%), Positives = 74/242 (30%), Gaps = 71/242 (29%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
            ++L     +ILG G+  +V            AVK +             E++       
Sbjct: 13  LKNLVVS-EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDD 67

Query: 105 HPNIIQLLEYYEDDEN-------------------------------------------- 120
           HPN+I+       D                                              
Sbjct: 68  HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127

Query: 121 ----HERHKRIAHRDLKPENILCVHPDQL----------SPVKLCDFDLGSGIKFNTSVH 166
               H    +I HRDLKP+NIL     +             + + DF  G   K ++   
Sbjct: 128 VAHLHSL--KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF--GLCKKLDSGQS 183

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS-GYDKRCDLWSLGVVVYILLC-GYPPFY 224
           S      L  P G++ + APE++      +      +  D++S+G V Y +L  G  PF 
Sbjct: 184 SFRTN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241

Query: 225 GN 226
             
Sbjct: 242 DK 243

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  158 bits (401), Expect = 2e-43
 Identities = 49/235 (20%), Positives = 77/235 (32%), Gaps = 60/235 (25%)

Query: 43  SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHH 101
           S    L+ L  +ILG+GA A+V    +  T   +A+K+ +            +E E    
Sbjct: 5   STSNHLWLL-SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKK 63

Query: 102 CQGHPNIIQLLEYYEDDENHE--------------------------------------- 122
              H NI++L    E+                                            
Sbjct: 64  LN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122

Query: 123 ------RHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                 R   I HR++KP NI+  +  D  S  KL DF     ++ +            +
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFV 173

Query: 176 TPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
           +  G+ E++ P++             Y    DLWS+GV  Y    G  PF    G
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG 228

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  134 bits (339), Expect = 6e-35
 Identities = 35/185 (18%), Positives = 60/185 (32%), Gaps = 22/185 (11%)

Query: 251 QQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           + GI HR++KP NI+  +  D  S  KL DF     ++ +            ++  G+ E
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVSLYGTEE 180

Query: 310 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ------ 361
           ++ P++             Y    DLWS+GV  Y    G  PF    G     +      
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240

Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTIS----DEAKDLIRRLLVKDARKRLSAASV 417
            G+   A   +         +        ++S         ++  +L  D  K       
Sbjct: 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

Query: 418 LKHPW 422
                
Sbjct: 301 FAETS 305

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  154 bits (392), Expect = 4e-43
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 33/179 (18%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q GI H DLKP N L V       +KL DF + + ++ +T+        +  + VG+  +
Sbjct: 145 QHGIVHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSV------VKDSQVGTVNY 194

Query: 311 MAPEIV-----NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           M PE +     +   G   S    + D+WSLG ++Y +  G  PF     +         
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------- 246

Query: 366 CHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                  L   I   H  +FP+        + +D+++  L +D ++R+S   +L HP++
Sbjct: 247 -----SKLHAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  139 bits (352), Expect = 2e-37
 Identities = 46/223 (20%), Positives = 80/223 (35%), Gaps = 62/223 (27%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGH-PNI 108
             + +G G  + V   +N   ++ YA+K ++       +      E+   +  Q H   I
Sbjct: 32  ILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 90

Query: 109 IQLLEYYEDDEN-----------------------------------------HERHKRI 127
           I+L +Y   D+                                          H+    I
Sbjct: 91  IRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ--HGI 148

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            H DLKP N L V       +KL DF + + ++ +T+        +  + VG+  +M PE
Sbjct: 149 VHSDLKPANFLIVDGM----LKLIDFGIANQMQPDTTSV------VKDSQVGTVNYMPPE 198

Query: 188 IV-----NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            +     +   G   S    + D+WSLG ++Y +  G  PF  
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  154 bits (391), Expect = 5e-43
 Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 38/198 (19%)

Query: 237 ETCHACQEILF-----HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL------GSG 285
           E     ++IL      HS  QGI HRDLKP NI     D+   VK+ DF L         
Sbjct: 117 EYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLD 171

Query: 286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
           I    S + P ++  L + +G+A ++A E+++         Y+++ D++SLG++ + ++ 
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD-----GTGHYNEKIDMYSLGIIFFEMI- 225

Query: 346 GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLV 405
            YP   G                 +  +   ++    +FP           K +IR L+ 
Sbjct: 226 -YPFSTGME---------------RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLID 269

Query: 406 KDARKRLSAASVLKHPWI 423
            D  KR  A ++L   W+
Sbjct: 270 HDPNKRPGARTLLNSGWL 287

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  124 bits (314), Expect = 4e-32
 Identities = 50/242 (20%), Positives = 86/242 (35%), Gaps = 73/242 (30%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
           +   +     +LG+GA+  V    N L    YA+K I        S +  EV        
Sbjct: 4   YASDFEE-IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLN- 60

Query: 105 HPNIIQL--------------------------LEYYE--------------DDENHER- 123
           H  +++                           +EY E                 +    
Sbjct: 61  HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120

Query: 124 ------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDL------GSGIKFNTS 164
                       H + I HRDLKP NI     D+   VK+ DF L         I    S
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDS 177

Query: 165 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
            + P ++  L + +G+A ++A E+++         Y+++ D++SLG++ + ++  YP   
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLD-----GTGHYNEKIDMYSLGIIFFEMI--YPFST 230

Query: 225 GN 226
           G 
Sbjct: 231 GM 232

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  153 bits (387), Expect = 1e-41
 Identities = 52/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q GI H DLKP N L V       +KL DF + + ++ +T+        +  + VG+  +
Sbjct: 173 QHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSV------VKDSQVGAVNY 222

Query: 311 MAPEIV-----NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           M PE +     +   G   S    + D+WSLG ++Y +  G  PF     +         
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------- 274

Query: 366 CHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI- 423
                  L   I   H  +FP+        + +D+++  L +D ++R+S   +L HP++ 
Sbjct: 275 -----SKLHAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

Query: 424 --STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQ 476
             +          T ++         L+S   S + A + + +H+S  ++     
Sbjct: 326 IQTHPVNQMAKGTTEEMKYVLGQLVGLNS-PNSILKAAKTLYEHYSGGESHNSSS 379

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  137 bits (346), Expect = 7e-36
 Identities = 49/270 (18%), Positives = 95/270 (35%), Gaps = 63/270 (23%)

Query: 5   GDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASV 64
           G     +      + + +  +   +   +  ++ +   S    +Y +  + +G G  + V
Sbjct: 14  GSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSI-LKQIGSGGSSKV 72

Query: 65  QTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGH-PNIIQLLEYYEDDEN- 120
              +N   ++ YA+K ++       +      E+   +  Q H   II+L +Y   D+  
Sbjct: 73  FQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 131

Query: 121 ----------------------------------------HERHKRIAHRDLKPENILCV 140
                                                   H+    I H DLKP N L V
Sbjct: 132 YMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ--HGIVHSDLKPANFLIV 189

Query: 141 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV-----NAFMGP 195
                  +KL DF + + ++ +T+        +  + VG+  +M PE +     +   G 
Sbjct: 190 D----GMLKLIDFGIANQMQPDTTSV------VKDSQVGAVNYMPPEAIKDMSSSRENGK 239

Query: 196 EASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             S    + D+WSLG ++Y +  G  PF  
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  148 bits (375), Expect = 6e-41
 Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 40/176 (22%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS  + + HRD+KPEN+L         +K+ DF          SVH+P  +       G+
Sbjct: 126 HS--KRVIHRDIKPENLLL---GSAGELKIADFGW--------SVHAP--SSRRTDLCGT 170

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            +++ PE++      E   +D++ DLWSLGV+ Y  L G PPF  N              
Sbjct: 171 LDYLPPEMI------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------------- 211

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
              +  +  I +  + FP      +++ A+DLI RLL  +  +R     VL+HPWI
Sbjct: 212 --YQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  130 bits (329), Expect = 2e-34
 Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 67/219 (30%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNII 109
           G  LGKG + +V       ++   A+K++ K          ++ +EVE   H + HPNI+
Sbjct: 14  GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72

Query: 110 QLLEYYEDDEN------------------------------------------HERHKRI 127
           +L  Y+ D                                             H +   +
Sbjct: 73  RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--V 130

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRD+KPEN+L         +K+ DF          SVH+P  +       G+ +++ PE
Sbjct: 131 IHRDIKPENLLL---GSAGELKIADFGW--------SVHAP--SSRRTDLCGTLDYLPPE 177

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           ++      E   +D++ DLWSLGV+ Y  L G PPF  N
Sbjct: 178 MI------EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  146 bits (371), Expect = 3e-40
 Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 40/191 (20%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H   + + HRD+KPEN+L  +  +L   K+ DF          SVH+P  +    T  G+
Sbjct: 131 HE--RKVIHRDIKPENLLMGYKGEL---KIADFGW--------SVHAP--SLRRRTMCGT 175

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            +++ PE++      E   +D++ DLW  GV+ Y  L G PPF                 
Sbjct: 176 LDYLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------------- 216

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG 427
                    I      FP      +SD +KDLI +LL     +RL    V++HPW+    
Sbjct: 217 --HTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270

Query: 428 TAHRPLVTPQV 438
               P V    
Sbjct: 271 RRVLPPVYQST 281

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  127 bits (322), Expect = 2e-33
 Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 67/218 (30%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNII 109
           G  LGKG + +V        +   A+K++ K          ++ +E+E   H + HPNI+
Sbjct: 19  GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 77

Query: 110 QLLEYYEDDEN------------------------------------------HERHKRI 127
           ++  Y+ D +                                           HER   +
Sbjct: 78  RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK--V 135

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRD+KPEN+L  +  +L   K+ DF          SVH+P  +    T  G+ +++ PE
Sbjct: 136 IHRDIKPENLLMGYKGEL---KIADFGW--------SVHAP--SLRRRTMCGTLDYLPPE 182

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           ++      E   +D++ DLW  GV+ Y  L G PPF  
Sbjct: 183 MI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  146 bits (369), Expect = 2e-39
 Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 47/192 (24%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+ ++ I HRD+KP NIL    D+   VKL DF          S +       +    G+
Sbjct: 168 HN-EKNICHRDVKPSNILM---DKNGRVKLSDFGE--------SEYMV--DKKIKGSRGT 213

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            EFM PE  +     E+S    + D+WSLG+ +Y++     PF                 
Sbjct: 214 YEFMPPEFFSN----ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS------------ 257

Query: 368 ACQEILFHSIQQGHYDFPE---------------GEWSTISDEAKDLIRRLLVKDARKRL 412
                LF++I+  + ++P                   + +S+E  D ++  L K+  +R+
Sbjct: 258 --LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315

Query: 413 SAASVLKHPWIS 424
           ++   LKH W++
Sbjct: 316 TSEDALKHEWLA 327

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  122 bits (307), Expect = 7e-31
 Identities = 47/280 (16%), Positives = 78/280 (27%), Gaps = 94/280 (33%)

Query: 13  PVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILT 72
           P+ + K             +  K     +     + YR+    L +G +  +  C     
Sbjct: 2   PLGSMKDILSNYSNLIYLNKYVKEKDKYI-----NDYRI-IRTLNQGKFNKIILCEK--D 53

Query: 73  ELEYAVKIIDK-----------------LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYY 115
              YA+K  +K                            E++     + +   +      
Sbjct: 54  NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYCLTCEGII 112

Query: 116 EDDEN--------------------------------------------------HERHK 125
            + +                                                   H   K
Sbjct: 113 TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH-NEK 171

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I HRD+KP NIL    D+   VKL DF          S +       +    G+ EFM 
Sbjct: 172 NICHRDVKPSNILM---DKNGRVKLSDFGE--------SEYMV--DKKIKGSRGTYEFMP 218

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           PE  +     E+S    + D+WSLG+ +Y++     PF  
Sbjct: 219 PEFFSN----ESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  147 bits (372), Expect = 6e-38
 Identities = 47/230 (20%), Positives = 75/230 (32%), Gaps = 67/230 (29%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQGH 105
             + +  E LG G +  V   ++  T  + A+K   + L   +R R   E++       H
Sbjct: 14  GPWEM-KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN-H 71

Query: 106 PNIIQLLEYYEDDEN-------------------------HERH---------------- 124
           PN++   E  +  +                           E                  
Sbjct: 72  PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131

Query: 125 --------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                    RI HRDLKPENI+     Q    K+ D      +             L   
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---------LCTE 182

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            VG+ +++APE++      E   Y    D WS G + +  + G+ PF  N
Sbjct: 183 FVGTLQYLAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  133 bits (336), Expect = 2e-33
 Identities = 47/266 (17%), Positives = 91/266 (34%), Gaps = 26/266 (9%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I HRDLKPENI+     Q    K+ D      +             L    VG+ ++
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---------LCTEFVGTLQY 189

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++      E   Y    D WS G + +  + G+ PF  N  +   W       + +
Sbjct: 190 LAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPN-WQPVQWHGKVREKSNE 242

Query: 371 EILFHSIQQGHYDF------PEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
            I+ +    G   F      P      ++ + +  ++ +L+   R+R +           
Sbjct: 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

Query: 425 -TAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTN 483
                    L++   +   +      +  E+  +    + Q   I   P++EQ L   + 
Sbjct: 303 ALDSILSLKLLSVMNMVSGRVHTYPVTENENLQNLKSWLQQDTGI---PEEEQELLQASG 359

Query: 484 MRLSPPSESLLVQRRQRLQSQSQSDN 509
           + L+             +    Q + 
Sbjct: 360 LALNSAQPLTQYVIDCTVIDGRQGEG 385

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  142 bits (358), Expect = 2e-37
 Identities = 58/441 (13%), Positives = 118/441 (26%), Gaps = 110/441 (24%)

Query: 7   SFHHSVPVATSKSNAERIEEARNKRRRKK----TATSLVTSCFQDLYRL--KGEILGKGA 60
              + +P A  ++ +E ++ A +               V S   +  R   +G +LG+  
Sbjct: 31  ELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQED 90

Query: 61  YASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQLLEYYE- 116
             +     +  T   + V +         +   ++ +EV      +G  N  Q   +   
Sbjct: 91  PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRF 150

Query: 117 ----DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCD-FDLGSGIKFNTSVHSPLAT 171
               D     + K++    L   ++  +    L P    +    G  +  ++S H  L  
Sbjct: 151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSL-- 208

Query: 172 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
                   +   +  +++                                          
Sbjct: 209 -----VHHARLQLTLQVIRLL--------------------------------------- 224

Query: 232 GWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
                 + H            G+ H  L+P +I+    DQ   V L  F     ++   S
Sbjct: 225 -----ASLHH----------YGLVHTYLRPVDIV---LDQRGGVFLTGF--EHLVRDGAS 264

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
             SP+            E  A  ++  F     +      D W+LG+ +Y + C   P  
Sbjct: 265 AVSPIGRG-----FAPPETTAERML-PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNT 318

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
            +                       I +   + P+          + L+   L      R
Sbjct: 319 DDAALG---------------GSEWIFRSCKNIPQ--------PVRALLEGFLRYPKEDR 355

Query: 412 LSAASVLKHPWISTAGTAHRP 432
           L     ++ P      T    
Sbjct: 356 LLPLQAMETPEYEQLRTELSA 376

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  135 bits (343), Expect = 2e-36
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 38/176 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRDL   N+L     +   +K+ DF L        +    +      T  G+
Sbjct: 129 HS--HGILHRDLTLSNLLL---TRNMNIKIADFGL--------ATQLKMPHEKHYTLCGT 175

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +++PEI         S +    D+WSLG + Y LL G PPF     +           
Sbjct: 176 PNYISPEIA------TRSAHGLESDVWSLGCMFYTLLIGRPPF-----DT---------- 214

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
              +   + +    Y+ P    S +S EAKDLI +LL ++   RLS +SVL HP++
Sbjct: 215 DTVKNTLNKVVLADYEMP----SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  124 bits (314), Expect = 2e-32
 Identities = 58/219 (26%), Positives = 86/219 (39%), Gaps = 63/219 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           +++ G +LGKG++A V    +I T LE A+K+IDK          RV  EV+     + H
Sbjct: 13  FKV-GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-H 70

Query: 106 PNIIQLLEYYEDDEN-----------------HERHKR---------------------- 126
           P+I++L  Y+ED                      R K                       
Sbjct: 71  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130

Query: 127 --IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             I HRDL   N+L     +   +K+ DF L        +    +      T  G+  ++
Sbjct: 131 HGILHRDLTLSNLLL---TRNMNIKIADFGL--------ATQLKMPHEKHYTLCGTPNYI 179

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +PEI         S +    D+WSLG + Y LL G PPF
Sbjct: 180 SPEIA------TRSAHGLESDVWSLGCMFYTLLIGRPPF 212

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  136 bits (345), Expect = 7e-36
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
            +  Q I HRD+KP+NIL    D+   V + DF++ + +   T + +   T         
Sbjct: 132 QN--QRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTK-------- 178

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE+ ++  G    GY    D WSLGV  Y LL G  P++                
Sbjct: 179 -PYMAPEMFSSRKGA---GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---------- 224

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK-HPW 422
              + + H+ +     +P    S  S E   L+++LL  +  +R S  S ++  P+
Sbjct: 225 --SKEIVHTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  101 bits (253), Expect = 2e-23
 Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 61/229 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHH 101
           F     L+   +GKG++  V       T+  YA+K ++K     R+ V   FKE++    
Sbjct: 14  FDHFEILR--AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71

Query: 102 CQGHPNIIQL-------------LEYYE--D-----------DENHER------------ 123
            + HP ++ L             ++     D            E   +            
Sbjct: 72  LE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130

Query: 124 -HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
              + I HRD+KP+NIL    D+   V + DF++ + +   T + +   T          
Sbjct: 131 LQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTK--------- 178

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
            +MAPE+ ++  G    GY    D WSLGV  Y LL G  P++      
Sbjct: 179 PYMAPEMFSSRKGA---GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS 224

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  133 bits (338), Expect = 2e-35
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 42/181 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H   +GI HRDLKPENIL    ++   +++ DF      K  +            + VG+
Sbjct: 147 HG--KGIIHRDLKPENILL---NEDMHIQITDFGTA---KVLSPESKQARA---NSFVGT 195

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
           A++++PE++            K  DLW+LG ++Y L+ G PPF      +          
Sbjct: 196 AQYVSPELL------TEKSACKSSDLWALGCIIYQLVAGLPPFR---AGN---------- 236

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVLKHP 421
             + ++F  I +  YDFPE        +A+DL+ +LLV DA KRL          +  HP
Sbjct: 237 --EYLIFQKIIKLEYDFPEK----FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHP 290

Query: 422 W 422
           +
Sbjct: 291 F 291

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  109 bits (274), Expect = 1e-26
 Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 78/262 (29%)

Query: 13  PVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILT 72
             A  +  A  ++ A+   + +K          +D    K  ILG+G++++V     + T
Sbjct: 4   TAAEPRPGAGSLQHAQPPPQPRKK-------RPEDFKFGK--ILGEGSFSTVVLARELAT 54

Query: 73  ELEYAVKIIDKLPGHSRSRVFKEVETFH--------HCQGHPNIIQL------------- 111
             EYA+KI++K        + KE +  +            HP  ++L             
Sbjct: 55  SREYAIKILEK------RHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 108

Query: 112 LEYYED-------------DENHER-------------HKR-IAHRDLKPENILCVHPDQ 144
           L Y ++             DE   R             H + I HRDLKPENIL    ++
Sbjct: 109 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NE 165

Query: 145 LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 204
              +++ DF      K  +            + VG+A++++PE++            K  
Sbjct: 166 DMHIQITDFGTA---KVLSPESKQARA---NSFVGTAQYVSPELL------TEKSACKSS 213

Query: 205 DLWSLGVVVYILLCGYPPFYGN 226
           DLW+LG ++Y L+ G PPF   
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAG 235

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  132 bits (335), Expect = 5e-35
 Identities = 40/176 (22%), Positives = 61/176 (34%), Gaps = 27/176 (15%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS---GIKFNTSVHSPLATPLLLTPVGS 307
            +G AHRDLKP NIL     Q     L D   GS              L          +
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQ---PVLMDL--GSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             + APE+ +          D+R D+WSLG V+Y ++ G  P+         +Q+G++  
Sbjct: 207 ISYRAPELFS---VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV------FQKGDS-- 255

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                      Q     P+      S     L+  ++  D  +R     +L     
Sbjct: 256 ------VALAVQNQLSIPQ--SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEA 303

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  120 bits (304), Expect = 1e-30
 Identities = 48/225 (21%), Positives = 71/225 (31%), Gaps = 60/225 (26%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
            + LG+G ++ V     +     YA+K I       R    +E +  H    HPNI++L+
Sbjct: 34  IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD-MHRLFNHPNILRLV 92

Query: 113 EYYEDDENHERH------------------------------------------------ 124
            Y   +   +                                                  
Sbjct: 93  AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS---GIKFNTSVHSPLATPLLLTPVGSA 181
           K  AHRDLKP NIL     Q     L D   GS              L          + 
Sbjct: 153 KGYAHRDLKPTNILLGDEGQ---PVLMDL--GSMNQACIHVEGSRQALTLQDWAAQRCTI 207

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            + APE+ +          D+R D+WSLG V+Y ++ G  P+   
Sbjct: 208 SYRAPELFS---VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  130 bits (330), Expect = 2e-34
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 35/177 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H   Q I HRD+KP N+L     +   +K+ DF + +  K + +        LL   VG+
Sbjct: 154 HY--QKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEFKGSDA--------LLSNTVGT 200

Query: 308 AEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
             FMAPE ++         +  K  D+W++GV +Y  + G  PF                
Sbjct: 201 PAFMAPESLSE----TRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC--------- 247

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 L   I+    +FP+     I+++ KDLI R+L K+   R+    +  HPW+
Sbjct: 248 ------LHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  107 bits (270), Expect = 3e-26
 Identities = 51/243 (20%), Positives = 86/243 (35%), Gaps = 85/243 (34%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------------------------- 83
           Y L  + +GKG+Y  V+   N      YA+K++ K                         
Sbjct: 15  YTL-KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 84  -LPGHSRSRVFKEVETFHHCQGHPNIIQL---------------LEYYE-----DDENHE 122
             P     +V++E+        HPN+++L                E        +    +
Sbjct: 74  IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132

Query: 123 R--------------------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 161
                                H + I HRD+KP N+L     +   +K+ DF + +  K 
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEFKG 189

Query: 162 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGY 220
           + +        LL   VG+  FMAPE ++         +  K  D+W++GV +Y  + G 
Sbjct: 190 SDA--------LLSNTVGTPAFMAPESLSE----TRKIFSGKALDVWAMGVTLYCFVFGQ 237

Query: 221 PPF 223
            PF
Sbjct: 238 CPF 240

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  131 bits (332), Expect = 2e-34
 Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 37/192 (19%)

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS------GIKFNT 290
           +TC A Q +  H  +  I HRDLK EN+L  +      +KLCDF  GS         ++ 
Sbjct: 144 QTCRAVQHM--HRQKPPIIHRDLKVENLLLSNQGT---IKLCDF--GSATTISHYPDYSW 196

Query: 291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
           S          +T   +  +  PEI++ +         ++ D+W+LG ++Y+L     PF
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSN---FPIGEKQDIWALGCILYLLCFRQHPF 253

Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
                                     I  G Y  P     T       LIR +L  +  +
Sbjct: 254 EDG-------------------AKLRIVNGKYSIPP--HDTQYTVFHSLIRAMLQVNPEE 292

Query: 411 RLSAASVLKHPW 422
           RLS A V+    
Sbjct: 293 RLSIAEVVHQLQ 304

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  125 bits (316), Expect = 4e-32
 Identities = 48/236 (20%), Positives = 81/236 (34%), Gaps = 67/236 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
            R++  +L +G +A V    ++ +  EYA+K +          + +EV       GHPNI
Sbjct: 30  LRVR-RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 109 IQL--------------------LEYYED----------------DEN------------ 120
           +Q                     L                       +            
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148

Query: 121 ----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS------GIKFNTSVHSPLA 170
               H +   I HRDLK EN+L  +      +KLCDF  GS         ++ S      
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGT---IKLCDF--GSATTISHYPDYSWSAQRRAL 203

Query: 171 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
               +T   +  +  PEI++ +         ++ D+W+LG ++Y+L     PF   
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSN---FPIGEKQDIWALGCILYLLCFRQHPFEDG 256

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  130 bits (328), Expect = 3e-34
 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 46/185 (24%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          +  + HRDLK  N+     ++   VK+ DF L + ++++         
Sbjct: 131 LH----------RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 170

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                  G+  ++APE++         G+    D+WS+G ++Y LL G PPF     E  
Sbjct: 171 -RKKVLCGTPNYIAPEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ET- 217

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                    +C +  +  I++  Y  P      I+  A  LI+++L  D   R +   +L
Sbjct: 218 ---------SCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELL 264

Query: 419 KHPWI 423
              + 
Sbjct: 265 NDEFF 269

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  122 bits (309), Expect = 2e-31
 Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 62/218 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           Y   G  LGKG +A      +  T+  +A KI+ K   L  H R ++  E+        H
Sbjct: 17  YVR-GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-H 74

Query: 106 PNIIQLLEYYEDDEN----------------HERHKR----------------------- 126
            +++    ++ED++                 H+R K                        
Sbjct: 75  QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            + HRDLK  N+     ++   VK+ DF L + ++++                G+  ++A
Sbjct: 135 RVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE--------RKKVLCGTPNYIA 183

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE++         G+    D+WS+G ++Y LL G PPF
Sbjct: 184 PEVL------SKKGHSFEVDVWSIGCIMYTLLVGKPPF 215

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  129 bits (326), Expect = 1e-33
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 36/173 (20%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  + HRDLK  N+     ++   VK+ DF L + ++++                G+  +
Sbjct: 159 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE--------RKKVLCGTPNY 207

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE+++        G+    D+WS+G ++Y LL G PPF     E           +C 
Sbjct: 208 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPF-----ET----------SCL 246

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           +  +  I++  Y  P      I+  A  LI+++L  D   R +   +L   + 
Sbjct: 247 KETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  125 bits (317), Expect = 3e-32
 Identities = 52/258 (20%), Positives = 91/258 (35%), Gaps = 65/258 (25%)

Query: 13  PVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLK----GEILGKGAYASVQTCV 68
           P       A     A             +     D    +    G  LGKG +A      
Sbjct: 2   PAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEIS 61

Query: 69  NILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN----- 120
           +  T+  +A KI+ K   L  H R ++  E+        H +++    ++ED++      
Sbjct: 62  DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVL 120

Query: 121 -----------HERHKR------------------------IAHRDLKPENILCVHPDQL 145
                      H+R K                         + HRDLK  N+     ++ 
Sbjct: 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NED 177

Query: 146 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD 205
             VK+ DF L + ++++                G+  ++APE+++        G+    D
Sbjct: 178 LEVKIGDFGLATKVEYDGE--------RKKVLCGTPNYIAPEVLSK------KGHSFEVD 223

Query: 206 LWSLGVVVYILLCGYPPF 223
           +WS+G ++Y LL G PPF
Sbjct: 224 VWSIGCIMYTLLVGKPPF 241

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  127 bits (322), Expect = 2e-33
 Identities = 50/185 (27%), Positives = 74/185 (40%), Gaps = 40/185 (21%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH             + HRDLKP N+     D    VKL DF L   +  +TS       
Sbjct: 127 CHRR-----SDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK---- 174

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
               T VG+  +M+PE +          Y+++ D+WSLG ++Y L    PPF        
Sbjct: 175 ----TFVGTPYYMSPEQM------NRMSYNEKSDIWSLGCLLYELCALMPPFTAF----- 219

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                      Q+ L   I++G +          SDE  ++I R+L      R S   +L
Sbjct: 220 ----------SQKELAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

Query: 419 KHPWI 423
           ++P I
Sbjct: 267 ENPLI 271

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  117 bits (295), Expect = 8e-30
 Identities = 50/233 (21%), Positives = 75/233 (32%), Gaps = 72/233 (30%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQG 104
           + Y      +G G+Y   Q             K +D   +    +  +  EV      + 
Sbjct: 6   EDYE-VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK- 63

Query: 105 HPNIIQLLEYYEDDEN-------------------------------------------- 120
           HPNI++  +   D  N                                            
Sbjct: 64  HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123

Query: 121 ----HERHK---RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPL 173
               H R      + HRDLKP N+     D    VKL DF L   +  +TS         
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK------ 174

Query: 174 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             T VG+  +M+PE +          Y+++ D+WSLG ++Y L    PPF   
Sbjct: 175 --TFVGTPYYMSPEQM------NRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  130 bits (329), Expect = 2e-33
 Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 31/175 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             G  HRD+KP+N+L    D+   +KL DF     +     V          T VG+ ++
Sbjct: 186 SMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRC-------DTAVGTPDY 235

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           ++PE++ +        Y + CD WS+GV +Y +L G  PFY +           T     
Sbjct: 236 ISPEVLKS--QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-------SLVGT---YS 283

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
           +I+ H   +    FP+     IS EAK+LI   L  D   RL       + +H +
Sbjct: 284 KIMNH---KNSLTFPDDND--ISKEAKNLICAFL-TDREVRLGRNGVEEIKRHLF 332

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  109 bits (273), Expect = 6e-26
 Identities = 55/259 (21%), Positives = 93/259 (35%), Gaps = 70/259 (27%)

Query: 17  SKSNAERIEEARNKRRRKKTATSLVTS---CFQDLYRLKGEILGKGAYASVQTCVNILTE 73
                 + +   N   R K   + +       +D   +K  ++G+GA+  VQ   +  T 
Sbjct: 37  DFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVK--VIGRGAFGEVQLVRHKSTR 94

Query: 74  LEYAVKIIDKLPGHSRSRVFKEVETFH--------HCQGHPNIIQL-------------L 112
             YA+K++ K        + K  ++               P ++QL             +
Sbjct: 95  KVYAMKLLSK------FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148

Query: 113 EYYED------------DENHER-------------HKR-IAHRDLKPENILCVHPDQLS 146
           EY                E   R             H     HRD+KP+N+L    D+  
Sbjct: 149 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSG 205

Query: 147 PVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
            +KL DF     +     V          T VG+ ++++PE++ +        Y + CD 
Sbjct: 206 HLKLADFGTCMKMNKEGMVRC-------DTAVGTPDYISPEVLKS--QGGDGYYGRECDW 256

Query: 207 WSLGVVVYILLCGYPPFYG 225
           WS+GV +Y +L G  PFY 
Sbjct: 257 WSVGVFLYEMLVGDTPFYA 275

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  128 bits (324), Expect = 2e-33
 Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 50/187 (26%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          Q+ I HRDLK EN+L    D    +K+ DF   +              
Sbjct: 130 CH----------QKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG-------- 168

Query: 299 PLLLTPVGSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
             L    G+  + APE+     + GPE        D+WSLGV++Y L+ G  PF      
Sbjct: 169 -KLDAFCGAPPYAAPELFQGKKYDGPEV-------DVWSLGVILYTLVSGSLPF------ 214

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                 G+        L   + +G Y  P      +S + ++L++R LV +  KR +   
Sbjct: 215 -----DGQNLKE----LRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQ 261

Query: 417 VLKHPWI 423
           ++K  WI
Sbjct: 262 IMKDRWI 268

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  119 bits (301), Expect = 4e-30
 Identities = 65/219 (29%), Positives = 92/219 (42%), Gaps = 65/219 (29%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           YRL  + +GKG +A V+   +ILT  E A+KIIDK  L   S  ++F+EV        HP
Sbjct: 17  YRL-LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HP 74

Query: 107 NIIQLLEYYEDDE-------------------NHER--------------------HKR- 126
           NI++L E  E ++                    H R                    H++ 
Sbjct: 75  NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK EN+L    D    +K+ DF   +                L    G+  + AP
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG---------KLDAFCGAPPYAAP 182

Query: 187 EIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E+     + GPE        D+WSLGV++Y L+ G  PF
Sbjct: 183 ELFQGKKYDGPEV-------DVWSLGVILYTLVSGSLPF 214

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  131 bits (330), Expect = 2e-33
 Identities = 56/175 (32%), Positives = 81/175 (46%), Gaps = 29/175 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           Q    HRD+KP+NIL    D    ++L DF     +  + +V S          VG+ ++
Sbjct: 193 QLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQS-------SVAVGTPDY 242

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           ++PEI+ A M      Y   CD WSLGV +Y +L G  PFY            ET     
Sbjct: 243 ISPEILQA-MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-------SLVET---YG 291

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
           +I+ H   +  + FP  + + +S+ AKDLIRRL+      RL         KHP+
Sbjct: 292 KIMNH---KERFQFPT-QVTDVSENAKDLIRRLICSRE-HRLGQNGIEDFKKHPF 341

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  109 bits (274), Expect = 6e-26
 Identities = 64/261 (24%), Positives = 95/261 (36%), Gaps = 71/261 (27%)

Query: 17  SKSNAERIEEARNKRRRKKTATSLVTS---CFQDLYRLKGEILGKGAYASVQTCVNILTE 73
           + S   R +         K  TS V       +D   LK  ++G+GA+  V        +
Sbjct: 42  NNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILK--VIGRGAFGEVAVVKLKNAD 99

Query: 74  LEYAVKIIDKLPGHSRSRVFKEVETFH--------HCQGHPNIIQL-------------L 112
             +A+KI++K        + K  ET                 I  L             +
Sbjct: 100 KVFAMKILNK------WEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153

Query: 113 EYY------------ED--DENHER-------------HKR-IAHRDLKPENILCVHPDQ 144
           +YY            ED   E   R             H+    HRD+KP+NIL    D 
Sbjct: 154 DYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DM 210

Query: 145 LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 204
              ++L DF     +  + +V S          VG+ ++++PEI+ A M      Y   C
Sbjct: 211 NGHIRLADFGSCLKLMEDGTVQS-------SVAVGTPDYISPEILQA-MEGGKGRYGPEC 262

Query: 205 DLWSLGVVVYILLCGYPPFYG 225
           D WSLGV +Y +L G  PFY 
Sbjct: 263 DWWSLGVCMYEMLYGETPFYA 283

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  127 bits (321), Expect = 4e-33
 Identities = 41/176 (23%), Positives = 68/176 (38%), Gaps = 41/176 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS  QG+ H D+KP NI           KL DF  G  ++  T               G 
Sbjct: 174 HS--QGLVHLDVKPANIFL---GPRGRCKLGDF--GLLVELGT-------AGAGEVQEGD 219

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +MAPE++          Y    D++SLG+ +  + C     +G  GE           
Sbjct: 220 PRYMAPELLQ-------GSYGTAADVFSLGLTILEVACNMELPHG--GEG---------- 260

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                 +  ++QG    P    + +S E + ++  +L  D + R +A ++L  P +
Sbjct: 261 ------WQQLRQG--YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  118 bits (297), Expect = 7e-30
 Identities = 53/276 (19%), Positives = 84/276 (30%), Gaps = 80/276 (28%)

Query: 9   HHSVPVATSKSN--AERIEEARNKRRRKKTATSLVT-----------SCFQDLYRLKGEI 55
           HHS  V     N   + + + + +R   +   S              S FQ  ++ +   
Sbjct: 6   HHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQ-RLSR 64

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
           LG G+Y  V    +      YAVK           R+R   EV +      HP  ++L +
Sbjct: 65  LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124

Query: 114 YYEDDEN------------------------------------------HERHKRIAHRD 131
            +E+                                             H +   + H D
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ--GLVHLD 182

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           +KP NI           KL DF  G  ++  T               G   +MAPE++  
Sbjct: 183 VKPANIFL---GPRGRCKLGDF--GLLVELGT-------AGAGEVQEGDPRYMAPELLQ- 229

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYP-PFYGN 226
                   Y    D++SLG+ +  + C    P  G 
Sbjct: 230 ------GSYGTAADVFSLGLTILEVACNMELPHGGE 259

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  128 bits (324), Expect = 4e-33
 Identities = 51/246 (20%), Positives = 88/246 (35%), Gaps = 45/246 (18%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H   + I HRD+K +NI  +  D    V+L DF +   +     +            +G+
Sbjct: 142 HD--RKILHRDIKSQNIF-LTKDGT--VQLGDFGIARVLNSTVELAR--------ACIGT 188

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +++PEI       E   Y+ + D+W+LG V+Y L      F                 
Sbjct: 189 PYYLSPEIC------ENKPYNNKSDIWALGCVLYELCTLKHAFEAG-------------- 228

Query: 368 ACQEILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
              + L   I  G +           S + + L+ +L  ++ R R S  S+L+  +I+  
Sbjct: 229 -SMKNLVLKIISGSFPPVSLH----YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283

Query: 427 GTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMRL 486
                  ++PQ+I      +  S F    + A R      SI   P  +    T    + 
Sbjct: 284 I---EKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQK---ITKPAAKY 337

Query: 487 SPPSES 492
             P   
Sbjct: 338 GIPLAY 343

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  115 bits (289), Expect = 2e-28
 Identities = 43/221 (19%), Positives = 82/221 (37%), Gaps = 66/221 (29%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHPNII 109
           + + +G+G++       +     +Y +K I+  ++    R    +EV    + + HPNI+
Sbjct: 28  RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIV 86

Query: 110 QLLEYYEDDEN--------------------------------------------HERHK 125
           Q  E +E++ +                                            H+R  
Sbjct: 87  QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-- 144

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           +I HRD+K +NI  +  D    V+L DF +   +     +            +G+  +++
Sbjct: 145 KILHRDIKSQNIF-LTKDGT--VQLGDFGIARVLNSTVELAR--------ACIGTPYYLS 193

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PEI       E   Y+ + D+W+LG V+Y L      F   
Sbjct: 194 PEIC------ENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  128 bits (324), Expect = 4e-33
 Identities = 48/186 (25%), Positives = 67/186 (36%), Gaps = 40/186 (21%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH             I HRDLK EN L +       +K+CDF        ++        
Sbjct: 132 CH----------SMQICHRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHS-------- 172

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGED 357
               + VG+  ++APE++          YD K  D+WS GV +Y++L G  PF       
Sbjct: 173 -QPKSTVGTPAYIAPEVL------LRQEYDGKIADVWSCGVTLYVMLVGAYPF------- 218

Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
                              I    Y  P+     IS E   LI R+ V D   R+S   +
Sbjct: 219 ----EDPEEPRDYRKTIQRILSVKYSIPDDIR--ISPECCHLISRIFVADPATRISIPEI 272

Query: 418 LKHPWI 423
             H W 
Sbjct: 273 KTHSWF 278

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  112 bits (283), Expect = 2e-27
 Identities = 53/216 (24%), Positives = 81/216 (37%), Gaps = 60/216 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
           Y    + +G G +   +   + LT+   AVK I++        V +E+   H    HPNI
Sbjct: 22  YDF-VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIIN-HRSLRHPNI 78

Query: 109 IQL-------------LEYYEDDE------NHER--------------------HKR-IA 128
           ++              +EY    E      N  R                    H   I 
Sbjct: 79  VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQIC 138

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRDLK EN L +       +K+CDF        ++            + VG+  ++APE+
Sbjct: 139 HRDLKLENTL-LDGSPAPRLKICDFGYSKSSVLHS---------QPKSTVGTPAYIAPEV 188

Query: 189 VNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPF 223
           +          YD K  D+WS GV +Y++L G  PF
Sbjct: 189 L------LRQEYDGKIADVWSCGVTLYVMLVGAYPF 218

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  128 bits (324), Expect = 1e-32
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 29/176 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G  HRD+KP+NIL    D+   ++L DF     ++ + +V S       L  VG+ ++
Sbjct: 180 RLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRS-------LVAVGTPDY 229

Query: 311 MAPEIVNAFMGPEASG-YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           ++PEI+ A  G   +G Y   CD W+LGV  Y +  G  PFY +          ET    
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-------STAET---Y 279

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPW 422
            +I+ +   + H   P  +   + +EA+D I+RLL      RL    A     HP+
Sbjct: 280 GKIVHY---KEHLSLPLVD-EGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPF 330

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  107 bits (268), Expect = 3e-25
 Identities = 59/262 (22%), Positives = 95/262 (36%), Gaps = 71/262 (27%)

Query: 17  SKSNAERIEEARNKRRRKKTATSLVTS---CFQDLYRLKGEILGKGAYASVQTCVNILTE 73
             S   + +   +  +  +     +        D   LK  ++G+GA++ V       T 
Sbjct: 29  GASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILK--VIGRGAFSEVAVVKMKQTG 86

Query: 74  LEYAVKIIDKLPGHSRSRVFKEVETFHH--------CQGHPNIIQL-------------L 112
             YA+KI++K        + K  E                  I QL             +
Sbjct: 87  QVYAMKIMNK------WDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140

Query: 113 EYY------------ED--DENHER-------------HKR-IAHRDLKPENILCVHPDQ 144
           EYY             +       R             H+    HRD+KP+NIL    D+
Sbjct: 141 EYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DR 197

Query: 145 LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG-YDKR 203
              ++L DF     ++ + +V S       L  VG+ ++++PEI+ A  G   +G Y   
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRS-------LVAVGTPDYLSPEILQAVGGGPGTGSYGPE 250

Query: 204 CDLWSLGVVVYILLCGYPPFYG 225
           CD W+LGV  Y +  G  PFY 
Sbjct: 251 CDWWALGVFAYEMFYGQTPFYA 272

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  124 bits (313), Expect = 3e-32
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 44/187 (23%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H            GI HRD+KPEN+L    D+   +K+ DF L +  ++N         
Sbjct: 121 LH----------GIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER----- 162

Query: 299 PLLLTPVGSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            LL    G+  ++APE++    F            D+WS G+V+  +L G  P+     +
Sbjct: 163 -LLNKMCGTLPYVAPELLKRREFHAEPV-------DVWSCGIVLTAMLAGELPW-----D 209

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                  ++C       +   ++         W  I      L+ ++LV++   R++   
Sbjct: 210 Q----PSDSCQ-----EYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPD 258

Query: 417 VLKHPWI 423
           + K  W 
Sbjct: 259 IKKDRWY 265

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  114 bits (289), Expect = 5e-29
 Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 63/219 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           + L  + LG+GAY  VQ  VN +TE   AVKI+D           + KE+   +    H 
Sbjct: 9   WDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICI-NKMLNHE 65

Query: 107 NIIQL-------------LEYYEDDE------NHER--------------------HKR- 126
           N+++              LEY    E                              H   
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+KPEN+L    D+   +K+ DF L +  ++N          LL    G+  ++AP
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER------LLNKMCGTLPYVAP 176

Query: 187 EIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E++    F            D+WS G+V+  +L G  P+
Sbjct: 177 ELLKRREFHAEPV-------DVWSCGIVLTAMLAGELPW 208

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  125 bits (316), Expect = 3e-32
 Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 43/183 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L H  Q+GI +RDLKPENI+    +    VKL DF L    I   T  H+   T      
Sbjct: 134 LGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTI----- 185

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
               E+MAPEI+        SG+++  D WSLG ++Y +L G PPF    GE+       
Sbjct: 186 ----EYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFT---GEN------- 225

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLK 419
                ++     I +   + P      ++ EA+DL+++LL ++A  RL      A  V  
Sbjct: 226 -----RKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276

Query: 420 HPW 422
           HP+
Sbjct: 277 HPF 279

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 91.1 bits (227), Expect = 3e-20
 Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 79/225 (35%)

Query: 56  LGKGAYASV---QTCVNILTELEYAVKIIDK--------LPGHSRS--RVFKEVETFHHC 102
           LGKG Y  V   +      T   +A+K++ K           H+++   + +EV+     
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK----- 79

Query: 103 QGHPNIIQL-------------LEY----------YED---DENHER------------- 123
             HP I+ L             LEY            +    E+                
Sbjct: 80  --HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137

Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSA 181
           H++ I +RDLKPENI+    +    VKL DF L    I   T  H+   T          
Sbjct: 138 HQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTI--------- 185

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E+MAPEI+        SG+++  D WSLG ++Y +L G PPF G 
Sbjct: 186 EYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGE 224

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  125 bits (315), Expect = 6e-32
 Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 46/180 (25%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS    + +RDLKPEN+L    DQ   +++ DF     +K  T            T  G+
Sbjct: 158 HS--LDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRTW-----------TLCGT 201

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            E +APEI+       + GY+K  D W+LGV++Y +  GYPPF+    +           
Sbjct: 202 PEALAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---ADQ---------- 242

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPW 422
                ++  I  G   FP    S  S + KDL+R LL  D  KR          +  H W
Sbjct: 243 --PIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  100 bits (252), Expect = 2e-23
 Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 78/259 (30%)

Query: 17  SKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEY 76
            +S  E + +A+    +K    S  T+      R+K   LG G++  V    +  +   Y
Sbjct: 12  QESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIK--TLGTGSFGRVMLVKHKESGNHY 69

Query: 77  AVKIIDKLP-------GHSRS--RVFKEVETFHHCQGHPNIIQLLEYYEDDEN------- 120
           A+KI+DK          H+ +  R+ + V         P +++L   ++D+ N       
Sbjct: 70  AMKILDKQKVVKLKQIEHTLNEKRILQAVN-------FPFLVKLEFSFKDNSNLYMVMEY 122

Query: 121 --------HERHKR-------------------------IAHRDLKPENILCVHPDQLSP 147
                   H R                            + +RDLKPEN+L    DQ   
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179

Query: 148 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW 207
           +++ DF     +K  T            T  G+ E +APEI+       + GY+K  D W
Sbjct: 180 IQVTDFGFAKRVKGRTW-----------TLCGTPEALAPEII------LSKGYNKAVDWW 222

Query: 208 SLGVVVYILLCGYPPFYGN 226
           +LGV++Y +  GYPPF+ +
Sbjct: 223 ALGVLIYEMAAGYPPFFAD 241

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  124 bits (313), Expect = 7e-32
 Identities = 48/213 (22%), Positives = 77/213 (36%), Gaps = 47/213 (22%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            + I HRD+K ENI+     +   +KL DF   + ++            L  T  G+ E+
Sbjct: 148 LKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERG---------KLFYTFCGTIEY 195

Query: 311 MAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
            APE++  N + GPE        ++WSLGV +Y L+    PF                  
Sbjct: 196 CAPEVLMGNPYRGPEL-------EMWSLGVTLYTLVFEENPFCE---------------- 232

Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
                     +     P      +S E   L+  LL     +R +   ++  PW+ T   
Sbjct: 233 -----LEETVEAAIHPP----YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV-TQPV 282

Query: 429 AHRPLVTPQVIRRNQSARELSSFAESAMSANRV 461
                   +V R N+    + S A   M    +
Sbjct: 283 NLADYTWEEVFRVNKPESGVLSAASLEMGNRSL 315

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  123 bits (310), Expect = 2e-31
 Identities = 55/228 (24%), Positives = 84/228 (36%), Gaps = 72/228 (31%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFH 100
           Y      LG GA+  V T V+     E  VK I K        +      +V  E+    
Sbjct: 26  YST-MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 101 HCQGHPNIIQLLEYYEDD--------------------ENHER----------------- 123
             + H NII++L+ +E+                     + H R                 
Sbjct: 85  RVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143

Query: 124 ---HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
                + I HRD+K ENI+     +   +KL DF   + ++            L  T  G
Sbjct: 144 GYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERG---------KLFYTFCG 191

Query: 180 SAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           + E+ APE++  N + GPE        ++WSLGV +Y L+    PF  
Sbjct: 192 TIEYCAPEVLMGNPYRGPEL-------EMWSLGVTLYTLVFEENPFCE 232

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  123 bits (312), Expect = 8e-32
 Identities = 55/271 (20%), Positives = 94/271 (34%), Gaps = 74/271 (27%)

Query: 7   SFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQT 66
           S HH    ++            N     K A        +  Y++ G +LG G + SV +
Sbjct: 3   SSHHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQV-GPLLGSGGFGSVYS 61

Query: 67  CVNILTELEYAVKIIDK------LPGHSRSRVFKEVE---TFHHCQGHPNIIQLLEYYED 117
            + +   L  A+K ++K          + +RV  EV          G   +I+LL+++E 
Sbjct: 62  GIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS--GFSGVIRLLDWFER 119

Query: 118 D--------------------ENHER--------------------HKR-IAHRDLKPEN 136
                                                         H   + HRD+K EN
Sbjct: 120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 179

Query: 137 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA--FMG 194
           IL +  ++   +KL DF  G+ +K            +     G+  +  PE +    + G
Sbjct: 180 IL-IDLNRGE-LKLIDFGSGALLKDT----------VYTDFDGTRVYSPPEWIRYHRYHG 227

Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             A        +WSLG+++Y ++CG  PF  
Sbjct: 228 RSA-------AVWSLGILLYDMVCGDIPFEH 251

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  122 bits (307), Expect = 4e-31
 Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 56/187 (29%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH            G+ HRD+K ENIL +  ++   +KL DF  G+ +K           
Sbjct: 165 CH----------NCGVLHRDIKDENIL-IDLNRGE-LKLIDFGSGALLKDT--------- 203

Query: 299 PLLLTPVGSAEFMAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            +     G+  +  PE +    + G  A        +WSLG+++Y ++CG  PF  +   
Sbjct: 204 -VYTDFDGTRVYSPPEWIRYHRYHGRSA-------AVWSLGILLYDMVCGDIPFEHD--- 252

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                               I +G   F       +S E + LIR  L      R +   
Sbjct: 253 ------------------EEIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEE 290

Query: 417 VLKHPWI 423
           +  HPW+
Sbjct: 291 IQNHPWM 297

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  123 bits (311), Expect = 8e-32
 Identities = 47/180 (26%), Positives = 68/180 (37%), Gaps = 42/180 (23%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS  QGI H+D+KP N+L         +K+    +   +    +           T  GS
Sbjct: 126 HS--QGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADD------TCRTSQGS 174

Query: 308 AEFMAPEIVN---AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG-NCGEDCGWQRG 363
             F  PEI N    F G +        D+WS GV +Y +  G  PF G N  +       
Sbjct: 175 PAFQPPEIANGLDTFSGFKV-------DIWSAGVTLYNITTGLYPFEGDNIYK------- 220

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                    LF +I +G Y  P            DL++ +L  +  KR S   + +H W 
Sbjct: 221 ---------LFENIGKGSYAIPG--D--CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  108 bits (272), Expect = 2e-26
 Identities = 51/227 (22%), Positives = 80/227 (35%), Gaps = 68/227 (29%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK----LPGHSRSRVFKEVETFHHCQG 104
           Y + G++LG+G+Y  V+  ++  T    AVKI+ K       +  + V KE++     + 
Sbjct: 7   YLM-GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64

Query: 105 HPNIIQL---------------LEYYED--------------DENHERH----------- 124
           H N+IQL               +EY                                   
Sbjct: 65  HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124

Query: 125 ---KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
              + I H+D+KP N+L         +K+    +   +    +           T  GS 
Sbjct: 125 LHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADD------TCRTSQGSP 175

Query: 182 EFMAPEIVN---AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            F  PEI N    F G +        D+WS GV +Y +  G  PF G
Sbjct: 176 AFQPPEIANGLDTFSGFKV-------DIWSAGVTLYNITTGLYPFEG 215

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  124 bits (314), Expect = 9e-32
 Identities = 60/181 (33%), Positives = 81/181 (44%), Gaps = 36/181 (19%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
            H    GI +RD+K ENIL    D    V L DF L    K   +  +  A        G
Sbjct: 175 LHK--LGIIYRDIKLENILL---DSNGHVVLTDFGLS---KEFVADETERAY----DFCG 222

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
           + E+MAP+IV        SG+DK  D WSLGV++Y LL G  PF             +  
Sbjct: 223 TIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFT-----------VDGE 267

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
              Q  +   I +    +P      +S  AKDLI+RLL+KD +KRL      A  + +H 
Sbjct: 268 KNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323

Query: 422 W 422
           +
Sbjct: 324 F 324

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 91.6 bits (228), Expect = 3e-20
 Identities = 67/274 (24%), Positives = 100/274 (36%), Gaps = 75/274 (27%)

Query: 5   GDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASV 64
           G S   +   A      E++   +++ R             ++   LK  +LG GAY  V
Sbjct: 13  GSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLK--VLGTGAYGKV 70

Query: 65  ---QTCVNILTELEYAVKII--------DKLPGHSRS--RVFKEVETFHHCQGHPNIIQL 111
              +      T   YA+K++         K   H+R+  +V + +         P ++ L
Sbjct: 71  FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR------QSPFLVTL 124

Query: 112 -------------LEYYED-------------DENHER-------------HKR-IAHRD 131
                        L+Y                 E+  +             HK  I +RD
Sbjct: 125 HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRD 184

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           +K ENIL    D    V L DF L    K   +  +  A        G+ E+MAP+IV  
Sbjct: 185 IKLENILL---DSNGHVVLTDFGLS---KEFVADETERAY----DFCGTIEYMAPDIVRG 234

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
                 SG+DK  D WSLGV++Y LL G  PF  
Sbjct: 235 ----GDSGHDKAVDWWSLGVLMYELLTGASPFTV 264

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  122 bits (308), Expect = 1e-31
 Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 50/187 (26%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +  + HRDLKPEN+L    D     K+ DF L + +            
Sbjct: 127 CH----------RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE-------- 165

Query: 299 PLLLTPVGSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
             L T  GS  + APE+++   + GPE        D+WS GV++Y LLCG  PF      
Sbjct: 166 -FLRTSCGSPNYAAPEVISGRLYAGPEV-------DIWSCGVILYALLCGTLPF------ 211

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                  E        LF  I+ G +  PE  +  ++     L+  +L  D  KR +   
Sbjct: 212 -----DDEHVPT----LFKKIRGGVFYIPE--Y--LNRSVATLLMHMLQVDPLKRATIKD 258

Query: 417 VLKHPWI 423
           + +H W 
Sbjct: 259 IREHEWF 265

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  111 bits (280), Expect = 9e-28
 Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 66/220 (30%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           Y L G+ LG G +  V+   + LT  + AVKI+++          ++ +E++     + H
Sbjct: 13  YVL-GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-H 70

Query: 106 PNIIQL-------------LEYYEDDE------NHER--------------------HKR 126
           P+II+L             +EY    E       H R                    H+ 
Sbjct: 71  PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            + HRDLKPEN+L    D     K+ DF L + +              L T  GS  + A
Sbjct: 131 MVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE---------FLRTSCGSPNYAA 178

Query: 186 PEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE+++   + GPE        D+WS GV++Y LLCG  PF
Sbjct: 179 PEVISGRLYAGPEV-------DIWSCGVILYALLCGTLPF 211

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  123 bits (311), Expect = 1e-31
 Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 45/182 (24%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPV 305
            HS   GI +RDLKPENIL    D+   +KL DF L    I      +S   T       
Sbjct: 142 LHS--LGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTV------ 190

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E+MAPE+VN        G+ +  D WS GV+++ +L G  PF    G+D        
Sbjct: 191 ---EYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQ---GKD-------- 230

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
               ++     I +     P      +S EA+ L+R L  ++   RL         + +H
Sbjct: 231 ----RKETMTMILKAKLGMP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282

Query: 421 PW 422
            +
Sbjct: 283 SF 284

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 91.8 bits (229), Expect = 1e-20
 Identities = 53/223 (23%), Positives = 82/223 (36%), Gaps = 77/223 (34%)

Query: 56  LGKGAYASV---QTCVNILTELEYAVK------IIDKLPGHSRS--RVFKEVETFHHCQG 104
           LG+G++  V   +          YA+K      +  +    ++    +  EV        
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------- 84

Query: 105 HPNIIQL-------------LEY----------YED---DENHER-------------HK 125
           HP I++L             L++           ++    E   +             H 
Sbjct: 85  HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144

Query: 126 R-IAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEF 183
             I +RDLKPENIL    D+   +KL DF L    I      +S   T          E+
Sbjct: 145 LGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTV---------EY 192

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           MAPE+VN        G+ +  D WS GV+++ +L G  PF G 
Sbjct: 193 MAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGK 229

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  123 bits (311), Expect = 1e-31
 Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 46/180 (25%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS  + I +RDLKPENIL    D+   +K+ DF     +   T            T  G+
Sbjct: 123 HS--KDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVTY-----------TLCGT 166

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            +++APE+V+         Y+K  D WS G+++Y +L GY PFY     +          
Sbjct: 167 PDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFY---DSN---------- 207

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPW 422
                 +  I      FP       +++ KDL+ RL+ +D  +RL         V  HPW
Sbjct: 208 --TMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 91.8 bits (229), Expect = 1e-20
 Identities = 53/230 (23%), Positives = 85/230 (36%), Gaps = 78/230 (33%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-------GHSRS--RVFKEV 96
           QD   L+   LG G++  V    +      YA+K++ K          H+     +   V
Sbjct: 6   QDFQILR--TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63

Query: 97  ETFHHCQGHPNIIQLLEYYEDDEN---------------HERHKR--------------- 126
                   HP II++   ++D +                  R  +               
Sbjct: 64  T-------HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116

Query: 127 ----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                     I +RDLKPENIL    D+   +K+ DF     +   T            T
Sbjct: 117 LALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVTY-----------T 162

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             G+ +++APE+V+         Y+K  D WS G+++Y +L GY PFY +
Sbjct: 163 LCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDS 206

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  122 bits (309), Expect = 2e-31
 Identities = 52/233 (22%), Positives = 83/233 (35%), Gaps = 72/233 (30%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRSRVFKEVE- 97
           F+  YRL G +LGKG + +V     +   L+ A+K+I +       P         EV  
Sbjct: 29  FEAEYRL-GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87

Query: 98  --TFHHCQGHPNIIQLLEYYEDD--------------------ENHER------------ 123
                   GHP +I+LL+++E                                       
Sbjct: 88  LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ 147

Query: 124 --------HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
                   H R + HRD+K ENIL +   +    KL DF  G+ +               
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENIL-IDLRRGC-AKLIDFGSGALLHDE----------PY 195

Query: 175 LTPVGSAEFMAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
               G+  +  PE ++   +    A        +WSLG+++Y ++CG  PF  
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPA-------TVWSLGILLYDMVCGDIPFER 241

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  120 bits (303), Expect = 1e-30
 Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 57/199 (28%)

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           + CH           +G+ HRD+K ENIL +   +    KL DF  G+ +          
Sbjct: 153 QHCH----------SRGVVHRDIKDENIL-IDLRRGC-AKLIDFGSGALLHDE------- 193

Query: 297 ATPLLLTPVGSAEFMAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
                    G+  +  PE ++   +    A        +WSLG+++Y ++CG  PF  + 
Sbjct: 194 ---PYTDFDGTRVYSPPEWISRHQYHALPA-------TVWSLGILLYDMVCGDIPFERD- 242

Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
                                 I +    FP    + +S +   LIRR L      R S 
Sbjct: 243 --------------------QEILEAELHFP----AHVSPDCCALIRRCLAPKPSSRPSL 278

Query: 415 ASVLKHPWISTAGTAHRPL 433
             +L  PW+        PL
Sbjct: 279 EEILLDPWM-QTPAEDVPL 296

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  122 bits (309), Expect = 2e-31
 Identities = 45/226 (19%), Positives = 83/226 (36%), Gaps = 44/226 (19%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H            GI HRD+KPEN+L    D+   +K+ DF L +  ++N         
Sbjct: 121 LH----------GIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER----- 162

Query: 299 PLLLTPVGSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            LL    G+  ++APE++    F            D+WS G+V+  +L G  P+     +
Sbjct: 163 -LLNKMCGTLPYVAPELLKRREFHAEPV-------DVWSCGIVLTAMLAGELPW-----D 209

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                  ++C       +   ++         W  I      L+ ++LV++   R++   
Sbjct: 210 Q----PSDSCQ-----EYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPD 258

Query: 417 VLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVI 462
           + K  W +                 ++S    S   +S +  + V 
Sbjct: 259 IKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVN 304

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  114 bits (287), Expect = 3e-28
 Identities = 56/219 (25%), Positives = 85/219 (38%), Gaps = 63/219 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           + L  + LG+GAY  VQ  VN +TE   AVKI+D           + KE+   +    H 
Sbjct: 9   WDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICI-NKMLNHE 65

Query: 107 NIIQL-------------LEYYEDDE------NHER--------------------HKR- 126
           N+++              LEY    E                              H   
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+KPEN+L    D+   +K+ DF L +  ++N          LL    G+  ++AP
Sbjct: 126 ITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER------LLNKMCGTLPYVAP 176

Query: 187 EIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E++    F            D+WS G+V+  +L G  P+
Sbjct: 177 ELLKRREFHAEPV-------DVWSCGIVLTAMLAGELPW 208

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  121 bits (306), Expect = 9e-31
 Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 50/187 (26%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +  I HRDLKPEN+L    D    VK+ DF L + +            
Sbjct: 124 CH----------RHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN-------- 162

Query: 299 PLLLTPVGSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
             L T  GS  + APE++N   + GPE        D+WS G+V+Y++L G  PF      
Sbjct: 163 -FLKTSCGSPNYAAPEVINGKLYAGPEV-------DVWSCGIVLYVMLVGRLPFDD---- 210

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                  E        LF  +    Y  P+  +  +S  A+ LIRR++V D  +R++   
Sbjct: 211 -------EFIPN----LFKKVNSCVYVMPD--F--LSPGAQSLIRRMIVADPMQRITIQE 255

Query: 417 VLKHPWI 423
           + + PW 
Sbjct: 256 IRRDPWF 262

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  112 bits (282), Expect = 1e-27
 Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 65/219 (29%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           Y +  E LG+G++  V+   +  T+ + A+K I +          RV +E+      + H
Sbjct: 11  YII-RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-H 68

Query: 106 PNIIQLLEYYEDDE------------------NHER--------------------HKR- 126
           P+II+L +                          +R                    H+  
Sbjct: 69  PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLKPEN+L    D    VK+ DF L + +              L T  GS  + AP
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN---------FLKTSCGSPNYAAP 176

Query: 187 EIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E++N   + GPE        D+WS G+V+Y++L G  PF
Sbjct: 177 EVINGKLYAGPEV-------DVWSCGIVLYVMLVGRLPF 208

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  125 bits (316), Expect = 1e-30
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 39/182 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H   + + +RDLKP NIL    D+   V++ D  L        +       P     V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGL--------ACDFSKKKPH--ASV 351

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D        
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-------- 398

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
               +  +         + P+    + S E + L+  LL +D  +RL      A  V + 
Sbjct: 399 ----KHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450

Query: 421 PW 422
           P+
Sbjct: 451 PF 452

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 92.6 bits (230), Expect = 6e-20
 Identities = 50/227 (22%), Positives = 79/227 (34%), Gaps = 75/227 (33%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFH-----------HCQ 103
           I+G+G +  V  C    T   YA+K +DK       R+  +                   
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDK------KRIKMKQGETLALNERIMLSLVSTG 249

Query: 104 GHPNIIQL-------------LEY----------YED---DENHER-------------H 124
             P I+ +             L+            +     E   R             H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309

Query: 125 KR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
            R + +RDLKP NIL    D+   V++ D  L        +       P     VG+  +
Sbjct: 310 NRFVVYRDLKPANILL---DEHGHVRISDLGL--------ACDFSKKKPH--ASVGTHGY 356

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 357 MAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  122 bits (307), Expect = 7e-30
 Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 39/183 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L H  Q+ I +RDLKPEN+L    D    V++ D  L        T              
Sbjct: 302 LEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTK---------GY 349

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
            G+  FMAPE++          YD   D ++LGV +Y ++    PF          +  E
Sbjct: 350 AGTPGFMAPELLLG------EEYDFSVDYFALGVTLYEMIAARGPFR---ARGEKVENKE 400

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLK 419
                   L   + +    +P+      S  +KD    LL KD  KRL     S   +  
Sbjct: 401 --------LKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448

Query: 420 HPW 422
           HP 
Sbjct: 449 HPL 451

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 89.5 bits (222), Expect = 4e-19
 Identities = 48/225 (21%), Positives = 73/225 (32%), Gaps = 79/225 (35%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---------RVFKEVETFHHCQGH 105
           +LG+G +  V  C    T   YA K ++K     R          ++  +V         
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-------S 244

Query: 106 PNIIQL-------------LEY----------YEDDENHER------------------- 123
             I+ L             +            Y  DE++                     
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304

Query: 124 -HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGS 180
            H+R I +RDLKPEN+L    D    V++ D  L        T               G+
Sbjct: 305 LHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTK---------GYAGT 352

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
             FMAPE++          YD   D ++LGV +Y ++    PF  
Sbjct: 353 PGFMAPELLLG------EEYDFSVDYFALGVTLYEMIAARGPFRA 391

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  118 bits (298), Expect = 1e-29
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 43/183 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L +   + + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP     
Sbjct: 118 LEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP----- 169

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
               E++APE++      E + Y +  D W LGVV+Y ++CG  PFY    +D       
Sbjct: 170 ----EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQD------- 209

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLK 419
                 E LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++
Sbjct: 210 -----HERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260

Query: 420 HPW 422
           H +
Sbjct: 261 HRF 263

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 86.9 bits (216), Expect = 7e-19
 Identities = 56/221 (25%), Positives = 85/221 (38%), Gaps = 75/221 (33%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLP-------GHSRS--RVFKEVETFHHCQGHP 106
           LGKG +  V       T   YA+KI+ K          H+ +  RV +          HP
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-------HP 65

Query: 107 NIIQL-------------LEYYEDDE-----NHER---------------------HKR- 126
            +  L             +EY    E     + ER                     H R 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           + +RD+K EN++    D+   +K+ DF L   GI    ++ +   TP         E++A
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EYLA 173

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PE++      E + Y +  D W LGVV+Y ++CG  PFY  
Sbjct: 174 PEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  121 bits (306), Expect = 1e-29
 Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 38/182 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L    ++ I +RDLKPENIL    D    +++ D  L   +    ++            V
Sbjct: 299 LEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIK---------GRV 346

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE+V          Y    D W+LG ++Y ++ G  PF          +R E 
Sbjct: 347 GTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQ---QRKKKIKREE- 396

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
                  +   +++   ++ E      S +A+ L  +LL KD  +RL     SA  V +H
Sbjct: 397 -------VERLVKEVPEEYSE----RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445

Query: 421 PW 422
           P 
Sbjct: 446 PL 447

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 89.1 bits (221), Expect = 5e-19
 Identities = 47/223 (21%), Positives = 73/223 (32%), Gaps = 76/223 (34%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---------RVFKEVETFHHCQGH 105
           +LGKG +  V  C    T   YA K ++K     R          ++ ++V         
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-------S 243

Query: 106 PNIIQL-------------LEY----------YED-----DENHER-------------H 124
             ++ L             L            Y        E                 H
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303

Query: 125 KR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
           +  I +RDLKPENIL    D    +++ D  L   +    ++            VG+  +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIK---------GRVGTVGY 351

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           MAPE+V          Y    D W+LG ++Y ++ G  PF   
Sbjct: 352 MAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQR 388

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  118 bits (297), Expect = 2e-29
 Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 39/179 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L     +GI +RDLK +NIL    D+   +K+ DF +    +  +   ++   TP     
Sbjct: 131 LQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTP----- 182

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
               +++APEI+          Y+   D WS GV++Y +L G  PF+   G+D       
Sbjct: 183 ----DYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFH---GQD------- 222

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-SAASVLKHPW 422
                +E LFHSI+  +  +P      +  EAKDL+ +L V++  KRL     + +HP 
Sbjct: 223 -----EEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 86.1 bits (214), Expect = 2e-18
 Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 62/215 (28%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQL- 111
           LGKG++  V       T   +A+K + K        V     E         HP +  + 
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84

Query: 112 ------------LEYY-----------ED--DENHER-------------HKR-IAHRDL 132
                       +EY                D +                H + I +RDL
Sbjct: 85  CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL 144

Query: 133 KPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           K +NIL    D+   +K+ DF +    +  +   ++   TP         +++APEI+  
Sbjct: 145 KLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTP---------DYIAPEILLG 192

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                   Y+   D WS GV++Y +L G  PF+G 
Sbjct: 193 ------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  120 bits (302), Expect = 2e-29
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 44/182 (24%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPV 305
            HS ++ + +RDLK EN++    D+   +K+ DF L   GIK   ++ +   TP      
Sbjct: 264 LHS-EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP------ 313

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE++      E + Y +  D W LGVV+Y ++CG  PFY    +D        
Sbjct: 314 ---EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQD-------- 353

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
                E LF  I      FP     T+  EAK L+  LL KD ++RL      A  +++H
Sbjct: 354 ----HEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405

Query: 421 PW 422
            +
Sbjct: 406 RF 407

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 89.0 bits (221), Expect = 4e-19
 Identities = 64/272 (23%), Positives = 100/272 (36%), Gaps = 83/272 (30%)

Query: 6   DSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQ 65
            +       + S S+    EE      + K   ++      +   LK  +LGKG +  V 
Sbjct: 113 QAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTM-----NEFEYLK--LLGKGTFGKVI 165

Query: 66  TCVNILTELEYAVKIIDK-------LPGHSRS--RVFKEVETFHHCQGHPNIIQL----- 111
                 T   YA+KI+ K          H+ +  RV +          HP +  L     
Sbjct: 166 LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-------HPFLTALKYSFQ 218

Query: 112 --------LEYY-----------ED--DENHER---------------HKRIAHRDLKPE 135
                   +EY            E    E+  R                K + +RDLK E
Sbjct: 219 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278

Query: 136 NILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
           N++    D+   +K+ DF L   GIK   ++ +   TP         E++APE++     
Sbjct: 279 NLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP---------EYLAPEVL----- 321

Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            E + Y +  D W LGVV+Y ++CG  PFY  
Sbjct: 322 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  120 bits (302), Expect = 2e-29
 Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 50/187 (26%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +  + HRDLKPEN+L    D     K+ DF L + +            
Sbjct: 132 CH----------RHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE-------- 170

Query: 299 PLLLTPVGSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
             L T  GS  + APE+++   + GPE        D+WS GV++Y LLCG  PF      
Sbjct: 171 -FLRTSCGSPNYAAPEVISGRLYAGPEV-------DIWSSGVILYALLCGTLPF------ 216

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                  +        LF  I  G +  P+  +  ++     L++ +L  D  KR +   
Sbjct: 217 -----DDDHVPT----LFKKICDGIFYTPQ--Y--LNPSVISLLKHMLQVDPMKRATIKD 263

Query: 417 VLKHPWI 423
           + +H W 
Sbjct: 264 IREHEWF 270

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  110 bits (276), Expect = 4e-26
 Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 66/220 (30%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           Y L G+ LG G +  V+   + LT  + AVKI+++          ++ +E++     + H
Sbjct: 18  YIL-GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-H 75

Query: 106 PNIIQL-------------LEYYEDDE------NHER--------------------HKR 126
           P+II+L             +EY    E       + R                    H+ 
Sbjct: 76  PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            + HRDLKPEN+L    D     K+ DF L + +              L T  GS  + A
Sbjct: 136 MVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE---------FLRTSCGSPNYAA 183

Query: 186 PEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE+++   + GPE        D+WS GV++Y LLCG  PF
Sbjct: 184 PEVISGRLYAGPEV-------DIWSSGVILYALLCGTLPF 216

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  118 bits (297), Expect = 2e-29
 Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 43/183 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           LF    +GI +RDLK +N++    D    +K+ DF +    I    +  +   TP     
Sbjct: 134 LFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKTFCGTP----- 185

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
               +++APEI+          Y K  D W+ GV++Y +L G  PF    GED       
Sbjct: 186 ----DYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFE---GED------- 225

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLK 419
                ++ LF SI + +  +P     ++S EA  + + L+ K   KRL         + +
Sbjct: 226 -----EDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276

Query: 420 HPW 422
           H +
Sbjct: 277 HAF 279

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 87.7 bits (218), Expect = 4e-19
 Identities = 50/215 (23%), Positives = 74/215 (34%), Gaps = 62/215 (28%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQL- 111
           LGKG++  V       T+  YAVKI+ K        V     E          P + QL 
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87

Query: 112 ------------LEYY-----------ED--DENHER-------------HKR-IAHRDL 132
                       +EY                 E H                 + I +RDL
Sbjct: 88  SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147

Query: 133 KPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           K +N++    D    +K+ DF +    I    +  +   TP         +++APEI+  
Sbjct: 148 KLDNVML---DSEGHIKIADFGMCKENIWDGVTTKTFCGTP---------DYIAPEIIAY 195

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                   Y K  D W+ GV++Y +L G  PF G 
Sbjct: 196 ------QPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  118 bits (297), Expect = 2e-29
 Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 44/181 (24%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPV 305
            HS    I +RDLKPENIL    D    + L DF L    I+ N++  +   TP      
Sbjct: 155 LHS--LNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTP------ 203

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E++APE+++         YD+  D W LG V+Y +L G PPFY     +        
Sbjct: 204 ---EYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFY---SRN-------- 243

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL----SAASVLKHP 421
                  ++ +I              I++ A+ L+  LL KD  KRL        +  H 
Sbjct: 244 ----TAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHV 295

Query: 422 W 422
           +
Sbjct: 296 F 296

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 89.2 bits (222), Expect = 2e-19
 Identities = 57/215 (26%), Positives = 83/215 (38%), Gaps = 62/215 (28%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
           +GKG++  V    +   E+ YAVK++ K   L       +  E         HP ++ L 
Sbjct: 46  IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105

Query: 112 ------------LEY----------YED---DENHER-------------HKR-IAHRDL 132
                       L+Y            +    E   R             H   I +RDL
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 165

Query: 133 KPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           KPENIL    D    + L DF L    I+ N++  +   TP         E++APE+++ 
Sbjct: 166 KPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTP---------EYLAPEVLHK 213

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                   YD+  D W LG V+Y +L G PPFY  
Sbjct: 214 ------QPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  116 bits (293), Expect = 3e-29
 Identities = 62/399 (15%), Positives = 125/399 (31%), Gaps = 93/399 (23%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-KLPGHSRSRVFKEVETFHHCQ 103
           +   +    + +G+G +  V    N + +  YA+K I       +R +V +EV+     +
Sbjct: 4   YLTDFE-PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 62

Query: 104 GHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT 163
            HP I++    + +    +  + +    LK E+                           
Sbjct: 63  -HPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPS---------VKI 112

Query: 164 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL--LCGYP 221
               P +T   +  +                             S  V +YI   LC   
Sbjct: 113 RRMDPFSTKNTVGQLQP--------------------------SSPKVYLYIQMQLC--- 143

Query: 222 PFYGNCGEDCGW---QRGETCHACQEIL--FHSIQQGIAH--------RDLKPENILCVH 268
                      W   +           L  F  I + +          RDLKP NI    
Sbjct: 144 ----RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIF-FT 198

Query: 269 PDQLSPVKLCDF----DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA 324
            D +  VK+ DF     +    +  T +    A       VG+  +M+PE +        
Sbjct: 199 MDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI------HG 250

Query: 325 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDF 384
           + Y  + D++SLG++++ LL  +             +R          +   ++     F
Sbjct: 251 NNYSHKVDIFSLGLILFELLYSFSTQM---------ERVR--------IITDVRNLK--F 291

Query: 385 PEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
           P   ++    +   +++ +L     +R  A  ++++   
Sbjct: 292 PL-LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  117 bits (295), Expect = 4e-29
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 35/184 (19%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L +  ++GI +RDLK +N+L    D    +KL D+ +   G++   +  +   TP     
Sbjct: 123 LNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP----- 174

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
                ++APEI+          Y    D W+LGV+++ ++ G  PF      D   Q  E
Sbjct: 175 ----NYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE 224

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVL 418
                 + LF  I +     P     ++S +A  +++  L KD ++RL        A + 
Sbjct: 225 ------DYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ 274

Query: 419 KHPW 422
            HP+
Sbjct: 275 GHPF 278

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 87.7 bits (218), Expect = 4e-19
 Identities = 55/240 (22%), Positives = 89/240 (37%), Gaps = 68/240 (28%)

Query: 55  ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQL 111
           ++G+G+YA V       T+  YA+K++ K   +    +     E   F     HP ++ L
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75

Query: 112 -------------LEY----------YED---DENHER-------------HKR-IAHRD 131
                        +EY                 E H R             H+R I +RD
Sbjct: 76  HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 135

Query: 132 LKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           LK +N+L    D    +KL D+ +   G++   +  +   TP          ++APEI+ 
Sbjct: 136 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP---------NYIAPEILR 183

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI 250
                    Y    D W+LGV+++ ++ G  PF      D   Q  E      + LF  I
Sbjct: 184 G------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE------DYLFQVI 231

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  115 bits (290), Expect = 8e-29
 Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 34/174 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            + + HRD+KP N+  +    +  VKL D     G+    S  +  A     + VG+  +
Sbjct: 154 SRRVMHRDIKPANVF-ITATGV--VKLGDL----GLGRFFSSKTTAAH----SLVGTPYY 202

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           M+PE +        +GY+ + D+WSLG ++Y +     PFYG+                 
Sbjct: 203 MSPERI------HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-------------L 243

Query: 371 EILFHSIQQGHYD-FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             L   I+Q  Y   P       S+E + L+   +  D  KR     V      
Sbjct: 244 YSLCKKIEQCDYPPLPSD---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  105 bits (263), Expect = 3e-25
 Identities = 47/224 (20%), Positives = 85/224 (37%), Gaps = 69/224 (30%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIID---KLPGHSRSRVFKEVETFHHCQGHPNI 108
             + +G+G ++ V     +L  +  A+K +     +   +R+   KE++       HPN+
Sbjct: 36  IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNV 94

Query: 109 IQLLEYYEDDEN----------------------------------------------HE 122
           I+    + +D                                                H 
Sbjct: 95  IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
           R  R+ HRD+KP N+  +    +  VKL D     G+    S  +  A     + VG+  
Sbjct: 155 R--RVMHRDIKPANVF-ITATGV--VKLGDL----GLGRFFSSKTTAAH----SLVGTPY 201

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +M+PE +        +GY+ + D+WSLG ++Y +     PFYG+
Sbjct: 202 YMSPERI------HENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  116 bits (292), Expect = 9e-29
 Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 44/184 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L     +GI +RDLK +N+L    D     KL DF +   GI    +  +   TP     
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTP----- 188

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
               +++APEI+          Y    D W++GV++Y +LCG+ PF     E+       
Sbjct: 189 ----DYIAPEILQE------MLYGPAVDWWAMGVLLYEMLCGHAPFE---AEN------- 228

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS------VL 418
                ++ LF +I      +P    + + ++A  +++  + K+   RL + +      +L
Sbjct: 229 -----EDDLFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAIL 279

Query: 419 KHPW 422
           +HP+
Sbjct: 280 RHPF 283

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 88.1 bits (219), Expect = 4e-19
 Identities = 53/215 (24%), Positives = 78/215 (36%), Gaps = 62/215 (28%)

Query: 56  LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQL- 111
           LGKG++  V       T   YAVK++ K        V     E       + HP + QL 
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90

Query: 112 ------------LEYY-----------ED--DENHER-------------HKR-IAHRDL 132
                       +E+                DE   R             H + I +RDL
Sbjct: 91  CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDL 150

Query: 133 KPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           K +N+L    D     KL DF +   GI    +  +   TP         +++APEI+  
Sbjct: 151 KLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTP---------DYIAPEILQE 198

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                   Y    D W++GV++Y +LCG+ PF   
Sbjct: 199 ------MLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  115 bits (291), Expect = 2e-28
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 35/184 (19%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTP 304
           L +  ++GI +RDLK +N+L    D    +KL D+ +   G++   +  +   TP     
Sbjct: 166 LNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP----- 217

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
                ++APEI+          Y    D W+LGV+++ ++ G  PF      D   Q  E
Sbjct: 218 ----NYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE 267

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVL 418
                 + LF  I +     P     ++S +A  +++  L KD ++RL        A + 
Sbjct: 268 ------DYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ 317

Query: 419 KHPW 422
            HP+
Sbjct: 318 GHPF 321

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 90.9 bits (226), Expect = 7e-20
 Identities = 65/280 (23%), Positives = 103/280 (36%), Gaps = 73/280 (26%)

Query: 15  ATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTEL 74
               S  E  +EA N R   K ++SL    F  L      ++G+G+YA V       T+ 
Sbjct: 24  GAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLL-----RVIGRGSYAKVLLVRLKKTDR 78

Query: 75  EYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQL-------------LEY---- 114
            YA++++ K   +    +     E   F     HP ++ L             +EY    
Sbjct: 79  IYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 138

Query: 115 ------YED---DENHER-------------HKR-IAHRDLKPENILCVHPDQLSPVKLC 151
                        E H R             H+R I +RDLK +N+L    D    +KL 
Sbjct: 139 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLT 195

Query: 152 DFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG 210
           D+ +   G++   +  +   TP          ++APEI+          Y    D W+LG
Sbjct: 196 DYGMCKEGLRPGDTTSTFCGTP---------NYIAPEILRG------EDYGFSVDWWALG 240

Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI 250
           V+++ ++ G  PF      D   Q  E      + LF  I
Sbjct: 241 VLMFEMMAGRSPFDIVGSSDNPDQNTE------DYLFQVI 274

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  113 bits (284), Expect = 2e-28
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 45/187 (24%)

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           +       I  HS  + + +RDLKP NI  V   Q   VK+ DF L + +K         
Sbjct: 130 QITKGVDYI--HS--KKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLK--------- 173

Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
                    G+  +M+PE +       +  Y K  DL++LG+++  LL      +     
Sbjct: 174 NDGKRTRSKGTLRYMSPEQI------SSQDYGKEVDLYALGLILAELLHVCDTAFE---- 223

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                            F  ++ G              + K L+++LL K    R + + 
Sbjct: 224 -------------TSKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSE 264

Query: 417 VLKHPWI 423
           +L+   +
Sbjct: 265 ILRTLTV 271

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  102 bits (256), Expect = 2e-24
 Identities = 44/248 (17%), Positives = 80/248 (32%), Gaps = 86/248 (34%)

Query: 37  ATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEV 96
               V   F   ++ + E++G G +  V    + +    Y +K +      +  +  +EV
Sbjct: 1   GAHTVDKRFGMDFK-EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY----NNEKAEREV 55

Query: 97  ETFHHCQGHPNIIQ-----------------------------LLEYYED---------- 117
           +       H NI+                               +E+ +           
Sbjct: 56  KALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 114

Query: 118 -----DEN----------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG 156
                D+                 H   K++ +RDLKP NI  V   Q   VK+ DF L 
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQ---VKIGDFGLV 169

Query: 157 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL 216
           + +K                  G+  +M+PE +       +  Y K  DL++LG+++  L
Sbjct: 170 TSLK---------NDGKRTRSKGTLRYMSPEQI------SSQDYGKEVDLYALGLILAEL 214

Query: 217 LCGYPPFY 224
           L      +
Sbjct: 215 LHVCDTAF 222

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  112 bits (283), Expect = 5e-28
 Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 37/203 (18%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF----DLGSGIKFNTSVHS 294
             A + +  HS  +G+ HRDLKP NI     D    VK+ DF     +    +  T +  
Sbjct: 128 AEAVEFL--HS--KGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTP 180

Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
             A       VG+  +M+PE +        + Y  + D++SLG++++ LL    PF    
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQI------HGNSYSHKVDIFSLGLILFELLY---PFSTQM 231

Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
                          +      ++   +  P   ++        +++ +L     +R  A
Sbjct: 232 E--------------RVRTLTDVRNLKF--PP-LFTQKYPCEYVMVQDMLSPSPMERPEA 274

Query: 415 ASVLKHPWISTAGTAHRPLVTPQ 437
            +++++          + ++  +
Sbjct: 275 INIIENAVFEDLDFPGKTVLRQR 297

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 99.0 bits (247), Expect = 4e-23
 Identities = 48/242 (19%), Positives = 84/242 (34%), Gaps = 74/242 (30%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQ 103
           +   +    + LG+G +  V    N + +  YA+K I       +R +V +EV+     +
Sbjct: 3   YLTDFE-PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61

Query: 104 GHPNIIQ-------------------------LLEY----------------YEDDENHE 122
            HP I++                          ++                  E + +  
Sbjct: 62  -HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120

Query: 123 RH--------------KRIAHRDLKPENILCVHPDQLSPVKLCDF----DLGSGIKFNTS 164
            H              K + HRDLKP NI     D    VK+ DF     +    +  T 
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTV 177

Query: 165 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           +    A       VG+  +M+PE +        + Y  + D++SLG++++ LL    PF 
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQI------HGNSYSHKVDIFSLGLILFELLY---PFS 228

Query: 225 GN 226
             
Sbjct: 229 TQ 230

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  112 bits (281), Expect = 8e-28
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 58/197 (29%)

Query: 248 HSIQQGIAHRDLKPENIL----------------CVHPDQLSPVKLCDFDLGSGIKFNTS 291
           HS    + H D+KP NI                           K+ D    + I     
Sbjct: 132 HS--MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                         G + F+A E++      E   +  + D+++L + V       P   
Sbjct: 190 E------------EGDSRFLANEVLQ-----ENYTHLPKADIFALALTVVCAAGAEPLP- 231

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARK 410
              G+                 +H I+QG     P+     +S E  +L++ ++  D  +
Sbjct: 232 -RNGD----------------QWHEIRQGRLPRIPQV----LSQEFTELLKVMIHPDPER 270

Query: 411 RLSAASVLKHPWISTAG 427
           R SA +++KH  + +A 
Sbjct: 271 RPSAMALVKHSVLLSAS 287

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 98.9 bits (247), Expect = 3e-23
 Identities = 38/249 (15%), Positives = 66/249 (26%), Gaps = 88/249 (35%)

Query: 39  SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEV 96
           S  T+ F      + E +G G + SV  CV  L    YA+K   K            +EV
Sbjct: 7   SRYTTEFH-----ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV 61

Query: 97  ETFHHCQGHPNIIQLLEYYEDDEN------------------------------------ 120
                   H ++++    + +D++                                    
Sbjct: 62  YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL 121

Query: 121 ----------HERHKRIAHRDLKPENIL----------------CVHPDQLSPVKLCDFD 154
                     H     + H D+KP NI                           K+ D  
Sbjct: 122 LQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 179

Query: 155 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 214
             + I                   G + F+A E++      E   +  + D+++L + V 
Sbjct: 180 HVTRISSPQVE------------EGDSRFLANEVLQ-----ENYTHLPKADIFALALTVV 222

Query: 215 ILLCGYPPF 223
                 P  
Sbjct: 223 CAAGAEPLP 231

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  108 bits (273), Expect = 1e-26
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 32/183 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              I HRD+K +N+L ++      +K+ DF    G     S       P   T  G+ ++
Sbjct: 140 DNQIVHRDIKGDNVL-INTYS-GVLKISDF----GT----SKRLAGINPCTETFTGTLQY 189

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPEI++        GY K  D+WSLG  +  +  G PPFY   GE              
Sbjct: 190 MAPEIID----KGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGE--PQA--------- 233

Query: 371 EILFH-SIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
             +F   + + H + PE     +S EAK  I +    D  KR  A  +L   ++  +   
Sbjct: 234 -AMFKVGMFKVHPEIPES----MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKK 288

Query: 430 HRP 432
            + 
Sbjct: 289 KKT 291

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  103 bits (260), Expect = 7e-25
 Identities = 60/272 (22%), Positives = 97/272 (35%), Gaps = 82/272 (30%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQ- 110
              +LGKG Y  V    ++  ++  A+K I +        + +E+    H + H NI+Q 
Sbjct: 26  DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQY 84

Query: 111 ------------LLEY----------------YEDDENHER-------------H-KRIA 128
                        +E                  +D+E                 H  +I 
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRD+K +N+L ++      +K+ DF    G     S       P   T  G+ ++MAPEI
Sbjct: 145 HRDIKGDNVL-INTYS-GVLKISDF----GT----SKRLAGINPCTETFTGTLQYMAPEI 194

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFH 248
           ++        GY K  D+WSLG  +  +  G PPFY   GE                +F 
Sbjct: 195 ID----KGPRGYGKAADIWSLGCTIIEMATGKPPFY-ELGE--PQA----------AMFK 237

Query: 249 SIQQGIAHRDLKPENILCVHPDQLSPVKLCDF 280
                +    + PE      P+ +S  +   F
Sbjct: 238 -----VGMFKVHPE-----IPESMSA-EAKAF 258

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  111 bits (278), Expect = 5e-26
 Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 43/183 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTP 304
           LF    +GI +RDLK +N++    D    +K+ DF +    I    +  +   TP     
Sbjct: 455 LFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKTFCGTP----- 506

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
               +++APEI+          Y K  D W+ GV++Y +L G  PF    GED       
Sbjct: 507 ----DYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFE---GED------- 546

Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLK 419
                ++ LF SI + +  +P     ++S EA  + + L+ K   KRL         + +
Sbjct: 547 -----EDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597

Query: 420 HPW 422
           H +
Sbjct: 598 HAF 600

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 84.3 bits (208), Expect = 3e-17
 Identities = 56/265 (21%), Positives = 88/265 (33%), Gaps = 67/265 (25%)

Query: 6   DSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQ 65
             F  +     +K+  E+     +K         +  + F  L      +LGKG++  V 
Sbjct: 304 QKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFL-----MVLGKGSFGKVM 358

Query: 66  TCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQL----------- 111
                 T+  YAVKI+ K        V     E          P + QL           
Sbjct: 359 LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418

Query: 112 --LEYYED-------------DENHER-------------HKR-IAHRDLKPENILCVHP 142
             +EY                 E H                 + I +RDLK +N++    
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML--- 475

Query: 143 DQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD 201
           D    +K+ DF +    I    +  +   TP         +++APEI+          Y 
Sbjct: 476 DSEGHIKIADFGMCKENIWDGVTTKTFCGTP---------DYIAPEIIAY------QPYG 520

Query: 202 KRCDLWSLGVVVYILLCGYPPFYGN 226
           K  D W+ GV++Y +L G  PF G 
Sbjct: 521 KSVDWWAFGVLLYEMLAGQAPFEGE 545

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  106 bits (267), Expect = 1e-25
 Identities = 36/196 (18%), Positives = 60/196 (30%), Gaps = 36/196 (18%)

Query: 242 CQEILF-----HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSP 295
             + L      H+  + I H D+K +N+L +  D  S   LCDF    G           
Sbjct: 156 LGQALEGLEYLHT--RRILHGDVKADNVL-LSSDG-SRAALCDF----GHALCLQPDGLG 207

Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
            +        G+   MAPE+V           D + D+WS   ++  +L G  P+     
Sbjct: 208 KSLLTGDYIPGTETHMAPEVV------MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ--- 258

Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
                           +    I        E    + +      I+  L K+   R SA 
Sbjct: 259 ----------YFRGP-LCLK-IASEPPPIREIP-PSCAPLTAQAIQEGLRKEPVHRASAM 305

Query: 416 SVLKHPWISTAGTAHR 431
            + +    +       
Sbjct: 306 ELRRKVGKALQEVGGL 321

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 96.7 bits (241), Expect = 4e-22
 Identities = 41/219 (18%), Positives = 66/219 (30%), Gaps = 63/219 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
           +      +G+G++  V    +  T  + AVK +  L         +E+         P I
Sbjct: 59  WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRV----EELVACAGLS-SPRI 112

Query: 109 IQLLEYYEDDEN------------------------------------------HERHKR 126
           + L     +                                             H R  R
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR--R 170

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVGSAEFMA 185
           I H D+K +N+L +  D  S   LCDF    G            +        G+   MA
Sbjct: 171 ILHGDVKADNVL-LSSDG-SRAALCDF----GHALCLQPDGLGKSLLTGDYIPGTETHMA 224

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           PE+V           D + D+WS   ++  +L G  P+ 
Sbjct: 225 PEVV------MGKPCDAKVDIWSSCCMMLHMLNGCHPWT 257

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  106 bits (267), Expect = 1e-25
 Identities = 29/240 (12%), Positives = 62/240 (25%), Gaps = 76/240 (31%)

Query: 47  DLYRLKGEILGKGAYASV-----QTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH 101
            L  +    LG+GA+A V         +   + ++ +K+           +  ++     
Sbjct: 65  KLVYVHHL-LGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP-ANPWEFYIGTQLMERLK 122

Query: 102 CQGHPNIIQLLEYYEDDEN----------------------------------------- 120
                  ++    +                                              
Sbjct: 123 PSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRML 182

Query: 121 ------HERHKRIAHRDLKPENILCVHP--------DQLSPVKLCDFDLGSGIKFNTSVH 166
                 H+    I H D+KP+N +  +         D  + + L D   G  I       
Sbjct: 183 YMIEQVHD--CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDL--GQSIDMKLFPK 238

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             + T        ++ F   E++          ++ + D + +   VY +L G      N
Sbjct: 239 GTIFT----AKCETSGFQCVEML------SNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 96.6 bits (240), Expect = 6e-22
 Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 45/183 (24%)

Query: 248 HSIQQGIAHRDLKPENILCVHP--------DQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H     I H D+KP+N +  +         D  + + L D   G  I         + T 
Sbjct: 189 HD--CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDL--GQSIDMKLFPKGTIFT- 243

Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
                  ++ F   E++          ++ + D + +   VY +L G      N G    
Sbjct: 244 ---AKCETSGFQCVEML------SNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG---- 290

Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                      E     + +              D   +    +L       L +  +L+
Sbjct: 291 ----------GECKPEGLFRRLPH---------LDMWNEFFHVMLNIPDCHHLPSLDLLR 331

Query: 420 HPW 422
              
Sbjct: 332 QKL 334

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  104 bits (262), Expect = 5e-25
 Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 30/180 (16%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVG 306
                 I HRD+KP NIL    D+   +KLCDF  G SG   ++   +           G
Sbjct: 142 KE-NLKIIHRDIKPSNILL---DRSGNIKLCDF--GISGQLVDSIAKT--------RDAG 187

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              +MAPE ++        GYD R D+WSLG+ +Y L  G  P+                
Sbjct: 188 CRPYMAPERIDP--SASRQGYDVRSDVWSLGITLYELATGRFPY-------------PKW 232

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
           ++  + L   ++         E    S    + +   L KD  KR     +LKHP+I   
Sbjct: 233 NSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 64/218 (29%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQ-- 110
             +G+GAY SV   V+  +    AVK I        + ++  +++        P I+Q  
Sbjct: 28  GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87

Query: 111 -----------LLEY--------YED---------DEN----------------HERHKR 126
                       +E         Y+           E                  E  K 
Sbjct: 88  GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK- 146

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           I HRD+KP NIL    D+   +KLCDF  G SG   ++   +           G   +MA
Sbjct: 147 IIHRDIKPSNILL---DRSGNIKLCDF--GISGQLVDSIAKT--------RDAGCRPYMA 193

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE ++        GYD R D+WSLG+ +Y L  G  P+
Sbjct: 194 PERIDP--SASRQGYDVRSDVWSLGITLYELATGRFPY 229

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  103 bits (260), Expect = 6e-25
 Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 40/187 (21%)

Query: 242 CQEILF-----HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           C++IL      H+    I HRDLK +NI    P     VK+ D  L + +K  +   + +
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGL-ATLKRASFAKAVI 191

Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
            TP         EFMAPE+           YD+  D+++ G+ +  +     P+      
Sbjct: 192 GTP---------EFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYPYS----- 230

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                    C    +I +  +  G    P         E K++I   + ++  +R S   
Sbjct: 231 --------ECQNAAQI-YRRVTSGV--KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKD 279

Query: 417 VLKHPWI 423
           +L H + 
Sbjct: 280 LLNHAFF 286

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  102 bits (255), Expect = 3e-24
 Identities = 49/227 (21%), Positives = 79/227 (34%), Gaps = 69/227 (30%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQGHP 106
           +      +G+G++ +V   ++  T +E A   +   KL    R R  +E E     Q HP
Sbjct: 27  FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HP 85

Query: 107 NIIQLLEYYEDDEN---------------------------------------------- 120
           NI++  + +E                                                  
Sbjct: 86  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 145

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H R   I HRDLK +NI    P     VK+ D  L + +K  +   + + TP        
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGS--VKIGDLGL-ATLKRASFAKAVIGTP-------- 194

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
            EFMAPE+           YD+  D+++ G+ +  +     P Y  C
Sbjct: 195 -EFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYP-YSEC 232

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  101 bits (255), Expect = 3e-24
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 33/184 (17%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVG 306
           HS    I HRD+KP N+L    + L  VK+CDF  G SG   +                G
Sbjct: 126 HSKLSVI-HRDVKPSNVLI---NALGQVKMCDF--GISGYLVDDVAKD--------IDAG 171

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
              +MAPE +N        GY  + D+WSLG+ +  L     P+             ++ 
Sbjct: 172 CKPYMAPERINP--ELNQKGYSVKSDIWSLGITMIELAILRFPY-------------DSW 216

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
               + L   +++     P  ++S    E  D   + L K++++R +   +++HP+ +  
Sbjct: 217 GTPFQQLKQVVEEPSPQLPADKFS---AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273

Query: 427 GTAH 430
            +  
Sbjct: 274 ESKG 277

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 97.3 bits (243), Expect = 9e-23
 Identities = 48/217 (22%), Positives = 75/217 (34%), Gaps = 63/217 (29%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQ-- 110
             LG+GAY  V+   ++ +    AVK I        + R+  +++        P  +   
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72

Query: 111 -----------LLEY--------YED--------DEN----------------HERHKRI 127
                       +E         Y+          E+                H +   I
Sbjct: 73  GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
            HRD+KP N+L    + L  VK+CDF  G SG   +                G   +MAP
Sbjct: 133 -HRDVKPSNVLI---NALGQVKMCDF--GISGYLVDDVAKD--------IDAGCKPYMAP 178

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E +N        GY  + D+WSLG+ +  L     P+
Sbjct: 179 ERINP--ELNQKGYSVKSDIWSLGITMIELAILRFPY 213

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  100 bits (250), Expect = 2e-23
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 31/187 (16%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVG 306
              + G+ HRD+KP NIL    D+   +KLCDF  G SG   +                G
Sbjct: 141 KE-KHGVIHRDVKPSNILL---DERGQIKLCDF--GISGRLVDDKAKD--------RSAG 186

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
            A +MAPE ++     +   YD R D+WSLG+ +  L  G  P+             + C
Sbjct: 187 CAAYMAPERIDPPDPTK-PDYDIRADVWSLGISLVELATGQFPY-------------KNC 232

Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
               E+L   +Q+     P       S + +  ++  L KD RKR     +L+H +I   
Sbjct: 233 KTDFEVLTKVLQEEPPLLPGHMGF--SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290

Query: 427 GTAHRPL 433
            T    +
Sbjct: 291 ETLEVDV 297

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 95.1 bits (237), Expect = 1e-21
 Identities = 50/214 (23%), Positives = 73/214 (34%), Gaps = 59/214 (27%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQ-- 110
             +G G    V       T    AVK + +        R+  +++        P I+Q  
Sbjct: 31  GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90

Query: 111 -----------LLEY--------YED-----DEN----------------HERHKRIAHR 130
                       +E          +       E                  E+H  I HR
Sbjct: 91  GTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI-HR 149

Query: 131 DLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
           D+KP NIL    D+   +KLCDF  G SG   +                G A +MAPE +
Sbjct: 150 DVKPSNILL---DERGQIKLCDF--GISGRLVDDKAKD--------RSAGCAAYMAPERI 196

Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           +     +   YD R D+WSLG+ +  L  G  P+
Sbjct: 197 DPPDPTK-PDYDIRADVWSLGISLVELATGQFPY 229

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 95.3 bits (237), Expect = 2e-21
 Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 75/254 (29%)

Query: 21  AERIEEARNKRRRKKTATSLVTS-------CFQDLYRLKGEILGKGAYASVQTCVNILTE 73
            +++EE     +++K   + +T           D  ++    LG G    V    +  + 
Sbjct: 1   GKKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKI--SELGAGNGGVVFKVSHKPSG 58

Query: 74  LEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNIIQ-------------LLEY----- 114
           L  A K+I      + R+++ +E++  H C   P I+               +E+     
Sbjct: 59  LVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGS 117

Query: 115 ----YED----DEN----------------HERHKRIAHRDLKPENILCVHPDQLSPVKL 150
                +      E                  E+HK I HRD+KP NIL     +   +KL
Sbjct: 118 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGE---IKL 173

Query: 151 CDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 209
           CDF  G SG   ++  +         + VG+  +M+PE +        + Y  + D+WS+
Sbjct: 174 CDF--GVSGQLIDSMAN---------SFVGTRSYMSPERLQG------THYSVQSDIWSM 216

Query: 210 GVVVYILLCGYPPF 223
           G+ +  +  G  P 
Sbjct: 217 GLSLVEMAVGRYPI 230

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 91.4 bits (227), Expect = 3e-20
 Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 52/206 (25%)

Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
           I HRD+KP NIL     +   +KLCDF  G SG   ++  +         + VG+  +M+
Sbjct: 153 IMHRDVKPSNILVNSRGE---IKLCDF--GVSGQLIDSMAN---------SFVGTRSYMS 198

Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ-- 370
           PE +        + Y  + D+WS+G+ +  +  G  P      ++     G         
Sbjct: 199 PERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 252

Query: 371 --------------------------EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLL 404
                                     E+L + + +     P G +S    E +D + + L
Sbjct: 253 TPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS---LEFQDFVNKCL 309

Query: 405 VKDARKRLSAASVLKHPWISTAGTAH 430
           +K+  +R     ++ H +I  +    
Sbjct: 310 IKNPAERADLKQLMVHAFIKRSDAEE 335

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 92.9 bits (231), Expect = 9e-21
 Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 53/215 (24%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGI-KFNTSV 292
               L      HS    + HRD+K  NIL      LS    VKL DF   S +   N+ V
Sbjct: 160 THGALQGLAYLHS--HNMIHRDVKAGNIL------LSEPGLVKLGDFGSASIMAPANSFV 211

Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            +P              +MAPE++   +  +   YD + D+WSLG+    L    PP + 
Sbjct: 212 GTPY-------------WMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAERKPPLF- 254

Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
                         +A    L+H  Q        G WS   +  ++ +   L K  + R 
Sbjct: 255 ------------NMNAMS-ALYHIAQNESPALQSGHWS---EYFRNFVDSCLQKIPQDRP 298

Query: 413 SAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARE 447
           ++  +LKH ++         ++   +I+R + A  
Sbjct: 299 TSEVLLKHRFVLRERP-PTVIM--DLIQRTKDAVR 330

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 84.4 bits (209), Expect = 6e-18
 Identities = 59/279 (21%), Positives = 91/279 (32%), Gaps = 82/279 (29%)

Query: 1   MDFYGDSFHHSVPVATSKSNAERIEE---ARNKRRRKKTATSLVTSCFQ----DLYRLKG 53
           M +Y    HH   + T+++   +          R        +    F+     L+    
Sbjct: 1   MSYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLR 60

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNIIQ 110
           EI G G++ +V    ++      A+K +      S      + KEV      + HPN IQ
Sbjct: 61  EI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118

Query: 111 LLEYYEDDEN------------------------------------------HERHKRIA 128
               Y  +                                            H  +  I 
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-I- 176

Query: 129 HRDLKPENILCVHPDQLSP---VKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVGSAEFM 184
           HRD+K  NIL      LS    VKL DF   S +   N+ V +P              +M
Sbjct: 177 HRDVKAGNIL------LSEPGLVKLGDFGSASIMAPANSFVGTPY-------------WM 217

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           APE++   +  +   YD + D+WSLG+    L    PP 
Sbjct: 218 APEVI---LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 92.0 bits (229), Expect = 9e-21
 Identities = 59/226 (26%), Positives = 89/226 (39%), Gaps = 60/226 (26%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-----GSGIKFNTS 291
            +EIL      HS  +   HRD+K  N+L     +   VKL DF +      + IK NT 
Sbjct: 125 LREILKGLDYLHS--EKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTF 179

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
           V +P              +MAPE++      + S YD + D+WSLG+    L  G PP  
Sbjct: 180 VGTPF-------------WMAPEVI------KQSAYDSKADIWSLGITAIELARGEPPHS 220

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFP---EGEWSTISDEAKDLIRRLLVKDA 408
                          H   ++LF   +      P   EG +   S   K+ +   L K+ 
Sbjct: 221 E-------------LHP-MKVLFLIPKNN----PPTLEGNY---SKPLKEFVEACLNKEP 259

Query: 409 RKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARELSSFAES 454
             R +A  +LKH +I         L   ++I R +  +   S  +S
Sbjct: 260 SFRPTAKELLKHKFILRNAKKTSYLT--ELIDRYKRWKAEQSHDDS 303

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 84.3 bits (209), Expect = 3e-18
 Identities = 51/223 (22%), Positives = 81/223 (36%), Gaps = 69/223 (30%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR-SRVFKEVETFHHCQG 104
           ++L+    +I GKG++  V   ++  T+   A+KIID          + +E+     C  
Sbjct: 21  EELFTKLEKI-GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD- 78

Query: 105 HPNIIQLLEYYEDDEN----------------------HERH-----------------K 125
            P + +    Y  D                         E                   +
Sbjct: 79  SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE 138

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDL-----GSGIKFNTSVHSPLATPLLLTPVGS 180
           +  HRD+K  N+L     +   VKL DF +      + IK NT V +P            
Sbjct: 139 KKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF----------- 184

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
             +MAPE++      + S YD + D+WSLG+    L  G PP 
Sbjct: 185 --WMAPEVI------KQSAYDSKADIWSLGITAIELARGEPPH 219

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 90.9 bits (226), Expect = 3e-20
 Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 47/217 (21%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTS 291
           C+EIL      H     + HRD+K +N+L     +   VKL DF + + +     + NT 
Sbjct: 135 CREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTF 189

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
           + +P              +MAPE++     P+ + YD + DLWSLG+    +  G PP  
Sbjct: 190 IGTPY-------------WMAPEVIACDENPD-ATYDFKSDLWSLGITAIEMAEGAPPLC 235

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                          H     LF   +         +W   S + +  I   LVK+  +R
Sbjct: 236 D-------------MHP-MRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQR 278

Query: 412 LSAASVLKHPWISTAGTAHRPLVT-PQVIRRNQSARE 447
            +   ++KHP+I       +  +     I R +  R 
Sbjct: 279 PATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKKRG 315

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 46/231 (19%), Positives = 82/231 (35%), Gaps = 72/231 (31%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
             ++ L   + G G Y  V    ++ T    A+K++D + G     + +E+        H
Sbjct: 23  AGIFELVELV-GNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHH 80

Query: 106 PNIIQ-------------------------------LLEYYEDDENHERH---------- 124
            NI                                 L++  + +   E            
Sbjct: 81  RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140

Query: 125 -------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-----KFNTSVHSPLATP 172
                   ++ HRD+K +N+L     +   VKL DF + + +     + NT + +P    
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPY--- 194

Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                     +MAPE++     P+ + YD + DLWSLG+    +  G PP 
Sbjct: 195 ----------WMAPEVIACDENPD-ATYDFKSDLWSLGITAIEMAEGAPPL 234

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 89.7 bits (223), Expect = 5e-20
 Identities = 46/205 (22%), Positives = 73/205 (35%), Gaps = 57/205 (27%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF----------DLGSGI 286
            +E+L      H    G  HRD+K  NIL     +   V++ DF          D+    
Sbjct: 127 LREVLEGLEYLHK--NGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNK 181

Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
              T V     TP          +MAPE++      +  GYD + D+WS G+    L  G
Sbjct: 182 VRKTFV----GTPC---------WMAPEVME-----QVRGYDFKADIWSFGITAIELATG 223

Query: 347 YPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG-----HYDFPEGEWSTISDEAKDLIR 401
             P++                   ++L  ++Q            +          + +I 
Sbjct: 224 AAPYH-------------KYPP-MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMIS 269

Query: 402 RLLVKDARKRLSAASVLKHPWISTA 426
             L KD  KR +AA +L+H +   A
Sbjct: 270 LCLQKDPEKRPTAAELLRHKFFQKA 294

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 51/238 (21%), Positives = 83/238 (34%), Gaps = 84/238 (35%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR-SRVFKEVETFHHCQG 104
           +D Y L+  I G GA A VQ       + + A+K I+     +    + KE++    C  
Sbjct: 14  RDDYELQEVI-GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH- 71

Query: 105 HPNIIQ-------------------------LLEYYEDDENHE----------------- 122
           HPNI+                          ++++      H+                 
Sbjct: 72  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131

Query: 123 -------RHKRIAHRDLKPENILCVHPDQLSPVKLCDF----------DLGSGIKFNTSV 165
                  ++ +I HRD+K  NIL     +   V++ DF          D+       T V
Sbjct: 132 EGLEYLHKNGQI-HRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187

Query: 166 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                TP          +MAPE++      +  GYD + D+WS G+    L  G  P+
Sbjct: 188 ----GTPC---------WMAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPY 227

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 88.9 bits (221), Expect = 7e-20
 Identities = 44/223 (19%), Positives = 79/223 (35%), Gaps = 66/223 (29%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVF-------KEVETFHHCQGH 105
            + +GKG +  V     +  +   A+K +        + +        +EV    +   H
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-H 82

Query: 106 PNIIQLL-----------EYYE--------DDEN----------------------HERH 124
           PNI++L            E+           D+                         ++
Sbjct: 83  PNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142

Query: 125 KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             I HRDL+  NI     D+ +P   K+ DF L S    ++              +G+ +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-SQQSVHSVSGL----------LGNFQ 191

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +MAPE     +G E   Y ++ D +S  +++Y +L G  PF  
Sbjct: 192 WMAPET----IGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 77.4 bits (191), Expect = 6e-16
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 17/107 (15%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
            +    I HRDL+  NI     D+ +P   K+ DF L S    ++              +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-SQQSVHSVSGL----------L 187

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           G+ ++MAPE     +G E   Y ++ D +S  +++Y +L G  PF  
Sbjct: 188 GNFQWMAPET----IGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 88.4 bits (219), Expect = 4e-19
 Identities = 38/272 (13%), Positives = 77/272 (28%), Gaps = 54/272 (19%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLG-SGIKFNTSV 292
            Q +L      H    G  HR +K  +IL      +S    V L       +    +   
Sbjct: 134 LQGVLKALDYIHH--MGYVHRSVKASHIL------ISVDGKVYLSGL--RSNLSMISHGQ 183

Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY- 351
              +        V    +++PE++         GYD + D++S+G+    L  G+ PF  
Sbjct: 184 RQRVVHDFPKYSVKVLPWLSPEVLQQ----NLQGYDAKSDIYSVGITACELANGHVPFKD 239

Query: 352 --------------------GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWST 391
                                +           +       L  S+         G+  +
Sbjct: 240 MPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPS 299

Query: 392 I------SDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSA 445
                  S      + + L ++   R SA+++L H +           +   ++R     
Sbjct: 300 HPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPE-LLRPVTPI 358

Query: 446 RELSSFAESAMSANRVILQHFSICKNPKDEQW 477
                      S    ++ +       + + W
Sbjct: 359 TNFEGSQSQDHSGIFGLVTNLE---ELEVDDW 387

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 78.8 bits (194), Expect = 6e-16
 Identities = 39/229 (17%), Positives = 67/229 (29%), Gaps = 66/229 (28%)

Query: 47  DLYRLKGEILGKGA--YASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHC 102
             Y L   I GKG     +V       T     V+ I+         + +  E+      
Sbjct: 25  GCYELLTVI-GKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 103 QGHPNIIQ-------------------------LLEYYEDDENHE--------------- 122
             HPNI+                          L+  +  D  +E               
Sbjct: 84  N-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 142

Query: 123 ---RHKRIAHRDLKPENILCVHPDQLSP---VKLCDFDLG-SGIKFNTSVHSPLATPLLL 175
                  + HR +K  +IL      +S    V L       +    +      +      
Sbjct: 143 YIHHMGYV-HRSVKASHIL------ISVDGKVYLSGL--RSNLSMISHGQRQRVVHDFPK 193

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
             V    +++PE++         GYD + D++S+G+    L  G+ PF 
Sbjct: 194 YSVKVLPWLSPEVLQQ----NLQGYDAKSDIYSVGITACELANGHVPFK 238

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 86.6 bits (215), Expect = 6e-19
 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 46/214 (21%)

Query: 242 CQEILF-----HSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVH 293
           C+++L      HS  + I HRDLK  N+L      ++    ++L DF + +         
Sbjct: 123 CRQMLEALNFLHS--KRIIHRDLKAGNVL------MTLEGDIRLADFGVSAKNLKTLQKR 174

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                    + +G+  +MAPE+V      + + YD + D+WSLG+ +  +    PP +  
Sbjct: 175 D--------SFIGTPYWMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHH-- 223

Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDARKRL 412
                        +    +L    +           W   S E +D ++  L K+   R 
Sbjct: 224 -----------ELNP-MRVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRP 268

Query: 413 SAASVLKHPWISTAGTAHRPLVTPQVIRRNQSAR 446
           SAA +L+HP++S+  + ++ L   +++   ++  
Sbjct: 269 SAAQLLEHPFVSSITS-NKALR--ELVAEAKAEV 299

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 86.2 bits (214), Expect = 8e-19
 Identities = 51/221 (23%), Positives = 82/221 (37%), Gaps = 61/221 (27%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
            +++ + GE+ G GA+  V    N  T    A K+I+            E+E    C  H
Sbjct: 18  NEVWEIVGEL-GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-H 75

Query: 106 PNIIQLLE-YYEDDE----------------------------------------NHERH 124
           P I++LL  YY D +                                        N    
Sbjct: 76  PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135

Query: 125 KRIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
           KRI HRDLK  N+L      ++    ++L DF + +                  + +G+ 
Sbjct: 136 KRIIHRDLKAGNVL------MTLEGDIRLADFGVSAKNLKTLQKRD--------SFIGTP 181

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
            +MAPE+V      + + YD + D+WSLG+ +  +    PP
Sbjct: 182 YWMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPP 221

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 86.7 bits (215), Expect = 1e-18
 Identities = 45/224 (20%), Positives = 72/224 (32%), Gaps = 63/224 (28%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
              + +  I H DLKPENIL  +P + S +K+ DF  GS  +    ++           +
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKR-SAIKIVDF--GSSCQLGQRIY---------QYI 219

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG------------- 352
            S  + +PE++   +G     YD   D+WSLG ++  +  G P F G             
Sbjct: 220 QSRFYRSPEVL---LG---MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV 273

Query: 353 -------------------NCGEDCGWQ-------RGETCHACQEILFHSIQQGHYDFPE 386
                                  D  W        + E        L + +         
Sbjct: 274 LGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGG 333

Query: 387 GEWSTISDEAK------DLIRRLLVKDARKRLSAASVLKHPWIS 424
                            DLI R+L  D + R+     L+H +  
Sbjct: 334 RRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 46/222 (20%), Positives = 76/222 (34%), Gaps = 67/222 (30%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKII--------------------DKLPGHSRSRVF 93
            ++GKG++  V    + + +   A+KII                    +K     +  + 
Sbjct: 60  SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119

Query: 94  KEVETFHHCQGH---------PNIIQLLEYYED-------------------DENHERHK 125
                F   + H          N+  LL                                
Sbjct: 120 HLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 178

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I H DLKPENIL  +P + S +K+ DF  GS  +    ++           + S  + +
Sbjct: 179 SIIHCDLKPENILLCNPKR-SAIKIVDF--GSSCQLGQRIY---------QYIQSRFYRS 226

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
           PE++   +G     YD   D+WSLG ++  +  G P F G  
Sbjct: 227 PEVL---LG---MPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 58/217 (26%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           +  Y    +I G+GA  +V T +++ T  E A++ ++      +  +  E+      + +
Sbjct: 19  KKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-N 76

Query: 106 PNIIQLLE-YYEDDE--------------------------------------NHERHKR 126
           PNI+  L+ Y   DE                                            +
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRD+K +NIL         VKL DF   + I    S  S        T VG+  +MAP
Sbjct: 137 VIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAP 185

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           E+V          Y  + D+WSLG++   ++ G PP+
Sbjct: 186 EVV------TRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 83.1 bits (206), Expect = 8e-18
 Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 45/212 (21%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           C+E L      HS    + HRD+K +NIL         VKL DF   + I    S  S  
Sbjct: 122 CRECLQALEFLHS--NQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRS-- 174

Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
                 T VG+  +MAPE+V          Y  + D+WSLG++   ++ G PP+      
Sbjct: 175 ------TMVGTPYWMAPEVV------TRKAYGPKVDIWSLGIMAIEMIEGEPPYL----- 217

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAA 415
                     +  +  L+     G    PE      +S   +D + R L  D  KR SA 
Sbjct: 218 --------NENPLR-ALYLIATNGT---PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAK 265

Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQSARE 447
            +L+H ++  A      L    +I   + A +
Sbjct: 266 ELLQHQFLKIAKP-LSSLT--PLIAAAKEATK 294

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 84.3 bits (209), Expect = 4e-18
 Identities = 52/258 (20%), Positives = 92/258 (35%), Gaps = 62/258 (24%)

Query: 9   HHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQ----DLYRLKGEILGKGAYASV 64
           HH    +      E +         ++   +L     Q     L     +I G+G+   V
Sbjct: 3   HHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKI-GEGSTGIV 61

Query: 65  QTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE-YYEDDE---- 119
                  +  + AVK++D      R  +F EV      Q H N++++ + Y   +E    
Sbjct: 62  CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVL 120

Query: 120 ----------------------------------NHERHKRIAHRDLKPENILCVHPDQL 145
                                              +   + + HRD+K ++IL     + 
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR- 179

Query: 146 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD 205
             VKL DF   + I  +             + VG+  +MAPE+++       S Y    D
Sbjct: 180 --VKLSDFGFCAQISKDVPKRK--------SLVGTPYWMAPEVISR------SLYATEVD 223

Query: 206 LWSLGVVVYILLCGYPPF 223
           +WSLG++V  ++ G PP+
Sbjct: 224 IWSLGIMVIEMVDGEPPY 241

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 40/192 (20%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           C+ +L      H+  QG+ HRD+K ++IL     +   VKL DF   + I  +       
Sbjct: 147 CEAVLQALAYLHA--QGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRK-- 199

Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
                 + VG+  +MAPE+++       S Y    D+WSLG++V  ++ G PP++     
Sbjct: 200 ------SLVGTPYWMAPEVISR------SLYATEVDIWSLGIMVIEMVDGEPPYF----- 242

Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                   +    Q  +                  +S   +D + R+LV+D ++R +A  
Sbjct: 243 --------SDSPVQ-AMKRLRDSPPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQE 291

Query: 417 VLKHPWISTAGT 428
           +L HP++   G 
Sbjct: 292 LLDHPFLLQTGL 303

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 49/226 (21%), Positives = 82/226 (36%), Gaps = 79/226 (34%)

Query: 53  GEILGKGAYASV------QTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQG 104
            E +G G++ +V       + V        AVKI+          +   +EV      + 
Sbjct: 42  KEKIGAGSFGTVHRAEWHGSDV--------AVKILMEQDFHAERVNEFLREVAIMKRLR- 92

Query: 105 HPNIIQLL-------------EYYE---------DDEN---------------------- 120
           HPNI+  +             EY                                     
Sbjct: 93  HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152

Query: 121 -HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
            H R+  I HR+LK  N+L    D+   VK+CDF L S +K +T + S        +  G
Sbjct: 153 LHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGL-SRLKASTFLSS-------KSAAG 201

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           + E+MAPE++           +++ D++S GV+++ L     P+  
Sbjct: 202 TPEWMAPEVLR------DEPSNEKSDVYSFGVILWELATLQQPWGN 241

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 74.7 bits (184), Expect = 6e-15
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 17/105 (16%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+    I HR+LK  N+L    D+   VK+CDF L S +K +T + S        +  G+
Sbjct: 154 HNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGL-SRLKASTFLSS-------KSAAGT 202

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            E+MAPE++           +++ D++S GV+++ L     P+  
Sbjct: 203 PEWMAPEVLR------DEPSNEKSDVYSFGVILWELATLQQPWGN 241

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 54/217 (24%)

Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-----GSGIKFNTS 291
            Q  L      H       HRD+K  NIL          KL DF +      +  K NT 
Sbjct: 131 LQSTLKGLEYLHF--MRKIHRDIKAGNILLNTEGH---AKLADFGVAGQLTDTMAKRNTV 185

Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
           + +P              +MAPE++      +  GY+   D+WSLG+    +  G PP+ 
Sbjct: 186 IGTPF-------------WMAPEVI------QEIGYNCVADIWSLGITAIEMAEGKPPYA 226

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDARK 410
                          H  +  +F         F + E W   SD   D +++ LVK   +
Sbjct: 227 DI-------------HPMR-AIFMIPTNPPPTFRKPELW---SDNFTDFVKQCLVKSPEQ 269

Query: 411 RLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARE 447
           R +A  +L+HP++ +A      ++   +        +
Sbjct: 270 RATATQLLQHPFVRSAKG--VSILRDLINEAMDVKLK 304

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 45/249 (18%), Positives = 86/249 (34%), Gaps = 76/249 (30%)

Query: 25  EEARNKRRRKKTATSLVTSCFQ----DLYRLKGEILGKGAYASVQTCVNILTELEYAVKI 80
           E  + +   ++    L          +++ +  ++ G+G+Y SV   ++  T    A+K 
Sbjct: 3   ETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKL-GEGSYGSVYKAIHKETGQIVAIKQ 61

Query: 81  IDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE-YYEDDE-------------------- 119
           +          + KE+     C   P++++    Y+++ +                    
Sbjct: 62  VP--VESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR 118

Query: 120 --------------------NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL---- 155
                                +    R  HRD+K  NIL          KL DF +    
Sbjct: 119 NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH---AKLADFGVAGQL 175

Query: 156 -GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 214
             +  K NT + +P              +MAPE++      +  GY+   D+WSLG+   
Sbjct: 176 TDTMAKRNTVIGTPF-------------WMAPEVI------QEIGYNCVADIWSLGITAI 216

Query: 215 ILLCGYPPF 223
            +  G PP+
Sbjct: 217 EMAEGKPPY 225

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 10/179 (5%)

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           EI     +  IAHRDLK +NIL V  +      + D  L +    + +    +      T
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNIL-VKKNGT--CCIADLGL-AVKFISDTNEVDIPP---NT 205

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            VG+  +M PE+++  +           D++S G++++ +                +   
Sbjct: 206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265

Query: 364 ETCHACQEILFHSIQQGHY--DFPEGEWSTISDEA-KDLIRRLLVKDARKRLSAASVLK 419
                  E +   +        FP    S         L+      +   RL+A  V K
Sbjct: 266 VPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 42/268 (15%), Positives = 82/268 (30%), Gaps = 80/268 (29%)

Query: 53  GEILGKGAYASV------QTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-GH 105
            + +GKG Y  V         V        AVK+         +  F+E E +      H
Sbjct: 42  VKQIGKGRYGEVWMGKWRGEKV--------AVKV---FFTTEEASWFRETEIYQTVLMRH 90

Query: 106 PNIIQLL-----------------EYYE-------------------------------- 116
            NI+  +                 +Y+E                                
Sbjct: 91  ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL 150

Query: 117 -DDENHERHKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
             +    + K  IAHRDLK +NIL V  +      + D  L +    + +    +     
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNIL-VKKNGT--CCIADLGL-AVKFISDTNEVDIPP--- 203

Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
            T VG+  +M PE+++  +           D++S G++++ +                + 
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263

Query: 235 RGETCHACQEILFHSIQQGIAHRDLKPE 262
                       +  +++ +  + L+P 
Sbjct: 264 DLVPSDPS----YEDMREIVCIKKLRPS 287

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 80.1 bits (198), Expect = 2e-16
 Identities = 44/207 (21%), Positives = 76/207 (36%), Gaps = 55/207 (26%)

Query: 253 GIAHRDLKPENILCVHPDQ---LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
           GI H D+KPEN+L    D    L  +K+ D   G+   +    ++          + + E
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADL--GNAC-WYDEHYTNS--------IQTRE 200

Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH-A 368
           + +PE+    +G   + +    D+WS   +++ L+ G   F     ++      +  H A
Sbjct: 201 YRSPEV---LLG---APWGCGADIWSTACLIFELITGDFLF---EPDEGHSYTKDDDHIA 251

Query: 369 C---------QEILFHSIQQGHYDFPEGEWSTIS-------------------DEAK--- 397
                       +L +      +    G    IS                   DEAK   
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311

Query: 398 DLIRRLLVKDARKRLSAASVLKHPWIS 424
           D +  +L  D RKR  A  ++ HPW+ 
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLK 338

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 70.1 bits (172), Expect = 3e-13
 Identities = 38/236 (16%), Positives = 75/236 (31%), Gaps = 77/236 (32%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHC----------Q 103
             LG G +++V    +++     A+KI+             E++                
Sbjct: 25  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSM 83

Query: 104 GHPNIIQLL---EYYEDDENH--------------------------------------- 121
           G  +I++LL    +   +  H                                       
Sbjct: 84  GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 143

Query: 122 ----ERHKRIAHRDLKPENILCVHPDQ---LSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
                R   I H D+KPEN+L    D    L  +K+ D   G+   +    ++       
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL--GNAC-WYDEHYTNS----- 195

Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
              + + E+ +PE+    +G   + +    D+WS   +++ L+ G   F  + G  
Sbjct: 196 ---IQTREYRSPEV---LLG---APWGCGADIWSTACLIFELITGDFLFEPDEGHS 242

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 52/217 (23%), Positives = 80/217 (36%), Gaps = 68/217 (31%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
            E++G+GA+  V  C       + A+K I       R     E+        HPNI++L 
Sbjct: 13  EEVVGRGAFGVV--CKAKWRAKDVAIKQI--ESESERKAFIVELRQLSRVN-HPNIVKLY 67

Query: 113 -----------EYYE---------DDEN-----------------------HERH-KRIA 128
                      EY E           E                        H    K + 
Sbjct: 68  GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRDLKP N+L V     + +K+CDF   +                +    GSA +MAPE+
Sbjct: 128 HRDLKPPNLLLV--AGGTVLKICDFGT-ACDIQTH----------MTNNKGSAAWMAPEV 174

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
              F G   S Y ++CD++S G++++ ++    PF  
Sbjct: 175 ---FEG---SNYSEKCDVFSWGIILWEVITRRKPFDE 205

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 20/106 (18%)

Query: 248 HSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           HS+Q + + HRDLKP N+L V     + +K+CDF   +                +    G
Sbjct: 119 HSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGT-ACDIQTH----------MTNNKG 165

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           SA +MAPE+   F G   S Y ++CD++S G++++ ++    PF  
Sbjct: 166 SAAWMAPEV---FEG---SNYSEKCDVFSWGIILWEVITRRKPFDE 205

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 78.6 bits (194), Expect = 3e-16
 Identities = 45/229 (19%), Positives = 75/229 (32%), Gaps = 76/229 (33%)

Query: 53  GEILGKGAYASV------QTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-GH 105
            E +GKG Y  V         V        AVKI            F+E E ++     H
Sbjct: 13  LECVGKGRYGEVWRGSWQGENV--------AVKI---FSSRDEKSWFRETELYNTVMLRH 61

Query: 106 PNIIQLL-----------------EYYE-------------------------------- 116
            NI+  +                  Y+E                                
Sbjct: 62  ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121

Query: 117 -DDENHERHKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
             +    + K  IAHRDLK +NIL V  +      + D  L + +   ++    +     
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNIL-VKKNGQ--CCIADLGL-AVMHSQSTNQLDVGNN-- 175

Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
              VG+  +MAPE+++  +  +     KR D+W+ G+V++ +       
Sbjct: 176 -PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 78.6 bits (194), Expect = 3e-16
 Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 10/179 (5%)

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           EI     +  IAHRDLK +NIL V  +      + D  L + +   ++    +       
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNIL-VKKNGQ--CCIADLGL-AVMHSQSTNQLDVGNN---P 176

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            VG+  +MAPE+++  +  +     KR D+W+ G+V++ +                +   
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236

Query: 364 ETCHACQEILFHSIQQGHY--DFPEGEWSTISDEA-KDLIRRLLVKDARKRLSAASVLK 419
                  E +   +       + P   +S  +  +   L++    ++   RL+A  + K
Sbjct: 237 VPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 54/230 (23%), Positives = 78/230 (33%), Gaps = 82/230 (35%)

Query: 53  GEILGKGAYASV------QTCVNILTELEYAVKIIDKLPGHSRSRVF----KEVETFHHC 102
            EI+G G +  V         V        AVK     P    S+      +E + F   
Sbjct: 12  EEIIGIGGFGKVYRAFWIGDEV--------AVKAARHDPDEDISQTIENVRQEAKLFAML 63

Query: 103 QGHPNIIQLL-------------EY--------YEDDEN--------------------H 121
           + HPNII L              E+            +                     H
Sbjct: 64  K-HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH 122

Query: 122 ERH-KRIAHRDLKPENIL-----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
           +     I HRDLK  NIL              +K+ DF L +     T+          +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL-AREWHRTTK---------M 172

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +  G+  +MAPE++ A      S + K  D+WS GV+++ LL G  PF G
Sbjct: 173 SAAGAYAWMAPEVIRA------SMFSKGSDVWSYGVLLWELLTGEVPFRG 216

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 21/104 (20%)

Query: 254 IAHRDLKPENIL-----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 308
           I HRDLK  NIL              +K+ DF L +     T+          ++  G+ 
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGL-AREWHRTTK---------MSAAGAY 178

Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            +MAPE++ A      S + K  D+WS GV+++ LL G  PF G
Sbjct: 179 AWMAPEVIRA------SMFSKGSDVWSYGVLLWELLTGEVPFRG 216

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 78.6 bits (194), Expect = 4e-16
 Identities = 42/228 (18%), Positives = 70/228 (30%), Gaps = 73/228 (32%)

Query: 53  GEILGKGAYASVQTCVNILTELEY--------AVKIIDK-LPGHSRSRVFK-EVETFHHC 102
           GE++GKG +  V           Y        A+++ID       + + FK EV  +   
Sbjct: 38  GELIGKGRFGQV-----------YHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86

Query: 103 QGHPNIIQLLEYYEDDEN-----------------HERH--------------------- 124
           + H N++  +       +                  +                       
Sbjct: 87  R-HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGY 145

Query: 125 ---KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
              K I H+DLK +N+   +      V + DF L   I              L    G  
Sbjct: 146 LHAKGILHKDLKSKNVFYDNGK----VVITDFGL-FSISGVLQAGR--REDKLRIQNGWL 198

Query: 182 EFMAPEIVN---AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             +APEI+         +   + K  D+++LG + Y L     PF   
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 12/109 (11%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+  +GI H+DLK +N+   +      V + DF L   I              L    G 
Sbjct: 147 HA--KGILHKDLKSKNVFYDNGK----VVITDFGL-FSISGVLQAGR--REDKLRIQNGW 197

Query: 308 AEFMAPEIVN---AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
              +APEI+         +   + K  D+++LG + Y L     PF   
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 46/262 (17%), Positives = 85/262 (32%), Gaps = 68/262 (25%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-GHPNIIQL 111
            E +GKG +  V          E AVKI            F+E E +      H NI+  
Sbjct: 47  QESIGKGRFGEV--WRGKWRGEEVAVKI---FSSREERSWFREAEIYQTVMLRHENILGF 101

Query: 112 L-----------------EYYE---------------------------------DDENH 121
           +                 +Y+E                                  +   
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 161

Query: 122 ERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
            + K  IAHRDLK +NIL V  +      + D  L +    + +    +A       VG+
Sbjct: 162 TQGKPAIAHRDLKSKNIL-VKKNGT--CCIADLGL-AVRHDSATDTIDIAPN---HRVGT 214

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 240
             +MAPE+++  +  +     KR D++++G+V + +         +      +       
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274

Query: 241 ACQEILFHSIQQGIAHRDLKPE 262
                    +++ +  + L+P 
Sbjct: 275 PS----VEEMRKVVCEQKLRPN 292

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 76.4 bits (188), Expect = 2e-15
 Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 10/180 (5%)

Query: 243 QEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 302
            EI+    +  IAHRDLK +NIL V  +      + D  L +    + +    +A     
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNIL-VKKNGT--CCIADLGL-AVRHDSATDTIDIAPN--- 209

Query: 303 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 362
             VG+  +MAPE+++  +  +     KR D++++G+V + +         +      +  
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269

Query: 363 GETCHACQEILFHSIQQGHY--DFPEGEWSTISDEA-KDLIRRLLVKDARKRLSAASVLK 419
                   E +   + +     + P    S  +      ++R     +   RL+A  + K
Sbjct: 270 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 78.7 bits (194), Expect = 2e-15
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 27/104 (25%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT--PVGSA 308
             G+ + DLKPENI+ +  +Q   +KL D     G            + +       G+ 
Sbjct: 200 SIGLVYNDLKPENIM-LTEEQ---LKLIDL----GA----------VSRINSFGYLYGTP 241

Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
            F APEIV        +G     D++++G  +  L    P   G
Sbjct: 242 GFQAPEIV-------RTGPTVATDIYTVGRTLAALTLDLPTRNG 278

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 75.7 bits (186), Expect = 1e-14
 Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 29/107 (27%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT--PV 178
           H     + + DLKPENI+ +  +Q   +KL D     G            + +       
Sbjct: 199 HSIG--LVYNDLKPENIM-LTEEQ---LKLIDL----GA----------VSRINSFGYLY 238

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           G+  F APEIV        +G     D++++G  +  L    P   G
Sbjct: 239 GTPGFQAPEIV-------RTGPTVATDIYTVGRTLAALTLDLPTRNG 278

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 77.1 bits (190), Expect = 3e-15
 Identities = 49/232 (21%), Positives = 78/232 (33%), Gaps = 61/232 (26%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           +  I H DLKPENIL     + S +K+ DF  GS    +  V+         T + S  +
Sbjct: 218 KNRIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TYIQSRFY 265

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL---------------------LCGYPP 349
            APE++   +G   + Y    D+WSLG ++  L                     L G P 
Sbjct: 266 RAPEVI---LG---ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319

Query: 350 ------------FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAK 397
                       F  + G    +    T      +L     +        E     +  K
Sbjct: 320 QKLLDASKRAKNFVSSKGYPR-YCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALK 378

Query: 398 --------DLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRR 441
                   D +++ L  D   R++    L+HPW+        P      ++R
Sbjct: 379 GCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL-RRRLPKPPTGEKTSVKR 429

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 76.7 bits (189), Expect = 3e-15
 Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 65/223 (29%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKII--------------------DKLPGHSRSRVF 93
           +++GKG++  V    +       A+K++                     K    +   V 
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162

Query: 94  KEVETFHHCQGHPNI------IQLLEYYEDDEN--------------------HERHKRI 127
             +E F   + H  +      + L E  + ++                          RI
Sbjct: 163 HMLENFTF-RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            H DLKPENIL     + S +K+ DF  GS    +  V+         T + S  + APE
Sbjct: 222 IHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TYIQSRFYRAPE 269

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           ++   +G   + Y    D+WSLG ++  LL GYP   G    D
Sbjct: 270 VI---LG---ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 47/223 (21%), Positives = 76/223 (34%), Gaps = 74/223 (33%)

Query: 53  GEILGKGAYASVQTCVNILTELEY--------AVKII--DKLPGHSRSRVFKEVETFHHC 102
           G+ +G G++ +V           Y        AVK++               EV      
Sbjct: 29  GQRIGSGSFGTV-----------YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77

Query: 103 QGHPNIIQLL------------EY------YEDDENHERH-------------------- 124
           + H NI+  +            ++      Y      E                      
Sbjct: 78  R-HVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136

Query: 125 --KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             K I HRDLK  NI  +H D    VK+ DF L +  K   S              GS  
Sbjct: 137 HAKSIIHRDLKSNNIF-LHEDNT--VKIGDFGL-ATEKSRWSGSHQFEQL-----SGSIL 187

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +MAPE++      +++ Y  + D+++ G+V+Y L+ G  P+  
Sbjct: 188 WMAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 74.6 bits (184), Expect = 5e-15
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 12/102 (11%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            + I HRDLK  NI  +H D    VK+ DF L +  K   S              GS  +
Sbjct: 138 AKSIIHRDLKSNNIF-LHEDNT--VKIGDFGL-ATEKSRWSGSHQFE-----QLSGSILW 188

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           MAPE++      +++ Y  + D+++ G+V+Y L+ G  P+  
Sbjct: 189 MAPEVIR---MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 20/105 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP--VGSA 308
             G  HRD+KPENIL    D      L DF    GI       +     L      VG+ 
Sbjct: 152 AAGATHRDVKPENILVSADDF---AYLVDF----GI-----ASATTDEKLTQLGNTVGTL 199

Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
            +MAPE    F    A     R D+++L  V+Y  L G PP+ G+
Sbjct: 200 YYMAPE---RFSESHA---TYRADIYALTCVLYECLTGSPPYQGD 238

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 22/108 (20%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP--V 178
           H       HRD+KPENIL    D      L DF    GI       +     L      V
Sbjct: 151 HAAG--ATHRDVKPENILVSADDF---AYLVDF----GI-----ASATTDEKLTQLGNTV 196

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           G+  +MAPE    F    A     R D+++L  V+Y  L G PP+ G+
Sbjct: 197 GTLYYMAPE---RFSESHA---TYRADIYALTCVLYECLTGSPPYQGD 238

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 75.8 bits (187), Expect = 4e-15
 Identities = 46/241 (19%), Positives = 84/241 (34%), Gaps = 76/241 (31%)

Query: 251 QQGIAHRDLKPENILCVHPDQL----------------SPVKLCDFDLGSGIKFNTSVHS 294
           +  + H DLKPENIL V+ +                  + +++ DF  GS   F+   H+
Sbjct: 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF--GSAT-FDHEHHT 197

Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
            +        V +  +  PE++   +     G+ + CD+WS+G +++    G+  F  + 
Sbjct: 198 TI--------VATRHYRPPEVI---LE---LGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243

Query: 355 GEDCGWQRGETCH-ACQEILF-----HSIQQGHY---------DFPEGEWSTIS------ 393
             +         H    E +      H I +             + E             
Sbjct: 244 NRE---------HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 294

Query: 394 -------------DEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIR 440
                         +  DL+RR+L  D  +R++ A  L HP+ +      R   T +   
Sbjct: 295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNPS 354

Query: 441 R 441
           R
Sbjct: 355 R 355

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 62.3 bits (152), Expect = 1e-10
 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 33/121 (27%)

Query: 123 RHKRIAHRDLKPENILCVHPDQL----------------SPVKLCDFDLGSGIKFNTSVH 166
              ++ H DLKPENIL V+ +                  + +++ DF  GS   F+   H
Sbjct: 140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF--GSAT-FDHEHH 196

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           + +        V +  +  PE++   +     G+ + CD+WS+G +++    G+  F  +
Sbjct: 197 TTI--------VATRHYRPPEVI---LE---LGWAQPCDVWSIGCILFEYYRGFTLFQTH 242

Query: 227 C 227
            
Sbjct: 243 E 243

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 75.0 bits (185), Expect = 7e-15
 Identities = 50/224 (22%), Positives = 81/224 (36%), Gaps = 76/224 (33%)

Query: 251 QQGIAHRDLKPENILCVHPDQL----------------SPVKLCDFDLGSGIKFNTSVHS 294
              + H DLKPENIL V  D                    +K+ DF  GS   ++   HS
Sbjct: 136 SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHS 192

Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
                   T V +  + APE++   +     G+ + CD+WS+G ++     G+  F  + 
Sbjct: 193 --------TLVSTRHYRAPEVI---LA---LGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238

Query: 355 GEDCGWQRGETCH-ACQEILF-----HSIQQGH---------YDFPEGEWSTIS------ 393
            ++         H A  E +      H IQ+            D+ E   +         
Sbjct: 239 SKE---------HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK 289

Query: 394 -------------DEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
                        +   DLI+++L  D  KR++    LKHP+  
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 63.1 bits (154), Expect = 5e-11
 Identities = 52/243 (21%), Positives = 83/243 (34%), Gaps = 97/243 (39%)

Query: 54  EILGKGAYASVQTCVNILTELEY-AVKII-----------------------DKLPGHSR 89
           + LG+GA+  V  C++      + AVKI+                       D    +S 
Sbjct: 20  DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDP---NST 76

Query: 90  SRVFKEVETFHHCQGH---------PNIIQLLEYYEDDENHER----------------- 123
            R  + +E F H  GH          +    ++     EN                    
Sbjct: 77  FRCVQMLEWFEH-HGHICIVFELLGLSTYDFIK-----ENGFLPFRLDHIRKMAYQICKS 130

Query: 124 ----HK-RIAHRDLKPENILCVHPDQL----------------SPVKLCDFDLGSGIKFN 162
               H  ++ H DLKPENIL V  D                    +K+ DF  GS   ++
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YD 187

Query: 163 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
              HS        T V +  + APE++   +     G+ + CD+WS+G ++     G+  
Sbjct: 188 DEHHS--------TLVSTRHYRAPEVI---LA---LGWSQPCDVWSIGCILIEYYLGFTV 233

Query: 223 FYG 225
           F  
Sbjct: 234 FPT 236

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.8 bits (182), Expect = 7e-15
 Identities = 31/227 (13%), Positives = 60/227 (26%), Gaps = 82/227 (36%)

Query: 53  GEILGKGAYASV------QTCVNILTELEYAVKIIDKLPGHSR-SRVF-KEVETFHHCQG 104
              L +     +         +         VK++      +R SR F +E         
Sbjct: 15  LTKLNENHSGELWKGRWQGNDI--------VVKVLKVRDWSTRKSRDFNEECPRLRIFS- 65

Query: 105 HPNIIQLL---------------EYYE---------DDEN-------------------- 120
           HPN++ +L                +           +  N                    
Sbjct: 66  HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125

Query: 121 --HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
             H     I    L   +++    D+    ++   D+        S  SP         +
Sbjct: 126 FLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVK------FSFQSP-------GRM 169

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            +  ++APE              +  D+WS  V+++ L+    PF  
Sbjct: 170 YAPAWVAPEA---LQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 19/105 (18%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+++  I    L   +++    D+    ++   D+        S  SP         + +
Sbjct: 128 HTLEPLIPRHALNSRSVMI---DEDMTARISMADVK------FSFQSP-------GRMYA 171

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
             ++APE              +  D+WS  V+++ L+    PF  
Sbjct: 172 PAWVAPEA---LQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 75.1 bits (185), Expect = 1e-14
 Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 54/198 (27%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRD+KP+N+L + PD  + +KLCDF  GS  +                    
Sbjct: 173 HS--FGICHRDIKPQNLL-LDPD-TAVLKLCDF--GSAKQLV-----------------R 209

Query: 308 AEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
            E            APE++    G  A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 210 GEPNVSYICSRYYRAPELI---FG--ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264

Query: 358 CGWQRGETCHAC-----QEILFHSIQQGHYDFPEGE---WSTI-----SDEAKDLIRRLL 404
              Q  E          ++I   +     + FP+ +   W+ +       EA  L  RLL
Sbjct: 265 ---QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 321

Query: 405 VKDARKRLSAASVLKHPW 422
                 RL+      H +
Sbjct: 322 EYTPTARLTPLEACAHSF 339

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 62.8 bits (153), Expect = 9e-11
 Identities = 52/236 (22%), Positives = 82/236 (34%), Gaps = 90/236 (38%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
           +++G G++  V       +    A+K   K+    R    +E++       H NI++L  
Sbjct: 60  KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKR-FKNRELQIMRKLD-HCNIVRLRY 114

Query: 112 -----------------LEYYEDD----------------ENHER-------------HK 125
                            L+Y  +                   + +             H 
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174

Query: 126 -RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             I HRD+KP+N+L + PD  + +KLCDF  GS  +                     E  
Sbjct: 175 FGICHRDIKPQNLL-LDPD-TAVLKLCDF--GSAKQLV-----------------RGEPN 213

Query: 185 ----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                     APE++    G  A+ Y    D+WS G V+  LL G P F G+ G D
Sbjct: 214 VSYICSRYYRAPELI---FG--ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 56/198 (28%), Positives = 78/198 (39%), Gaps = 54/198 (27%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRD+KP+N+L + P     +KL DF  GS                      +
Sbjct: 158 HS--IGICHRDIKPQNLL-LDPPS-GVLKLIDF--GSAKILI-----------------A 194

Query: 308 AEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
            E            APE++    G  A+ Y    D+WS G V+  L+ G P F G  G D
Sbjct: 195 GEPNVSYICSRYYRAPELI---FG--ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249

Query: 358 CGWQRGETCHAC-----QEILFHSIQQGHYDFPEGE---WSTI-----SDEAKDLIRRLL 404
              Q  E          ++I   +     + FP+     +S +       +A DLI RLL
Sbjct: 250 ---QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLL 306

Query: 405 VKDARKRLSAASVLKHPW 422
                 RL+A   L HP+
Sbjct: 307 EYTPSARLTAIEALCHPF 324

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 63.5 bits (155), Expect = 6e-11
 Identities = 56/280 (20%), Positives = 96/280 (34%), Gaps = 92/280 (32%)

Query: 11  SVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYR-LKGEILGKGAYASVQTCVN 69
           S  ++ +  N  ++    +  +  K   S   +  Q        +++G G++  V     
Sbjct: 2   SFTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKL 61

Query: 70  ILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL------------------ 111
           + ++ E A+K   K+    R    +E++     + HPN++ L                  
Sbjct: 62  VESD-EVAIK---KVLQDKR-FKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNL 115

Query: 112 -LEYYEDD-----ENHERHK-------------------------RIAHRDLKPENILCV 140
            LEY  +       ++ + K                          I HRD+KP+N+L +
Sbjct: 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL-L 174

Query: 141 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM----------APEIVN 190
            P     +KL DF  GS                      + E            APE++ 
Sbjct: 175 DPPS-GVLKLIDF--GSAKILI-----------------AGEPNVSYICSRYYRAPELI- 213

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
              G  A+ Y    D+WS G V+  L+ G P F G  G D
Sbjct: 214 --FG--ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 73.2 bits (180), Expect = 3e-14
 Identities = 62/237 (26%), Positives = 84/237 (35%), Gaps = 72/237 (30%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVETFHHCQGHP 106
           Y L  + LGKGAY  V   ++  T    AVK I     +S    R F+E+       GH 
Sbjct: 11  YELV-KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69

Query: 107 NIIQLL---------------EYYEDDENH--------ERHKR----------------- 126
           NI+ LL               +Y E D +           HK+                 
Sbjct: 70  NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129

Query: 127 IAHRDLKPENIL----CVHPDQLSPVKLCDFDL---GSGIKFNTSVHSPLATPLLLTPVG 179
           + HRD+KP NIL    C        VK+ DF L      I+  T+               
Sbjct: 130 LLHRDMKPSNILLNAECH-------VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182

Query: 180 SAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
               +          APEI+          Y K  D+WSLG ++  +LCG P F G+
Sbjct: 183 DQPILTDYVATRWYRAPEILLGST-----KYTKGIDMWSLGCILGEILCGKPIFPGS 234

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 55/222 (24%), Positives = 78/222 (35%), Gaps = 59/222 (26%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDL---GSGIKFNTSVHSPLATPL 300
           HS   G+ HRD+KP NIL    C        VK+ DF L      I+  T+         
Sbjct: 126 HS--GGLLHRDMKPSNILLNAECH-------VKVADFGLSRSFVNIRRVTNNIPLSINEN 176

Query: 301 LLTPVGSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
                     +          APEI+          Y K  D+WSLG ++  +LCG P F
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGST-----KYTKGIDMWSLGCILGEILCGKPIF 231

Query: 351 YGN----------------CGEDCGW-----------QRGETCHACQEILFHSIQQGHYD 383
            G+                  ED                 E     Q        +    
Sbjct: 232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291

Query: 384 FPEGE-WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             +    +  ++EA DL+ +LL  +  KR+SA   LKHP++S
Sbjct: 292 LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 73.1 bits (180), Expect = 4e-14
 Identities = 45/223 (20%), Positives = 70/223 (31%), Gaps = 72/223 (32%)

Query: 253 GIAHRDLKPENILCVHPDQL----------------------SPVKLCDFDLGSGIKFNT 290
            + H DLKPENIL   P                         + +KL DF  G    F +
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF--GCAT-FKS 213

Query: 291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
             H  +        + + ++ APE++   +     G+D   D+WS G V+  L  G   F
Sbjct: 214 DYHGSI--------INTRQYRAPEVI---LN---LGWDVSSDMWSFGCVLAELYTGSLLF 259

Query: 351 YGN-------CGEDCGWQRG-------ETCHACQEILFHSIQQGHYDFPEGEWS------ 390
             +         E                        + +  +    +PE   S      
Sbjct: 260 RTHEHMEHLAMMESI---IQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKH 316

Query: 391 ---------TISDEA-KDLIRRLLVKDARKRLSAASVLKHPWI 423
                     I  E   D +  +L  D   R S A +LKH ++
Sbjct: 317 VKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 48/240 (20%), Positives = 77/240 (32%), Gaps = 87/240 (36%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP----NII 109
             +G G +  V  C +I  +  YAVK++  +  ++RS    E +     Q       NI+
Sbjct: 41  RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRS-AKIEADILKKIQNDDINNNNIV 99

Query: 110 QLLEYYEDDENH-----E-------------------------------------RHKRI 127
           +    +    +H     E                                     R   +
Sbjct: 100 KYHGKF-MYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL 158

Query: 128 AHRDLKPENILCVHPDQL----------------------SPVKLCDFDLGSGIKFNTSV 165
            H DLKPENIL   P                         + +KL DF  G    F +  
Sbjct: 159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF--GCAT-FKSDY 215

Query: 166 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           H  +        + + ++ APE++   +     G+D   D+WS G V+  L  G   F  
Sbjct: 216 HGSI--------INTRQYRAPEVI---LN---LGWDVSSDMWSFGCVLAELYTGSLLFRT 261

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 71.9 bits (177), Expect = 5e-14
 Identities = 40/190 (21%), Positives = 70/190 (36%), Gaps = 29/190 (15%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VG 306
           HS    + HRDLKP N+     D    +K+ DF L   +          +    L+  + 
Sbjct: 137 HS--ANVLHRDLKPANLFINTED--LVLKIGDFGLARIMD------PHYSHKGHLSEGLV 186

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------C 358
           +  + +P ++ +        Y K  D+W+ G +   +L G   F G    +         
Sbjct: 187 TKWYRSPRLLLSPN-----NYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSA 414
                E       ++   I+      P    + +    S EA D + ++L      RL+A
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMT-EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300

Query: 415 ASVLKHPWIS 424
              L HP++S
Sbjct: 301 EEALSHPYMS 310

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 62.7 bits (153), Expect = 7e-11
 Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 78/242 (32%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVE 97
           + S + DL     + LG G    V + V+   +   A+K   K+            +E++
Sbjct: 9   LGSRYMDL-----KPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIK 60

Query: 98  TFHHCQGHPNIIQLL---------------------------EYYEDDENH--------E 122
                  H NI+++                            EY E D  +        E
Sbjct: 61  IIRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE 119

Query: 123 RHKR-----------------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 165
            H R                 + HRDLKP N+     D    +K+ DF L   +      
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMD----- 172

Query: 166 HSPLATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
               +    L+  + +  + +P ++ +        Y K  D+W+ G +   +L G   F 
Sbjct: 173 -PHYSHKGHLSEGLVTKWYRSPRLLLSPN-----NYTKAIDMWAAGCIFAEMLTGKTLFA 226

Query: 225 GN 226
           G 
Sbjct: 227 GA 228

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 71.1 bits (175), Expect = 9e-14
 Identities = 48/206 (23%), Positives = 72/206 (34%), Gaps = 58/206 (28%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +    HRD+KPENIL      +   KLCDF           +  P   
Sbjct: 118 CH----------KHNCIHRDVKPENILITKHSVI---KLCDFGFAR------LLTGPSDY 158

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                     E       +PE++   +G   + Y    D+W++G V   LL G P + G 
Sbjct: 159 ---YDD----EVATRWYRSPELL---VG--DTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206

Query: 354 CGED--------CG------WQRGETCHACQEILFHSIQQGHYDFP---EGEWSTISDEA 396
              D         G       Q   T        F  ++    +     E ++  IS  A
Sbjct: 207 SDVDQLYLIRKTLGDLIPRHQQVFSTNQ-----YFSGVKIPDPEDMEPLELKFPNISYPA 261

Query: 397 KDLIRRLLVKDARKRLSAASVLKHPW 422
             L++  L  D  +RL+   +L HP+
Sbjct: 262 LGLLKGCLHMDPTERLTCEQLLHHPY 287

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 51/226 (22%), Positives = 78/226 (34%), Gaps = 69/226 (30%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
           K   +G+G+Y  V  C N  T    A+K     +     +    +E+      + HPN++
Sbjct: 7   KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLV 65

Query: 110 QLL-------------EYYEDD-----ENHER---------------------HK-RIAH 129
            LL             EY +       + ++R                     HK    H
Sbjct: 66  NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM----- 184
           RD+KPENIL      +   KLCDF           +  P             E       
Sbjct: 126 RDVKPENILITKHSVI---KLCDFGFAR------LLTGPSDY---YDD----EVATRWYR 169

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +PE++   +G   + Y    D+W++G V   LL G P + G    D
Sbjct: 170 SPELL---VG--DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD 210

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 71.1 bits (175), Expect = 1e-13
 Identities = 50/216 (23%), Positives = 76/216 (35%), Gaps = 48/216 (22%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH             I HRD+KPENIL      +   KLCDF     +    +    +  
Sbjct: 140 CH----------SHNIIHRDIKPENILVSQSGVV---KLCDFGFARTL----AAPGEVYD 182

Query: 299 PLLLTPVGSAEFM---APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
             + T           APE++   +G     Y K  D+W++G +V  +  G P F G+  
Sbjct: 183 DEVAT-------RWYRAPELL---VG--DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230

Query: 356 ED--------CG------WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
            D         G       +          +    I+    +  E  +  +S+   DL +
Sbjct: 231 IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK--EREPLERRYPKLSEVVIDLAK 288

Query: 402 RLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQ 437
           + L  D  KR   A +L H +    G A R     Q
Sbjct: 289 KCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQ 324

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 56.5 bits (137), Expect = 7e-09
 Identities = 48/224 (21%), Positives = 77/224 (34%), Gaps = 65/224 (29%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
              ++G+G+Y  V  C N  T    A+K           +    +E++     + H N++
Sbjct: 29  NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR-HENLV 87

Query: 110 QLL-------------EYYEDD-----ENHER---------------------HK-RIAH 129
            LL             E+ +       E                         H   I H
Sbjct: 88  NLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIH 147

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM---AP 186
           RD+KPENIL      +   KLCDF     +    +    +    + T           AP
Sbjct: 148 RDIKPENILVSQSGVV---KLCDFGFARTL----AAPGEVYDDEVAT-------RWYRAP 193

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E++   +G     Y K  D+W++G +V  +  G P F G+   D
Sbjct: 194 ELL---VG--DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 53/205 (25%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS   GI HRDLKP NI+    C        +K+ DF L               T  ++T
Sbjct: 144 HS--AGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTA----------GTSFMMT 184

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----- 357
           P V +  + APE++         GY +  D+WS+G ++  ++ G   F G    D     
Sbjct: 185 PYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 238

Query: 358 ---CGWQRGETCHACQE--------------ILFHSIQQGHYDFPEGEWSTI-SDEAKDL 399
               G    E     Q                 F  +        + E + + + +A+DL
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 298

Query: 400 IRRLLVKDARKRLSAASVLKHPWIS 424
           + ++LV DA KR+S    L+HP+I+
Sbjct: 299 LSKMLVIDASKRISVDEALQHPYIN 323

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 63.9 bits (156), Expect = 4e-11
 Identities = 49/236 (20%), Positives = 80/236 (33%), Gaps = 79/236 (33%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVET 98
           V   +Q+L     + +G GA   V    + + E   A+K + +   +     R ++E+  
Sbjct: 23  VLKRYQNL-----KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 77

Query: 99  FHHCQGHPNIIQLL-------------------EYYEDDENH-------ERHKR------ 126
                 H NII LL                   E  + +                     
Sbjct: 78  MKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136

Query: 127 -----------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                      I HRDLKP NI+    C        +K+ DF L               T
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTA----------GT 179

Query: 172 PLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             ++TP V +  + APE++         GY +  D+WS+G ++  ++ G   F G 
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 229

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 61/218 (27%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           QD Y+L  ++ G+G Y+ V   +NI    +  VKI+  +    + ++ +E++   + +G 
Sbjct: 35  QDDYQLVRKL-GRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGG 90

Query: 106 PNIIQLL---------------EYYED----------DENHER-------------H-KR 126
           PNII L                E+  +           +   R             H   
Sbjct: 91  PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 150

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFMA 185
           I HRD+KP N++  H  +   ++L D+ L          + P          V S  F  
Sbjct: 151 IMHRDVKPHNVMIDHEHRK--LRLIDWGLAEF-------YHPGQE---YNVRVASRYFKG 198

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
           PE++  +       YD   D+WSLG ++  ++    PF
Sbjct: 199 PELLVDYQ-----MYDYSLDMWSLGCMLASMIFRKEPF 231

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 43/197 (21%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VG 306
           HS   GI HRD+KP N++  H  +   ++L D+ L          + P          V 
Sbjct: 147 HS--MGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEF-------YHPGQE---YNVRVA 192

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC-------- 358
           S  F  PE++  +       YD   D+WSLG ++  ++    PF+   G D         
Sbjct: 193 SRYFKGPELLVDYQ-----MYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIA 245

Query: 359 ---------GWQRGETCHACQEIL----FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLV 405
                     +                  HS ++            +S EA D + +LL 
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305

Query: 406 KDARKRLSAASVLKHPW 422
            D + RL+A   ++HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 30/166 (18%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + H+    I HRD+KP+NIL +  +    +K+ DF    GI    S  S   T  +L   
Sbjct: 124 IKHAHDMRIVHRDIKPQNIL-IDSN--KTLKIFDF----GIAKALSETSLTQTNHVL--- 173

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ ++ +PE      G      D+  D++S+G+V+Y +L G PPF            GET
Sbjct: 174 GTVQYFSPEQA---KGEAT---DECTDIYSIGIVLYEMLVGEPPF-----------NGET 216

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
             +   I    IQ    +        I     ++I R   KD   R
Sbjct: 217 AVS---IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR 259

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 66.1 bits (162), Expect = 4e-12
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 18/105 (17%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H+    I HRD+KP+NIL +  +    +K+ DF    GI    S  S   T  +L   G+
Sbjct: 128 HDMR--IVHRDIKPQNIL-IDSN--KTLKIFDF----GIAKALSETSLTQTNHVL---GT 175

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            ++ +PE      G      D+  D++S+G+V+Y +L G PPF G
Sbjct: 176 VQYFSPEQA---KGEAT---DECTDIYSIGIVLYEMLVGEPPFNG 214

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 70.4 bits (173), Expect = 3e-13
 Identities = 42/207 (20%), Positives = 61/207 (29%), Gaps = 67/207 (32%)

Query: 248 HSIQQGIAHRDLKPENIL-----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 302
           H     + HRD+KP N+L              +KLCDF    G           A  L  
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGT-------LKLCDF----G----------SAKKL-- 182

Query: 303 TPVGSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
                +E            APE++    G     Y    D+WS+G +   ++ G P F G
Sbjct: 183 ---SPSEPNVAYICSRYYRAPELI---FG--NQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234

Query: 353 NCGED-----------------CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE 395
           +                            T                  F +      + E
Sbjct: 235 DNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSN---VFSDHSLKD-AKE 290

Query: 396 AKDLIRRLLVKDARKRLSAASVLKHPW 422
           A DL+  LL     +R+     L HP+
Sbjct: 291 AYDLLSALLQYLPEERMKPYEALCHPY 317

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 60.0 bits (146), Expect = 7e-10
 Identities = 49/246 (19%), Positives = 76/246 (30%), Gaps = 104/246 (42%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR--SRVFKEVETFHHCQGHPNIIQL 111
            + G+G + +VQ      T +  A+K   K+    R  +R  + ++       HPNI+QL
Sbjct: 29  RMAGQGTFGTVQLGKEKSTGMSVAIK---KVIQDPRFRNRELQIMQDLAVLH-HPNIVQL 84

Query: 112 --------------------LEYYEDDEN------------------------------- 120
                               +EY  D  +                               
Sbjct: 85  QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144

Query: 121 -HERHKRIAHRDLKPENIL-----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
            H     + HRD+KP N+L              +KLCDF    G           A  L 
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGT-------LKLCDF----G----------SAKKL- 182

Query: 175 LTPVGSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
                 +E            APE++    G     Y    D+WS+G +   ++ G P F 
Sbjct: 183 ----SPSEPNVAYICSRYYRAPELI---FG--NQHYTTAVDIWSVGCIFAEMMLGEPIFR 233

Query: 225 GNCGED 230
           G+    
Sbjct: 234 GDNSAG 239

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 70.0 bits (172), Expect = 4e-13
 Identities = 48/207 (23%), Positives = 75/207 (36%), Gaps = 55/207 (26%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           H     + HRDLKP N+L    C        +K+CDF L   I  + + +S         
Sbjct: 129 HG--SNVIHRDLKPSNLLINSNCD-------LKVCDFGLARIIDESAADNSE-------- 171

Query: 304 PVGSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
           P G    M          APE++          Y +  D+WS G ++  L    P F G 
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSA-----KYSRAMDVWSCGCILAELFLRRPIFPGR 226

Query: 354 CGEDCGWQRGETCHAC----QEILFHSIQQGHY--------DFPEGEWSTI----SDEAK 397
              D   Q             +     I+             +P      +    + +  
Sbjct: 227 ---DYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGI 283

Query: 398 DLIRRLLVKDARKRLSAASVLKHPWIS 424
           DL++R+LV D  KR++A   L+HP++ 
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQ 310

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 54/238 (22%), Positives = 84/238 (35%), Gaps = 84/238 (35%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGH 105
           ++LK  +LG+GAY  V +  +  T    A+K I+  P        R  +E++   H + H
Sbjct: 13  FQLK-SLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFK-H 68

Query: 106 PNIIQLL------------------EYYEDDENH--------ERHKR------------- 126
            NII +                   E  + D +         + H +             
Sbjct: 69  ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128

Query: 127 ----IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
               + HRDLKP N+L    C        +K+CDF L   I  + + +S         P 
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCD-------LKVCDFGLARIIDESAADNSE--------PT 173

Query: 179 GSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           G    M          APE++          Y +  D+WS G ++  L    P F G 
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSA-----KYSRAMDVWSCGCILAELFLRRPIFPGR 226

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 68.8 bits (169), Expect = 5e-13
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 16/108 (14%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTP 304
           L  S Q GI HRD+KP NI+ +     + VK+ DF    GI +      + +     +  
Sbjct: 129 LNFSHQNGIIHRDVKPANIM-ISAT--NAVKVMDF----GIARAIADSGNSVTQTAAV-- 179

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           +G+A++++PE      G      D R D++SLG V+Y +L G PPF G
Sbjct: 180 IGTAQYLSPEQA---RGDSV---DARSDVYSLGCVLYEVLTGEPPFTG 221

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 18/106 (16%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVG 179
           H+    I HRD+KP NI+ +     + VK+ DF    GI +      + +     +  +G
Sbjct: 133 HQNG--IIHRDVKPANIM-ISAT--NAVKVMDF----GIARAIADSGNSVTQTAAV--IG 181

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           +A++++PE      G      D R D++SLG V+Y +L G PPF G
Sbjct: 182 TAQYLSPEQA---RGDSV---DARSDVYSLGCVLYEVLTGEPPFTG 221

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 68.5 bits (168), Expect = 7e-13
 Identities = 42/220 (19%), Positives = 74/220 (33%), Gaps = 57/220 (25%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
           GE+LGKG +       +  T     +K + +    ++    KEV+     + HPN+++ +
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE-HPNVLKFI 73

Query: 113 -------------EYYE----DD--ENHERH----------------------KRIAHRD 131
                        EY +        ++ +                          I HRD
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133

Query: 132 LKPENILCVHPDQLSPVKLCDFDL------GSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           L   N L V   +   V + DF L                          T VG+  +MA
Sbjct: 134 LNSHNCL-V--RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           PE++N         YD++ D++S G+V+  ++        
Sbjct: 191 PEMIN--GRS----YDEKVDVFSFGIVLCEIIGRVNADPD 224

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 63.1 bits (154), Expect = 4e-11
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL------GSGIKFNTSVHSPLATPLLLTP 304
              I HRDL   N L V   +   V + DF L                          T 
Sbjct: 126 SMNIIHRDLNSHNCL-V--RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
           VG+  +MAPE++N         YD++ D++S G+V+  ++        
Sbjct: 183 VGNPYWMAPEMIN--GRS----YDEKVDVFSFGIVLCEIIGRVNADPD 224

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 68.9 bits (169), Expect = 8e-13
 Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 43/194 (22%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS   G+ HRDLKP N+     C        +K+ DF L                   +T
Sbjct: 143 HS--AGVVHRDLKPGNLAVNEDCE-------LKILDFGLARHADAE------------MT 181

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----- 357
             V +  + APE++ ++M      Y++  D+WS+G ++  +L G   F G    D     
Sbjct: 182 GYVVTRWYRAPEVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236

Query: 358 ---CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARK 410
               G    E      +    S  Q     P  +++ +    S +A DL+ ++L  D  K
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296

Query: 411 RLSAASVLKHPWIS 424
           RL+AA  L HP+  
Sbjct: 297 RLTAAQALTHPFFE 310

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 62.7 bits (153), Expect = 8e-11
 Identities = 46/236 (19%), Positives = 82/236 (34%), Gaps = 80/236 (33%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVET 98
           +   +          +G GAY SV + ++  +  + A+K + +         R ++E+  
Sbjct: 22  LPKTYVSP-----THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 76

Query: 99  FHHCQGHPNIIQLL-------------------EYYEDDENH-------ERHKR------ 126
             H Q H N+I LL                    + + D          E   +      
Sbjct: 77  LKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM 135

Query: 127 -----------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                      + HRDLKP N+     C        +K+ DF L                
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGNLAVNEDCE-------LKILDFGLARHADAE--------- 179

Query: 172 PLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
              +T  V +  + APE++ ++M      Y++  D+WS+G ++  +L G   F G 
Sbjct: 180 ---MTGYVVTRWYRAPEVILSWM-----HYNQTVDIWSVGCIMAEMLTGKTLFKGK 227

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 41/240 (17%), Positives = 72/240 (30%), Gaps = 67/240 (27%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+ +  I H D+KPENIL    +Q       +              S ++T         
Sbjct: 163 HT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL 221

Query: 308 AEFMAPEIV-----------NAFMG---------------PEA---SGYDKRCDLWSLGV 338
              + P+             NA                   E    SGY+   D+WS   
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTAC 281

Query: 339 VVYILLCGYPPFYGNCGEDCG--------------------WQRGETCH----------A 368
           + + L  G   F  + GE+                         G+              
Sbjct: 282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341

Query: 369 CQEILFHSIQQ---GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
             ++    + +     Y++ + E    +    D +  +L     KR +AA  L+HPW+++
Sbjct: 342 ITKLKPWGLFEVLVEKYEWSQEE----AAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 44/268 (16%), Positives = 74/268 (27%), Gaps = 84/268 (31%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH--- 101
           F   Y +  + LG G +++V    +I  +   A+K++ K   H       E+        
Sbjct: 35  FNGRYHVIRK-LGWGHFSTVWLSWDIQGKKFVAMKVV-KSAEHYTETALDEIRLLKSVRN 92

Query: 102 ----CQGHPNIIQLLEYYEDDENHERH--------------------------------- 124
                     ++QLL+ ++    +  H                                 
Sbjct: 93  SDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 152

Query: 125 -------------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                         RI H D+KPENIL    +Q       +              S ++T
Sbjct: 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 212

Query: 172 PLLLTPVGSAEFMAPEIV-----------NAFMG---------------PEA---SGYDK 202
                       + P+             NA                   E    SGY+ 
Sbjct: 213 APATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 272

Query: 203 RCDLWSLGVVVYILLCGYPPFYGNCGED 230
             D+WS   + + L  G   F  + GE+
Sbjct: 273 PADIWSTACMAFELATGDYLFEPHSGEE 300

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 44/195 (22%), Positives = 72/195 (36%), Gaps = 42/195 (21%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           H    G+ HRDL P NIL             + +CDF+L      + +           T
Sbjct: 151 HE--AGVVHRDLHPGNILLADNND-------ITICDFNLAREDTADAN----------KT 191

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----- 357
             V    + APE+V  F G     + K  D+WS G V+  +      F G+   +     
Sbjct: 192 HYVTHRWYRAPELVMQFKG-----FTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246

Query: 358 ---CGWQRGETCHACQ-EILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDAR 409
               G  + E             ++    + P   W+ +       A DLI ++L  + +
Sbjct: 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306

Query: 410 KRLSAASVLKHPWIS 424
           +R+S    L+HP+  
Sbjct: 307 RRISTEQALRHPYFE 321

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 48/239 (20%), Positives = 76/239 (31%), Gaps = 86/239 (35%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS-----------RVFKEVE 97
           Y ++   +  G+Y +V   V+       A+K +       R+           RV +E+ 
Sbjct: 24  YTVQ-RFISSGSYGAVCAGVDSEGI-PVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81

Query: 98  TFHHCQGHPNIIQLL------------------EYYEDDENH----------ERHKR--- 126
             +H   HPNI+ L                   E    D              +H +   
Sbjct: 82  LLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140

Query: 127 --------------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 168
                         + HRDL P NIL             + +CDF+L      + +    
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNND-------ITICDFNLAREDTADAN---- 189

Query: 169 LATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                  T  V    + APE+V  F      G+ K  D+WS G V+  +      F G+
Sbjct: 190 ------KTHYVTHRWYRAPELVMQFK-----GFTKLVDMWSAGCVMAEMFNRKALFRGS 237

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 22/188 (11%)

Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
           H     L    +  I+HRD+K +N+L +  +      + DF L               + 
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVL-LKNNLT--ACIADFGL-------ALKFEAGKSA 187

Query: 300 LLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 VG+  +MAPE++   +  +      R D++++G+V++ L        G   E  
Sbjct: 188 GDTHGQVGTRRYMAPEVLEGAINFQRD-AFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246

Query: 359 ---GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVK----DARKR 411
                + G+  H   E +   +       P             ++   + +    DA  R
Sbjct: 247 LPFEEEIGQ--HPSLEDMQEVVVHKKKR-PVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303

Query: 412 LSAASVLK 419
           LSA  V +
Sbjct: 304 LSAGCVGE 311

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 39/232 (16%), Positives = 70/232 (30%), Gaps = 71/232 (30%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVF-KEVETFHHCQGHPNIIQL 111
            E+  +G +  V      L     AVKI        +S     EV +    + H NI+Q 
Sbjct: 29  LEVKARGRFGCVWKAQ--LLNEYVAVKIFP--IQDKQSWQNEYEVYSLPGMK-HENILQF 83

Query: 112 L-----------------EYYE------------------------------------DD 118
           +                  ++E                                      
Sbjct: 84  IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPG 143

Query: 119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP- 177
                   I+HRD+K +N+L +  +      + DF L               +       
Sbjct: 144 LKDGHKPAISHRDIKSKNVL-LKNNLT--ACIADFGL-------ALKFEAGKSAGDTHGQ 193

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
           VG+  +MAPE++   +  +      R D++++G+V++ L        G   E
Sbjct: 194 VGTRRYMAPEVLEGAINFQRD-AFLRIDMYAMGLVLWELASRCTAADGPVDE 244

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 68.7 bits (168), Expect = 1e-12
 Identities = 49/258 (18%), Positives = 89/258 (34%), Gaps = 67/258 (25%)

Query: 15  ATSKSNAERIEEARNKRRRKKTATSLVTSCFQ--DLYRLKGEILGKGAYASVQTCVNILT 72
             S S  E  +  ++   +   +     S +Q  D Y ++  ++G G+Y  V    + L 
Sbjct: 19  TVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIR-HLIGTGSYGHVCEAYDKLE 77

Query: 73  ELEYAVKIIDKLPGHSR--SRVFKEVETFHHCQGHPNIIQLL------------------ 112
           +   A+K I ++        R+ +E+   +    H +++++L                  
Sbjct: 78  KRVVAIKKILRVFEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVL 136

Query: 113 EYYEDDENH---------ERHKR-----------------IAHRDLKPENILCVHPDQLS 146
           E  + D            E H +                 I HRDLKP N L    +Q  
Sbjct: 137 EIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDC 193

Query: 147 PVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM----------GPE 196
            VK+CDF L   + +  + +S L        +    F   + +   +           PE
Sbjct: 194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPE 253

Query: 197 ----ASGYDKRCDLWSLG 210
                  Y +  D+WS+G
Sbjct: 254 LILLQENYTEAIDVWSIG 271

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 64.5 bits (157), Expect = 4e-11
 Identities = 47/235 (20%), Positives = 74/235 (31%), Gaps = 64/235 (27%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRDLKP N L    +Q   VK+CDF L   + +  + +S L        +  
Sbjct: 173 HS--AGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227

Query: 308 AEFMAPEIVNAFM----------GPE----ASGYDKRCDLWSLG-----------VVVYI 342
             F   + +   +           PE       Y +  D+WS+G             V  
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287

Query: 343 LLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDF------PEGEWSTI---- 392
                P F G+        +            +   Q +  F       E +   +    
Sbjct: 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGN-RDQLNVIFNILGTPSEEDIEALEKED 346

Query: 393 -----------------------SDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
                                  S +A  L++R+LV +  KR++    L HP+  
Sbjct: 347 AKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 43/194 (22%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           H+   GI HRDLKP N+     C        +K+ DF L                   +T
Sbjct: 145 HA--AGIIHRDLKPGNLAVNEDCE-------LKILDFGLARQADSE------------MT 183

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----- 357
             V +  + APE++  +M      Y +  D+WS+G ++  ++ G   F G+   D     
Sbjct: 184 GYVVTRWYRAPEVILNWMR-----YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238

Query: 358 ---CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARK 410
               G    E     Q     +  +G  +  + ++++I    S  A +L+ ++LV DA +
Sbjct: 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 298

Query: 411 RLSAASVLKHPWIS 424
           R++A   L HP+  
Sbjct: 299 RVTAGEALAHPYFE 312

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 49/237 (20%), Positives = 85/237 (35%), Gaps = 81/237 (34%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVET 98
           V + ++DL     + +G GAY +V + V+  T  + A+K + +         R ++E+  
Sbjct: 23  VRAVYRDL-----QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL 77

Query: 99  FHHCQGHPNIIQLL-------------------EYYEDDENH--------ERHKR----- 126
             H + H N+I LL                    +   D           E   +     
Sbjct: 78  LKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 136

Query: 127 ------------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 170
                       I HRDLKP N+     C        +K+ DF L               
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCE-------LKILDFGLARQADSE-------- 181

Query: 171 TPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
               +T  V +  + APE++  +M      Y +  D+WS+G ++  ++ G   F G+
Sbjct: 182 ----MTGYVVTRWYRAPEVILNWM-----RYTQTVDIWSVGCIMAEMITGKTLFKGS 229

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 54/198 (27%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           HS   GI HRD+KP+N+L V+    + +KLCDF  GS  K                    
Sbjct: 158 HS--LGICHRDIKPQNLL-VNSKDNT-LKLCDF--GSAKKLI-----------------P 194

Query: 308 AEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
           +E            APE++   +G  A+ Y    DLWS+G V   L+ G P F G    D
Sbjct: 195 SEPSVAYICSRFYRAPELM---LG--ATEYTPSIDLWSIGCVFGELILGKPLFSGETSID 249

Query: 358 CGWQRGETCHAC-----QEILFHSIQQGHYDFPEGE---WSTI-----SDEAKDLIRRLL 404
              Q             ++++  +       FP  +   W  I        A DL+ ++L
Sbjct: 250 ---QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306

Query: 405 VKDARKRLSAASVLKHPW 422
             +   R++    + HP+
Sbjct: 307 RYEPDLRINPYEAMAHPF 324

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 50.9 bits (122), Expect = 6e-07
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 36/115 (31%)

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM- 184
            I HRD+KP+N+L V+    + +KLCDF  GS  K                    +E   
Sbjct: 161 GICHRDIKPQNLL-VNSKDNT-LKLCDF--GSAKKLI-----------------PSEPSV 199

Query: 185 ---------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                    APE++   +G  A+ Y    DLWS+G V   L+ G P F G    D
Sbjct: 200 AYICSRFYRAPELM---LG--ATEYTPSIDLWSIGCVFGELILGKPLFSGETSID 249

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 43/194 (22%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS    I HRDLKP N+     C        +K+ DF L                   +T
Sbjct: 149 HS--ADIIHRDLKPSNLAVNEDCE-------LKILDFGLARHTADE------------MT 187

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----- 357
             V +  + APEI+  +M      Y++  D+WS+G ++  LL G   F G    D     
Sbjct: 188 GYVATRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242

Query: 358 ---CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARK 410
               G    E           +  Q     P+  ++ +    +  A DL+ ++LV D+ K
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 302

Query: 411 RLSAASVLKHPWIS 424
           R++AA  L H + +
Sbjct: 303 RITAAQALAHAYFA 316

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 55/237 (23%), Positives = 83/237 (35%), Gaps = 81/237 (34%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVET 98
           V   +Q+L       +G GAY SV    +  T L  AVK + +         R ++E+  
Sbjct: 27  VPERYQNL-----SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81

Query: 99  FHHCQGHPNIIQLL-------------------EYYEDDENH--------ERHKR----- 126
             H + H N+I LL                        D N+        + H +     
Sbjct: 82  LKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 140

Query: 127 ------------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 170
                       I HRDLKP N+     C        +K+ DF L               
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCE-------LKILDFGLARHTADE-------- 185

Query: 171 TPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
               +T  V +  + APEI+  +M      Y++  D+WS+G ++  LL G   F G 
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 233

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 67.3 bits (165), Expect = 3e-12
 Identities = 47/205 (22%), Positives = 74/205 (36%), Gaps = 59/205 (28%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS    + HRDLKP N+L    C        +K+CDF L      +            LT
Sbjct: 145 HS--ANVLHRDLKPSNLLLNTTCD-------LKICDFGLARVADPDHD------HTGFLT 189

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------- 353
             V +  + APEI+         GY K  D+WS+G ++  +L   P F G          
Sbjct: 190 EYVATRWYRAPEIMLNSK-----GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244

Query: 354 -------CGEDCGWQRGE-------TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDL 399
                    ED              +     ++ ++ +      FP         +A DL
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL------FP-----NADSKALDL 293

Query: 400 IRRLLVKDARKRLSAASVLKHPWIS 424
           + ++L  +  KR+     L HP++ 
Sbjct: 294 LDKMLTFNPHKRIEVEQALAHPYLE 318

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 52/236 (22%), Positives = 82/236 (34%), Gaps = 75/236 (31%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVET 98
           V   + +L       +G+GAY  V +  + L ++  A+K I       + + R  +E++ 
Sbjct: 25  VGPRYTNL-----SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKI 78

Query: 99  FHHCQGHPNIIQLL------------------EYYEDDENH--------ERHKR------ 126
               + H NII +                   +  E D             H        
Sbjct: 79  LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQI 137

Query: 127 -----------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                      + HRDLKP N+L    C        +K+CDF L      +         
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD-------LKICDFGLARVADPDHD------H 184

Query: 172 PLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
              LT  V +  + APEI+         GY K  D+WS+G ++  +L   P F G 
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSK-----GYTKSIDIWSVGCILAEMLSNRPIFPGK 235

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 46/222 (20%), Positives = 72/222 (32%), Gaps = 70/222 (31%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVETFHHCQGHP 106
           Y +K  ++G+G+Y  V    +  TE   A+K ++++        R+ +E+   +  +   
Sbjct: 28  YIIK-HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK-SD 85

Query: 107 NIIQLL------------------EYYEDDENH---------ERHKR------------- 126
            II+L                   E  + D            E H +             
Sbjct: 86  YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145

Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDL----GSGIKFNTSVHSPLATPLLLTPV 178
               I HRDLKP N L    +Q   VK+CDF L     S    N                
Sbjct: 146 HESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202

Query: 179 GSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLG 210
              + +          APE++          Y K  D+WS G
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQE-----NYTKSIDIWSTG 239

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 44/232 (18%), Positives = 65/232 (28%), Gaps = 66/232 (28%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL----GSGIKFNTSVHSPLATPLLLT 303
           H    GI HRDLKP N L    +Q   VK+CDF L     S    N              
Sbjct: 146 HE--SGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200

Query: 304 PVGSAEFM----------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                + +          APE++          Y K  D+WS G +   LL        +
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQE-----NYTKSIDIWSTGCIFAELLNMLQSHIND 255

Query: 354 C--------GEDCGWQRGETCHACQEILFHSIQQGHYDF-----PEGE--WSTISDEAKD 398
                    G  C     +          +   Q +  F     P  +   +    E   
Sbjct: 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSN-RDQLNIIFNIIGTPTEDDLKNINKPEVIK 314

Query: 399 --------------------------LIRRLLVKDARKRLSAASVLKHPWIS 424
                                     L+  +L  +  KR++    L HP++ 
Sbjct: 315 YIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 66.4 bits (162), Expect = 4e-12
 Identities = 48/283 (16%), Positives = 87/283 (30%), Gaps = 66/283 (23%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-GHPNIIQL 111
            E++G+G Y +V      L E   AVK+       +R     E   +      H NI + 
Sbjct: 18  LELIGRGRYGAVYKG--SLDERPVAVKV---FSFANRQNFINEKNIYRVPLMEHDNIARF 72

Query: 112 L------------------EYYE----------------------------------DDE 119
           +                  EYY                                   +  
Sbjct: 73  IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELP 132

Query: 120 NHERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP- 177
             + +K  I+HRDL   N+L           + DF L S       +  P          
Sbjct: 133 RGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGL-SMRLTGNRLVRPGEEDNAAISE 188

Query: 178 VGSAEFMAPEIV-NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 236
           VG+  +MAPE++  A    +     K+ D+++LG++ + +       +        +Q  
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG-ESVPEYQMA 247

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD 279
                     F  +Q  ++    +P+       + L+   L +
Sbjct: 248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKE 290

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 15/177 (8%)

Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
            I+HRDL   N+L           + DF L S       +  P          VG+  +M
Sbjct: 140 AISHRDLNSRNVLV---KNDGTCVISDFGL-SMRLTGNRLVRPGEEDNAAISEVGTIRYM 195

Query: 312 APEIV-NAFMGPEASGYDKRCDLWSLGVVVYILL--CGYPPFYGNCGEDC---GWQRGET 365
           APE++  A    +     K+ D+++LG++ + +   C       +  E       + G  
Sbjct: 196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNH 255

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEA---KDLIRRLLVKDARKRLSAASVLK 419
                  +  S ++    FPE  W   S      K+ I     +DA  RL+A    +
Sbjct: 256 PTFEDMQVLVSREKQRPKFPE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 67.2 bits (164), Expect = 5e-12
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 53/205 (25%)

Query: 248 HSIQQGIAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           HS   GI HRDLKP NI+    C        +K+ DF L               T  ++T
Sbjct: 181 HS--AGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTA----------GTSFMMT 221

Query: 304 P-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----- 357
           P V +  + APE++         GY +  D+WS+G ++  ++     F G    D     
Sbjct: 222 PYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 275

Query: 358 ---CGWQRGETCHACQEILFHSIQQ-GHYD-------FP-------EGEWSTISDEAKDL 399
               G    E     Q  + + ++    Y        FP              + +A+DL
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335

Query: 400 IRRLLVKDARKRLSAASVLKHPWIS 424
           + ++LV D  KR+S    L+HP+I+
Sbjct: 336 LSKMLVIDPAKRISVDDALQHPYIN 360

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 61.0 bits (148), Expect = 4e-10
 Identities = 47/236 (19%), Positives = 79/236 (33%), Gaps = 79/236 (33%)

Query: 41  VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS--RVFKEVET 98
           V   +Q+L     + +G GA   V    + + +   A+K + +   +     R ++E+  
Sbjct: 60  VLKRYQNL-----KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114

Query: 99  FHHCQGHPNIIQLL-------------------EYYEDDENH-------ERHKR------ 126
                 H NII LL                   E  + +                     
Sbjct: 115 MKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173

Query: 127 -----------IAHRDLKPENIL----CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                      I HRDLKP NI+    C        +K+ DF L               T
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCT-------LKILDFGLARTA----------GT 216

Query: 172 PLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             ++TP V +  + APE++         GY +  D+WS+G ++  ++     F G 
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGR 266

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 50/203 (24%), Positives = 74/203 (36%), Gaps = 53/203 (26%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          Q  I HRDLKP+N+L      L   KL DF L        +   P+ +
Sbjct: 135 CH----------QHRILHRDLKPQNLLINSDGAL---KLADFGLAR------AFGIPVRS 175

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
               T     E +     AP++    MG  +  Y    D+WS+G +   ++ G P F G 
Sbjct: 176 ---YTH----EVVTLWYRAPDV---LMG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223

Query: 354 CGED--------CG------WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDL 399
             +D         G      W + +     ++  F   Q                E  DL
Sbjct: 224 TDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF---QVFEKKPWSSIIPGFCQEGIDL 280

Query: 400 IRRLLVKDARKRLSAASVLKHPW 422
           +  +L  D  KR+SA   + HP+
Sbjct: 281 LSNMLCFDPNKRISARDAMNHPY 303

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 41/171 (23%), Positives = 62/171 (36%), Gaps = 66/171 (38%)

Query: 105 HPNIIQLL-------------EYYEDD-----ENHER----------------------H 124
           HPNI+ L+             E+ E D     + ++                        
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            RI HRDLKP+N+L      L   KL DF L        +   P+ +    T     E +
Sbjct: 138 HRILHRDLKPQNLLINSDGAL---KLADFGLAR------AFGIPVRS---YTH----EVV 181

Query: 185 -----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                AP++    MG  +  Y    D+WS+G +   ++ G P F G   +D
Sbjct: 182 TLWYRAPDV---LMG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 53/214 (24%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +Q + HRDLKP+N+L     +L   KL DF L        +   P  T
Sbjct: 116 CH----------RQKVLHRDLKPQNLLINERGEL---KLADFGLAR------AKSIPTKT 156

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
                     E +      P+I    +G  ++ Y  + D+W +G + Y +  G P F G+
Sbjct: 157 ---YDN----EVVTLWYRPPDI---LLG--STDYSTQIDMWGVGCIFYEMATGRPLFPGS 204

Query: 354 CGED--------CG------WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDL 399
             E+         G      W    +    +   +    +   +        +  +  DL
Sbjct: 205 TVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY---PKYRAEALLSHAPRLDSDGADL 261

Query: 400 IRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
           + +LL  + R R+SA   +KHP+  + G     L
Sbjct: 262 LTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKL 295

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 50.3 bits (121), Expect = 7e-07
 Identities = 52/229 (22%), Positives = 84/229 (36%), Gaps = 76/229 (33%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII-----DKLPGHSRSRVFKEVETFHHCQGHP 106
           K + LG+G YA+V    + LT+   A+K I     +  P        +EV      + H 
Sbjct: 6   KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP----CTAIREVSLLKDLK-HA 60

Query: 107 NIIQLL-------------EYYEDD-----ENHER----------------------HKR 126
           NI+ L              EY + D     ++                          ++
Sbjct: 61  NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM-- 184
           + HRDLKP+N+L     +L   KL DF L        +   P  T          E +  
Sbjct: 121 VLHRDLKPQNLLINERGEL---KLADFGLAR------AKSIPTKT---YDN----EVVTL 164

Query: 185 ---APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
               P+I    +G  ++ Y  + D+W +G + Y +  G P F G+  E+
Sbjct: 165 WYRPPDI---LLG--STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 44/205 (21%), Positives = 71/205 (34%), Gaps = 52/205 (25%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENIL--CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
           CH           +   HRDLKP+N+L       +   +K+ DF L        +   P+
Sbjct: 148 CH----------SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR------AFGIPI 191

Query: 297 ATPLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
                 T     E +      PEI    +G  +  Y    D+WS+  +   +L   P F 
Sbjct: 192 RQ---FTH----EIITLWYRPPEI---LLG--SRHYSTSVDIWSIACIWAEMLMKTPLFP 239

Query: 352 GNCGEDCGWQRGETCHAC----QEI--------LFHSI--QQGHYDFPEGEWSTISDEAK 397
           G+   D   Q  +                     +     +           + + DE  
Sbjct: 240 GDSEID---QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGL 296

Query: 398 DLIRRLLVKDARKRLSAASVLKHPW 422
           DL+  +L  D  KR+SA + L+HP+
Sbjct: 297 DLLTAMLEMDPVKRISAKNALEHPY 321

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 56/278 (20%), Positives = 88/278 (31%), Gaps = 92/278 (33%)

Query: 10  HSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVN 69
           H          A+             +ATS+    ++     +   LG+G Y  V   ++
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMSVSAAPSATSI--DRYR-----RITKLGEGTYGEVYKAID 55

Query: 70  ILTELEYAVKIIDKLPGHSRSRVFKEVETF-----------HHCQGHPNIIQLL------ 112
            +T    A+K I         R+  E E                Q H NII+L       
Sbjct: 56  TVTNETVAIKRI---------RLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHN 105

Query: 113 -------EYYEDD-----ENHER---------------------HKRIAHRDLKPENIL- 138
                  EY E+D     + +                        +R  HRDLKP+N+L 
Sbjct: 106 HRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165

Query: 139 -CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM-----APEIVNAF 192
                 +   +K+ DF L        +   P+      T     E +      PEI    
Sbjct: 166 SVSDASETPVLKIGDFGLAR------AFGIPIRQ---FTH----EIITLWYRPPEI---L 209

Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +G  +  Y    D+WS+  +   +L   P F G+   D
Sbjct: 210 LG--SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID 245

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 50/205 (24%), Positives = 70/205 (34%), Gaps = 53/205 (25%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH          +  I HRDLKP+N+L     QL   KL DF L        +   P+ T
Sbjct: 124 CH----------ENKILHRDLKPQNLLINKRGQL---KLGDFGLAR------AFGIPVNT 164

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
               +     E +     AP++    MG  +  Y    D+WS G ++  ++ G P F G 
Sbjct: 165 ---FSS----EVVTLWYRAPDV---LMG--SRTYSTSIDIWSCGCILAEMITGKPLFPGT 212

Query: 354 CGED--------CG------WQRGETC--HACQEILFHSIQQGHYDFPEGEWSTISDEAK 397
             E+         G      W    T        I     +             +     
Sbjct: 213 NDEEQLKLIFDIMGTPNESLWP-SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLM 271

Query: 398 DLIRRLLVKDARKRLSAASVLKHPW 422
           D +  LL  +   RLSA   L HPW
Sbjct: 272 DFLHGLLQLNPDMRLSAKQALHHPW 296

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 81/234 (34%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII-----DKLPGHSRSRVFKEVETFHHCQGHP 106
           + E LG G YA+V   +N  T +  A+K +     +  P    S   +E+      + H 
Sbjct: 9   QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTP----STAIREISLMKELK-HE 63

Query: 107 NIIQLL-------------EYYEDD-----ENHER------------------------- 123
           NI++L              E+ ++D     ++                            
Sbjct: 64  NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123

Query: 124 --HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
               +I HRDLKP+N+L     QL   KL DF L        +   P+ T    +     
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQL---KLGDFGLAR------AFGIPVNT---FSS---- 167

Query: 182 EFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E +     AP++    MG  +  Y    D+WS G ++  ++ G P F G   E+
Sbjct: 168 EVVTLWYRAPDV---LMG--SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 63.3 bits (155), Expect = 3e-11
 Identities = 43/202 (21%), Positives = 74/202 (36%), Gaps = 52/202 (25%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH           + + HRDLKP+N+L     +L   K+ DF L        +   P+  
Sbjct: 116 CH----------DRRVLHRDLKPQNLLINREGEL---KIADFGLAR------AFGIPVRK 156

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
               T     E +     AP++    MG  +  Y    D+WS+G +   ++ G P F G 
Sbjct: 157 ---YTH----EIVTLWYRAPDV---LMG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204

Query: 354 CGEDCGWQRGETCHAC----QEIL--FHSIQQGHYDFP-------EGEWSTISDEAKDLI 400
              D   Q             +       + +   +F        E     + +   DL+
Sbjct: 205 SEAD---QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLL 261

Query: 401 RRLLVKDARKRLSAASVLKHPW 422
            ++L  D  +R++A   L+H +
Sbjct: 262 SKMLKLDPNQRITAKQALEHAY 283

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 66/171 (38%)

Query: 105 HPNIIQLL-------------EYYEDD-----ENHER----------------------H 124
           H NI++L              E+ + D     +  E                        
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
           +R+ HRDLKP+N+L     +L   K+ DF L        +   P+      T     E +
Sbjct: 119 RRVLHRDLKPQNLLINREGEL---KIADFGLAR------AFGIPVRK---YTH----EIV 162

Query: 185 -----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                AP++    MG  +  Y    D+WS+G +   ++ G P F G    D
Sbjct: 163 TLWYRAPDV---LMG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 48/204 (23%), Positives = 70/204 (34%), Gaps = 51/204 (25%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H          Q  I HRDLKP N+L      L   KL DF L        S  SP   
Sbjct: 128 LH----------QHWILHRDLKPNNLLLDENGVL---KLADFGLA------KSFGSPNRA 168

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
               T     + +     APE+     G  A  Y    D+W++G ++  LL   P   G+
Sbjct: 169 ---YTH----QVVTRWYRAPEL---LFG--ARMYGVGVDMWAVGCILAELLLRVPFLPGD 216

Query: 354 CGEDCGWQRGETCHAC----QEI--------LFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
              D   Q            +E          + + +          +S   D+  DLI+
Sbjct: 217 SDLD---QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQ 273

Query: 402 RLLVKDARKRLSAASVLKHPWIST 425
            L + +   R++A   LK  + S 
Sbjct: 274 GLFLFNPCARITATQALKMKYFSN 297

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 57/230 (24%), Positives = 84/230 (36%), Gaps = 74/230 (32%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR------VFKEVETFHHCQGH 105
           K + LG+G +A+V    +  T    A+K I KL   S ++        +E++       H
Sbjct: 14  KLDFLGEGQFATVYKARDKNTNQIVAIKKI-KLGHRSEAKDGINRTALREIKLLQELS-H 71

Query: 106 PNIIQLL-------------EYYEDD-----ENHER---------------------HK- 125
           PNII LL             ++ E D     +++                       H+ 
Sbjct: 72  PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM- 184
            I HRDLKP N+L      L   KL DF L        S  SP       T     + + 
Sbjct: 132 WILHRDLKPNNLLLDENGVL---KLADFGLA------KSFGSPNRA---YTH----QVVT 175

Query: 185 ----APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
               APE+     G  A  Y    D+W++G ++  LL   P   G+   D
Sbjct: 176 RWYRAPEL---LFG--ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 55/230 (23%), Positives = 83/230 (36%), Gaps = 58/230 (25%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG--SGIKFNTSVHSPL 296
            H             + HRDLKP+NIL     Q+   KL DF L                
Sbjct: 136 LH----------SHRVVHRDLKPQNILVTSSGQI---KLADFGLARIYSF---------- 172

Query: 297 ATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
              + LT  V +  + APE+    +    S Y    DLWS+G +   +    P F G+  
Sbjct: 173 --QMALTSVVVTLWYRAPEV---LLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224

Query: 356 EDCGWQRGETCHAC----QEIL--FHSIQQGHYDFP-------EGEWSTISDEAKDLIRR 402
            D   Q G+         +E      ++      F        E   + I +  KDL+ +
Sbjct: 225 VD---QLGKILDVIGLPGEEDWPRDVALP--RQAFHSKSAQPIEKFVTDIDELGKDLLLK 279

Query: 403 LLVKDARKRLSAASVLKHPWISTAG--TAHRPLVTPQVIRRNQSARELSS 450
            L  +  KR+SA S L HP+         +     P     +Q+  EL++
Sbjct: 280 CLTFNPAKRISAYSALSHPYFQDLERCKENLDSHLPP----SQNTSELNT 325

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 26/113 (23%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG--SGIKFNTSVHSPLATPLLLTP- 177
           H    R+ HRDLKP+NIL     Q+   KL DF L                   + LT  
Sbjct: 137 HSH--RVVHRDLKPQNILVTSSGQI---KLADFGLARIYSF------------QMALTSV 179

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           V +  + APE+    +    S Y    DLWS+G +   +    P F G+   D
Sbjct: 180 VVTLWYRAPEV---LLQ---SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 48/198 (24%), Positives = 72/198 (36%), Gaps = 48/198 (24%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H             I HRDLKPENIL      +   KL DF L              + 
Sbjct: 136 LH----------ANCIVHRDLKPENILVTSGGTV---KLADFGLAR----------IYSY 172

Query: 299 PLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
            + LTP V +  + APE+    +    S Y    D+WS+G +   +    P F GN   D
Sbjct: 173 QMALTPVVVTLWYRAPEV---LLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226

Query: 358 CGWQRGETCHAC----QEIL--FHSIQQGHYDFP-------EGEWSTISDEAKDLIRRLL 404
              Q G+         ++      S+      FP       +     + +    L+  +L
Sbjct: 227 ---QLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEML 281

Query: 405 VKDARKRLSAASVLKHPW 422
             +  KR+SA   L+H +
Sbjct: 282 TFNPHKRISAFRALQHSY 299

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 22/111 (19%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VG 179
           H     I HRDLKPENIL      +   KL DF L              +  + LTP V 
Sbjct: 137 HAN--CIVHRDLKPENILVTSGGTV---KLADFGLA----------RIYSYQMALTPVVV 181

Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +  + APE+    +    S Y    D+WS+G +   +    P F GN   D
Sbjct: 182 TLWYRAPEV---LLQ---STYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 60.2 bits (147), Expect = 3e-10
 Identities = 43/203 (21%), Positives = 71/203 (34%), Gaps = 53/203 (26%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           CH           + + HRDLKP+N+L     +L   KL +F L        +   P+  
Sbjct: 117 CH----------SRNVLHRDLKPQNLLINRNGEL---KLANFGLAR------AFGIPVRC 157

Query: 299 PLLLTPVGSAEFM-----APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
               +     E +      P++     G  A  Y    D+WS G +   +   G P F G
Sbjct: 158 ---YSA----EVVTLWYRPPDV---LFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPG 205

Query: 353 NCGEDCGWQRGETCHAC----QEI--------LFHSIQQGHYDFP-EGEWSTISDEAKDL 399
           N  +D   Q            +E          +                  ++   +DL
Sbjct: 206 NDVDD---QLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262

Query: 400 IRRLLVKDARKRLSAASVLKHPW 422
           ++ LL  +  +R+SA   L+HP+
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPY 285

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 44.0 bits (105), Expect = 6e-05
 Identities = 48/231 (20%), Positives = 80/231 (34%), Gaps = 78/231 (33%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKII------DKLPGHSRSRVFKEVETFHHCQGH 105
           K E +G+G Y +V    N  T    A+K +      + +P    S   +E+      + H
Sbjct: 6   KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP----SSALREICLLKELK-H 60

Query: 106 PNIIQLL-------------EYYEDD-----ENHER----------------------HK 125
            NI++L              E+ + D     ++                          +
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM- 184
            + HRDLKP+N+L     +L   KL +F L        +   P+      +     E + 
Sbjct: 121 NVLHRDLKPQNLLINRNGEL---KLANFGLAR------AFGIPVRC---YSA----EVVT 164

Query: 185 ----APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
                P++     G  A  Y    D+WS G +   +   G P F GN  +D
Sbjct: 165 LWYRPPDV---LFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 60.7 bits (148), Expect = 3e-10
 Identities = 42/198 (21%), Positives = 65/198 (32%), Gaps = 45/198 (22%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT----PVG 306
           +  I HRD+K  N+L      L   KL DF L        +      T  ++T    P  
Sbjct: 142 RNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP-- 196

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------C 358
                 PE+    +G     Y    DLW  G ++  +    P   GN  +         C
Sbjct: 197 ------PEL---LLG--ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 245

Query: 359 G------WQRGETCHACQEILFHSIQQGHYD-----FPEGEWSTISDEAKDLIRRLLVKD 407
           G      W   +     +++      +G                    A DLI +LLV D
Sbjct: 246 GSITPEVWPNVDNYELYEKLEL---VKGQKRKVKDRLK---AYVRDPYALDLIDKLLVLD 299

Query: 408 ARKRLSAASVLKHPWIST 425
             +R+ +   L H +  +
Sbjct: 300 PAQRIDSDDALNHDFFWS 317

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.1 bits (105), Expect = 7e-05
 Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 22/110 (20%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT---- 176
           H    +I HRD+K  N+L      L   KL DF L        +      T  ++T    
Sbjct: 141 HRN--KILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 195

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           P        PE+    +G     Y    DLW  G ++  +    P   GN
Sbjct: 196 P--------PEL---LLG--ERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 53/227 (23%), Positives = 78/227 (34%), Gaps = 60/227 (26%)

Query: 248 HSIQQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
           H+    + HRDLKP NIL      +   VK+ D        FN    SPL     L PV 
Sbjct: 145 HA--NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR--LFN----SPLKPLADLDPV- 195

Query: 307 SAEFM------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW 360
               +      APE+    +G  A  Y K  D+W++G +   LL   P F+    ED   
Sbjct: 196 ----VVTFWYRAPEL---LLG--ARHYTKAIDIWAIGCIFAELLTSEPIFHCR-QEDIKT 245

Query: 361 QRGETCHACQEI-----------------------LFHSIQQGHY------DFPEGEWST 391
                      I                       L    ++  Y       + E     
Sbjct: 246 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVK 305

Query: 392 ISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQV 438
              +A  L+++LL  D  KR+++   ++ P+         PL T  V
Sbjct: 306 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED-----PLPTSDV 347

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 58/240 (24%), Positives = 85/240 (35%), Gaps = 78/240 (32%)

Query: 46  QDLYRLKGEILGKGAYASV--QTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ 103
           +DL+  +G  +G+G Y  V      +   + +YA+K I+   G S S   +E+      +
Sbjct: 19  EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-GISMSAC-REIALLRELK 76

Query: 104 GHPNIIQLL---------------EYYEDD-----ENHER-------------------- 123
            HPN+I L                +Y E D     + H                      
Sbjct: 77  -HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLY 135

Query: 124 ----------HKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
                        + HRDLKP NIL      +   VK+ D        FN    SPL   
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR--LFN----SPLKPL 189

Query: 173 LLLTPVGSAEFM------APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             L PV     +      APE+    +G  A  Y K  D+W++G +   LL   P F+  
Sbjct: 190 ADLDPV-----VVTFWYRAPEL---LLG--ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 19/165 (11%), Positives = 35/165 (21%), Gaps = 56/165 (33%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           + G+A     P  +                                     ++  G    
Sbjct: 147 RAGVALSIDHPSRVR------------------------------------VSIDGDVVL 170

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
             P    A M       + + D+  +G  +Y LL    P                  +  
Sbjct: 171 AYP----ATMPDA----NPQDDIRGIGASLYALLVNRWPL-----------PEAGVRSGL 211

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
                    G    P      I  +   +  R +  D   R ++ 
Sbjct: 212 APAERDT-AGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSAST 255

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 23/225 (10%), Positives = 44/225 (19%), Gaps = 93/225 (41%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKE---VETFHHCQ-G 104
           YRL     G          ++   + + A+  +D  P         +     T    +  
Sbjct: 33  YRL-LIFHGGVPPLQFWQALDTALDRQVALTFVD--PQGVLPDDVLQETLSRTLRLSRID 89

Query: 105 HPNIIQLLEYYEDDEN----------------------------------------HERH 124
            P + ++L+                                               H   
Sbjct: 90  KPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAG 149

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             +A     P  +                                     ++  G     
Sbjct: 150 --VALSIDHPSRVR------------------------------------VSIDGDVVLA 171

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
            P    A M       + + D+  +G  +Y LL    P       
Sbjct: 172 YP----ATMPDA----NPQDDIRGIGASLYALLVNRWPLPEAGVR 208

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 45/217 (20%), Positives = 79/217 (36%), Gaps = 54/217 (24%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKI-IDKLPGHSRSRVFKEVETFHHCQGHPN 107
           +R+ G+ +G G +  ++   N+ T    A+K+   K         ++  +      G P 
Sbjct: 11  FRV-GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69

Query: 108 I-------------IQL----LEYYEDDEN----------------------HERHKRIA 128
           +             ++L    LE   D  +                      H ++  + 
Sbjct: 70  VYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN--LI 127

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF---NTSVHSPLATPLLLTPVGSAEFMA 185
           +RD+KPEN L   P   +   +   D     ++    T  H P      LT  G+A +M+
Sbjct: 128 YRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT--GTARYMS 185

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
              +N  +G E S   +R DL +LG +    L G  P
Sbjct: 186 ---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLP 216

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 47.8 bits (114), Expect = 5e-06
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 13/106 (12%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF---NTSVHSPLATPLLLT 303
            HS  + + +RD+KPEN L   P   +   +   D     ++    T  H P      LT
Sbjct: 121 VHS--KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT 178

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
             G+A +M+   +N  +G E S   +R DL +LG +    L G  P
Sbjct: 179 --GTARYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLP 216

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 54.0 bits (130), Expect = 5e-08
 Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 31/159 (19%)

Query: 73  ELEYAVKIIDKLPGHSRSRVFKEVETFHH-------CQGHPNIIQLLEYYEDDENHERHK 125
              Y   ++++L G    ++  +  TF          +    ++ +LEY      HE   
Sbjct: 123 GRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIR----MLDVLEYI-----HENE- 171

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSAEFM 184
              H D+K  N+L +       V L D+ L                        G+ EF 
Sbjct: 172 -YVHGDIKAANLL-LGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHN--GTIEFT 227

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPP 222
           +   ++A  G   S   +R D+  LG  ++   LCG  P
Sbjct: 228 S---LDAHKGVALS---RRSDVEILGYCMLR-WLCGKLP 259

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVG 306
           H       H D+K  N+L +       V L D+ L                        G
Sbjct: 168 HE--NEYVHGDIKAANLL-LGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHN--G 222

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPP 349
           + EF +   ++A  G   S   +R D+  LG  ++   LCG  P
Sbjct: 223 TIEFTS---LDAHKGVALS---RRSDVEILGYCMLR-WLCGKLP 259

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 19/117 (16%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF-NTSVH 166
           ++  LE+      HE      H ++  ENI  V P+  S V L  +      ++  +  H
Sbjct: 168 LLDALEFL-----HENE--YVHGNVTAENIF-VDPEDQSQVTLAGYGFAF--RYCPSGKH 217

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPP 222
                       G  EF++   ++   G   S   +R DL SLG  ++   L G+ P
Sbjct: 218 VAYVEGSRSPHEGDLEFIS---MDLHKGCGPS---RRSDLQSLGYCMLK-WLYGFLP 267

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 50.1 bits (120), Expect = 8e-07
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF-NTSVHSPLATPLLLTPVG 306
           H       H ++  ENI  V P+  S V L  +      ++  +  H            G
Sbjct: 176 HE--NEYVHGNVTAENIF-VDPEDQSQVTLAGYGFAF--RYCPSGKHVAYVEGSRSPHEG 230

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPP 349
             EF++   ++   G   S   +R DL SLG  ++   L G+ P
Sbjct: 231 DLEFIS---MDLHKGCGPS---RRSDLQSLGYCMLK-WLYGFLP 267

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 19/117 (16%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFNTSVH 166
           I+ +LEY      HE      H D+K  N+L ++      V L D+ L            
Sbjct: 161 ILDILEYI-----HEHE--YVHGDIKASNLL-LNYKNPDQVYLVDYGLAYRYCPEGVHKA 212

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPP 222
                       G+ EF +   ++A  G   S   +R DL  LG  ++   L G+ P
Sbjct: 213 YAADPKRCHD--GTIEFTS---IDAHNGVAPS---RRGDLEILGYCMIQ-WLTGHLP 260

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 50.2 bits (120), Expect = 9e-07
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 14/104 (13%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVG 306
           H       H D+K  N+L ++      V L D+ L                        G
Sbjct: 169 HE--HEYVHGDIKASNLL-LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHD--G 223

Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPP 349
           + EF +   ++A  G   S   +R DL  LG  ++   L G+ P
Sbjct: 224 TIEFTS---IDAHNGVAPS---RRGDLEILGYCMIQ-WLTGHLP 260

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 18/118 (15%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF---NTS 164
           ++  ++       HE+   + +RD+KP+N L   P+  +   +   D G    +    T 
Sbjct: 115 MLARVQSI-----HEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK 167

Query: 165 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
            H P      L+  G+A +M+   +N  +G E S   +R DL +LG V    L G  P
Sbjct: 168 QHIPYREKKNLS--GTARYMS---INTHLGREQS---RRDDLEALGHVFMYFLRGSLP 217

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 50.0 bits (120), Expect = 7e-07
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 13/106 (12%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF---NTSVHSPLATPLLLT 303
            H   + + +RD+KP+N L   P+  +   +   D G    +    T  H P      L+
Sbjct: 122 IHE--KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS 179

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
             G+A +M+   +N  +G E S   +R DL +LG V    L G  P
Sbjct: 180 --GTARYMS---INTHLGREQS---RRDDLEALGHVFMYFLRGSLP 217

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 19/111 (17%)

Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFNTSVH 166
           +I  +EY      H ++    HRD+KP+N L     + + V + DF L        T  H
Sbjct: 114 MISRIEYI-----HSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166

Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
            P      LT  G+A + +   +N  +G E S   +R DL SLG   Y+L+
Sbjct: 167 IPYRENKNLT--GTARYAS---INTHLGIEQS---RRDDLESLG---YVLM 206

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG-IKFNTSVHSPLATPLLLTPV 305
            HS  +   HRD+KP+N L     + + V + DF L        T  H P      LT  
Sbjct: 121 IHS--KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT-- 176

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
           G+A + +   +N  +G E S   +R DL SLG   Y+L+
Sbjct: 177 GTARYAS---INTHLGIEQS---RRDDLESLG---YVLM 206

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 51/219 (23%), Positives = 81/219 (36%), Gaps = 60/219 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
           +RL G  +G G++  +    NI T  E A+K+ +    H +  +  E + +   QG   I
Sbjct: 9   FRL-GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ--LLYESKIYRILQGGTGI 65

Query: 109 IQLLEYYEDDEN------------------------------------------HERHKR 126
             +  +  + +                                           H +   
Sbjct: 66  PNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS-- 123

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF---NTSVHSPLATPLLLTPVGSAEF 183
             HRD+KP+N L     + + V + DF  G   K+   +T  H P      LT  G+A +
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDF--GLAKKYRDTSTHQHIPYRENKNLT--GTARY 179

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
            +   VN  +G E S   +R DL SLG V+   L G  P
Sbjct: 180 AS---VNTHLGIEQS---RRDDLESLGYVLMYFLRGSLP 212

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 15/106 (14%)

Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF---NTSVHSPLATPLLLT 303
            HS  +   HRD+KP+N L     + + V + DF  G   K+   +T  H P      LT
Sbjct: 119 VHS--KSFLHRDIKPDNFLMGLGRRANQVYIIDF--GLAKKYRDTSTHQHIPYRENKNLT 174

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
             G+A + +   VN  +G E S   +R DL SLG V+   L G  P
Sbjct: 175 --GTARYAS---VNTHLGIEQS---RRDDLESLGYVLMYFLRGSLP 212

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 48/274 (17%), Positives = 81/274 (29%), Gaps = 80/274 (29%)

Query: 52  KGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPGHSRSRVF-KEVETFHHCQGHP 106
               LGKG + SV+ C        T    AVK + +  G  + R F +E++         
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL-QHSGPDQQRDFQREIQILKALH-SD 84

Query: 107 NIIQ------------------------LLEYYEDDENHERHKR-------IA------- 128
            I++                        L ++ +         R       I        
Sbjct: 85  FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144

Query: 129 -----HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
                HRDL   NIL         VK+ DF L   +  +   +               + 
Sbjct: 145 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYY---------VVREPGQS 192

Query: 184 ----MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGET 238
                APE ++  +      + ++ D+WS GVV+Y +          +            
Sbjct: 193 PIFWYAPESLSDNI------FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 246

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQL 272
             A    L   +++G   R   P    C  P ++
Sbjct: 247 VPALSR-LLELLEEG--QRLPAPPA--C--PAEV 273

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 5e-05
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 31/140 (22%)

Query: 2   DFYGDSF--HHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKG 59
           D Y  S   HH      +  + ER+   R                F D   L+ +I    
Sbjct: 470 DQYFYSHIGHH----LKNIEHPERMTLFRMV--------------FLDFRFLEQKIRHDS 511

Query: 60  -AYASVQTCVNILTELE-YAVKIIDKLPGHSRSRVFKEVETF-----HHCQGHP--NIIQ 110
            A+ +  + +N L +L+ Y   I D  P     R+   +  F      +       ++++
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDP--KYERLVNAILDFLPKIEENLICSKYTDLLR 569

Query: 111 LLEYYEDDENHERHKRIAHR 130
           +    ED+   E   +   R
Sbjct: 570 IALMAEDEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 25/186 (13%), Positives = 57/186 (30%), Gaps = 33/186 (17%)

Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
           GE  +  ++IL         +F   +   + D  K ++ +  +           ++    
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNF---DCKDVQDMPKSILSKEEIDH---------IIMSK- 58

Query: 423 ISTAGTAHRPLVTPQVIRRNQSARELSSFAESAMSAN-RVILQHFSI-CKNP-------- 472
              A +    L        ++    +  F E  +  N + ++       + P        
Sbjct: 59  --DAVSGTLRLFW---TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 473 --KDEQWLATPTNMRLSPPSESLLVQRRQRLQSQSQSDNLASAGQCGNSASGSSVVNVQS 530
             +D  +       + +       ++ RQ L     + N+   G  G   SG + V +  
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG---SGKTWVALDV 170

Query: 531 LLAKLV 536
            L+  V
Sbjct: 171 CLSYKV 176

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 65/427 (15%), Positives = 119/427 (27%), Gaps = 133/427 (31%)

Query: 100 HHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKP--ENILCVH-PDQLSPV---KLCDF 153
           HH   H +       +E  E+  ++K I         +N  C    D    +   +  D 
Sbjct: 1   HHHHHHMD-------FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH 53

Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE--------ASGYDKRCD 205
            + S         +   T  L   + S +    E+V  F+            S       
Sbjct: 54  IIMSK-------DAVSGTLRLFWTLLSKQ---EEMVQKFVEEVLRINYKFLMSPIKTEQR 103

Query: 206 LWSLGVVVYI-----LLCGYPPF--YGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRD 258
             S+   +YI     L      F  Y               +  +   +  ++Q +   +
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKY---------------NVSRLQPYLKLRQAL--LE 146

Query: 259 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 318
           L+P   + +              LGSG K   +    +A  + L         + ++   
Sbjct: 147 LRPAKNVLIDGV-----------LGSG-K---TW---VALDVCL---------SYKVQCK 179

Query: 319 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ 378
                               + ++ L        NC         ET     + L + I 
Sbjct: 180 MDFK----------------IFWLNL-------KNCNSP------ETVLEMLQKLLYQID 210

Query: 379 QGHYDFPEGEWSTI--SDEAKDLIRRLLVKDARKR--LSAASVLKHPWISTAGTAH---- 430
                  +   +        +  +RRLL     +   L    VL +   + A  A     
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL----VLLNVQNAKAWNAFNLSC 266

Query: 431 RPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKD-EQWLATPTNMRLSP- 488
           + L+T     R +      +   SA +   + L H S+   P + +  L    + R    
Sbjct: 267 KILLTT----RFKQV----TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 489 PSESLLV 495
           P E L  
Sbjct: 319 PREVLTT 325

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 6e-04
 Identities = 72/568 (12%), Positives = 138/568 (24%), Gaps = 199/568 (35%)

Query: 1   MDF--------YGDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTS--CFQDLYR 50
           MDF        Y D             + + +++       K+    ++ S        R
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 51  LKGEILGKGAYASVQTCVNILTELEY-----AVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           L   +L K     VQ  V  +  + Y      +K   + P        ++ +  +     
Sbjct: 67  LFWTLLSKQE-EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY----- 120

Query: 106 PNIIQLLEYYEDDENHERHK-----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK 160
            N  Q+   Y    N  R +     R A  +L+P   + +              LGSG K
Sbjct: 121 -NDNQVFAKY----NVSRLQPYLKLRQALLELRPAKNVLIDG-----------VLGSG-K 163

Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
              +    +A  + L         + ++                       + ++ L   
Sbjct: 164 ---TW---VALDVCL---------SYKVQCKMDFK----------------IFWLNL--- 189

Query: 221 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF 280
                NC               + +L   + Q + ++ + P        D  S +KL   
Sbjct: 190 ----KNCNSP------------ETVL--EMLQKLLYQ-IDPN--WTSRSDHSSNIKLRIH 228

Query: 281 DLGSGIKFNTSVHSPLATPLL-LTPVGSAEFMAPEIVNAFMGPEASGYDKRC-------- 331
            + + ++       P    LL L  V +      +  NAF        +  C        
Sbjct: 229 SIQAELR-RLLKSKPYENCLLVLLNVQN-----AKAWNAF--------NLSCKILLTTRF 274

Query: 332 ----DLWSLGVVVYILL-------------------------------CGYPPFY-GNCG 355
               D  S     +I L                                   P       
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 356 ED-----CGWQR---------GETCHACQEILFHSIQQGHYD----FPEGE--------- 388
           E        W                +   +L  +  +  +D    FP            
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394

Query: 389 -WSTISDE-----AKDLIRRLLV----KDARKRLSAASVLKHPWISTAGTAHRPLVTPQV 438
            W  +           L +  LV    K++   + +  +     +      HR      +
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR-----SI 449

Query: 439 IRRNQSARELSSFAESAMSANRVILQHF 466
           +      +   S        ++    H 
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 41/220 (18%), Positives = 78/220 (35%), Gaps = 62/220 (28%)

Query: 52  KGEILGKGAYASVQTCV----NILTELEYAVKII-DKLPGHSRSRVFKEVETFHHCQGHP 106
           K ++LG GA+ +V   +        ++  A+K + +     +   +  E         +P
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NP 77

Query: 107 NIIQLL------------EYYE----DD--ENHERH----------------------KR 126
           ++ +LL            +        D    H+ +                      +R
Sbjct: 78  HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRDL   N+L   P     VK+ DF L   +      +      +   P+   ++MA 
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKV---PI---KWMAL 188

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
           E +   +      Y  + D+WS GV V+ ++  G  P+ G
Sbjct: 189 ESILHRI------YTHQSDVWSYGVTVWELMTFGSKPYDG 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	539
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.98
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.98
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.98
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.83
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.82
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.82
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.81
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.81
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.8
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.8
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.8
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.79
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.78
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.75
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.75
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.72
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.72
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.72
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.71
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.71
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.71
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.7
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.66
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.59
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.59
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.58
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.58
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.58
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.58
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.58
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.57
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.57
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.57
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.57
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.57
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.57
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.57
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.56
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.56
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.56
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.55
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.55
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.54
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.54
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.53
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.53
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.53
3niz_A	311	Rhodanese family protein; structural genomics, str	99.53
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.53
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.52
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.52
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.52
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.52
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.52
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.52
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.52
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.52
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.51
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.51
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.51
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.51
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.51
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.51
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.51
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.5
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.5
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.5
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.5
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.5
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.5
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.49
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.49
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.49
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.49
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.49
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.49
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.49
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.49
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.49
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.48
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.48
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.48
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.48
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.48
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.48
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.48
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.48
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.48
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.48
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.48
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.47
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.47
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.47
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.47
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.47
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.47
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.47
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.47
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.47
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.47
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.47
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.47
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.46
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.46
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.46
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.46
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.46
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.46
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.46
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.46
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.46
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.45
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.45
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.45
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.45
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.45
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.45
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.45
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.45
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.45
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.45
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.45
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.45
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.44
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.44
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.44
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.44
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.44
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.44
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.44
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.44
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.43
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.43
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.42
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.42
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.42
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.42
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.42
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.41
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.41
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.41
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.41
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.41
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.41
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.41
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.41
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.41
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.41
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.41
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.41
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.41
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.4
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.4
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.4
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.4
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.4
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.4
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.4
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.4
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.4
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.39
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.39
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.39
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.39
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.39
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.39
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.39
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.39
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.38
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.38
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.38
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.38
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.38
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.38
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.37
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.37
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.37
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.37
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.37
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.37
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.37
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.37
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.36
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.36
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.36
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.36
3bhy_A	283	Death-associated protein kinase 3; death associate	99.36
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.36
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.36
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.36
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.35
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.35
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.35
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.35
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.35
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.35
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.35
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.35
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.35
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.35
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.35
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.35
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.35
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.35
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.35
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.35
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.34
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.34
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.34
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.34
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.34
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.34
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.33
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.33
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.33
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.33
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.33
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.33
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.33
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.33
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.33
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.32
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.32
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.32
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.31
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.31
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.31
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.31
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.31
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.3
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.3
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.3
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.3
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.3
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.3
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.29
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.29
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.29
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.29
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.29
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.29
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.29
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.28
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.26
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.26
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.24
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.23

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.5e-57  Score=457.33  Aligned_cols=261  Identities=29%  Similarity=0.490  Sum_probs=202.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||+||+|+++.+|+.||||+|++.   .......+.+|+++|..+ +|||||+++++|++....+ 
T Consensus        32 ~dy~i-~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~y-  108 (311)
T 4aw0_A           32 EDFKF-GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLY-  108 (311)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             cccEE-EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEE-
Confidence            45776 68899999999999999999999999999753   223456789999999987 6999999999999876654 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+.....+..+..              
T Consensus       109 --iv------mEy~~-----------------g-G--------------~L~~~i~~~~~l~e~~~--------------  134 (311)
T 4aw0_A          109 --FG------LSYAK-----------------N-G--------------ELLKYIRKIGSFDETCT--------------  134 (311)
T ss_dssp             --EE------ECCCT-----------------T-E--------------EHHHHHHHHSSCCHHHH--------------
T ss_pred             --EE------EecCC-----------------C-C--------------CHHHHHHHcCCCCHHHH--------------
Confidence              22      23221                 1 0              11111100000010000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..|++|   ++.|+.|+|  ++|||||||||||||++   ..+.+||+|||+|
T Consensus       135 ---------------------------~~~~~q---i~~al~ylH--~~~IiHRDlKPeNILl~---~~g~vKl~DFGla  179 (311)
T 4aw0_A          135 ---------------------------RFYTAE---IVSALEYLH--GKGIIHRDLKPENILLN---EDMHIQITDFGTA  179 (311)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--HCCCccCCCCHHHeEEc---CCCCEEEEEcCCc
Confidence                                       115556   788889999  99999999999999994   4567999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+.....      .....+.||||.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       180 ~~~~~~~~------~~~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~---------  238 (311)
T 4aw0_A          180 KVLSPESK------QARANSFVGTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGN---------  238 (311)
T ss_dssp             EECCTTTT------CCCBCCCCSCGGGCCHHHHHH------SCBCHHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             eecCCCCC------cccccCcccCcccCCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---------
Confidence            86543221      123568899999999999974      579999999999999999999999998754         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHH------HhcCCCccCCCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS------VLKHPWISTAGTAH  430 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e------~l~Hpw~~~~~~~~  430 (539)
                            ...++.+|..+.+.+|.    .+|++++|||++||++||++|+|++|      +++||||.+.+|..
T Consensus       239 ------~~~~~~~i~~~~~~~p~----~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~  301 (311)
T 4aw0_A          239 ------EGLIFAKIIKLEYDFPE----KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN  301 (311)
T ss_dssp             ------HHHHHHHHHHTCCCCCT----TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             ------HHHHHHHHHcCCCCCCc----ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHH
Confidence                  34578889999999885    68999999999999999999999988      58999999887753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7e-56  Score=451.69  Aligned_cols=259  Identities=27%  Similarity=0.388  Sum_probs=195.9

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||+||+|+++.+|+.||||+|++......+.+.+|+++|+.+ +|||||+++++|++....+   
T Consensus        73 ~~~y~~-~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~---  147 (346)
T 4fih_A           73 RSYLDN-FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW---  147 (346)
T ss_dssp             GGTEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEE---
T ss_pred             hHhcEE-eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE---
Confidence            445665 46799999999999999999999999999765555567789999999997 5999999999998876554   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.... +..+.+                
T Consensus       148 iv------mEy~~-----------------g-g--------------~L~~~l~~~~-l~e~~~----------------  172 (346)
T 4fih_A          148 VV------MEFLE-----------------G-G--------------ALTDIVTHTR-MNEEQI----------------  172 (346)
T ss_dssp             EE------ECCCT-----------------T-E--------------EHHHHHHHSC-CCHHHH----------------
T ss_pred             EE------EeCCC-----------------C-C--------------cHHHHHHcCC-CCHHHH----------------
Confidence            22      22221                 0 0              0100000000 000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                               ..|.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+|||+|+.
T Consensus       173 -------------------------~~~~~q---i~~aL~ylH--~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~~  219 (346)
T 4fih_A          173 -------------------------AAVCLA---VLQALSVLH--AQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ  219 (346)
T ss_dssp             -------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             -------------------------HHHHHH---HHHHHHHHH--HCCcccccCCHHHEEEC---CCCCEEEecCcCcee
Confidence                                     014455   778888998  99999999999999994   446799999999986


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +....        ....+.|||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+           
T Consensus       220 ~~~~~--------~~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----------  274 (346)
T 4fih_A          220 VSKEV--------PRRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----------  274 (346)
T ss_dssp             CCSSS--------CCBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------
T ss_pred             cCCCC--------CcccccccCcCcCCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----------
Confidence            54322        13457899999999999963      579999999999999999999999998754           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                          ...++..|..+.. .....|..+|++++|||.+||++||++|||++|+|+||||+...
T Consensus       275 ----~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          275 ----PLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             ----HHHHHHHHHHSSC-CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             ----HHHHHHHHHcCCC-CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence                2345666665432 22234678999999999999999999999999999999998654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.7e-55  Score=433.80  Aligned_cols=252  Identities=28%  Similarity=0.513  Sum_probs=180.5

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||+||+|+++.+|+.||||++++..   .....++.+|+++|+.+ +|||||+++++|++....+ 
T Consensus        13 g~Y~i-~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~-   89 (275)
T 3hyh_A           13 GNYQI-VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEII-   89 (275)
T ss_dssp             -CCEE-EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE-
T ss_pred             eCeEE-EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEE-
Confidence            35776 578999999999999999999999999997542   23356789999999997 5999999999998876544 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +                 +|. + +              .++..+....-++.+..              
T Consensus        90 --iv------m-----------------Ey~-~-g--------------~L~~~l~~~~~l~e~~~--------------  114 (275)
T 3hyh_A           90 --MV------I-----------------EYA-G-N--------------ELFDYIVQRDKMSEQEA--------------  114 (275)
T ss_dssp             --EE------E-----------------ECC-C-E--------------EHHHHHHHSCSCCHHHH--------------
T ss_pred             --EE------E-----------------eCC-C-C--------------CHHHHHHHcCCCCHHHH--------------
Confidence              12      1                 221 0 1              01000000000010000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..|.+|   ++.|+.|+|  ++||+||||||+|||++   ..+.+||+|||+|
T Consensus       115 ---------------------------~~~~~q---i~~al~ylH--~~~IiHRDiKP~NILl~---~~~~vkl~DFGla  159 (275)
T 3hyh_A          115 ---------------------------RRFFQQ---IISAVEYCH--RHKIVHRDLKPENLLLD---EHLNVKIADFGLS  159 (275)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTCCCCCCCTTTEEEC---TTCCEEECCSSCC
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--HCCcccccCChHHeEEC---CCCCEEEeecCCC
Confidence                                       014555   778889988  99999999999999994   4467999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCC-CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY-DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y-~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......         ...+.|||+.|||||++.+      ..| +.++|||||||++|+|++|++||.+.+        
T Consensus       160 ~~~~~~~---------~~~~~~GT~~Y~APE~~~~------~~y~~~~~DiwSlGvily~lltg~~PF~~~~--------  216 (275)
T 3hyh_A          160 NIMTDGN---------FLKTSCGSPNYAAPEVISG------KLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------  216 (275)
T ss_dssp             ------------------------CTTSCHHHHSS------SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------
T ss_pred             eecCCCC---------ccCCeeECcccCChhhhcC------CCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--------
Confidence            7543221         2357899999999999974      344 679999999999999999999998753        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                             ...++..|..+.+.+|.    .+|++++|||.+||++||++|||++|+|+||||+.
T Consensus       217 -------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          217 -------IPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             -------HHHHHHHHHHTCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             -------HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                   34578889999888874    68999999999999999999999999999999974

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.6e-54  Score=452.26  Aligned_cols=259  Identities=27%  Similarity=0.382  Sum_probs=195.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||+||+|+++.+|+.||||+|++......+.+.+|+++|+.+ +|||||+++++|+++...+   
T Consensus       150 ~~~y~~-~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~---  224 (423)
T 4fie_A          150 RSYLDN-FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW---  224 (423)
T ss_dssp             GGTEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE---
T ss_pred             hHhcEe-eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEE---
Confidence            345665 46799999999999999999999999999876555667789999999997 5999999999998876544   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-                 + +              .+...+.. .-+..+.+                
T Consensus       225 iV------mEy~~-----------------g-G--------------~L~~~i~~-~~l~e~~~----------------  249 (423)
T 4fie_A          225 VV------MEFLE-----------------G-G--------------ALTDIVTH-TRMNEEQI----------------  249 (423)
T ss_dssp             EE------EECCT-----------------T-E--------------EHHHHHHH-SCCCHHHH----------------
T ss_pred             EE------EeCCC-----------------C-C--------------cHHHHHhc-cCCCHHHH----------------
Confidence            22      22211                 1 0              01000000 00000000                


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                                               ..|.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+|||+|+.
T Consensus       250 -------------------------~~~~~q---il~aL~ylH--~~~IiHRDiKp~NILl~---~~g~vKl~DFGla~~  296 (423)
T 4fie_A          250 -------------------------AAVCLA---VLQALSVLH--AQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQ  296 (423)
T ss_dssp             -------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSTTTEEEC---TTCCEEECCCTTCEE
T ss_pred             -------------------------HHHHHH---HHHHHHHHH--HCCeecccCCHHHEEEc---CCCCEEEecCccceE
Confidence                                     014445   778888988  99999999999999995   446799999999986


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +....        ....+.|||++|||||++.+      ..|+.++|||||||++|+|++|++||.+.+           
T Consensus       297 ~~~~~--------~~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----------  351 (423)
T 4fie_A          297 VSKEV--------PRRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----------  351 (423)
T ss_dssp             CCSSC--------CCBCCCEECTTTCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------
T ss_pred             CCCCC--------ccccccccCcCcCCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----------
Confidence            54322        13457899999999999963      579999999999999999999999998754           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                          ...++..|..+.. .....|..+|++++|||.+||++||++|+|++|+|+||||+...
T Consensus       352 ----~~~~~~~i~~~~~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          352 ----PLKAMKMIRDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             ----HHHHHHHHHHSCC-CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             ----HHHHHHHHHcCCC-CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence                2345566665432 22234678999999999999999999999999999999998654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.2e-54  Score=443.28  Aligned_cols=256  Identities=23%  Similarity=0.359  Sum_probs=187.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||+||+|+++.+|+.||||+|++...  ....++.+|+++|.++ +|||||+++++|++....+  
T Consensus        24 e~Y~~-~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~y--   99 (350)
T 4b9d_A           24 EKYVR-LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLY--   99 (350)
T ss_dssp             CCEEE-EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE--
T ss_pred             cceEE-eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEE--
Confidence            46776 5789999999999999999999999999976432  2346788999999997 5999999999998776544  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                       .|      +|.+-                 + +              .|...+... ...-+|..              
T Consensus       100 -iV------mEy~~-----------------g-g--------------~L~~~i~~~~~~~~~e~~--------------  126 (350)
T 4b9d_A          100 -IV------MDYCE-----------------G-G--------------DLFKRINAQKGVLFQEDQ--------------  126 (350)
T ss_dssp             -EE------EECCT-----------------T-C--------------BHHHHHHHTTTCCCCHHH--------------
T ss_pred             -EE------EeCCC-----------------C-C--------------cHHHHHHHcCCCCCCHHH--------------
Confidence             12      22111                 1 0              111111000 00001100              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                ...|.+|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+|
T Consensus       127 --------------------------~~~~~~q---i~~aL~ylH--~~~IiHRDlKp~NILl~---~~g~vKl~DFGla  172 (350)
T 4b9d_A          127 --------------------------ILDWFVQ---ICLALKHVH--DRKILHRDIKSQNIFLT---KDGTVQLGDFGIA  172 (350)
T ss_dssp             --------------------------HHHHHHH---HHHHHHHHH--HTTCEETTCCGGGEEEC---TTCCEEECSTTEE
T ss_pred             --------------------------HHHHHHH---HHHHHHHHH--HCCeeeccCCHHHEEEC---CCCCEEEcccccc
Confidence                                      0014555   778888988  99999999999999994   4467999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+....        ....+.|||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       173 ~~~~~~~--------~~~~~~~GT~~YmAPE~l~~------~~y~~~~DiwSlGvilyemltG~~PF~~~~---------  229 (350)
T 4b9d_A          173 RVLNSTV--------ELARACIGTPYYLSPEICEN------KPYNNKSDIWALGCVLYELCTLKHAFEAGS---------  229 (350)
T ss_dssp             SCCCHHH--------HHHHHHHSCCTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---------
T ss_pred             eeecCCc--------ccccccCCCccccCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---------
Confidence            8653221        12346799999999999963      579999999999999999999999998764         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                            ...++.+|..+.+..   .+..+|++++|||.+||++||++|||++|+|+||||+.
T Consensus       230 ------~~~~~~~i~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          230 ------MKNLVLKIISGSFPP---VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             ------HHHHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             ------HHHHHHHHHcCCCCC---CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence                  344677787776532   24578999999999999999999999999999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.5e-54  Score=435.27  Aligned_cols=257  Identities=29%  Similarity=0.431  Sum_probs=187.4

Q ss_pred             chhcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      +.|++ .+.||+|+||+||+|++.   .+++.||||++++..  .....++.+|+++|.++ +|||||+++++|+++...
T Consensus        24 ~~Y~i-~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~  101 (304)
T 3ubd_A           24 SQFEL-LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKL  101 (304)
T ss_dssp             GGEEE-EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEE
T ss_pred             cccEE-EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence            45776 578999999999999984   467899999997532  12234678899999886 699999999999887655


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|      +|.+-                 + +              .+...+.....++.+.+            
T Consensus       102 ~---iv------mEy~~-----------------g-g--------------~L~~~l~~~~~l~e~~~------------  128 (304)
T 3ubd_A          102 Y---LI------LDFLR-----------------G-G--------------DLFTRLSKEVMFTEEDV------------  128 (304)
T ss_dssp             E---EE------ECCCT-----------------T-C--------------EEHHHHHHHCCCCHHHH------------
T ss_pred             E---EE------EEcCC-----------------C-C--------------CHHHHHHhcCCCCHHHH------------
Confidence            4   22      22221                 1 0              11111100000010000            


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                                   ..+.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+|||
T Consensus       129 -----------------------------~~~~~q---i~~aL~ylH--~~~IiHRDlKp~NILl~---~~g~vKl~DFG  171 (304)
T 3ubd_A          129 -----------------------------KFYLAE---LALALDHLH--SLGIIYRDLKPENILLD---EEGHIKLTDFG  171 (304)
T ss_dssp             -----------------------------HHHHHH---HHHHHHHHH--HTTCCCSSCCGGGEEEC---TTSCEEEESSE
T ss_pred             -----------------------------HHHHHH---HHHHHHHHH--HCCCcCCCCCHHHeEEc---CCCCEEecccc
Confidence                                         014455   778888888  99999999999999994   45679999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +|+......        ....+.|||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+       
T Consensus       172 la~~~~~~~--------~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyemltG~~PF~~~~-------  230 (304)
T 3ubd_A          172 LSKESIDHE--------KKAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGKD-------  230 (304)
T ss_dssp             EEEC-------------CCCCSCCCCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------
T ss_pred             cceeccCCC--------ccccccccCcccCCHHHhcc------CCCCCCCcccchHHHHHHHHhCCCCCCCcC-------
Confidence            997543222        12457899999999999973      579999999999999999999999998764       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-----HHHhcCCCccCCCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTAGT  428 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-----~e~l~Hpw~~~~~~  428 (539)
                              ...++..|.++.+.+|.    .+|++++|||++||++||++||||     +|+|+||||++.+|
T Consensus       231 --------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          231 --------RKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             --------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             --------HHHHHHHHHcCCCCCCC----cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCH
Confidence                    34577888888888874    689999999999999999999984     79999999987654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-52  Score=435.24  Aligned_cols=272  Identities=24%  Similarity=0.325  Sum_probs=188.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.|++ .+.||+|+||+||+|+++.+|+.||||+|++....  ...++.+|+++|+++ +|||||++++++.....+.
T Consensus        52 i~~~Y~~-~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~  129 (398)
T 4b99_A           52 VGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYG  129 (398)
T ss_dssp             CCSSEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTT
T ss_pred             CCCCeEE-EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccc
Confidence            4467886 57899999999999999999999999999754332  235678999999997 5999999999987643221


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ..          .++.+          +.+|.  .+              .++..+.....+..+.+             
T Consensus       130 ~~----------~~~~i----------vmE~~--~g--------------~L~~~i~~~~~l~~~~~-------------  160 (398)
T 4b99_A          130 EF----------KSVYV----------VLDLM--ES--------------DLHQIIHSSQPLTLEHV-------------  160 (398)
T ss_dssp             TC----------CCEEE----------EEECC--SE--------------EHHHHHTSSSCCCHHHH-------------
T ss_pred             cC----------CEEEE----------EEeCC--CC--------------CHHHHHHhcCCCCHHHH-------------
Confidence            10          11111          12221  00              01011100000111101             


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                  ..|.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+|||+
T Consensus       161 ----------------------------~~~~~q---il~al~ylH--~~~iiHRDlKP~NIl~~---~~~~~Ki~DFGl  204 (398)
T 4b99_A          161 ----------------------------RYFLYQ---LLRGLKYMH--SAQVIHRDLKPSNLLVN---ENCELKIGDFGM  204 (398)
T ss_dssp             ----------------------------HHHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTCCEEECCCTT
T ss_pred             ----------------------------HHHHHH---HHHHHHHHH--HCcCcCCCcCccccccC---CCCCEEEeecce
Confidence                                        014455   778888988  99999999999999994   456799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |+.+......    ......+.|||++|||||++.+     ...|+.++||||+|||+|+|++|++||.+.+..+     
T Consensus       205 a~~~~~~~~~----~~~~~~~~~GT~~Y~APEv~~~-----~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-----  270 (398)
T 4b99_A          205 ARGLCTSPAE----HQYFMTEYVATRWYRAPELMLS-----LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-----  270 (398)
T ss_dssp             CBCC-----------CCCCCSSCCCCTTCCHHHHTT-----CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-----
T ss_pred             eeecccCccc----cccccccceeChHhcCHHHhcC-----CCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-----
Confidence            9865332111    1123467899999999999864     2468999999999999999999999999875321     


Q ss_pred             CccchhhHHHHHHHHhcCCCC--------------------CC---CC----CCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        363 GETCHACQEILFHSIQQGHYD--------------------FP---EG----EWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~--------------------~p---~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                                .+..|......                    +|   ..    .++.+|++++|||++||++||++||||+
T Consensus       271 ----------~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~  340 (398)
T 4b99_A          271 ----------QLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA  340 (398)
T ss_dssp             ----------HHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             ----------HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHH
Confidence                      22333221111                    11   11    1346899999999999999999999999


Q ss_pred             HHhcCCCccCCC
Q psy16343        416 SVLKHPWISTAG  427 (539)
Q Consensus       416 e~l~Hpw~~~~~  427 (539)
                      |+|+||||+...
T Consensus       341 e~L~Hp~f~~~~  352 (398)
T 4b99_A          341 AALRHPFLAKYH  352 (398)
T ss_dssp             HHTTSGGGTTTC
T ss_pred             HHhcCHhhCcCC
Confidence            999999998654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-52  Score=419.56  Aligned_cols=254  Identities=22%  Similarity=0.362  Sum_probs=182.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||+||+|.++.++..||||++.+..  .....++.+|+++|.++ +|||||+++++|++.....        
T Consensus        31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~--------  101 (290)
T 3fpq_A           31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGK--------  101 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTE--------
T ss_pred             eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCC--------
Confidence            457999999999999999999999999996532  22345788999999997 5999999999987532110        


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                          .++.+          +.+|.-+ +              .+...+.....+..+.+                     
T Consensus       102 ----~~~~l----------vmEy~~g-g--------------~L~~~l~~~~~l~~~~~---------------------  131 (290)
T 3fpq_A          102 ----KCIVL----------VTELMTS-G--------------TLKTYLKRFKVMKIKVL---------------------  131 (290)
T ss_dssp             ----EEEEE----------EEECCCS-C--------------BHHHHHHHHSSCCHHHH---------------------
T ss_pred             ----cEEEE----------EEeCCCC-C--------------CHHHHHHhcCCCCHHHH---------------------
Confidence                00000          1122101 0              11110000000000000                     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                          ..|.+|   ++.|+.|+|  ++|  ||||||||+|||++.  ..+.+||+|||+|+....
T Consensus       132 --------------------~~~~~q---i~~aL~ylH--~~~~~IiHRDlKp~NILl~~--~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          132 --------------------RSWCRQ---ILKGLQFLH--TRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             --------------------HHHHHH---HHHHHHHHH--TSSSCCCCCCCCGGGEEESS--TTSCEEECCTTGGGGCCT
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCCCEEecccChhheeEEC--CCCCEEEEeCcCCEeCCC
Confidence                                014555   788899999  777  999999999999953  235799999999974321


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                                ....+.||||.|||||++.       ..|+.++|||||||++|+|++|++||.+...             
T Consensus       185 ----------~~~~~~~GTp~YmAPE~~~-------~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------------  234 (290)
T 3fpq_A          185 ----------SFAKAVIGTPEFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYPYSECQN-------------  234 (290)
T ss_dssp             ----------TSBEESCSSCCCCCGGGGG-------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------------
T ss_pred             ----------CccCCcccCccccCHHHcC-------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------------
Confidence                      1245789999999999985       2599999999999999999999999976431             


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                       ...++..+..+..  |...+..+++++++||.+||.+||++|||++|+|+||||+.
T Consensus       235 -~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          235 -AAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -HHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -HHHHHHHHHcCCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence             3456667766543  22233568999999999999999999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4e-52  Score=422.71  Aligned_cols=254  Identities=21%  Similarity=0.222  Sum_probs=181.6

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||+||+|+++.+|+.||||+|++...     ..+|+.+|..+ +|||||+++++|+++...+   .|     
T Consensus        63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~---iv-----  128 (336)
T 4g3f_A           63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGL-SSPRIVPLYGAVREGPWVN---IF-----  128 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEE---EE-----
T ss_pred             CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEE---EE-----
Confidence            4679999999999999999999999999975322     24799999887 5999999999998776544   12     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|.+-                 + +              .+...+.....++.+..                       
T Consensus       129 -mEy~~-----------------g-g--------------~L~~~l~~~~~l~e~~~-----------------------  152 (336)
T 4g3f_A          129 -MELLE-----------------G-G--------------SLGQLIKQMGCLPEDRA-----------------------  152 (336)
T ss_dssp             -ECCCT-----------------T-C--------------BHHHHHHHHSSCCHHHH-----------------------
T ss_pred             -EeccC-----------------C-C--------------cHHHHHHHcCCCCHHHH-----------------------
Confidence             22221                 1 0              11111100000111100                       


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                        ..|.+|   ++.++.|+|  ++|||||||||+|||++.++  ..+||+|||+|+.+......
T Consensus       153 ------------------~~~~~q---i~~aL~ylH--~~~IiHRDlKp~NILl~~~g--~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          153 ------------------LYYLGQ---ALEGLEYLH--TRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             ------------------HHHHHH---HHHHHHHHH--TTTEECSCCCGGGEEECTTS--CCEEECCCTTCEEC------
T ss_pred             ------------------HHHHHH---HHHHHHHHH--HCCceecccCHHHEEEeCCC--CEEEEeeCCCCeEccCCCcc
Confidence                              014555   778888998  99999999999999995432  25999999999865432211


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                      ..   .....+.|||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+..+               
T Consensus       208 ~~---~~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---------------  263 (336)
T 4g3f_A          208 KS---LLTGDYIPGTETHMAPEVVMG------KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---------------  263 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---------------
T ss_pred             cc---eecCCccccCccccCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---------------
Confidence            00   001235799999999999973      579999999999999999999999998765332               


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHH-------------hcCCCccCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV-------------LKHPWISTA  426 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~-------------l~Hpw~~~~  426 (539)
                      ++..|..+.+.++ ..++.+|+++++||.+||++||.+|||++|+             |+|||+...
T Consensus       264 ~~~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          264 LCLKIASEPPPIR-EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             CHHHHHHSCCGGG-GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HHHHHHcCCCCch-hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            4455666654332 2346799999999999999999999999997             579999754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.4e-51  Score=422.36  Aligned_cols=282  Identities=22%  Similarity=0.323  Sum_probs=184.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      +.+.|++ .+.||+|+||+||+|+++   .+++.||||++.+.  ....++.+|+++|..+.+|||||+++++|++....
T Consensus        19 l~~~Y~i-~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           19 LSNVFKI-EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGTCEE-EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             ccCcEEE-EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            5677887 578999999999999875   46788999998653  23567889999999987899999999999876544


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|      +|.+-                 + +              .+...++.   ++.+.+            
T Consensus        96 ~---lv------mE~~~-----------------g-~--------------~L~~~~~~---l~~~~~------------  119 (361)
T 4f9c_A           96 V---IA------MPYLE-----------------H-E--------------SFLDILNS---LSFQEV------------  119 (361)
T ss_dssp             E---EE------EECCC-----------------C-C--------------CHHHHHTT---CCHHHH------------
T ss_pred             E---EE------EeCCC-----------------c-c--------------cHHHHHcC---CCHHHH------------
Confidence            3   11      11110                 0 0              11111111   000000            


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                                   ..+++|   ++.|+.|+|  ++|||||||||||||++.+  .+.+||+|||
T Consensus       120 -----------------------------~~~~~q---ll~al~ylH--~~gIiHRDiKPeNiLl~~~--~~~~kl~DFG  163 (361)
T 4f9c_A          120 -----------------------------REYMLN---LFKALKRIH--QFGIVHRDVKPSNFLYNRR--LKKYALVDFG  163 (361)
T ss_dssp             -----------------------------HHHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEETT--TTEEEECCCT
T ss_pred             -----------------------------HHHHHH---HHHHHHHHH--HCCeEeCcCCHHHeEEeCC--CCeEEECcCC
Confidence                                         014455   778889998  9999999999999999643  3569999999


Q ss_pred             CccccccCCCCC--------------------CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHH
Q psy16343        282 LGSGIKFNTSVH--------------------SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY  341 (539)
Q Consensus       282 la~~~~~~~~~~--------------------~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily  341 (539)
                      +|+.........                    .......+.+.|||++|||||++.+     ...|+.++||||+|||+|
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~y~~~~DiWSlG~il~  238 (361)
T 4f9c_A          164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-----CPNQTTAIDMWSAGVIFL  238 (361)
T ss_dssp             TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT-----CSCCCTHHHHHHHHHHHH
T ss_pred             CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC-----CCCCCCccchhhhHHHHH
Confidence            997543211000                    0001123457799999999999964     346999999999999999


Q ss_pred             HHHhCCCCCCCCCCC-CCCcccCccch-----------------------hhHHHHHHHHhcCCCCCC------------
Q psy16343        342 ILLCGYPPFYGNCGE-DCGWQRGETCH-----------------------ACQEILFHSIQQGHYDFP------------  385 (539)
Q Consensus       342 ~ll~G~~PF~~~~~~-~~~~~~~~~~~-----------------------~~~~~~~~~i~~~~~~~p------------  385 (539)
                      +|++|++||.+.+.. ++.......++                       .....+...+......+|            
T Consensus       239 ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  318 (361)
T 4f9c_A          239 SLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATN  318 (361)
T ss_dssp             HHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-------------------
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccc
Confidence            999999999764321 00000000000                       000111112211111111            


Q ss_pred             CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        386 EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       386 ~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ...|..+|++++|||++||++||++|+||+|+|+||||++.
T Consensus       319 ~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          319 LEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             ---CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            23478899999999999999999999999999999999764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.4e-51  Score=445.94  Aligned_cols=265  Identities=29%  Similarity=0.516  Sum_probs=206.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .-+.|++ .+.||+|+||+||+|+++.+|+.||||+|.+........+.+|+++|..+ +|||||+|+++|++....+  
T Consensus       155 il~~Y~i-~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~--  230 (573)
T 3uto_A          155 VLDHYDI-HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMV--  230 (573)
T ss_dssp             GGGTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEE--
T ss_pred             CccccEE-EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE--
Confidence            3456776 57899999999999999999999999999765444456788999999997 5999999999998876544  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                       .|      +|.+-                 + +              .|+..+... ..+..+.+              
T Consensus       231 -iv------~E~~~-----------------g-g--------------~L~~~i~~~~~~l~e~~~--------------  257 (573)
T 3uto_A          231 -MI------YEFMS-----------------G-G--------------ELFEKVADEHNKMSEDEA--------------  257 (573)
T ss_dssp             -EE------EECCC-----------------C-C--------------BHHHHHTCTTSCEEHHHH--------------
T ss_pred             -EE------EeecC-----------------C-C--------------cHHHHHHHhCCCCCHHHH--------------
Confidence             12      22111                 1 0              111111000 00000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+++|   ++.++.|+|  ++||+||||||+|||+..+ ..+.+||+|||+|
T Consensus       258 ---------------------------~~~~~q---i~~al~ylH--~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a  304 (573)
T 3uto_A          258 ---------------------------VEYMRQ---VCKGLCHMH--ENNYVHLDLKPENIMFTTK-RSNELKLIDFGLT  304 (573)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTEECCCCCGGGEEESSS-SCCCEEECCCSSC
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--HCCeeeccCChhhccccCC-CCCCEEEeeccce
Confidence                                       014455   778888888  9999999999999999653 3367999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+....         ...+.|||+.|||||++.+      ..|+.++|||||||++|+|++|.+||.+.+         
T Consensus       305 ~~~~~~~---------~~~~~~GT~~y~APEv~~~------~~y~~~~DiWSlGvilyeml~G~~Pf~~~~---------  360 (573)
T 3uto_A          305 AHLDPKQ---------SVKVTTGTAEFAAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGGEN---------  360 (573)
T ss_dssp             EECCTTS---------EEEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS---------
T ss_pred             eEccCCC---------ceeeeEECccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---------
Confidence            8654322         3457899999999999963      579999999999999999999999998764         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                            ...++..|..+.+.++...|..+|++++|||++||++||.+|||++|+|+||||+...+.
T Consensus       361 ------~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          361 ------DDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             ------HHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred             ------HHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence                  345778899999999998899999999999999999999999999999999999876554

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=6e-51  Score=444.01  Aligned_cols=259  Identities=24%  Similarity=0.353  Sum_probs=191.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHH---HHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVE---TFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~---~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ .++||+|+||+||+|+++.+|+.||||+|++..   ......+.+|..   ++.. .+|||||+|+++|++...
T Consensus       189 ddf~i-~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~-~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          189 NDFSV-HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-GDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS-SCCTTBCCEEEEEECSSE
T ss_pred             HHeEE-EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh-CCCCCEeEEEEEEEECCE
Confidence            34665 578999999999999999999999999997532   122334445543   3333 369999999999998766


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-                 + |              .++..+.....+..+.            
T Consensus       267 ly---lV------mEy~~-----------------G-G--------------dL~~~l~~~~~l~E~~------------  293 (689)
T 3v5w_A          267 LS---FI------LDLMN-----------------G-G--------------DLHYHLSQHGVFSEAD------------  293 (689)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHHHHHCCCCHHH------------
T ss_pred             EE---EE------EecCC-----------------C-C--------------cHHHHHHhcCCCCHHH------------
Confidence            55   22      22221                 1 1              1111110000000000            


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                                                   ...|.+|   ++.|+.|+|  ++|||||||||||||+   +..+.+||+||
T Consensus       294 -----------------------------a~~y~~q---Il~aL~yLH--~~gIiHRDLKPeNILl---d~~G~vKL~DF  336 (689)
T 3v5w_A          294 -----------------------------MRFYAAE---IILGLEHMH--NRFVVYRDLKPANILL---DEHGHVRISDL  336 (689)
T ss_dssp             -----------------------------HHHHHHH---HHHHHHHHH--TTTEECCCCSGGGEEE---CTTSCEEECCC
T ss_pred             -----------------------------HHHHHHH---HHHHHHHHH--HCCccccCCchHHeEE---eCCCCEEeccc
Confidence                                         0114555   778888888  9999999999999999   45567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+|+.+...          ...+.||||.|||||++.+     ..+|+.++|||||||++|+|++|++||.+.+..+   
T Consensus       337 GlA~~~~~~----------~~~t~~GTp~YmAPEvl~~-----~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---  398 (689)
T 3v5w_A          337 GLACDFSKK----------KPHASVGTHGYMAPEVLQK-----GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---  398 (689)
T ss_dssp             TTCEECSSC----------CCCSCCSCGGGCCHHHHST-----TCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---
T ss_pred             ceeeecCCC----------CCCCccCCcCccCHHHHhC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---
Confidence            999765322          2357899999999999963     3579999999999999999999999998754322   


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                               ...++..+....+.+|.    .+|++++|||.+||++||.+|++     |+|+++||||++.+|
T Consensus       399 ---------~~~i~~~i~~~~~~~p~----~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          399 ---------KHEIDRMTLTMAVELPD----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             ---------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             ---------HHHHHHhhcCCCCCCCc----cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCH
Confidence                     34466778888887774    68999999999999999999998     799999999998776

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=8.9e-50  Score=401.28  Aligned_cols=281  Identities=20%  Similarity=0.301  Sum_probs=174.2

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +|-..|++ .+.||+|+||+||+|+++.+|+.||||+|++... ...+++.+|+++|.++ +|||||+++++|.+.....
T Consensus         2 R~l~dy~~-~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            2 RYLTDFEP-IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHHHHEEE-EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC---
T ss_pred             CcchhCEE-eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccc
Confidence            35556776 4789999999999999999999999999975432 2345788999999997 6999999999987654321


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .+.. . .++..+         .-+.+|.-+ +              .+                            
T Consensus        80 ---~~~~-~-~~~~~l---------~ivmE~~~g-g--------------~L----------------------------  102 (299)
T 4g31_A           80 ---KLQP-S-SPKVYL---------YIQMQLCRK-E--------------NL----------------------------  102 (299)
T ss_dssp             ------------CEEE---------EEEEECCCS-C--------------CH----------------------------
T ss_pred             ---cccc-c-CCCcEE---------EEEEecCCC-C--------------cH----------------------------
Confidence               0000 0 000000         011222111 0              00                            


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCC-CCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCG-EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                 ..++.+..++..... ....|.+|   ++.|+.|+|  ++|||||||||+|||++.   .+.+||+|||
T Consensus       103 -----------~~~l~~~~~~~~~~~~~~~~i~~q---i~~al~ylH--~~~IiHRDlKp~NILl~~---~~~vKl~DFG  163 (299)
T 4g31_A          103 -----------KDWMNGRCTIEERERSVCLHIFLQ---IAEAVEFLH--SKGLMHRDLKPSNIFFTM---DDVVKVGDFG  163 (299)
T ss_dssp             -----------HHHHHTCCSGGGSCHHHHHHHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEECT---TCCEEECCCC
T ss_pred             -----------HHHHHhcCCCChhHHHHHHHHHHH---HHHHHHHHH--HCcCccccCcHHHeEECC---CCcEEEccCc
Confidence                       001111000000000 00013445   778888888  999999999999999954   4569999999


Q ss_pred             CccccccCCCCCC----CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        282 LGSGIKFNTSVHS----PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       282 la~~~~~~~~~~~----~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|+.+........    ........+.|||+.|||||++.+      ..|+.++|||||||++|+|++   ||.+..   
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyell~---Pf~~~~---  231 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG------NSYSHKVDIFSLGLILFELLY---PFSTQM---  231 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTT------CCCCTHHHHHHHHHHHHHHHS---CCSSHH---
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcC------CCCCCHHHHHHHHHHHHHHcc---CCCCcc---
Confidence            9986543321110    001113356799999999999963      579999999999999999995   886421   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                 .....+..+....  +|+ .|...++++++||.+||++||++|||+.|+|+||||....+
T Consensus       232 -----------~~~~~~~~~~~~~--~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          232 -----------ERVRTLTDVRNLK--FPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             -----------HHHHHHHHHHTTC--CCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             -----------HHHHHHHHHhcCC--CCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence                       1122334444433  332 24456888999999999999999999999999999987654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.9e-48  Score=395.25  Aligned_cols=266  Identities=36%  Similarity=0.670  Sum_probs=199.8

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..|.+.|++ .+.||+|+||.||+|.++.+++.||||++++...    ...+|++++.++.+||||++++++|+++...+
T Consensus        18 ~~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~   92 (342)
T 2qr7_A           18 IQFTDGYEV-KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY   92 (342)
T ss_dssp             -CHHHHEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred             cCccccEEE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence            357888887 5789999999999999999999999999976432    23578889988878999999999998765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+-                 + +              .+...+........+               
T Consensus        93 ---lv------~E~~~-----------------g-g--------------~L~~~i~~~~~~~~~---------------  116 (342)
T 2qr7_A           93 ---VV------TELMK-----------------G-G--------------ELLDKILRQKFFSER---------------  116 (342)
T ss_dssp             ---EE------ECCCC-----------------S-C--------------BHHHHHHTCTTCCHH---------------
T ss_pred             ---EE------EeCCC-----------------C-C--------------cHHHHHHHcCCCCHH---------------
Confidence               11      12110                 0 0              000000000000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-CCCceeccCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-LSPVKLCDFD  281 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-~~~ikl~DFG  281 (539)
                        .++                        .+.++   ++.++.|+|  ++||+||||||+|||+.+.+. .+.+||+|||
T Consensus       117 --~~~------------------------~~~~q---i~~al~~lH--~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg  165 (342)
T 2qr7_A          117 --EAS------------------------AVLFT---ITKTVEYLH--AQGVVHRDLKPSNILYVDESGNPESIRICDFG  165 (342)
T ss_dssp             --HHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred             --HHH------------------------HHHHH---HHHHHHHHH--HCCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence              000                        03334   677888888  999999999999999865432 2459999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++.......        ...+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+....     
T Consensus       166 ~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----  226 (342)
T 2qr7_A          166 FAKQLRAENG--------LLMTPCYTANFVAPEVLER------QGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-----  226 (342)
T ss_dssp             TCEECBCTTC--------CBCCSSCCSSCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-----
T ss_pred             CcccCcCCCC--------ceeccCCCccccCHHHhcC------CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-----
Confidence            9875533221        2457899999999999974      35889999999999999999999999864321     


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                             ....++..|..+.+.++...|..+|+++++||++||..||++|||++|+|+||||...
T Consensus       227 -------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          227 -------TPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             -------CHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             -------CHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence                   2456788899999999988899999999999999999999999999999999999653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.5e-47  Score=385.95  Aligned_cols=301  Identities=56%  Similarity=1.042  Sum_probs=213.3

Q ss_pred             ccccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         39 SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        39 ~~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      +...+.|.+.|++.+++||+|+||.||+|.+..+++.||||++.+........+.+|++++.++.+||||+++++++.+.
T Consensus         4 ~~~~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~   83 (316)
T 2ac3_A            4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE   83 (316)
T ss_dssp             CSSCCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CccCcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            34467799999987789999999999999999999999999997665556778999999999977899999999999765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|                       .++--+ +              .+...+.....+..            
T Consensus        84 ~~~~---lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~------------  110 (316)
T 2ac3_A           84 DRFY---LV-----------------------FEKMRG-G--------------SILSHIHKRRHFNE------------  110 (316)
T ss_dssp             TEEE---EE-----------------------EECCTT-C--------------BHHHHHHHHSSCCH------------
T ss_pred             CEEE---EE-----------------------EEcCCC-C--------------cHHHHHhccCCCCH------------
Confidence            4332   11                       111000 0              00000000000000            


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                           .+++   .                     +..|   ++.++.|+|  ++||+||||||+|||+..++....+||+
T Consensus       111 -----~~~~---~---------------------i~~q---i~~~l~~lH--~~~ivH~dlkp~Nil~~~~~~~~~~kl~  156 (316)
T 2ac3_A          111 -----LEAS---V---------------------VVQD---VASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKIC  156 (316)
T ss_dssp             -----HHHH---H---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred             -----HHHH---H---------------------HHHH---HHHHHHHHH--hCCceeCCCCHHHEEEccCCCcCceEEE
Confidence                 0000   0                     2333   667788888  8999999999999999765555569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||++......... .........+.+||+.|+|||++..... ....|+.++|||||||++|+|++|.+||.+....++
T Consensus       157 Dfg~~~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  234 (316)
T 2ac3_A          157 DFDLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSE-EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC  234 (316)
T ss_dssp             CTTCCC--------------------CCSGGGCCHHHHHHTSH-HHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS
T ss_pred             EccCccccccCCcc-ccccccccccccCCcCccChHHhhcccc-cccCCCcccccHhHHHHHHHHHHCCCCCcccccccc
Confidence            99998765432210 1111223446789999999999863100 012478899999999999999999999999888888


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      .|...+.+......++..+..+.+.+|...|..+++++++||.+||..||.+|||++|+|+||||....+
T Consensus       235 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             CC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             cccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence            8877777777677788899999999987777889999999999999999999999999999999986543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=9.4e-46  Score=382.45  Aligned_cols=267  Identities=37%  Similarity=0.599  Sum_probs=202.3

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC------CCHHHHHHHHHHHHhhcCCCCeeeeeeee
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG------HSRSRVFKEVETFHHCQGHPNIIQLLEYY  115 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~  115 (539)
                      ...+.+.|++ ++.||+|+||.||+|.++.+|+.||||++++...      .....+.+|+.+|..+ +||||++++++|
T Consensus         7 ~~~~~~~y~~-~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~   84 (361)
T 2yab_A            7 QQKVEDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVY   84 (361)
T ss_dssp             CSCGGGTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             CCChhhceEE-eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEE
Confidence            3457888887 6789999999999999999999999999975432      1356788999999987 599999999999


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      ++....+   .|                       .++.-+ +              .+...+.....+..+        
T Consensus        85 ~~~~~~~---lv-----------------------~e~~~g-g--------------~L~~~l~~~~~l~~~--------  115 (361)
T 2yab_A           85 ENRTDVV---LI-----------------------LELVSG-G--------------ELFDFLAQKESLSEE--------  115 (361)
T ss_dssp             ECSSEEE---EE-----------------------EECCCS-C--------------BHHHHHTTCSCCBHH--------
T ss_pred             EeCCEEE---EE-----------------------EEcCCC-C--------------cHHHHHHhcCCCCHH--------
Confidence            8765433   11                       111000 0              111111000000000        


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-CCC
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-LSP  274 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-~~~  274 (539)
                               +++                        .+.+|   ++.++.|+|  ++||+||||||+|||+...+. ...
T Consensus       116 ---------~~~------------------------~i~~q---i~~aL~~LH--~~givHrDlkp~NIll~~~~~~~~~  157 (361)
T 2yab_A          116 ---------EAT------------------------SFIKQ---ILDGVNYLH--TKKIAHFDLKPENIMLLDKNIPIPH  157 (361)
T ss_dssp             ---------HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEESCTTSSSCC
T ss_pred             ---------HHH------------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEeCCCCCccC
Confidence                     011                        03344   677888888  899999999999999965432 236


Q ss_pred             ceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        275 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  354 (539)
Q Consensus       275 ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~  354 (539)
                      +||+|||++.......         ...+.+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+
T Consensus       158 vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~~ll~g~~Pf~~~~  222 (361)
T 2yab_A          158 IKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDT  222 (361)
T ss_dssp             EEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEEecCCceEcCCCC---------ccccCCCCccEECchHHcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999987653321         2346789999999999863      569999999999999999999999998753


Q ss_pred             CCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                                     ...++..|..+.+.++...|..+|+++++||.+||.+||.+|||++|+|+||||....
T Consensus       223 ---------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          223 ---------------KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             ---------------HHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             ---------------HHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence                           3457788889999998888889999999999999999999999999999999998643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.7e-45  Score=390.50  Aligned_cols=266  Identities=36%  Similarity=0.640  Sum_probs=201.9

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ...|.+.|++ .+.||+|+||+||+|.++.+|+.||+|++.+...  .....+.+|+++++.+ +|||||+++++|++..
T Consensus         6 ~~~~~~~Y~i-~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~   83 (444)
T 3soa_A            6 CTRFTEEYQL-FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEG   83 (444)
T ss_dssp             -CHHHHHEEE-EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSS
T ss_pred             cccccCCeEE-EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECC
Confidence            4457888887 5789999999999999999999999999975432  2235678999999997 6999999999998765


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|      +|.+-                 + +              .+...+....+...+            
T Consensus        84 ~~~---lv------~E~~~-----------------g-g--------------~L~~~i~~~~~~~e~------------  110 (444)
T 3soa_A           84 HHY---LI------FDLVT-----------------G-G--------------ELFEDIVAREYYSEA------------  110 (444)
T ss_dssp             EEE---EE------ECCCB-----------------C-C--------------BHHHHHHHCSCCCHH------------
T ss_pred             EEE---EE------EEeCC-----------------C-C--------------CHHHHHHHcCCCCHH------------
Confidence            443   11      11111                 0 0              010000000000000            


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                           +++                        .+.+|   ++.++.|+|  ++||+||||||+|||+......+.+||+|
T Consensus       111 -----~~~------------------------~i~~q---il~aL~~lH--~~givHrDlKp~NIll~~~~~~~~vkL~D  156 (444)
T 3soa_A          111 -----DAS------------------------HCIQQ---ILEAVLHCH--QMGVVHRNLKPENLLLASKLKGAAVKLAD  156 (444)
T ss_dssp             -----HHH------------------------HHHHH---HHHHHHHHH--HTTCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred             -----HHH------------------------HHHHH---HHHHHHHHH--HCCccccCCCHHHEEEeccCCCCcEEEcc
Confidence                 010                        03344   777888888  99999999999999997655567899999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||++........        ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+     
T Consensus       157 FG~a~~~~~~~~--------~~~~~~gt~~Y~APE~l~~------~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----  217 (444)
T 3soa_A          157 FGLAIEVEGEQQ--------AWFGFAGTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFWDED-----  217 (444)
T ss_dssp             CSSCBCCCTTCC--------BCCCSCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----
T ss_pred             CceeEEecCCCc--------eeecccCCcccCCHHHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCcc-----
Confidence            999975533221        2346799999999999863      469999999999999999999999998753     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                ...++..|..+.+.+|...|..+++++++||.+||..||.+|||++|+|+||||..
T Consensus       218 ----------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          218 ----------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             ----------HHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             ----------HHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence                      34578889999999999999999999999999999999999999999999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.1e-45  Score=380.15  Aligned_cols=265  Identities=34%  Similarity=0.614  Sum_probs=202.2

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ..|.+.|++ .+.||+|+||.||+|.+..+++.||||++.+...  .....+.+|++++..+ +|||||++++++.+...
T Consensus        25 ~~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           25 TKFSDNYDV-KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             CHHHHHEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             CCcccCeEE-eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence            357788887 5789999999999999999999999999975432  2235678999999997 59999999999987654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-                 + +              .+...+....+...              
T Consensus       103 ~~---lv------~e~~~-----------------g-g--------------~L~~~l~~~~~~~~--------------  127 (362)
T 2bdw_A          103 HY---LV------FDLVT-----------------G-G--------------ELFEDIVAREFYSE--------------  127 (362)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHHTTCSCCCH--------------
T ss_pred             EE---EE------EecCC-----------------C-C--------------CHHHHHHHcCCCCH--------------
Confidence            33   11      11110                 0 0              01000000000000              


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                         .+++.                        +.+|   ++.++.|+|  ++||+||||||+|||+...+..+.+||+||
T Consensus       128 ---~~~~~------------------------~~~q---i~~al~~lH--~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df  175 (362)
T 2bdw_A          128 ---ADASH------------------------CIQQ---ILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADF  175 (362)
T ss_dssp             ---HHHHH------------------------HHHH---HHHHHHHHH--HTTCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             ---HHHHH------------------------HHHH---HHHHHHHHH--HCCeEeccCchHHEEEecCCCCCCEEEeec
Confidence               01110                        3334   677888888  999999999999999976655567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++.......         .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+      
T Consensus       176 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------  234 (362)
T 2bdw_A          176 GLAIEVNDSE---------AWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDED------  234 (362)
T ss_dssp             TTCBCCTTCC---------SCCCSCSCTTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------
T ss_pred             CcceEecCCc---------ccccCCCCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHHCCCCCCCCC------
Confidence            9987543221         2346789999999999863      469999999999999999999999998753      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                               ...++..|..+.+.+|...|..+++++++||.+||.+||.+|||++|+|+||||...
T Consensus       235 ---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          235 ---------QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             ---------HHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             ---------HHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence                     345778889999999998999999999999999999999999999999999999753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.4e-46  Score=374.02  Aligned_cols=265  Identities=21%  Similarity=0.283  Sum_probs=178.7

Q ss_pred             hhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|.+ ++.||+|+||+||+|+..     .++..||||++++......+++.+|+++|.++ +|||||++++++.++...+
T Consensus        14 ~~~l-~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           14 NIVL-KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GEEE-EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEE
T ss_pred             HeEE-eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEE
Confidence            3444 578999999999999865     36788999999765544567789999999997 5999999999998765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+-                 + +              .+...+...   .|..............+ 
T Consensus        92 ---lV------~Ey~~-----------------~-G--------------~L~~~l~~~---~~~~~~~~~~~~~~~l~-  126 (299)
T 4asz_A           92 ---MV------FEYMK-----------------H-G--------------DLNKFLRAH---GPDAVLMAEGNPPTELT-  126 (299)
T ss_dssp             ---EE------EECCT-----------------T-C--------------BHHHHHHHT---SHHHHHC----CCCCCC-
T ss_pred             ---EE------EEcCC-----------------C-C--------------cHHHHHHhc---CcccccccccCCCCCCC-
Confidence               11      12111                 0 0              000000000   00000000000000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                          |.                    ....+..|   ++.++.|+|  +++||||||||+|||++   ..+.+||+|||+
T Consensus       127 ----~~--------------------~~~~i~~q---ia~gl~yLH--~~~iiHRDlKp~NILl~---~~~~~Ki~DFGl  174 (299)
T 4asz_A          127 ----QS--------------------QMLHIAQQ---IAAGMVYLA--SQHFVHRDLATRNCLVG---ENLLVKIGDFGM  174 (299)
T ss_dssp             ----HH--------------------HHHHHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCCSC
T ss_pred             ----HH--------------------HHHHHHHH---HHHHHHHHH--hCCcccCccCHhhEEEC---CCCcEEECCccc
Confidence                00                    00013445   778888888  89999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      |+........      ....+.+||+.|||||++..      ..|+.++||||+||++|||++ |++||.+.+       
T Consensus       175 a~~~~~~~~~------~~~~~~~gt~~ymAPE~~~~------~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~-------  235 (299)
T 4asz_A          175 SRDVYSTDYY------RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-------  235 (299)
T ss_dssp             HHHHTGGGCE------EETTTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-------
T ss_pred             ceecCCCCce------eecCceecChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-------
Confidence            9754322211      01224579999999999974      579999999999999999998 999998753       


Q ss_pred             cCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        362 RGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                              ...++..|..+.. .+|    ..+++++++||.+||..||++|||++|+  |+|+.
T Consensus       236 --------~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~  285 (299)
T 4asz_A          236 --------NNEVIECITQGRVLQRP----RTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQ  285 (299)
T ss_dssp             --------HHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHH
T ss_pred             --------HHHHHHHHHcCCCCCCC----ccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHH
Confidence                    2346677777653 333    4689999999999999999999999999  45664

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.3e-45  Score=369.28  Aligned_cols=249  Identities=22%  Similarity=0.342  Sum_probs=166.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      ++.||+|+||+||+|+..   ..||||+++....  ...+.+.+|+++|.++ +|||||++++++.++. .+    |   
T Consensus        41 ~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~-~~----i---  108 (307)
T 3omv_A           41 STRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTKDN-LA----I---  108 (307)
T ss_dssp             EEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS-CE----E---
T ss_pred             eeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEECCe-EE----E---
Confidence            568999999999999743   3599999964332  2345788999999997 5999999999875432 11    1   


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                         |.+|.-+ +              .+...+..               ....+    +.... 
T Consensus       109 -------------------VmEy~~g-G--------------sL~~~l~~---------------~~~~l----~~~~~-  134 (307)
T 3omv_A          109 -------------------VTQWCEG-S--------------SLYKHLHV---------------QETKF----QMFQL-  134 (307)
T ss_dssp             -------------------EEECCSS-C--------------BHHHHHHT---------------SCCCC----CHHHH-
T ss_pred             -------------------EEEcCCC-C--------------CHHHHHhh---------------cCCCC----CHHHH-
Confidence                               1122101 0              01000000               00000    00000 


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                                          ..+..|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+|+......
T Consensus       135 --------------------~~i~~q---ia~gL~yLH--~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          135 --------------------IDIARQ---TAQGMDYLH--AKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             --------------------HHHHHH---HHHHHHHHH--HTTCBCSCCCSSSEEEE---TTEEEEECCCSSCBC-----
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCccCCccCHHHEEEC---CCCcEEEeeccCceecccCC
Confidence                                013444   778888888  89999999999999995   44569999999997543221


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhH
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      .      .....+.+||+.|||||++...   ....|+.++||||+||++|||++|++||.+.+.              .
T Consensus       187 ~------~~~~~~~~GT~~ymAPE~l~~~---~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--------------~  243 (307)
T 3omv_A          187 G------SQQVEQPTGSVLWMAPEVIRMQ---DNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------------R  243 (307)
T ss_dssp             -------------CCCCTTSCCHHHHHCC---SSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------------H
T ss_pred             c------ceeecccccCCCccCHHHhhcc---CCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--------------H
Confidence            1      1134567999999999999641   123599999999999999999999999987532              2


Q ss_pred             HHHHHHHhcCCCCCC--CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        371 EILFHSIQQGHYDFP--EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       371 ~~~~~~i~~~~~~~p--~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ..+...+..+. ..|  ...+..+++++++||.+||.+||++|||++|+++
T Consensus       244 ~~~~~~~~~~~-~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          244 DQIIFMVGRGY-ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             HHHHHHHHTTC-CCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             HHHHHHHhcCC-CCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            23444444442 222  2345678999999999999999999999987643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.8e-45  Score=373.06  Aligned_cols=261  Identities=20%  Similarity=0.253  Sum_probs=170.6

Q ss_pred             CceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .+.||+|+||+||+|+..     .+++.||||++++......+++.+|+++|.++ +|||||++++++.+....+   .|
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~---lV  121 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLL---MV  121 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEE---EE
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE---EE
Confidence            467999999999999864     46889999999765544567799999999997 5999999999998765433   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                            +|.+-                 + +              .+...+..... ..+............       .
T Consensus       122 ------~Ey~~-----------------~-G--------------~L~~~l~~~~~-~~~~~~~~~~~~~~~-------l  155 (329)
T 4aoj_A          122 ------FEYMR-----------------H-G--------------DLNRFLRSHGP-DAKLLAGGEDVAPGP-------L  155 (329)
T ss_dssp             ------EECCT-----------------T-C--------------BHHHHHHTSSC-C-----------CCS-------C
T ss_pred             ------EEcCC-----------------C-C--------------cHHHHHHhcCc-ccccccccccccCCC-------C
Confidence                  12111                 0 0              00000000000 000000000000000       0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +...++                  .|..|   ++.++.|+|  +++||||||||+|||++   ..+.+||+|||+|+...
T Consensus       156 ~~~~~~------------------~i~~q---ia~gl~yLH--~~~iiHRDLKp~NILl~---~~~~~Ki~DFGla~~~~  209 (329)
T 4aoj_A          156 GLGQLL------------------AVASQ---VAAGMVYLA--GLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIY  209 (329)
T ss_dssp             CHHHHH------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEE---TTTEEEECCCC------
T ss_pred             CHHHHH------------------HHHHH---HHHHHHHHh--cCCeecccccHhhEEEC---CCCcEEEcccccceecc
Confidence            000000                  13444   778888888  99999999999999995   44569999999998653


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....      ....+.+||+.|||||++..      ..|+.++||||+||++|||++ |++||.+.+            
T Consensus       210 ~~~~~------~~~~~~~gt~~ymAPE~~~~------~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~------------  265 (329)
T 4aoj_A          210 STDYY------RVGGRTMLPIRWMPPESILY------RKFTTESDVWSFGVVLWEIFTYGKQPWYQLS------------  265 (329)
T ss_dssp             ----------------CCCCGGGCCHHHHTT------CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC------------
T ss_pred             CCCcc------eecCcccccccccChhhhcC------CCCCccccccchHHHHHHHHcCCCCCCCCCC------------
Confidence            32211      11235689999999999963      579999999999999999998 999998753            


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...++..|..+. +.+|    ..+++++++||.+||..||++|||++|++++
T Consensus       266 ---~~~~~~~i~~g~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          266 ---NTEAIDCITQGRELERP----RACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             ---HHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             ---HHHHHHHHHcCCCCCCc----ccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence               234566676653 4444    3689999999999999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=3.4e-45  Score=372.90  Aligned_cols=274  Identities=31%  Similarity=0.558  Sum_probs=182.8

Q ss_pred             ccccchhccc--CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLK--GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~--~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ..|.+.|++.  ++.||+|+||.||+|.+..+++.||||++.+.   ....+.+|+.++..+.+||||+++++++++...
T Consensus         4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~   80 (325)
T 3kn6_A            4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH   80 (325)
T ss_dssp             CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence            3456666653  57899999999999999999999999999653   346778999999998789999999999987654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-                 + +              .+...+.....+..+             
T Consensus        81 ~~---lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~-------------  106 (325)
T 3kn6_A           81 TF---LV------MELLN-----------------G-G--------------ELFERIKKKKHFSET-------------  106 (325)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHHHHCSCCCHH-------------
T ss_pred             EE---EE------EEccC-----------------C-C--------------cHHHHHHhcCCCCHH-------------
Confidence            33   11      11110                 0 0              000000000000000             


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                          +++                        .+..+   ++.++.|+|  ++||+||||||+|||+..++....+||+||
T Consensus       107 ----~~~------------------------~i~~q---i~~~l~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~kl~Df  153 (325)
T 3kn6_A          107 ----EAS------------------------YIMRK---LVSAVSHMH--DVGVVHRDLKPENLLFTDENDNLEIKIIDF  153 (325)
T ss_dssp             ----HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEEC----CEEEECCC
T ss_pred             ----HHH------------------------HHHHH---HHHHHHHHH--HCCCeecCCCHHHEEEecCCCcccEEEecc
Confidence                000                        03334   677888888  999999999999999976554457999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+++......        ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+....  
T Consensus       154 g~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--  217 (325)
T 3kn6_A          154 GFARLKPPDN--------QPLKTPCFTLHYAAPELLNQ------NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT--  217 (325)
T ss_dssp             TTCEECCC------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------
T ss_pred             ccceecCCCC--------CcccccCCCcCccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--
Confidence            9987543221        12346789999999999863      5699999999999999999999999987543211  


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                            ......+...+..+.+.++...|..+++++++||.+||..||.+|||++|+++||||.....
T Consensus       218 ------~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          218 ------CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             ------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             ------cccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence                  11234577888899999988888899999999999999999999999999999999986543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.9e-45  Score=379.02  Aligned_cols=257  Identities=24%  Similarity=0.413  Sum_probs=188.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||.||+|+++.+++.||||++.+.   .......+.+|+.++..+.+||||++++++|++....+  
T Consensus        24 ~y~~-~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~--  100 (353)
T 3txo_A           24 NFEF-IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF--  100 (353)
T ss_dssp             CEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE--
T ss_pred             heEE-EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE--
Confidence            4554 47899999999999999999999999999653   12234567889999998778999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .+|--+ +              .+...+.....+..+.                
T Consensus       101 -lv-----------------------~E~~~g-g--------------~L~~~l~~~~~~~~~~----------------  125 (353)
T 3txo_A          101 -FV-----------------------MEFVNG-G--------------DLMFHIQKSRRFDEAR----------------  125 (353)
T ss_dssp             -EE-----------------------EECCCS-C--------------BHHHHHHHHSSCCHHH----------------
T ss_pred             -EE-----------------------EeCCCC-C--------------cHHHHHHHcCCCCHHH----------------
Confidence             11                       111000 0              0000000000000000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                       ++                        .|..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       126 -~~------------------------~~~~q---i~~aL~~LH--~~givHrDlkp~NILl~---~~g~ikL~DFG~a~  172 (353)
T 3txo_A          126 -AR------------------------FYAAE---IISALMFLH--DKGIIYRDLKLDNVLLD---HEGHCKLADFGMCK  172 (353)
T ss_dssp             -HH------------------------HHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             -HH------------------------HHHHH---HHHHHHHHH--HCCCcccCCCHHHEEEC---CCCCEEEcccccee
Confidence             00                        03334   667788888  99999999999999994   45679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+          
T Consensus       173 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~----------  228 (353)
T 3txo_A          173 EGICNG--------VTTATFCGTPDYIAPEILQE------MLYGPAVDWWAMGVLLYEMLCGHAPFEAEN----------  228 (353)
T ss_dssp             CSCC-----------------CCGGGCCHHHHHH------HHCTTHHHHHHHHHHHHHHHHSSCSSCCSS----------
T ss_pred             ecccCC--------ccccccCCCcCeEChhhcCC------CCcCCccCCCcchHHHHHHHhCCCCCCCCC----------
Confidence            432211        12357899999999999974      468999999999999999999999998754          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH------HHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta------~e~l~Hpw~~~~~~  428 (539)
                           ...++..|..+.+.+|.    .+++++++||++||.+||.+||++      +|+++||||....|
T Consensus       229 -----~~~~~~~i~~~~~~~p~----~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w  289 (353)
T 3txo_A          229 -----EDDLFEAILNDEVVYPT----WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW  289 (353)
T ss_dssp             -----HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCH
T ss_pred             -----HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCH
Confidence                 34578888889888885    589999999999999999999998      89999999998765

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.1e-44  Score=378.54  Aligned_cols=267  Identities=23%  Similarity=0.369  Sum_probs=191.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.||+|+++.+++.||||++++...   .....+.+|+.++.++.+|||||+++++|++....+ 
T Consensus        52 ~~y~~-~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~-  129 (396)
T 4dc2_A           52 QDFDL-LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF-  129 (396)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE-
T ss_pred             hHcEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE-
Confidence            34554 5789999999999999999999999999975422   223457889999988778999999999998765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .+|--+ +              .+...+.....+..+..              
T Consensus       130 --lV-----------------------~E~~~g-g--------------~L~~~l~~~~~l~~~~~--------------  155 (396)
T 4dc2_A          130 --FV-----------------------IEYVNG-G--------------DLMFHMQRQRKLPEEHA--------------  155 (396)
T ss_dssp             --EE-----------------------EECCTT-C--------------BHHHHHHHHSSCCHHHH--------------
T ss_pred             --EE-----------------------EEcCCC-C--------------cHHHHHHHcCCCCHHHH--------------
Confidence              11                       111000 0              00000000000000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+..+   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||++
T Consensus       156 ---------------------------~~~~~q---i~~aL~~LH--~~givHrDLKp~NILl~---~~g~ikL~DFGla  200 (396)
T 4dc2_A          156 ---------------------------RFYSAE---ISLALNYLH--ERGIIYRDLKLDNVLLD---SEGHIKLTDYGMC  200 (396)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--HCCEEeccCCHHHEEEC---CCCCEEEeeccee
Confidence                                       003333   667788888  99999999999999994   4567999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+....+...   
T Consensus       201 ~~~~~~~--------~~~~~~~gt~~Y~aPE~l~~------~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~---  263 (396)
T 4dc2_A          201 KEGLRPG--------DTTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---  263 (396)
T ss_dssp             BCCCCTT--------CCBCCCCBCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------
T ss_pred             eecccCC--------CccccccCCcccCCchhhcC------CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc---
Confidence            7422111        12457899999999999963      579999999999999999999999997643221100   


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH------HHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta------~e~l~Hpw~~~~~~  428 (539)
                         ......++..|..+.+.+|.    .+|+++++||++||++||.+||++      +|+++||||....|
T Consensus       264 ---~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          264 ---QNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             ----CCHHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             ---hhhHHHHHHHHhccccCCCC----cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence               11234567788888888885    589999999999999999999995      79999999998765

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.8e-44  Score=362.37  Aligned_cols=261  Identities=20%  Similarity=0.220  Sum_probs=175.5

Q ss_pred             CceeceeCceEEEEEEEc-----cCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         53 GEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .+.||+|+||+||+|...     .+++.||||+++... ....+.+.+|+.+|.++ +|||||++++++.+....+   .
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~---l  106 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLS---M  106 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE---E
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEE---E
Confidence            357999999999999853     467899999996432 33467899999999997 5999999999997765433   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEecc-ccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfg-l~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      |      +|.+-              .| |...+.... ...         ..+.   ...  .        .......+
T Consensus       107 V------~Ey~~--------------~G~L~~~L~~~~-~~~---------~~~~---~~~--~--------~~~~~~l~  143 (308)
T 4gt4_A          107 I------FSYCS--------------HGDLHEFLVMRS-PHS---------DVGS---TDD--D--------RTVKSALE  143 (308)
T ss_dssp             E------EECCS--------------SCBHHHHHHTTC-SSC---------CCC------------------CCEECCCC
T ss_pred             E------EEcCC--------------CCcHHHHHHhhC-ccc---------cccc---ccc--c--------cccccCCC
Confidence            1      11110              00 000000000 000         0000   000  0        00000000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                       |.  . +                 ..+..|   ++.++.|+|  +++||||||||+|||++   ..+.+||+|||+|+.
T Consensus       144 -~~--~-~-----------------~~i~~q---ia~gl~yLH--~~~iiHRDLK~~NILl~---~~~~~Ki~DFGlar~  194 (308)
T 4gt4_A          144 -PP--D-F-----------------VHLVAQ---IAAGMEYLS--SHHVVHKDLATRNVLVY---DKLNVKISDLGLFRE  194 (308)
T ss_dssp             -HH--H-H-----------------HHHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCSCCBCG
T ss_pred             -HH--H-H-----------------HHHHHH---HHHHHHHHH--hCCCCCCCccccceEEC---CCCCEEECCccccee
Confidence             00  0 0                 013344   778888888  99999999999999994   446799999999986


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......      ....+.+||+.|||||++..      ..|+.++||||+||++|||++ |.+||.+.+          
T Consensus       195 ~~~~~~~------~~~~~~~gt~~ymAPE~l~~------~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~----------  252 (308)
T 4gt4_A          195 VYAADYY------KLLGNSLLPIRWMAPEAIMY------GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS----------  252 (308)
T ss_dssp             GGGGGCB------CSSSSSCBCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC----------
T ss_pred             ccCCCce------eEecccccCCcccCHHHHhC------CCCCccchhhhHHHHHHHHHhCCCCCCCCCC----------
Confidence            5432211      12346789999999999974      469999999999999999998 899998754          


Q ss_pred             cchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        365 TCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           ...+...|..+.. ..|    ..+++++.+||.+||..||++|||++|++++
T Consensus       253 -----~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          253 -----NQDVVEMIRNRQVLPCP----DDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             -----HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----HHHHHHHHHcCCCCCCc----ccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                 2346667776643 233    4689999999999999999999999999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=9.1e-44  Score=362.92  Aligned_cols=256  Identities=32%  Similarity=0.490  Sum_probs=190.6

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      -+.|++ .+.||+|+||.||+|.+..+|+.||||++.+...  ....++.+|+++++.+ +||||+++++++++....+ 
T Consensus        14 ~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~-   90 (328)
T 3fe3_A           14 IGNYRL-LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLY-   90 (328)
T ss_dssp             ETTEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE-
T ss_pred             cCCEEE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEE-
Confidence            445665 5789999999999999999999999999965422  2345678999999987 5999999999997655433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+....-+.++                
T Consensus        91 --lv------~e~~~-----------------~-~--------------~L~~~l~~~~~l~~~----------------  114 (328)
T 3fe3_A           91 --LI------MEYAS-----------------G-G--------------EVFDYLVAHGRMKEK----------------  114 (328)
T ss_dssp             --EE------ECCCT-----------------T-C--------------BHHHHHHHHCCCCHH----------------
T ss_pred             --EE------EECCC-----------------C-C--------------cHHHHHHHcCCCCHH----------------
Confidence              11      11110                 0 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       115 -~~~------------------------~~~~q---i~~al~~lH--~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a  161 (328)
T 3fe3_A          115 -EAR------------------------SKFRQ---IVSAVQYCH--QKRIVHRDLKAENLLLD---ADMNIKIADFGFS  161 (328)
T ss_dssp             -HHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECSTTCC
T ss_pred             -HHH------------------------HHHHH---HHHHHHHHH--HCCEeccCCCHHHEEEc---CCCCEEEeeccCc
Confidence             010                        03334   677888888  99999999999999994   4567999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCC-CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY-DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y-~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......         ...+.|||+.|+|||++.+      ..| +.++|||||||++|+|++|.+||.+.+        
T Consensus       162 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------  218 (328)
T 3fe3_A          162 NEFTVGG---------KLDAFCGAPPYAAPELFQG------KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------  218 (328)
T ss_dssp             GGGSSSC---------GGGTTSSSGGGCCHHHHHT------CCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------
T ss_pred             eecCCCC---------ccccccCCcceeCcccccC------CCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------
Confidence            7543321         2457799999999999974      344 478999999999999999999998753        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                             ...+...+..+.+.+|.    .+|+++++||++||..||.+|||++|+|+||||....
T Consensus       219 -------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          219 -------LKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             -------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             -------HHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence                   34567788888888875    5899999999999999999999999999999998644

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.2e-44  Score=369.88  Aligned_cols=258  Identities=27%  Similarity=0.420  Sum_probs=192.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.||+|+++.+|+.||||++++..   ......+..|..++..+.+||||++++++|++....+ 
T Consensus        17 ~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~-   94 (345)
T 1xjd_A           17 EDFIL-HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF-   94 (345)
T ss_dssp             TTEEE-EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE-
T ss_pred             HHeEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE-
Confidence            34554 578999999999999999999999999996531   2345667889999988768999999999998765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++--+ +              .+...+...                ...+. 
T Consensus        95 --lv-----------------------~E~~~g-g--------------~L~~~l~~~----------------~~~~~-  117 (345)
T 1xjd_A           95 --FV-----------------------MEYLNG-G--------------DLMYHIQSC----------------HKFDL-  117 (345)
T ss_dssp             --EE-----------------------EECCTT-C--------------BHHHHHHHH----------------SSCCH-
T ss_pred             --EE-----------------------EeCCCC-C--------------cHHHHHHHc----------------CCCCH-
Confidence              11                       111000 0              000000000                00000 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       118 ~~~~------------------------~~~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a  165 (345)
T 1xjd_A          118 SRAT------------------------FYAAE---IILGLQFLH--SKGIVYRDLKLDNILLD---KDGHIKIADFGMC  165 (345)
T ss_dssp             HHHH------------------------HHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             HHHH------------------------HHHHH---HHHHHHHHH--HCCeEeCCCChhhEEEC---CCCCEEEeEChhh
Confidence            0000                        02333   667788888  99999999999999994   4567999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+         
T Consensus       166 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~---------  222 (345)
T 1xjd_A          166 KENMLGD--------AKTNTFCGTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD---------  222 (345)
T ss_dssp             BCCCCTT--------CCBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             hhcccCC--------CcccCCCCCcccCChhhhcC------CCCCChhhhHHHHHHHHHHhcCCCCCCCCC---------
Confidence            7532221        12357899999999999963      568999999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHH-HHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA-SVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~-e~l~Hpw~~~~~~  428 (539)
                            ...++..|..+.+.+|.    .+++++++||.+||.+||.+||++. ++++||||....|
T Consensus       223 ------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          223 ------EEELFHSIRMDNPFYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             ------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             ------HHHHHHHHHhCCCCCCc----ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCH
Confidence                  34577888888888774    5899999999999999999999998 9999999988765

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.5e-44  Score=367.28  Aligned_cols=268  Identities=22%  Similarity=0.288  Sum_probs=178.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCC-----cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTE-----LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~-----~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ ++.||+|+||+||+|....++     +.||||++..... .....+.+|+++|.++.+|||||+++++|.....
T Consensus        64 ~~~~l-~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           64 DRLKL-GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHeEE-eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            44555 578999999999999876543     5799999965432 2345688999999999877999999998855322


Q ss_pred             -ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccc-cccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 -HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 -~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl-~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                       .+   .|      +|.+-              .|- ...+.....             ...+.-.+||....      .
T Consensus       143 ~~~---iV------~Ey~~--------------~G~L~~~L~~~~~-------------~~~~~~~~~~~~~~------~  180 (353)
T 4ase_A          143 PLM---VI------VEFCK--------------FGNLSTYLRSKRN-------------EFVPYKVAPEDLYK------D  180 (353)
T ss_dssp             CCE---EE------EECCT--------------TEEHHHHHHHTGG-------------GBCCC-------CT------T
T ss_pred             EEE---EE------EEcCC--------------CCCHHHHHHhccc-------------ccccccccchhhcc------c
Confidence             11   11      11110              000 000000000             00000011111000      0


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      .    .+   ..-++                  .+..|   ++.++.|+|  +++||||||||+|||++   ..+.+||+
T Consensus       181 ~----l~---~~~~~------------------~~~~q---ia~gl~yLH--~~~iiHRDLK~~NILl~---~~~~vKi~  227 (353)
T 4ase_A          181 F----LT---LEHLI------------------CYSFQ---VAKGMEFLA--SRKCIHRDLAARNILLS---EKNVVKIC  227 (353)
T ss_dssp             C----BC---HHHHH------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEEC
T ss_pred             c----CC---HHHHH------------------HHHHH---HHHHHHhHh--hCCeecCccCccceeeC---CCCCEEEC
Confidence            0    00   00000                  03334   777888888  99999999999999994   44679999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED  357 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~  357 (539)
                      |||+|+.+......      ....+.+||+.|||||++..      ..|+.++||||+||++|||++ |.+||.+.+.. 
T Consensus       228 DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~------~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-  294 (353)
T 4ase_A          228 DFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-  294 (353)
T ss_dssp             CCGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred             cchhhhhcccCCCc------eeeccccccccccCHHHHhc------CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-
Confidence            99999865432211      12346789999999999974      579999999999999999998 99999875421 


Q ss_pred             CCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                   +.+...+..+. +.+|    ..+++++.+||.+||..||++|||++|+++|
T Consensus       295 -------------~~~~~~i~~g~~~~~p----~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          295 -------------EEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             -------------HHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------HHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                         33555566553 3444    3589999999999999999999999999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=8e-44  Score=364.64  Aligned_cols=256  Identities=27%  Similarity=0.439  Sum_probs=190.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||.||+|+++.+|+.||||++++.   .......+.+|+.++..+ +||||++++++|++....+  
T Consensus         6 ~y~~-~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~--   81 (337)
T 1o6l_A            6 DFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLC--   81 (337)
T ss_dssp             GEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEE--
T ss_pred             HeEE-EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEE--
Confidence            4554 47899999999999999999999999999653   223456788999999986 5999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .++.-+ +              .+...+.....+..+..               
T Consensus        82 -lv-----------------------~E~~~g-g--------------~L~~~l~~~~~~~~~~~---------------  107 (337)
T 1o6l_A           82 -FV-----------------------MEYANG-G--------------ELFFHLSRERVFTEERA---------------  107 (337)
T ss_dssp             -EE-----------------------EECCTT-C--------------BHHHHHHHHSCCCHHHH---------------
T ss_pred             -EE-----------------------EeCCCC-C--------------cHHHHHHhcCCCCHHHH---------------
Confidence             11                       111000 0              00000000000000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                        +                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       108 --~------------------------~~~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~  153 (337)
T 1o6l_A          108 --R------------------------FYGAE---IVSALEYLH--SRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  153 (337)
T ss_dssp             --H------------------------HHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             --H------------------------HHHHH---HHHHHHHHH--HCCeecCcCCHHHEEEC---CCCCEEEeeccchh
Confidence              0                        02333   667788888  99999999999999994   45679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+          
T Consensus       154 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~----------  209 (337)
T 1o6l_A          154 EGISDG--------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----------  209 (337)
T ss_dssp             CSCCTT--------CCBCCCEECGGGCCGGGGSS------SCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----------
T ss_pred             hcccCC--------CcccccccChhhCChhhhcC------CCCCchhhcccchhHHHHHhcCCCCCCCCC----------
Confidence            532211        12357899999999999863      568999999999999999999999998653          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                           ...++..|..+.+.+|.    .+++++++||.+||.+||.+||     +++|+++||||....+
T Consensus       210 -----~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~  269 (337)
T 1o6l_A          210 -----HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             -----HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             -----HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCH
Confidence                 34567788888888875    5899999999999999999999     8999999999987665

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4.8e-44  Score=384.01  Aligned_cols=267  Identities=34%  Similarity=0.618  Sum_probs=203.6

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      ...|.+.|++ .++||+|+||.||+|.+..+++.||||++.+..   ......+.+|++++.++ +|||||+++++|++.
T Consensus        21 ~~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~   98 (484)
T 3nyv_A           21 TAIFSDRYKG-QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDK   98 (484)
T ss_dssp             CCCHHHHEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECS
T ss_pred             CCcccCceEE-eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeC
Confidence            3457888887 578999999999999999999999999996532   23467789999999987 699999999999876


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|      +|.+.                 + +              .+...+........            
T Consensus        99 ~~~~---lv------~e~~~-----------------~-~--------------~L~~~~~~~~~~~~------------  125 (484)
T 3nyv_A           99 GYFY---LV------GEVYT-----------------G-G--------------ELFDEIISRKRFSE------------  125 (484)
T ss_dssp             SEEE---EE------ECCCC-----------------S-C--------------BHHHHHHTCSCCBH------------
T ss_pred             CEEE---EE------EecCC-----------------C-C--------------CHHHHHHhcCCCCH------------
Confidence            5433   11      11110                 0 0              00000000000000            


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                           .+++                        .+.+|   ++.++.|+|  ++||+||||||+|||+...+..+.+||+
T Consensus       126 -----~~~~------------------------~i~~q---i~~~l~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~~kl~  171 (484)
T 3nyv_A          126 -----VDAA------------------------RIIRQ---VLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRII  171 (484)
T ss_dssp             -----HHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred             -----HHHH------------------------HHHHH---HHHHHHHHH--HCCeeeCCCCHHHEEEecCCCCCcEEEE
Confidence                 0010                        03344   677888888  8999999999999999765556789999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+++......         ...+.+||+.|+|||++.+       .|+.++|||||||++|+|++|.+||.+.+    
T Consensus       172 Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~----  231 (484)
T 3nyv_A          172 DFGLSTHFEASK---------KMKDKIGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNGAN----  231 (484)
T ss_dssp             CTTHHHHBCCCC---------SHHHHTTGGGTCCHHHHHT-------CCCTHHHHHHHHHHHHHHHHSSCSSCCSS----
T ss_pred             eeeeeEEccccc---------ccccCCCCccccCceeecC-------CCCCcceeHHHHHHHHHHHHCCCCCCCCC----
Confidence            999987543221         2346789999999999863       58999999999999999999999998753    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                 ...+...|..+.+.++.+.|..+|+++++||++||.+||.+|||++|+|+||||.....
T Consensus       232 -----------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          232 -----------EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             -----------HHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             -----------HHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence                       34567788899999888889999999999999999999999999999999999976443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=3.8e-44  Score=369.12  Aligned_cols=268  Identities=35%  Similarity=0.610  Sum_probs=198.8

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC-----CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL-----PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~-----~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      .|.+.|++ .+.||+|+||.||+|.++.+++.||||++++.     .......+.+|+.++..+ +|||||+++++|++.
T Consensus        21 ~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~   98 (351)
T 3c0i_A           21 LFEDVYEL-CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSD   98 (351)
T ss_dssp             CHHHHEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEET
T ss_pred             ccccceEE-eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeC
Confidence            47788887 57899999999999999999999999998532     122457789999999987 599999999999775


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|                       .++.-+ +              .+...+          .....  ...
T Consensus        99 ~~~~---lv-----------------------~e~~~g-~--------------~L~~~l----------~~~~~--~~~  125 (351)
T 3c0i_A           99 GMLY---MV-----------------------FEFMDG-A--------------DLCFEI----------VKRAD--AGF  125 (351)
T ss_dssp             TEEE---EE-----------------------EECCSS-C--------------BHHHHH----------HHHHH--TTC
T ss_pred             CEEE---EE-----------------------EeCCCC-C--------------CHHHHH----------HHhcc--cCC
Confidence            4433   11                       111000 0              000000          00000  000


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      .++. ..++                        .+.+|   ++.++.|+|  ++||+||||||+|||+..++....+||+
T Consensus       126 ~~~~-~~~~------------------------~i~~q---i~~al~~lH--~~~ivHrDlkp~NIl~~~~~~~~~vkl~  175 (351)
T 3c0i_A          126 VYSE-AVAS------------------------HYMRQ---ILEALRYCH--DNNIIHRDVKPHCVLLASKENSAPVKLG  175 (351)
T ss_dssp             CCCH-HHHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred             CCCH-HHHH------------------------HHHHH---HHHHHHHHH--HCCceeccCChHHeEEecCCCCCcEEEe
Confidence            0000 0000                        03344   677888888  9999999999999999766555679999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||++........        ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.     
T Consensus       176 Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~-----  236 (351)
T 3c0i_A          176 GFGVAIQLGESGL--------VAGGRVGTPHFMAPEVVKR------EPYGKPVDVWGCGVILFILLSGCLPFYGT-----  236 (351)
T ss_dssp             CCTTCEECCTTSC--------BCCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCSS-----
T ss_pred             cCcceeEecCCCe--------eecCCcCCcCccCHHHHcC------CCCCchHhhHHHHHHHHHHHHCCCCCCCc-----
Confidence            9999875533211        1235689999999999963      46899999999999999999999999764     


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                 ...++..+..+.+.++...|..+++++++||.+||..||.+|||+.|+|+||||...
T Consensus       237 -----------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          237 -----------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             -----------HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             -----------HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence                       234677788888888877788999999999999999999999999999999999754

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2e-43  Score=359.91  Aligned_cols=265  Identities=36%  Similarity=0.597  Sum_probs=196.7

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC------CCHHHHHHHHHHHHhhcCCCCeeeeeeeec
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG------HSRSRVFKEVETFHHCQGHPNIIQLLEYYE  116 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~  116 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+|+.||||++.+...      .....+.+|+.++..+ +||||++++++|.
T Consensus         7 ~~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~   84 (326)
T 2y0a_A            7 ENVDDYYDT-GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYE   84 (326)
T ss_dssp             SCHHHHEEE-EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             CCcccceEe-ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence            346777876 5789999999999999999999999999965432      1356788999999997 5999999999997


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +....+   .|                       .++.-+ +              .+...+.....+..+         
T Consensus        85 ~~~~~~---lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~---------  114 (326)
T 2y0a_A           85 NKTDVI---LI-----------------------LELVAG-G--------------ELFDFLAEKESLTEE---------  114 (326)
T ss_dssp             CSSEEE---EE-----------------------EECCCS-C--------------BHHHHHTTSSCCBHH---------
T ss_pred             eCCEEE---EE-----------------------EEcCCC-C--------------CHHHHHHhcCCcCHH---------
Confidence            654332   11                       111000 0              000000000000000         


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC-CCCCc
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD-QLSPV  275 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~-~~~~i  275 (539)
                              +++.                        +..+   ++.++.|+|  ++||+||||||+|||+..++ ....+
T Consensus       115 --------~~~~------------------------i~~q---i~~al~~lH--~~~ivH~Dlkp~NIll~~~~~~~~~~  157 (326)
T 2y0a_A          115 --------EATE------------------------FLKQ---ILNGVYYLH--SLQIAHFDLKPENIMLLDRNVPKPRI  157 (326)
T ss_dssp             --------HHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEESCSSSSSCCE
T ss_pred             --------HHHH------------------------HHHH---HHHHHHHHH--HCCeEcCCCCHHHEEEecCCCCCCCE
Confidence                    0110                        3334   667788888  99999999999999996543 22369


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||+++......         .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+ 
T Consensus       158 kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~-  221 (326)
T 2y0a_A          158 KIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDT-  221 (326)
T ss_dssp             EECCCTTCEECCTTS---------CCCCCCSCTTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-
T ss_pred             EEEECCCCeECCCCC---------ccccccCCcCcCCceeecC------CCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-
Confidence            999999987653322         1335689999999999863      468999999999999999999999998753 


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                    .......+....+.++...|..+++++++||.+||..||.+|||++|+|+||||...
T Consensus       222 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          222 --------------KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             --------------HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             --------------HHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence                          234566777777888776778899999999999999999999999999999999754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.3e-43  Score=371.48  Aligned_cols=274  Identities=31%  Similarity=0.584  Sum_probs=191.4

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      ...+-+.|++..++||+|+||+||+|.++.+++.||||++++     ...+.+|++++.++.+||||++++++|+.....
T Consensus        56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAG  130 (400)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence            334556677656789999999999999999999999999964     246778999987777899999999988652100


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .            ..+.          -+.+|--+ +              .+...+....              ...+ 
T Consensus       131 ~------------~~~~----------lv~E~~~g-g--------------~L~~~l~~~~--------------~~~l-  158 (400)
T 1nxk_A          131 R------------KCLL----------IVMECLDG-G--------------ELFSRIQDRG--------------DQAF-  158 (400)
T ss_dssp             E------------EEEE----------EEEECCCS-E--------------EHHHHHHCC-----------------CC-
T ss_pred             C------------cEEE----------EEEEeCCC-C--------------cHHHHHHHhC--------------CCCC-
Confidence            0            0000          01111000 0              0000000000              0000 


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                            +...+.                  .+.++   ++.++.|+|  ++||+||||||+|||+...+..+.+||+|||
T Consensus       159 ------~~~~~~------------------~i~~q---i~~aL~~LH--~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG  209 (400)
T 1nxk_A          159 ------TEREAS------------------EIMKS---IGEAIQYLH--SINIAHRDVKPENLLYTSKRPNAILKLTDFG  209 (400)
T ss_dssp             ------BHHHHH------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred             ------CHHHHH------------------HHHHH---HHHHHHHHH--HCCccccCcCcceEEEecCCCCccEEEEecc
Confidence                  000000                  03344   677888888  8999999999999999765446789999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++......         ...+.|||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+.....  
T Consensus       210 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--  272 (400)
T 1nxk_A          210 FAKETTSHN---------SLTTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--  272 (400)
T ss_dssp             TCEECC--------------------CTTCCGGGSCC------CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC--
T ss_pred             cccccCCCC---------ccccCCCCCCccCHhhcCC------CCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc--
Confidence            987543221         2347799999999999853      57999999999999999999999999876533210  


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                               ..+...|..+.+.+|...|..+++++++||++||..||.+|||++|+|+||||....
T Consensus       273 ---------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          273 ---------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             ---------CSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             ---------HHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence                     114566778899999888999999999999999999999999999999999997643

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=6.5e-44  Score=367.56  Aligned_cols=257  Identities=24%  Similarity=0.377  Sum_probs=190.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||.||+|+++.+++.||||++++.   .......+.+|..++..+.+||||++++++|++....+  
T Consensus        21 ~y~~-~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~--   97 (353)
T 2i0e_A           21 DFNF-LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY--   97 (353)
T ss_dssp             TEEE-EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE--
T ss_pred             HcEE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE--
Confidence            3554 47899999999999999999999999999653   12345667889999988768999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .++--+ +              .+...+.....+..+                 
T Consensus        98 -lv-----------------------~E~~~g-g--------------~L~~~l~~~~~~~~~-----------------  121 (353)
T 2i0e_A           98 -FV-----------------------MEYVNG-G--------------DLMYHIQQVGRFKEP-----------------  121 (353)
T ss_dssp             -EE-----------------------EECCCS-C--------------BHHHHHHHHSSCCHH-----------------
T ss_pred             -EE-----------------------EeCCCC-C--------------cHHHHHHhcCCCCHH-----------------
Confidence             11                       111000 0              000000000000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       122 ~~~------------------------~~~~q---i~~aL~~LH--~~givHrDlkp~NIll~---~~g~vkL~DFG~a~  169 (353)
T 2i0e_A          122 HAV------------------------FYAAE---IAIGLFFLQ--SKGIIYRDLKLDNVMLD---SEGHIKIADFGMCK  169 (353)
T ss_dssp             HHH------------------------HHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--HCCEEeccCCHHHEEEc---CCCcEEEEeCCccc
Confidence            000                        02333   667788888  99999999999999994   45679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+          
T Consensus       170 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~----------  225 (353)
T 2i0e_A          170 ENIWDG--------VTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGED----------  225 (353)
T ss_dssp             CCCCTT--------CCBCCCCSCGGGCCHHHHTT------CCBSTHHHHHHHHHHHHHHHHSSCSSCCSS----------
T ss_pred             ccccCC--------cccccccCCccccChhhhcC------CCcCCcccccchHHHHHHHHcCCCCCCCCC----------
Confidence            532211        12357899999999999963      579999999999999999999999998753          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                           ...++..|..+.+.+|.    .+|+++++||.+||.+||.+||+     ++++++||||....|
T Consensus       226 -----~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          226 -----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             -----HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             -----HHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence                 34577888888888885    68999999999999999999995     699999999987765

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=8.9e-44  Score=382.23  Aligned_cols=269  Identities=36%  Similarity=0.656  Sum_probs=204.3

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      ...+.|.+.|++ .+.||+|+||+||+|.+..+++.||||++.+.  .......+.+|++++.++ +|||||++++++++
T Consensus        15 ~~~g~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~   92 (486)
T 3mwu_A           15 YFQGTFAERYNI-VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILED   92 (486)
T ss_dssp             TTCCHHHHHEEE-EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             cccCChhcceEE-eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEc
Confidence            346678999997 57899999999999999999999999999642  223456788999999997 69999999999987


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|      +|.+.                 + +              .+...+.......++          
T Consensus        93 ~~~~~---lv------~e~~~-----------------~-~--------------~L~~~~~~~~~~~~~----------  121 (486)
T 3mwu_A           93 SSSFY---IV------GELYT-----------------G-G--------------ELFDEIIKRKRFSEH----------  121 (486)
T ss_dssp             SSEEE---EE------ECCCC-----------------S-C--------------BHHHHHHHHSSCCHH----------
T ss_pred             CCEEE---EE------EEcCC-----------------C-C--------------cHHHHHHhcCCCCHH----------
Confidence            65433   11      11110                 0 0              000000000000000          


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                             .++                        .+.++   ++.++.|+|  ++||+||||||+|||+...+..+.+||
T Consensus       122 -------~~~------------------------~i~~q---i~~al~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~~kl  165 (486)
T 3mwu_A          122 -------DAA------------------------RIIKQ---VFSGITYMH--KHNIVHRDLKPENILLESKEKDCDIKI  165 (486)
T ss_dssp             -------HHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred             -------HHH------------------------HHHHH---HHHHHHHHH--HCCeEeccCchHHEEEecCCCCCCEEE
Confidence                   000                        03344   677888888  999999999999999976666678999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||+++......         ...+.+||+.|+|||++.+       .|+.++|||||||++|+|++|.+||.+.+   
T Consensus       166 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~---  226 (486)
T 3mwu_A          166 IDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKN---  226 (486)
T ss_dssp             CSCSCTTTBCCC-------------CCTTGGGGCCGGGGGS-------CCCHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred             EECCcCeECCCCC---------ccCCCcCCCCCCCHHHhCC-------CCCchhhHHHHHHHHHHHHhCCCCCCCCC---
Confidence            9999987543322         2346689999999999863       48999999999999999999999998753   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                  ...+...+..+.+.++.+.|..+|+++++||.+||.+||.+|||+.|+|+||||.....
T Consensus       227 ------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          227 ------------EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             ------------HHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             ------------HHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence                        34567788889998888889999999999999999999999999999999999986543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-43  Score=358.38  Aligned_cols=253  Identities=26%  Similarity=0.457  Sum_probs=188.7

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||+|+++.+|+.||||++++..   ......+.+|+.++..+ +||||+++++++++....+  
T Consensus         7 ~y~~-~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~--   82 (318)
T 1fot_A            7 DFQI-LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIF--   82 (318)
T ss_dssp             GEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEE--
T ss_pred             HcEE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEE--
Confidence            4554 478999999999999999999999999996531   23456678899999886 6999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+....-...+.                
T Consensus        83 -lv------~e~~~-----------------g-g--------------~L~~~l~~~~~~~~~~----------------  107 (318)
T 1fot_A           83 -MI------MDYIE-----------------G-G--------------ELFSLLRKSQRFPNPV----------------  107 (318)
T ss_dssp             -EE------ECCCC-----------------S-C--------------BHHHHHHHTSSCCHHH----------------
T ss_pred             -EE------EeCCC-----------------C-C--------------CHHHHHHHcCCCCHHH----------------
Confidence             11      11110                 0 0              0000000000000000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                       ++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       108 -~~------------------------~~~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~g~~kL~Dfg~a~  154 (318)
T 1fot_A          108 -AK------------------------FYAAE---VCLALEYLH--SKDIIYRDLKPENILLD---KNGHIKITDFGFAK  154 (318)
T ss_dssp             -HH------------------------HHHHH---HHHHHHHHH--TTTEECCCCCGGGEEEC---TTSCEEECCCSSCE
T ss_pred             -HH------------------------HHHHH---HHHHHHHHH--HCCccccCCChheEEEc---CCCCEEEeecCcce
Confidence             00                        02333   667788888  99999999999999994   45679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ....           ...+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+          
T Consensus       155 ~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~----------  207 (318)
T 1fot_A          155 YVPD-----------VTYTLCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDSN----------  207 (318)
T ss_dssp             ECSS-----------CBCCCCSCTTTCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----------
T ss_pred             ecCC-----------ccccccCCccccCHhHhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCC----------
Confidence            5421           1246799999999999863      568999999999999999999999998753          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                           ...++..|..+.+.+|.    .+++++++||++||.+||.+|+     +++|+++||||....+
T Consensus       208 -----~~~~~~~i~~~~~~~p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          208 -----TMKTYEKILNAELRFPP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             -----HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             -----HHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCH
Confidence                 34467788888888875    5899999999999999999999     8999999999987665

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.8e-43  Score=363.23  Aligned_cols=266  Identities=24%  Similarity=0.370  Sum_probs=190.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||.||+|+++.+++.||||++.+....   ....+.+|+.++.++.+|||||+++++|++....+  
T Consensus        10 ~y~~-~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~--   86 (345)
T 3a8x_A           10 DFDL-LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF--   86 (345)
T ss_dssp             GEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE--
T ss_pred             heEE-EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE--
Confidence            4554 47899999999999999999999999999764322   23457789999988768999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+.....+..+..               
T Consensus        87 -lv------~e~~~-----------------g-g--------------~L~~~l~~~~~l~~~~~---------------  112 (345)
T 3a8x_A           87 -FV------IEYVN-----------------G-G--------------DLMFHMQRQRKLPEEHA---------------  112 (345)
T ss_dssp             -EE------ECCCC-----------------S-C--------------BHHHHHHHHSSCCHHHH---------------
T ss_pred             -EE------EeCCC-----------------C-C--------------cHHHHHHHcCCCCHHHH---------------
Confidence             11      11110                 0 0              00000000000000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                        +                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       113 --~------------------------~~~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~g~~kL~DFG~a~  158 (345)
T 3a8x_A          113 --R------------------------FYSAE---ISLALNYLH--ERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCK  158 (345)
T ss_dssp             --H------------------------HHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCGGGCB
T ss_pred             --H------------------------HHHHH---HHHHHHHHH--HCCceecCCCHHHEEEC---CCCCEEEEeccccc
Confidence              0                        02333   667788888  99999999999999994   45679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+....+...    
T Consensus       159 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----  220 (345)
T 3a8x_A          159 EGLRPG--------DTTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD----  220 (345)
T ss_dssp             CSCCTT--------CCBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------
T ss_pred             cccCCC--------CcccccCCCccccCccccCC------CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc----
Confidence            532211        12357799999999999963      578999999999999999999999997532211000    


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH------HHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta------~e~l~Hpw~~~~~~  428 (539)
                        ......++..|..+.+.+|.    .++.++++||.+||.+||.+||++      +|+++||||....|
T Consensus       221 --~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          221 --QNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             ----CHHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             --cccHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence              01234567778888888875    589999999999999999999996      79999999988765

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6.4e-44  Score=374.51  Aligned_cols=264  Identities=27%  Similarity=0.454  Sum_probs=188.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.||+|+++.+++.||||++.+..   ......+.+|+.++..+ +|||||+++++|++....+ 
T Consensus        69 ~~y~~-~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~-  145 (410)
T 3v8s_A           69 EDYEV-VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLY-  145 (410)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE-
T ss_pred             cccEE-EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE-
Confidence            34554 478999999999999999999999999996521   12234577899999886 6999999999998765443 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+...  .-||.               
T Consensus       146 --lV------~E~~~-----------------g-g--------------~L~~~l~~~--~~~e~---------------  168 (410)
T 3v8s_A          146 --MV------MEYMP-----------------G-G--------------DLVNLMSNY--DVPEK---------------  168 (410)
T ss_dssp             --EE------ECCCT-----------------T-E--------------EHHHHHHHC--CCCHH---------------
T ss_pred             --EE------EeCCC-----------------C-C--------------cHHHHHHcC--CCCHH---------------
Confidence              11      12110                 0 0              000000000  00000               


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                         |.                      ..+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       169 ---~~----------------------~~~~~q---i~~aL~~LH--~~givHrDLKp~NILl~---~~g~ikL~DFG~a  215 (410)
T 3v8s_A          169 ---WA----------------------RFYTAE---VVLALDAIH--SMGFIHRDVKPDNMLLD---KSGHLKLADFGTC  215 (410)
T ss_dssp             ---HH----------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             ---HH----------------------HHHHHH---HHHHHHHHH--HCCeEeccCCHHHeeEC---CCCCEEEecccee
Confidence               00                      002333   667788888  99999999999999994   4567999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.......       ....+.|||+.|+|||++....+  ...|+.++|||||||++|+|++|.+||.+.+         
T Consensus       216 ~~~~~~~~-------~~~~~~~gt~~Y~APE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---------  277 (410)
T 3v8s_A          216 MKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADS---------  277 (410)
T ss_dssp             EECCTTSE-------EECCSCCSCGGGCCHHHHHTTTT--TCEEETHHHHHHHHHHHHHHHHSSCTTCCSS---------
T ss_pred             EeeccCCc-------ccccCCcCCccccCHHHhhccCC--CcCCCCcceEecchHHHHHHHhCCCCCCCCC---------
Confidence            75432211       11346799999999999974110  1128899999999999999999999998754         


Q ss_pred             ccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCCC
Q psy16343        364 ETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~~  429 (539)
                            ...++..|..+.  +.+|.  +..+|+++++||.+||+.+|.+  |++++|+++||||.+..|.
T Consensus       278 ------~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          278 ------LVGTYSKIMNHKNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             ------HHHHHHHHHTHHHHCCCCT--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             ------hhhHHHHHHhccccccCCC--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence                  234666776554  44543  4679999999999999999999  9999999999999987664

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-43  Score=361.21  Aligned_cols=262  Identities=28%  Similarity=0.495  Sum_probs=196.8

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||+|++... ......+.+|++++..+ +||||+++++++++....+  
T Consensus         3 ~~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~--   77 (321)
T 1tki_A            3 LYEKYMI-AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIA-RHRNILHLHESFESMEELV--   77 (321)
T ss_dssp             CTTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEE--
T ss_pred             hhhceEe-eeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEE--
Confidence            5667776 57899999999999999999999999999643 23345678999999987 5999999999997765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+....               ..++ ..
T Consensus        78 -lv------~e~~~-----------------g-~--------------~L~~~l~~~~---------------~~~~-~~  102 (321)
T 1tki_A           78 -MI------FEFIS-----------------G-L--------------DIFERINTSA---------------FELN-ER  102 (321)
T ss_dssp             -EE------ECCCC-----------------C-C--------------BHHHHHTSSS---------------CCCC-HH
T ss_pred             -EE------EEeCC-----------------C-C--------------CHHHHHHhcC---------------CCCC-HH
Confidence             11      11110                 0 0              0100000000               0000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      ++|.                        +..|   ++.++.|+|  ++||+||||||+|||+... ..+.+||+|||+++
T Consensus       103 ~~~~------------------------i~~q---i~~al~~lH--~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~  152 (321)
T 1tki_A          103 EIVS------------------------YVHQ---VCEALQFLH--SHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQAR  152 (321)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEESSS-SCCCEEECCCTTCE
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--HCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCe
Confidence            1110                        3334   677888888  9999999999999999653 24679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......         .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+          
T Consensus       153 ~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~----------  207 (321)
T 1tki_A          153 QLKPGD---------NFRLLFTAPEYYAPEVHQH------DVVSTATDMWSLGTLVYVLLSGINPFLAET----------  207 (321)
T ss_dssp             ECCTTC---------EEEEEESCGGGSCHHHHTT------CEECHHHHHHHHHHHHHHHHHSSCTTCCSS----------
T ss_pred             ECCCCC---------ccccccCChhhcCcHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCcCCC----------
Confidence            553221         2345689999999999863      457899999999999999999999998753          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           ...+...+..+.+.++...|..+|+++++||.+||..||.+|||++|+|+||||...
T Consensus       208 -----~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          208 -----NQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             -----HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             -----HHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence                 344677888888888887888999999999999999999999999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-43  Score=363.59  Aligned_cols=268  Identities=31%  Similarity=0.561  Sum_probs=199.7

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      ...+.+.|++ .+.||+|+||.||+|.+..+++.||+|++.+........+.+|+++|..+ +|||||++++++++....
T Consensus        46 ~~~~~~~y~i-~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~  123 (387)
T 1kob_A           46 QGSVYDYYDI-LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEM  123 (387)
T ss_dssp             CSCGGGTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEE
T ss_pred             CCccccceEE-EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEE
Confidence            4456677886 57899999999999999999999999999764433455788999999987 599999999999775443


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|                       .++--+ +              .+...+....+.-+|              
T Consensus       124 ~---lv-----------------------~E~~~g-g--------------~L~~~l~~~~~~l~~--------------  148 (387)
T 1kob_A          124 V---LI-----------------------LEFLSG-G--------------ELFDRIAAEDYKMSE--------------  148 (387)
T ss_dssp             E---EE-----------------------EECCCC-C--------------BHHHHTTCTTCCBCH--------------
T ss_pred             E---EE-----------------------EEcCCC-C--------------cHHHHHHhhcCCCCH--------------
Confidence            2   11                       111000 0              000000000000000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                        .+++.                        +..|   ++.++.|+|  ++||+||||||+|||+... ..+.+||+|||
T Consensus       149 --~~~~~------------------------i~~q---i~~aL~~LH--~~givHrDlkp~NIll~~~-~~~~vkL~DFG  196 (387)
T 1kob_A          149 --AEVIN------------------------YMRQ---ACEGLKHMH--EHSIVHLDIKPENIMCETK-KASSVKIIDFG  196 (387)
T ss_dssp             --HHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEESST-TCCCEEECCCT
T ss_pred             --HHHHH------------------------HHHH---HHHHHHHHH--hCCeeecccchHHeEEecC-CCCceEEEecc
Confidence              00000                        3334   677888888  9999999999999999642 33569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++......         .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+       
T Consensus       197 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~-------  254 (387)
T 1kob_A          197 LATKLNPDE---------IVKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGED-------  254 (387)
T ss_dssp             TCEECCTTS---------CEEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-------
T ss_pred             cceecCCCc---------ceeeeccCCCccCchhccC------CCCCCcccEeeHhHHHHHHHhCCCCCCCCC-------
Confidence            987553221         2335689999999999863      468999999999999999999999998753       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                              .......+..+.+.++...|..+++++++||.+||..||.+|||++|+|+||||.....
T Consensus       255 --------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          255 --------DLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             --------HHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             --------HHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence                    23456778888888888888899999999999999999999999999999999986543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2.1e-43  Score=380.06  Aligned_cols=264  Identities=34%  Similarity=0.661  Sum_probs=197.6

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .+.+.+.|++ .+.||+|+||.||+|++..++..||||++.+..  ......+.+|+.+++.+ +|||||+++++|++..
T Consensus        32 ~~~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  109 (494)
T 3lij_A           32 KGHLSEMYQR-VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKR  109 (494)
T ss_dssp             BCCHHHHEEE-EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             CCchhcCeEE-eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCC
Confidence            4457778886 578999999999999999999999999997542  23356788999999987 6999999999998765


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|                       .++.-+ +              .+...+..          .      ..
T Consensus       110 ~~~---lv-----------------------~e~~~~-g--------------~L~~~~~~----------~------~~  132 (494)
T 3lij_A          110 NYY---LV-----------------------MECYKG-G--------------ELFDEIIH----------R------MK  132 (494)
T ss_dssp             EEE---EE-----------------------EECCCS-C--------------BHHHHHHH----------H------SS
T ss_pred             EEE---EE-----------------------EecCCC-C--------------cHHHHHHH----------c------CC
Confidence            433   11                       111000 0              00000000          0      00


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      ++ ..+++                        .+.++   ++.++.|+|  ++||+||||||+|||+...+..+.+||+|
T Consensus       133 ~~-~~~~~------------------------~i~~q---i~~~l~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  182 (494)
T 3lij_A          133 FN-EVDAA------------------------VIIKQ---VLSGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVD  182 (494)
T ss_dssp             CC-HHHHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             CC-HHHHH------------------------HHHHH---HHHHHHHHH--HCCceeccCChhhEEEeCCCCCCcEEEEE
Confidence            00 00010                        03334   677888888  99999999999999997655566799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+++......         ...+.+||+.|+|||++.       ..|+.++|||||||++|+|++|.+||.+.+     
T Consensus       183 fG~a~~~~~~~---------~~~~~~gt~~y~aPE~l~-------~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----  241 (494)
T 3lij_A          183 FGLSAVFENQK---------KMKERLGTAYYIAPEVLR-------KKYDEKCDVWSIGVILFILLAGYPPFGGQT-----  241 (494)
T ss_dssp             CTTCEECBTTB---------CBCCCCSCTTTCCHHHHT-------TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----
T ss_pred             CCCCeECCCCc---------cccccCCCcCeeCHHHHc-------ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-----
Confidence            99987543221         234678999999999985       358999999999999999999999998753     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                ...+...+..+.+.++...|..+|+++++||++||+.||.+|||++|+|+||||..
T Consensus       242 ----------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          242 ----------DQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             ----------HHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             ----------HHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence                      34577888999999998899999999999999999999999999999999999975

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=9.3e-43  Score=358.50  Aligned_cols=266  Identities=33%  Similarity=0.625  Sum_probs=184.4

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+++.||||++.+..  ....+.+|++++.++ +||||+++++++.+....+
T Consensus        49 ~~~~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~  124 (349)
T 2w4o_A           49 DALSDFFEV-ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEIS  124 (349)
T ss_dssp             SCGGGTEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             ccccCcEEE-eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEE
Confidence            346677876 578999999999999999999999999997532  245677899999997 5999999999997654332


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+-                 + +              .+...+.....+.++               
T Consensus       125 ---lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~---------------  148 (349)
T 2w4o_A          125 ---LV------LELVT-----------------G-G--------------ELFDRIVEKGYYSER---------------  148 (349)
T ss_dssp             ---EE------ECCCC-----------------S-C--------------BHHHHHTTCSSCCHH---------------
T ss_pred             ---EE------EEeCC-----------------C-C--------------CHHHHHHhcCCCCHH---------------
Confidence               11      11110                 0 0              000000000001100               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        +++.                        +..+   ++.++.|+|  ++||+||||||+|||+...+..+.+||+|||+
T Consensus       149 --~~~~------------------------i~~q---i~~~L~~LH--~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~  197 (349)
T 2w4o_A          149 --DAAD------------------------AVKQ---ILEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGL  197 (349)
T ss_dssp             --HHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred             --HHHH------------------------HHHH---HHHHHHHHH--HCCeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence              0110                        2334   667788888  99999999999999997644567899999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+...       
T Consensus       198 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------  255 (349)
T 2w4o_A          198 SKIVEHQV---------LMKTVCGTPGYCAPEILRG------CAYGPEVDMWSVGIITYILLCGFEPFYDERG-------  255 (349)
T ss_dssp             ------------------------CGGGSCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-------
T ss_pred             ccccCccc---------ccccccCCCCccCHHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCcc-------
Confidence            87543221         2245789999999999863      4689999999999999999999999976532       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                             ...++..+..+.+.++...|..++.++++||.+||..||++|||++|+|+||||.....
T Consensus       256 -------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          256 -------DQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             -------HHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred             -------cHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence                   23466778888888887788899999999999999999999999999999999986543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.7e-43  Score=374.07  Aligned_cols=268  Identities=26%  Similarity=0.424  Sum_probs=189.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.||+|+++.+++.||||++++..   ......+.+|+.++..+ +|||||+++++|++....+ 
T Consensus        74 ~~y~~-~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~-  150 (437)
T 4aw2_A           74 EDFEI-LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLY-  150 (437)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEE-
T ss_pred             hheEE-EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEE-
Confidence            45665 578999999999999999999999999996521   11223477899999886 6999999999998765443 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~  202 (539)
                        .|      +|.+.                 + +              .+...+... .-+..+..             
T Consensus       151 --lV------~Ey~~-----------------g-g--------------~L~~~l~~~~~~l~e~~~-------------  177 (437)
T 4aw2_A          151 --LV------MDYYV-----------------G-G--------------DLLTLLSKFEDRLPEEMA-------------  177 (437)
T ss_dssp             --EE------ECCCT-----------------T-C--------------BHHHHHHTTTTCCCHHHH-------------
T ss_pred             --EE------EecCC-----------------C-C--------------cHHHHHHHccCCCCHHHH-------------
Confidence              11      12111                 0 0              010000000 00000000             


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                  ..|..+   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+
T Consensus       178 ----------------------------~~~~~q---i~~aL~~LH--~~giiHrDLKp~NILl~---~~g~vkL~DFGl  221 (437)
T 4aw2_A          178 ----------------------------RFYLAE---MVIAIDSVH--QLHYVHRDIKPDNILMD---MNGHIRLADFGS  221 (437)
T ss_dssp             ----------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             ----------------------------HHHHHH---HHHHHHHHH--hCCeEecccCHHHeeEc---CCCCEEEcchhh
Confidence                                        003334   667788888  99999999999999994   456799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |+.......       ....+.|||+.|+|||++..... ....|+.++|||||||++|+|++|++||.+.+        
T Consensus       222 a~~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~-~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~--------  285 (437)
T 4aw2_A          222 CLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEG-GKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------  285 (437)
T ss_dssp             CEECCTTSC-------EECCSCCSCGGGCCHHHHHHHHT-SCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------
T ss_pred             hhhcccCCC-------cccccccCCcCeeChHHHhhccc-CCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC--------
Confidence            975432221       11235799999999999963111 02358999999999999999999999998754        


Q ss_pred             CccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccC--CCCHHHHhcCCCccCCCCCC
Q psy16343        363 GETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWISTAGTAH  430 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~--R~ta~e~l~Hpw~~~~~~~~  430 (539)
                             ...++..|...  .+.+|.. +..+|++++|||++||+.+|++  |++++|+++||||.+.+|..
T Consensus       286 -------~~~~~~~i~~~~~~~~~p~~-~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          286 -------LVETYGKIMNHKERFQFPTQ-VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             -------HHHHHHHHHTHHHHCCCCSS-CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             -------hhHHHHhhhhccccccCCcc-cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence                   23355566543  3555542 3568999999999999999999  99999999999999888754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=8.9e-43  Score=358.76  Aligned_cols=255  Identities=27%  Similarity=0.470  Sum_probs=191.3

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      -+.|++ .+.||+|+||.||+|++..+|+.||||++++..   ......+.+|+.++..+ +||||+++++++.+....+
T Consensus        40 ~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           40 LDQFDR-IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             GGGEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             HHHCEE-EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEE
Confidence            345665 578999999999999999999999999996431   23456788999999887 6999999999998765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++.-+ +              .+...+....-+..+               
T Consensus       118 ---lv-----------------------~e~~~g-g--------------~L~~~l~~~~~~~~~---------------  141 (350)
T 1rdq_E          118 ---MV-----------------------MEYVAG-G--------------EMFSHLRRIGRFSEP---------------  141 (350)
T ss_dssp             ---EE-----------------------EECCTT-C--------------BHHHHHHHHCCCCHH---------------
T ss_pred             ---EE-----------------------EcCCCC-C--------------cHHHHHHHcCCCCHH---------------
Confidence               11                       111000 0              000000000000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       142 --~~~------------------------~~~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~g~~kL~DFg~  187 (350)
T 1rdq_E          142 --HAR------------------------FYAAQ---IVLTFEYLH--SLDLIYRDLKPENLLID---QQGYIQVTDFGF  187 (350)
T ss_dssp             --HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             --HHH------------------------HHHHH---HHHHHHHHH--HCCcccccCccceEEEC---CCCCEEEccccc
Confidence              000                        02333   667788888  99999999999999994   456799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.....           ..+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+        
T Consensus       188 a~~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------  242 (350)
T 1rdq_E          188 AKRVKGR-----------TWTLCGTPEALAPEIILS------KGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------  242 (350)
T ss_dssp             CEECSSC-----------BCCCEECGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------
T ss_pred             ceeccCC-----------cccccCCccccCHHHhcC------CCCCCcCCEecccHhHhHHhhCCCCCCCCC--------
Confidence            8754321           236799999999999863      568999999999999999999999998753        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                             ...++..|..+.+.+|.    .+++++++||.+||.+||.+||+     ++|+++||||....+
T Consensus       243 -------~~~~~~~i~~~~~~~p~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          243 -------PIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             -------HHHHHHHHHHCCCCCCT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             -------HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence                   34577888888888875    58999999999999999999998     999999999987665

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.6e-43  Score=365.68  Aligned_cols=258  Identities=26%  Similarity=0.410  Sum_probs=182.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.||+|+++.+++.||||++++...   .....+.+|..++.+..+|||||+++++|++....+ 
T Consensus        38 ~~y~~-~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~-  115 (373)
T 2r5t_A           38 SDFHF-LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY-  115 (373)
T ss_dssp             GGEEE-EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE-
T ss_pred             hheEE-EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE-
Confidence            44655 5789999999999999999999999999975432   223456677776544457999999999998765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .+|--+ +              .+...+...                ..+.. 
T Consensus       116 --lv-----------------------~E~~~g-g--------------~L~~~l~~~----------------~~~~~-  138 (373)
T 2r5t_A          116 --FV-----------------------LDYING-G--------------ELFYHLQRE----------------RCFLE-  138 (373)
T ss_dssp             --EE-----------------------EECCCS-C--------------BHHHHHHHH----------------SSCCH-
T ss_pred             --EE-----------------------EeCCCC-C--------------cHHHHHHhc----------------CCCCH-
Confidence              11                       111001 0              000000000                00000 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       139 ~~~~------------------------~~~~q---i~~aL~~LH--~~givHrDlkp~NIll~---~~g~ikL~DFG~a  186 (373)
T 2r5t_A          139 PRAR------------------------FYAAE---IASALGYLH--SLNIVYRDLKPENILLD---SQGHIVLTDFGLC  186 (373)
T ss_dssp             HHHH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEECCCCBC
T ss_pred             HHHH------------------------HHHHH---HHHHHHHHH--HCCceecCCCHHHEEEC---CCCCEEEeeCccc
Confidence            0000                        02333   667788888  99999999999999994   4567999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......        ....+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+         
T Consensus       187 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~---------  243 (373)
T 2r5t_A          187 KENIEHN--------STTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---------  243 (373)
T ss_dssp             GGGBCCC--------CCCCSBSCCCCCCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCSB---------
T ss_pred             cccccCC--------CccccccCCccccCHHHhCC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCC---------
Confidence            7532211        12357899999999999963      579999999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH----HHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA----ASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta----~e~l~Hpw~~~~~~  428 (539)
                            ...++..|..+.+.+|.    .++.++++||.+||++||.+|+++    +++++||||....|
T Consensus       244 ------~~~~~~~i~~~~~~~~~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w  302 (373)
T 2r5t_A          244 ------TAEMYDNILNKPLQLKP----NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW  302 (373)
T ss_dssp             ------HHHHHHHHHHSCCCCCS----SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCH
T ss_pred             ------HHHHHHHHHhcccCCCC----CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCH
Confidence                  34577888888887774    689999999999999999999986    69999999998766

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=8.6e-43  Score=371.69  Aligned_cols=292  Identities=22%  Similarity=0.352  Sum_probs=170.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.|++ .+.||+|+||+||+|++..+++.||||++.+...  ....++.+|+++|.++ +|||||++++++......
T Consensus        50 ~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  127 (458)
T 3rp9_A           50 QIPDRYEI-RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVE  127 (458)
T ss_dssp             CSCTTEEE-CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTT
T ss_pred             ccCCCeEE-eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcc
Confidence            35577886 5789999999999999999999999999965322  2245688999999997 699999999998543211


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .           ...+.+          +.++  ..+              .+...+.....+..+.             
T Consensus       128 ~-----------~~~~~l----------v~e~--~~~--------------~L~~~~~~~~~l~~~~-------------  157 (458)
T 3rp9_A          128 K-----------FDELYV----------VLEI--ADS--------------DFKKLFRTPVYLTELH-------------  157 (458)
T ss_dssp             T-----------CCCEEE----------EECC--CSE--------------EHHHHHHSSCCCCHHH-------------
T ss_pred             c-----------CceEEE----------EEec--ccc--------------chhhhcccCCCCCHHH-------------
Confidence            1           001111          1111  000              0000000000000000             


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                             +-.                     +..|   ++.++.|+|  ++|||||||||+|||+.   ..+.+||+|||
T Consensus       158 -------~~~---------------------~~~q---i~~aL~~LH--~~~iiHrDlKp~NILl~---~~~~~kl~DFG  201 (458)
T 3rp9_A          158 -------IKT---------------------LLYN---LLVGVKYVH--SAGILHRDLKPANCLVN---QDCSVKVCDFG  201 (458)
T ss_dssp             -------HHH---------------------HHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTCCEEECCCT
T ss_pred             -------HHH---------------------HHHH---HHHHHHHHH--hCCcCCCCCChhhEEEC---CCCCEeecccc
Confidence                   001                     3334   677888888  99999999999999994   44679999999


Q ss_pred             CccccccCCCCCCC-------------------CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHH
Q psy16343        282 LGSGIKFNTSVHSP-------------------LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYI  342 (539)
Q Consensus       282 la~~~~~~~~~~~~-------------------~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~  342 (539)
                      +|+...........                   .....+.+.+||++|+|||++..     ...|+.++||||||||+|+
T Consensus       202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~~~DiwSlG~il~e  276 (458)
T 3rp9_A          202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL-----QENYTEAIDVWSIGCIFAE  276 (458)
T ss_dssp             TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT-----CCCCCTHHHHHHHHHHHHH
T ss_pred             cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC-----CCCCCcHhHHHHHHHHHHH
Confidence            99865432210000                   00113456799999999998752     3469999999999999999


Q ss_pred             HHh-----------CCCCCCCCCCCCCCcccC-------cc--chhhHHHHHHHHhcCC----------------CCCC-
Q psy16343        343 LLC-----------GYPPFYGNCGEDCGWQRG-------ET--CHACQEILFHSIQQGH----------------YDFP-  385 (539)
Q Consensus       343 ll~-----------G~~PF~~~~~~~~~~~~~-------~~--~~~~~~~~~~~i~~~~----------------~~~p-  385 (539)
                      |++           |.+||.|.+.........       ..  .......++..+....                -.++ 
T Consensus       277 lltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  356 (458)
T 3rp9_A          277 LLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPK  356 (458)
T ss_dssp             HHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCC
T ss_pred             HHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCC
Confidence            998           778887754211000000       00  0000000110000000                0011 


Q ss_pred             ------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        386 ------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       386 ------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                            ...|+.++++++|||++||++||.+|||++|+|+||||....+
T Consensus       357 ~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          357 REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence                  1234567999999999999999999999999999999987654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.5e-42  Score=361.09  Aligned_cols=262  Identities=26%  Similarity=0.426  Sum_probs=192.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|+++|..+ +|||||+++++|.+....+ 
T Consensus        15 ~~y~i-~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~-   91 (384)
T 4fr4_A           15 DHFEI-LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMF-   91 (384)
T ss_dssp             GGEEE-EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             HHeEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEE-
Confidence            45665 578999999999999999999999999996421   23456788999999987 6999999999998765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+.                 + +              .+...+.....+..+.               
T Consensus        92 --lv------~e~~~-----------------g-g--------------~L~~~l~~~~~l~~~~---------------  116 (384)
T 4fr4_A           92 --MV------VDLLL-----------------G-G--------------DLRYHLQQNVHFKEET---------------  116 (384)
T ss_dssp             --EE------ECCCT-----------------T-E--------------EHHHHHHTTCCCCHHH---------------
T ss_pred             --EE------EecCC-----------------C-C--------------cHHHHHHhcCCCCHHH---------------
Confidence              11      11110                 0 0              0000000000000000               


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                        ++                        .|..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       117 --~~------------------------~~~~q---i~~aL~~LH--~~givHrDlkp~NIll~---~~g~vkL~DFG~a  162 (384)
T 4fr4_A          117 --VK------------------------LFICE---LVMALDYLQ--NQRIIHRDMKPDNILLD---EHGHVHITDFNIA  162 (384)
T ss_dssp             --HH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             --HH------------------------HHHHH---HHHHHHHHH--HCCceeccCcHHHeEEC---CCCCEEEecccee
Confidence              00                        02333   667788888  99999999999999994   4567999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         ...+.+||+.|+|||++...   ...+|+.++|||||||++|+|++|.+||.+.....      
T Consensus       163 ~~~~~~~---------~~~~~~gt~~Y~aPE~~~~~---~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------  224 (384)
T 4fr4_A          163 AMLPRET---------QITTMAGTKPYMAPEMFSSR---KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS------  224 (384)
T ss_dssp             EECCTTC---------CBCCCCSCGGGCCGGGTCCC---SSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC------
T ss_pred             eeccCCC---------ceeccCCCccccCCeeeccC---CCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc------
Confidence            7543221         24578999999999998631   12468999999999999999999999998654322      


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-HHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-AASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-a~e~l~Hpw~~~~~~  428 (539)
                            ...+...+....+.+|.    .+++++++||.+||.+||.+||+ ++++++||||....|
T Consensus       225 ------~~~~~~~~~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          225 ------SKEIVHTFETTVVTYPS----AWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             ------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             ------HHHHHHHHhhcccCCCC----cCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence                  34466677777777774    58999999999999999999998 899999999987765

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=3.4e-42  Score=350.88  Aligned_cols=272  Identities=30%  Similarity=0.512  Sum_probs=199.0

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ..|.+.|.+.++.||+|+||.||+|.+..+++.||||++.+..  ......+.+|+.++..+.+||||+++++++++...
T Consensus        24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~  103 (327)
T 3lm5_A           24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE  103 (327)
T ss_dssp             HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence            3477888877689999999999999999999999999996532  23456788999999998889999999999977654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|                       .+|--+ +              .+...+..      + .       ....
T Consensus       104 ~~---lv-----------------------~e~~~~-~--------------~L~~~~~~------~-~-------~~~~  128 (327)
T 3lm5_A          104 II---LI-----------------------LEYAAG-G--------------EIFSLCLP------E-L-------AEMV  128 (327)
T ss_dssp             EE---EE-----------------------EECCTT-E--------------EGGGGGSS------C-C--------CCC
T ss_pred             EE---EE-----------------------EEecCC-C--------------cHHHHHHH------h-c-------ccCC
Confidence            33   11                       111000 0              00000000      0 0       0000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+......+.+||+||
T Consensus       129 ~-~~~~~~------------------------i~~q---l~~~L~~LH--~~givH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A          129 S-ENDVIR------------------------LIKQ---ILEGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             C-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             C-HHHHHH------------------------HHHH---HHHHHHHHH--HCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence            0 000110                        3334   667788888  999999999999999965434567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+++......         .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+      
T Consensus       179 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~------  237 (327)
T 3lm5_A          179 GMSRKIGHAC---------ELREIMGTPEYLAPEILNY------DPITTATDMWNIGIIAYMLLTHTSPFVGED------  237 (327)
T ss_dssp             GGCEEC------------------CCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------
T ss_pred             ccccccCCcc---------ccccccCCcCccCCeeecC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC------
Confidence            9987543221         1235689999999999863      468899999999999999999999998753      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                               .......+......++...+..+++++++||.+||..||.+|||++|+|+||||....+.
T Consensus       238 ---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~  297 (327)
T 3lm5_A          238 ---------NQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE  297 (327)
T ss_dssp             ---------HHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTT
T ss_pred             ---------chHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccc
Confidence                     233556677777777877788899999999999999999999999999999999876553

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.7e-42  Score=365.42  Aligned_cols=266  Identities=29%  Similarity=0.545  Sum_probs=186.2

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--------CCHHHHHHHHHHHHhhcCCCCeeeeeeee
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--------HSRSRVFKEVETFHHCQGHPNIIQLLEYY  115 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~  115 (539)
                      .+.+.|.+ .+.||+|+||.||+|.+..+++.||||++.+...        .....+.+|+++|.++ +|||||++++++
T Consensus       132 ~~~~~y~~-~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~  209 (419)
T 3i6u_A          132 ALRDEYIM-SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF  209 (419)
T ss_dssp             HHHTTEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEE
T ss_pred             hhhccEEE-EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            34566775 5789999999999999999999999999964311        1122477899999997 699999999998


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      ..... +   .|                       .+|--+ +              .+...+.....+..+        
T Consensus       210 ~~~~~-~---lv-----------------------~e~~~~-g--------------~L~~~l~~~~~~~~~--------  239 (419)
T 3i6u_A          210 DAEDY-Y---IV-----------------------LELMEG-G--------------ELFDKVVGNKRLKEA--------  239 (419)
T ss_dssp             ESSEE-E---EE-----------------------EECCTT-C--------------BGGGGTSSSCCCCHH--------
T ss_pred             ecCce-E---EE-----------------------EEcCCC-C--------------cHHHHHhccCCCCHH--------
Confidence            65432 1   11                       111000 0              010100000000000        


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                               .++   .                     +..|   ++.++.|+|  ++||+||||||+|||+...+....+
T Consensus       240 ---------~~~---~---------------------i~~q---i~~~l~~LH--~~~ivHrDlkp~NIll~~~~~~~~~  281 (419)
T 3i6u_A          240 ---------TCK---L---------------------YFYQ---MLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLI  281 (419)
T ss_dssp             ---------HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEESSSSSSCCE
T ss_pred             ---------HHH---H---------------------HHHH---HHHHHHHHH--HCCccccCCChHhEEEecCCCcceE
Confidence                     000   1                     2333   667788888  9999999999999999766555679


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||+++......         ...+.+||+.|+|||++...   ....|+.++|||||||++|+|++|.+||.+...
T Consensus       282 kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~  349 (419)
T 3i6u_A          282 KITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT  349 (419)
T ss_dssp             EECCSSTTTSCC--------------------CTTCCTTTTC-------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred             EEeecccceecCCCc---------cccccCCCCCccCceeeecC---CCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence            999999997653221         23467999999999998531   124688999999999999999999999986532


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ..              .+...+..+.+.++...|..+++++++||.+||..||.+|||++|+|+||||+.
T Consensus       350 ~~--------------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          350 QV--------------SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             SC--------------CHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             hH--------------HHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            21              245667788888877778889999999999999999999999999999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.3e-42  Score=347.40  Aligned_cols=260  Identities=26%  Similarity=0.385  Sum_probs=187.2

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      ...+.|++ .+.||+|+||.||+|.+..+++.||||++..........+.+|+.++..+ +||||++++++|.++...+ 
T Consensus        17 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~-   93 (297)
T 3fxz_A           17 DPKKKYTR-FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW-   93 (297)
T ss_dssp             CGGGTBCC-CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE-
T ss_pred             Chhhceee-eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEE-
Confidence            35666775 57899999999999999999999999999755555567788999999986 6999999999987654432 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .+|.-+ +              .+...+.. ..+.++                
T Consensus        94 --lv-----------------------~e~~~~-~--------------~L~~~~~~-~~~~~~----------------  116 (297)
T 3fxz_A           94 --VV-----------------------MEYLAG-G--------------SLTDVVTE-TCMDEG----------------  116 (297)
T ss_dssp             --EE-----------------------EECCTT-C--------------BHHHHHHH-SCCCHH----------------
T ss_pred             --EE-----------------------EECCCC-C--------------CHHHHHhh-cCCCHH----------------
Confidence              11                       111000 0              00000000 000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++                        .+.++   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       117 -~~~------------------------~~~~q---i~~~l~~lH--~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~  163 (297)
T 3fxz_A          117 -QIA------------------------AVCRE---CLQALEFLH--SNQVIHRDIKSDNILLG---MDGSVKLTDFGFC  163 (297)
T ss_dssp             -HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             -HHH------------------------HHHHH---HHHHHHHHH--hCCceeCCCCHHHEEEC---CCCCEEEeeCCCc
Confidence             011                        03334   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........        ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+.        
T Consensus       164 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------  221 (297)
T 3fxz_A          164 AQITPEQS--------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------  221 (297)
T ss_dssp             EECCSTTC--------CBCCCCSCGGGCCHHHHHC------SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------
T ss_pred             eecCCccc--------ccCCccCCcCccChhhhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------
Confidence            75543221        2346789999999999973      4689999999999999999999999976532        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            ..........+...++.  ...+++++++||.+||..||.+|||++|+|+||||...
T Consensus       222 ------~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          222 ------LRALYLIATNGTPELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             ------HHHHHHHHHHCSCCCSC--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             ------HHHHHHHHhCCCCCCCC--ccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence                  12222233333333322  24689999999999999999999999999999999754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.2e-43  Score=363.45  Aligned_cols=271  Identities=30%  Similarity=0.427  Sum_probs=172.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+|+.||||++.+...  ....++.+|+.++.++.+|||||++++++.......
T Consensus         7 ~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            7 VLRKYEL-VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHTTEEE-EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             ccCceEE-EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            4456765 4679999999999999999999999999964322  234567899999999877999999999986533110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                    +.+          +.++.-+                .+...+.. ....++.              
T Consensus        86 --------------~~l----------v~e~~~~----------------~L~~~~~~-~~~~~~~--------------  110 (388)
T 3oz6_A           86 --------------VYL----------VFDYMET----------------DLHAVIRA-NILEPVH--------------  110 (388)
T ss_dssp             --------------EEE----------EEECCSE----------------EHHHHHHH-TCCCHHH--------------
T ss_pred             --------------EEE----------EecccCc----------------CHHHHHHc-CCCCHHH--------------
Confidence                          000          1111000                00000000 0000000              


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                            .-.                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       111 ------~~~---------------------i~~q---i~~~L~~LH--~~~ivHrDlkp~NIll~---~~~~~kl~DFG~  155 (388)
T 3oz6_A          111 ------KQY---------------------VVYQ---LIKVIKYLH--SGGLLHRDMKPSNILLN---AECHVKVADFGL  155 (388)
T ss_dssp             ------HHH---------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCCTT
T ss_pred             ------HHH---------------------HHHH---HHHHHHHHH--hCCEEeCCCCHHHeEEc---CCCCEEecCCcc
Confidence                  001                     2233   667788888  99999999999999994   446799999999


Q ss_pred             ccccccCCCCCC-------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCC
Q psy16343        283 GSGIKFNTSVHS-------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP  349 (539)
Q Consensus       283 a~~~~~~~~~~~-------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~P  349 (539)
                      |+.+........             ........+.+||++|+|||++.+     ...|+.++||||||||+|+|++|.+|
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~ell~g~~p  230 (388)
T 3oz6_A          156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG-----STKYTKGIDMWSLGCILGEILCGKPI  230 (388)
T ss_dssp             CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC-----CCCCCChhhHHHHHHHHHHHHhCCCC
Confidence            975432110000             001123456799999999999863     24689999999999999999999999


Q ss_pred             CCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCC-------------------------------------------
Q psy16343        350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPE-------------------------------------------  386 (539)
Q Consensus       350 F~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~-------------------------------------------  386 (539)
                      |.+.+..+               .+..|.. ...+|.                                           
T Consensus       231 f~~~~~~~---------------~~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (388)
T 3oz6_A          231 FPGSSTMN---------------QLERIIG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK  294 (388)
T ss_dssp             CCCSSHHH---------------HHHHHHH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHH
T ss_pred             CCCCCHHH---------------HHHHHHH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccc
Confidence            98864221               1111110 000000                                           


Q ss_pred             -CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        387 -GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       387 -~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                       ..+..++++++|||.+||+.||.+|||++|+|+||||+...
T Consensus       295 ~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             HCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             ccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence             01236799999999999999999999999999999997643

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.2e-42  Score=386.85  Aligned_cols=256  Identities=24%  Similarity=0.386  Sum_probs=192.8

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      |++ .++||+|+||.||+|+++.+++.||||++++.   .......+..|+.++..+.+||||++++++|++....+   
T Consensus       343 f~~-~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~---  418 (674)
T 3pfq_A          343 FNF-LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY---  418 (674)
T ss_dssp             EEE-EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE---
T ss_pred             eEE-EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE---
Confidence            444 46899999999999999999999999999642   12334567889999988778999999999998765443   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .+|--+ +              .+...+.....+..+                  
T Consensus       419 lV-----------------------~E~~~g-g--------------~L~~~l~~~~~~~~~------------------  442 (674)
T 3pfq_A          419 FV-----------------------MEYVNG-G--------------DLMYHIQQVGRFKEP------------------  442 (674)
T ss_dssp             EE-----------------------EECCCS-C--------------BHHHHHHHHSSCCHH------------------
T ss_pred             EE-----------------------EeCcCC-C--------------cHHHHHHhcCCCCHH------------------
Confidence            11                       111000 0              010000000000000                  


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                           .+                  ..|..|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+|+.
T Consensus       443 -----~~------------------~~~~~q---i~~aL~~LH--~~gIiHrDLKp~NILl~---~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          443 -----HA------------------VFYAAE---IAIGLFFLQ--SKGIIYRDLKLDNVMLD---SEGHIKIADFGMCKE  491 (674)
T ss_dssp             -----HH------------------HHHHHH---HHHHHHHHH--HTSEECCCCCSTTEEEC---SSSCEEECCCTTCEE
T ss_pred             -----HH------------------HHHHHH---HHHHHHHHH--hCCeEeccCChhhEEEc---CCCcEEEeecceeec
Confidence                 00                  013334   677788888  99999999999999994   456799999999975


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .....        ....+.|||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+           
T Consensus       492 ~~~~~--------~~~~~~~GT~~Y~APE~l~~------~~~~~~~DvwSlGvilyelltG~~Pf~~~~-----------  546 (674)
T 3pfq_A          492 NIWDG--------VTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----------  546 (674)
T ss_dssp             CCCTT--------CCBCCCCSCSSSCCHHHHTC------CCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----------
T ss_pred             cccCC--------cccccccCCCcccCHhhhcC------CCCCccceEechHHHHHHHHcCCCCCCCCC-----------
Confidence            32221        12357899999999999963      579999999999999999999999998754           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH-----HHHhcCCCccCCCC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA-----ASVLKHPWISTAGT  428 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta-----~e~l~Hpw~~~~~~  428 (539)
                          ...++..|..+.+.+|.    .+|+++++||++||++||.+||++     +|+++||||...+|
T Consensus       547 ----~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w  606 (674)
T 3pfq_A          547 ----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  606 (674)
T ss_dssp             ----HHHHHHHHHSSCCCCCT----TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCH
T ss_pred             ----HHHHHHHHHhCCCCCCc----cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCH
Confidence                35578889999988885    689999999999999999999997     99999999998776

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=8.6e-43  Score=376.26  Aligned_cols=266  Identities=33%  Similarity=0.582  Sum_probs=198.9

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-------------CCHHHHHHHHHHHHhhcCCCCe
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-------------HSRSRVFKEVETFHHCQGHPNI  108 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-------------~~~~~~~~Ei~~l~~~~~HpnI  108 (539)
                      .+.+.+.|++ .+.||+|+||.||+|.++.++..||||++.+...             .....+.+|+.++..+ +||||
T Consensus        31 ~~~i~~~Y~~-~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpni  108 (504)
T 3q5i_A           31 EGKIGESYFK-VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNI  108 (504)
T ss_dssp             CSCGGGTEEE-EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTB
T ss_pred             CCCcccceEE-EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCC
Confidence            4457778886 5789999999999999999999999999965321             2345788999999997 59999


Q ss_pred             eeeeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccc
Q psy16343        109 IQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI  188 (539)
Q Consensus       109 v~l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~  188 (539)
                      |+++++|++....+   .|                       .++.-+ +              .+...+........+ 
T Consensus       109 v~~~~~~~~~~~~~---lv-----------------------~e~~~g-g--------------~L~~~l~~~~~~~~~-  146 (504)
T 3q5i_A          109 IKLFDVFEDKKYFY---LV-----------------------TEFYEG-G--------------ELFEQIINRHKFDEC-  146 (504)
T ss_dssp             CCEEEEEECSSEEE---EE-----------------------EECCTT-C--------------BHHHHHHHHSCCCHH-
T ss_pred             CeEEEEEEcCCEEE---EE-----------------------EecCCC-C--------------cHHHHHHHcCCCCHH-
Confidence            99999998765433   11                       111000 0              000000000000000 


Q ss_pred             cccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecC
Q psy16343        189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVH  268 (539)
Q Consensus       189 ~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~  268 (539)
                                      +++                        .+.++   ++.++.|+|  ++||+||||||+|||+..
T Consensus       147 ----------------~~~------------------------~i~~q---i~~~l~~lH--~~~ivH~Dlkp~Nil~~~  181 (504)
T 3q5i_A          147 ----------------DAA------------------------NIMKQ---ILSGICYLH--KHNIVHRDIKPENILLEN  181 (504)
T ss_dssp             ----------------HHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEESS
T ss_pred             ----------------HHH------------------------HHHHH---HHHHHHHHH--HCCeEeCCCcHHHEEEec
Confidence                            000                        03344   677888888  999999999999999976


Q ss_pred             CCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCC
Q psy16343        269 PDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP  348 (539)
Q Consensus       269 ~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~  348 (539)
                      .+....+||+|||+++......         ...+.+||+.|+|||++.       ..|+.++|||||||++|+|++|.+
T Consensus       182 ~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~-------~~~~~~~DiwslG~il~~ll~g~~  245 (504)
T 3q5i_A          182 KNSLLNIKIVDFGLSSFFSKDY---------KLRDRLGTAYYIAPEVLK-------KKYNEKCDVWSCGVIMYILLCGYP  245 (504)
T ss_dssp             TTCCSSEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHT-------TCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCccEEEEECCCCEEcCCCC---------ccccccCCcCCCCHHHhc-------cCCCchHHHHHHHHHHHHHHhCCC
Confidence            5554579999999987543221         234678999999999985       258999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       349 PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ||.+.+               ...+...|..+.+.++...|..+|+++++||++||.+||.+|||++|+|+||||....
T Consensus       246 pf~~~~---------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          246 PFGGQN---------------DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             SSCCSS---------------HHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             CCCCCC---------------HHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            998753               3457788889999888888899999999999999999999999999999999998654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.6e-42  Score=370.01  Aligned_cols=277  Identities=22%  Similarity=0.321  Sum_probs=174.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||+||+|++..+++.||||++.+..  .....++.+|+.+|+.+ +|||||+++++|.......
T Consensus        60 ~~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~  137 (464)
T 3ttj_A           60 VLKRYQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLE  137 (464)
T ss_dssp             EETTEEE-EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTT
T ss_pred             ecCCeEE-EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccc
Confidence            3456775 578999999999999999999999999996532  22345678999999987 6999999999987653211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .          ...+.          -+.+|--+ +               +...+.. . +..+               
T Consensus       138 ~----------~~~~~----------lv~E~~~~-~---------------l~~~~~~-~-l~~~---------------  164 (464)
T 3ttj_A          138 E----------FQDVY----------LVMELMDA-N---------------LCQVIQM-E-LDHE---------------  164 (464)
T ss_dssp             T----------CCEEE----------EEEECCSE-E---------------HHHHHTS-C-CCHH---------------
T ss_pred             c----------CCeEE----------EEEeCCCC-C---------------HHHHHhh-c-CCHH---------------
Confidence            0          00011          01111000 0               0000000 0 0000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        .   +-.                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       165 --~---~~~---------------------~~~q---il~aL~~lH--~~~iiHrDlkp~NIll~---~~~~~kl~DFG~  210 (464)
T 3ttj_A          165 --R---MSY---------------------LLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVK---SDCTLKILDFGL  210 (464)
T ss_dssp             --H---HHH---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEECCCCC
T ss_pred             --H---HHH---------------------HHHH---HHHHHHHHH--HCCcccCCCChHhEEEe---CCCCEEEEEEEe
Confidence              0   001                     3334   667888888  89999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |+......         ...+.+||++|+|||++.+      ..|+.++|||||||++|+|++|++||.+.+..++....
T Consensus       211 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i  275 (464)
T 3ttj_A          211 ARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV  275 (464)
T ss_dssp             C-----CC---------CC----CCCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             eeecCCCc---------ccCCCcccccccCHHHHcC------CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            97543221         2346799999999999963      47999999999999999999999999886532210000


Q ss_pred             CccchhhHH-------HHHHHHhcCCCCCCCCCCC----------------CCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQE-------ILFHSIQQGHYDFPEGEWS----------------TISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~-------~~~~~i~~~~~~~p~~~~~----------------~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+....+..       ............+....|.                ..+++++|||.+||+.||++|||++|+|+
T Consensus       276 ~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000000000       0001111111111110000                01678999999999999999999999999


Q ss_pred             CCCccC
Q psy16343        420 HPWIST  425 (539)
Q Consensus       420 Hpw~~~  425 (539)
                      ||||..
T Consensus       356 Hp~~~~  361 (464)
T 3ttj_A          356 HPYINV  361 (464)
T ss_dssp             STTTGG
T ss_pred             Chhhhh
Confidence            999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=4.5e-42  Score=341.85  Aligned_cols=267  Identities=34%  Similarity=0.608  Sum_probs=199.6

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ..|.+.|++ .+.||+|+||.||+|.+..+++.||+|++.....  .....+.+|++++.++ +||||+++++++.+...
T Consensus         2 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   79 (284)
T 3kk8_A            2 TKFSDNYDV-KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESF   79 (284)
T ss_dssp             CTTTTTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             chhhhhhhh-hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCE
Confidence            357788887 5789999999999999999999999999964322  2235677899999997 59999999999876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-                 + +              .+...+.....+..+             
T Consensus        80 ~~---~v------~e~~~-----------------~-~--------------~l~~~~~~~~~~~~~-------------  105 (284)
T 3kk8_A           80 HY---LV------FDLVT-----------------G-G--------------ELFEDIVAREFYSEA-------------  105 (284)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHHHHHSSCCHH-------------
T ss_pred             EE---EE------EecCC-----------------C-C--------------CHHHHHHhcCCCCHH-------------
Confidence            32   11      11110                 0 0              000000000000000             


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                          ++|.                        +..+   ++.++.|+|  ++||+||||||+|||+..++....+||+||
T Consensus       106 ----~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dikp~Nil~~~~~~~~~~kl~Df  152 (284)
T 3kk8_A          106 ----DASH------------------------CIQQ---ILESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADF  152 (284)
T ss_dssp             ----HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEESSSSTTCCEEECCC
T ss_pred             ----HHHH------------------------HHHH---HHHHHHHHH--HCCcCcCCCCHHHEEEecCCCCCcEEEeec
Confidence                1110                        2333   667788888  999999999999999976655566999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++.......         .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+      
T Consensus       153 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------  211 (284)
T 3kk8_A          153 GLAIEVNDSE---------AWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDED------  211 (284)
T ss_dssp             TTCEECCSSC---------BCCCSCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------
T ss_pred             eeeEEcccCc---------cccCCCCCcCCcCchhhcC------CCCCcccchHHHHHHHHHHHHCCCCCCCCc------
Confidence            9986543221         1235689999999999863      468899999999999999999999997653      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                               ...+...+..+.+.+|...|..+++++++||.+||..||++|||++|+|+||||.....
T Consensus       212 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          212 ---------QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER  270 (284)
T ss_dssp             ---------HHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred             ---------hhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence                     34567778888888888888899999999999999999999999999999999986543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=4.2e-42  Score=347.74  Aligned_cols=268  Identities=22%  Similarity=0.351  Sum_probs=180.9

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ...+.+.|++ .+.||+|+||.||+|.+. +++.||||++.....  .....+.+|++++.++ +||||+++++++.++.
T Consensus        16 ~q~l~~~y~~-~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   92 (311)
T 3niz_A           16 FQGLMEKYQK-LEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSER   92 (311)
T ss_dssp             EECSSCEEEE-EEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSS
T ss_pred             ecchHhhhHh-hhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCC
Confidence            4457778886 578999999999999985 589999999964322  2245688999999997 5999999999997654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~  198 (539)
                      ..+   .|                       .++.-+ .               +...+.. ...+..+           
T Consensus        93 ~~~---lv-----------------------~e~~~~-~---------------l~~~~~~~~~~~~~~-----------  119 (311)
T 3niz_A           93 CLT---LV-----------------------FEFMEK-D---------------LKKVLDENKTGLQDS-----------  119 (311)
T ss_dssp             CEE---EE-----------------------EECCSE-E---------------HHHHHHTCTTCCCHH-----------
T ss_pred             EEE---EE-----------------------EcCCCC-C---------------HHHHHHhccCCCCHH-----------
Confidence            332   11                       111000 0               0000000 0000000           


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                            .++   .                     +.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       120 ------~~~---~---------------------~~~q---i~~~l~~LH--~~~ivH~Dikp~NIl~~---~~~~~kl~  161 (311)
T 3niz_A          120 ------QIK---I---------------------YLYQ---LLRGVAHCH--QHRILHRDLKPQNLLIN---SDGALKLA  161 (311)
T ss_dssp             ------HHH---H---------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEEC
T ss_pred             ------HHH---H---------------------HHHH---HHHHHHHHH--HCCcccCCCchHhEEEC---CCCCEEEc
Confidence                  000   1                     2334   667788888  99999999999999995   44569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+++.......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+.
T Consensus       162 Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  228 (311)
T 3niz_A          162 DFGLARAFGIPVR--------SYTHEVVTLWYRAPDVLMG-----SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ  228 (311)
T ss_dssp             CCTTCEETTSCCC-----------CCCCCCTTCCHHHHTT-----CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH
T ss_pred             cCcCceecCCCcc--------cccCCcccCCcCCHHHhcC-----CCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            9999875432211        2235689999999999863     24689999999999999999999999987654331


Q ss_pred             CcccCccchhhHHHHHHHHhcCC-----------------CC-CCCC----CCCCCCHHHHHHHHHhccccccCCCCHHH
Q psy16343        359 GWQRGETCHACQEILFHSIQQGH-----------------YD-FPEG----EWSTISDEAKDLIRRLLVKDARKRLSAAS  416 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~-----------------~~-~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e  416 (539)
                                 ...+...+....                 +. +...    ....++++++|||.+||++||.+|||++|
T Consensus       229 -----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  297 (311)
T 3niz_A          229 -----------LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARD  297 (311)
T ss_dssp             -----------HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             -----------HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHH
Confidence                       111111111100                 00 0011    11357899999999999999999999999


Q ss_pred             HhcCCCccCCC
Q psy16343        417 VLKHPWISTAG  427 (539)
Q Consensus       417 ~l~Hpw~~~~~  427 (539)
                      +|+||||+...
T Consensus       298 ll~hp~f~~~~  308 (311)
T 3niz_A          298 AMNHPYFKDLD  308 (311)
T ss_dssp             HHTSGGGTTSC
T ss_pred             HhcCcccccCC
Confidence            99999998754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.1e-43  Score=359.16  Aligned_cols=254  Identities=29%  Similarity=0.514  Sum_probs=184.0

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      -+.|++ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|+++++.+ +||||+++++++.+....+
T Consensus         8 i~~Y~i-~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            8 IGPYII-RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             ETTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             cCCEEE-EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEE
Confidence            345665 578999999999999999999999999996421   12345788999999886 5999999999998765432


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|                 +. + +              .++..+.....+..+               
T Consensus        86 ---lv------~E-----------------~~-~-g--------------~l~~~l~~~~~l~~~---------------  108 (336)
T 3h4j_B           86 ---MV------IE-----------------YA-G-G--------------ELFDYIVEKKRMTED---------------  108 (336)
T ss_dssp             ---EE------EC-----------------CC-C-E--------------EHHHHHHHHCSCCHH---------------
T ss_pred             ---EE------EE-----------------CC-C-C--------------cHHHHHHHcCCCCHH---------------
Confidence               11      11                 10 0 0              000000000000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        +++                        .+.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       109 --~~~------------------------~i~~q---i~~aL~~LH--~~givH~Dlkp~NIll~---~~~~~kl~DFG~  154 (336)
T 3h4j_B          109 --EGR------------------------RFFQQ---IICAIEYCH--RHKIVHRDLKPENLLLD---DNLNVKIADFGL  154 (336)
T ss_dssp             --HHH------------------------HHHHH---HHHHHHHHH--HHTCCCCCCSTTTEEEC---TTCCEEECCSSC
T ss_pred             --HHH------------------------HHHHH---HHHHHHHHH--HCCeEecCCchhhEEEc---CCCCEEEEEecc
Confidence              000                        03344   777888888  89999999999999994   445799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCC-CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY-DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y-~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +.......         ...+.|||+.|+|||++.+      ..| +.++|||||||++|+|++|.+||.+.....    
T Consensus       155 s~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----  215 (336)
T 3h4j_B          155 SNIMTDGN---------FLKTSCGSPNYAAPEVING------KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----  215 (336)
T ss_dssp             TBTTTTSB---------TTCCCTTSTTTSCGGGSCC------SGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----
T ss_pred             ceeccCCc---------ccccccCCcCcCCHHHHcC------CCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----
Confidence            87543221         2356799999999999863      334 678999999999999999999998764322    


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                 ++..+..+.+.+|.    .+|+++++||++||..||.+|||++|+++||||...
T Consensus       216 -----------~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          216 -----------LFKKVNSCVYVMPD----FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             -----------CBCCCCSSCCCCCT----TSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             -----------HHHHHHcCCCCCcc----cCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence                       22234445555654    589999999999999999999999999999999754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.5e-43  Score=367.10  Aligned_cols=278  Identities=27%  Similarity=0.420  Sum_probs=189.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .++||+|+||.||+|+++.+|+.||||++++...   .....+.+|+.++..+ +||||++++++|++....+ 
T Consensus        61 ~~f~~-~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~-  137 (412)
T 2vd5_A           61 DDFEI-LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLY-  137 (412)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEE-
T ss_pred             hhEEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEE-
Confidence            44554 4789999999999999999999999999965211   1223467899999886 6999999999998765443 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCC-cccccccccccCCCCCCCCc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE-FMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~-y~aPE~~~~~~~~~~~~~~~  202 (539)
                        .|      +|.+-                 + +              .+...+.... .+..+..             
T Consensus       138 --lV------mE~~~-----------------g-g--------------~L~~~l~~~~~~l~~~~~-------------  164 (412)
T 2vd5_A          138 --LV------MEYYV-----------------G-G--------------DLLTLLSKFGERIPAEMA-------------  164 (412)
T ss_dssp             --EE------ECCCC-----------------S-C--------------BHHHHHHHHSSCCCHHHH-------------
T ss_pred             --EE------EcCCC-----------------C-C--------------cHHHHHHhcCCCCCHHHH-------------
Confidence              11      22111                 0 0              0000000000 0000000             


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                  ..+..+   ++.++.|+|  ++||+||||||+|||+   +..+.+||+|||+
T Consensus       165 ----------------------------~~~~~q---i~~aL~~LH--~~giiHrDLKp~NILl---d~~g~vkL~DFGl  208 (412)
T 2vd5_A          165 ----------------------------RFYLAE---IVMAIDSVH--RLGYVHRDIKPDNILL---DRCGHIRLADFGS  208 (412)
T ss_dssp             ----------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEE---CTTSCEEECCCTT
T ss_pred             ----------------------------HHHHHH---HHHHHHHHH--HCCeeecccCHHHeee---cCCCCEEEeechh
Confidence                                        002333   667778888  9999999999999999   4456799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCC-CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG-PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~-~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ++.......       ....+.|||+.|+|||++....+ .....|+.++|||||||++|+|++|++||.+.+       
T Consensus       209 a~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-------  274 (412)
T 2vd5_A          209 CLKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-------  274 (412)
T ss_dssp             CEECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-------
T ss_pred             heeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-------
Confidence            975533221       11235799999999999963110 012358999999999999999999999998754       


Q ss_pred             cCccchhhHHHHHHHHhcC--CCCCCCCCCCCCCHHHHHHHHHhccccccCCC---CHHHHhcCCCccCCCCCCCCCCCC
Q psy16343        362 RGETCHACQEILFHSIQQG--HYDFPEGEWSTISDEAKDLIRRLLVKDARKRL---SAASVLKHPWISTAGTAHRPLVTP  436 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~---ta~e~l~Hpw~~~~~~~~~~~~~~  436 (539)
                              ...++..|...  .+.+|. .+..+|++++|||++||+ ||.+|+   +++|+++||||....|.......|
T Consensus       275 --------~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l~~~~~  344 (412)
T 2vd5_A          275 --------TAETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVP  344 (412)
T ss_dssp             --------HHHHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTSTTSCC
T ss_pred             --------HHHHHHHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHHhhcCC
Confidence                    23455566543  244442 124689999999999999 999985   899999999999888764433334


Q ss_pred             cccc
Q psy16343        437 QVIR  440 (539)
Q Consensus       437 ~~~~  440 (539)
                      +...
T Consensus       345 p~~p  348 (412)
T 2vd5_A          345 PFTP  348 (412)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            4433

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1e-41  Score=343.93  Aligned_cols=267  Identities=24%  Similarity=0.313  Sum_probs=176.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-----CCCHHHHHHHHHHHHhhc--CCCCeeeeeeeecc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-----GHSRSRVFKEVETFHHCQ--GHPNIIQLLEYYED  117 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-----~~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~  117 (539)
                      +.+.|++ .+.||+|+||.||+|++..+++.||||++....     ......+.+|++++..+.  +||||+++++++..
T Consensus         7 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            7 ATSRYEP-VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ---CCEE-EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             cccceEE-EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            4556775 478999999999999999999999999986322     112346778888877654  59999999999876


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      .......           .+.          -+.++.-+                .+...+...              ..
T Consensus        86 ~~~~~~~-----------~~~----------lv~e~~~~----------------~L~~~~~~~--------------~~  114 (308)
T 3g33_A           86 SRTDREI-----------KVT----------LVFEHVDQ----------------DLRTYLDKA--------------PP  114 (308)
T ss_dssp             CCSSSEE-----------EEE----------EEEECCCC----------------BHHHHHHTC--------------CT
T ss_pred             cCCCCce-----------eEE----------EEehhhhc----------------CHHHHHhhc--------------cC
Confidence            4321100           000          01111000                000000000              00


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      ...+ ...++                        .+.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||
T Consensus       115 ~~~~-~~~~~------------------------~i~~q---i~~al~~lH--~~~ivH~Dlkp~Nil~~---~~~~~kl  161 (308)
T 3g33_A          115 PGLP-AETIK------------------------DLMRQ---FLRGLDFLH--ANCIVHRDLKPENILVT---SGGTVKL  161 (308)
T ss_dssp             TCSC-HHHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCTTTEEEC---TTSCEEE
T ss_pred             CCCC-HHHHH------------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEc---CCCCEEE
Confidence            0000 00000                        03334   667888888  99999999999999994   4456999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||+++......         .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+.. 
T Consensus       162 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-  225 (308)
T 3g33_A          162 ADFGLARIYSYQM---------ALTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-  225 (308)
T ss_dssp             CSCSCTTTSTTCC---------CSGGGGCCCSSCCHHHHHT------SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-
T ss_pred             eeCccccccCCCc---------ccCCccccccccCchHHcC------CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence            9999987543221         2346789999999999963      46899999999999999999999999875421 


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccccccCCCCH
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGE-----------------------WSTISDEAKDLIRRLLVKDARKRLSA  414 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~-----------------------~~~~s~~~~dli~~lL~~dP~~R~ta  414 (539)
                                    .....+.......+...                       +..+++++++||.+||..||++|||+
T Consensus       226 --------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  291 (308)
T 3g33_A          226 --------------DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA  291 (308)
T ss_dssp             --------------HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             --------------HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCH
Confidence                          12222221111111111                       23578999999999999999999999


Q ss_pred             HHHhcCCCccCC
Q psy16343        415 ASVLKHPWISTA  426 (539)
Q Consensus       415 ~e~l~Hpw~~~~  426 (539)
                      +|+|+||||...
T Consensus       292 ~e~l~h~~~~~~  303 (308)
T 3g33_A          292 FRALQHSYLHKD  303 (308)
T ss_dssp             HHHHTSTTC---
T ss_pred             HHHhcCccccCC
Confidence            999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.4e-42  Score=358.31  Aligned_cols=288  Identities=22%  Similarity=0.276  Sum_probs=172.7

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEc--cCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc-
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNI--LTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE-  119 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~-  119 (539)
                      ..+.+.|++.+++||+|+||.||+|+++  .+++.||||++.+..  ....+.+|+++|..+ +|||||+++++|.+.. 
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~   92 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLREL-KHPNVISLQKVFLSHAD   92 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHC-CCTTBCCCCEEEEETTT
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhc-CCCCeeeEeeEEecCCC
Confidence            3478889888889999999999999976  568899999996532  235688999999997 5999999999985422 


Q ss_pred             -cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        120 -NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       120 -~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                       ..+    +                      +.++.-+ .               +...+..        ... .  ...
T Consensus        93 ~~~~----l----------------------v~e~~~~-~---------------l~~~~~~--------~~~-~--~~~  119 (405)
T 3rgf_A           93 RKVW----L----------------------LFDYAEH-D---------------LWHIIKF--------HRA-S--KAN  119 (405)
T ss_dssp             TEEE----E----------------------EEECCSE-E---------------HHHHHHH--------HHH-H--C--
T ss_pred             CeEE----E----------------------EEeCCCC-C---------------HHHHHHH--------hcc-c--ccc
Confidence             111    0                      1111000 0               0000000        000 0  000


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC-CCCCCcee
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP-DQLSPVKL  277 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~-~~~~~ikl  277 (539)
                      ....   .++...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+... +..+.+||
T Consensus       120 ~~~~---~l~~~~~~------------------~i~~q---i~~al~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A          120 KKPV---QLPRGMVK------------------SLLYQ---ILDGIHYLH--ANWVLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             --------CCHHHHH------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             cccc---CCCHHHHH------------------HHHHH---HHHHHHHHH--hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence            0000   00000000                  03334   677888888  9999999999999999643 34567999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||+++........     .....+.+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.....
T Consensus       174 ~Dfg~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  243 (405)
T 3rgf_A          174 ADMGFARLFNSPLKP-----LADLDPVVVTFWYRAPELLLG-----ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI  243 (405)
T ss_dssp             CCTTCCC---------------------CCCTTCCHHHHTT-----CCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC---
T ss_pred             EECCCceecCCCCcc-----cccCCCceecCcccCchhhcC-----CCcccchhhhHHHHHHHHHHHhCCCCCCCccccc
Confidence            999999754322110     112346799999999999863     2458999999999999999999999998764321


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCC----------------------------------CCCHHHHHHHHHh
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWS----------------------------------TISDEAKDLIRRL  403 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~----------------------------------~~s~~~~dli~~l  403 (539)
                      .....     . ....+..|...--..+...|.                                  ..++++++||.+|
T Consensus       244 ~~~~~-----~-~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~  317 (405)
T 3rgf_A          244 KTSNP-----Y-HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKL  317 (405)
T ss_dssp             ---CC-----C-CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHH
T ss_pred             ccccc-----c-hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHH
Confidence            00000     0 001111111100001111121                                  2378999999999


Q ss_pred             ccccccCCCCHHHHhcCCCccCCCC
Q psy16343        404 LVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       404 L~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      |+.||.+|||++|+|+||||.....
T Consensus       318 L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          318 LTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             ccCCcccCCCHHHHhcChhhccCCC
Confidence            9999999999999999999986543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.2e-42  Score=350.39  Aligned_cols=275  Identities=20%  Similarity=0.227  Sum_probs=163.6

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHH--HHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVET--FHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~--l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      |.+ ++.||+|+||+||+|+.  +|+.||||+++..   ....+.+|.++  +.++ +|||||++++++.+.....    
T Consensus         5 i~L-~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~----   73 (303)
T 3hmm_A            5 IVL-QESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVML-RHENILGFIAADNKDNGTW----   73 (303)
T ss_dssp             EEE-EEEEEECSSSEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSS----
T ss_pred             EEE-EEEEeeCCCeEEEEEEE--CCEEEEEEEECcc---chhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCc----
Confidence            444 57899999999999976  6899999999643   23344445444  4444 6999999999986543211    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                              ..+.+          |.+|--+ +              .+...+.... +.++..                 
T Consensus        74 --------~~~~l----------V~Ey~~~-g--------------sL~~~l~~~~-l~~~~~-----------------  102 (303)
T 3hmm_A           74 --------TQLWL----------VSDYHEH-G--------------SLFDYLNRYT-VTVEGM-----------------  102 (303)
T ss_dssp             --------EEEEE----------EEECCTT-C--------------BHHHHHHHCC-BCHHHH-----------------
T ss_pred             --------eEEEE----------EecCCCC-C--------------cHHHHHHhCC-CCHHHH-----------------
Confidence                    01111          1222100 0              0100000000 000000                 


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhh------hhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI------QQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h------~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                                              ..+..+   ++.++.|+|.+      ..|||||||||+|||++   ..+.+||+||
T Consensus       103 ------------------------~~i~~~---ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~---~~~~~Ki~DF  152 (303)
T 3hmm_A          103 ------------------------IKLALS---TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADL  152 (303)
T ss_dssp             ------------------------HHHHHH---HHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC---TTSCEEECCC
T ss_pred             ------------------------HHHHHH---HHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC---CCCCEEEEeC
Confidence                                    002333   67788888832      33999999999999994   4567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+|+.........    .....+.+||+.|||||++.+........|+.++||||+||++|||++|.+||.........+
T Consensus       153 Gla~~~~~~~~~~----~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~  228 (303)
T 3hmm_A          153 GLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  228 (303)
T ss_dssp             TTCEEEETTTTEE----SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred             CCCccccCCCCce----eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence            9997554322110    011235699999999999964211111136789999999999999999999886544322111


Q ss_pred             ccCccchhhHHHHHHHHhcCCC--CCCCCCCC--CCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGHY--DFPEGEWS--TISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~--~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ..........+.+...+....+  .+|.. |.  ..+..+.+|+.+||..||++|||+.|+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             hhcccccchHHHHHHHHhcccCCCCCCcc-ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            1110001112334444444433  23321 11  123578899999999999999999999853

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=7.5e-42  Score=342.18  Aligned_cols=259  Identities=22%  Similarity=0.291  Sum_probs=177.5

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .|++ .+.||+|+||.||+|.+..+++.||||++.....  .....+.+|++++.++ +||||+++++++.++...+   
T Consensus         3 ~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---   77 (292)
T 3o0g_A            3 KYEK-LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLT---   77 (292)
T ss_dssp             SEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE---
T ss_pred             Ccee-eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEE---
Confidence            4554 4689999999999999999999999999965432  2246778999999987 5999999999997654432   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      .|                       .++.-+ .               +.... ....-+.++.                
T Consensus        78 lv-----------------------~e~~~~-~---------------l~~~~~~~~~~l~~~~----------------  102 (292)
T 3o0g_A           78 LV-----------------------FEFCDQ-D---------------LKKYFDSCNGDLDPEI----------------  102 (292)
T ss_dssp             EE-----------------------EECCSE-E---------------HHHHHHHTTTCCCHHH----------------
T ss_pred             EE-----------------------EecCCC-C---------------HHHHHHhCCCCCCHHH----------------
Confidence            11                       111000 0               00000 0000000000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                       ++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       103 -~~------------------------~~~~q---l~~~l~~lH--~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~  149 (292)
T 3o0g_A          103 -VK------------------------SFLFQ---LLKGLGFCH--SRNVLHRDLKPQNLLIN---RNGELKLANFGLAR  149 (292)
T ss_dssp             -HH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             -HH------------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEc---CCCCEEEeecccce
Confidence             00                        03334   677888888  89999999999999994   44579999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|..||.....         
T Consensus       150 ~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~---------  207 (292)
T 3o0g_A          150 AFGIPVR--------CYSAEVVTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGND---------  207 (292)
T ss_dssp             ECCSCCS--------CCCSCCSCGGGCCHHHHTT-----CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS---------
T ss_pred             ecCCccc--------cccCCccccCCcChHHHcC-----CCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC---------
Confidence            5432221        2345689999999999863     23589999999999999999988877543321         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCC-------------------------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPE-------------------------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~-------------------------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           .......+.......+.                         .....+++++++||.+||+.||++|||++|+|+
T Consensus       208 -----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          208 -----VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             -----HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----HHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                 11122222211000000                         112357899999999999999999999999999


Q ss_pred             CCCccCC
Q psy16343        420 HPWISTA  426 (539)
Q Consensus       420 Hpw~~~~  426 (539)
                      ||||...
T Consensus       283 hp~f~~~  289 (292)
T 3o0g_A          283 HPYFSDF  289 (292)
T ss_dssp             SGGGTTC
T ss_pred             CcccccC
Confidence            9999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=7.5e-42  Score=348.48  Aligned_cols=257  Identities=29%  Similarity=0.472  Sum_probs=178.8

Q ss_pred             chhcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      +.|++ .+.||+|+||.||+|++.   .+++.||||++++..    ......+.+|++++..+ +||||+++++++.+..
T Consensus        17 ~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           17 ECFEL-LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             HHeEE-EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCC
Confidence            45665 578999999999999985   689999999997542    12334577899999987 5999999999997754


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|                       .++.-+ +              .+...+........+            
T Consensus        95 ~~~---lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~------------  121 (327)
T 3a62_A           95 KLY---LI-----------------------LEYLSG-G--------------ELFMQLEREGIFMED------------  121 (327)
T ss_dssp             CEE---EE-----------------------EECCTT-E--------------EHHHHHHHHSSCCHH------------
T ss_pred             EEE---EE-----------------------EeCCCC-C--------------cHHHHHHhCCCCCHH------------
Confidence            333   11                       111000 0              000000000000000            


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                           .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       122 -----~~~------------------------~~~~q---i~~al~~lH--~~~ivH~Dlkp~Nill~---~~~~~kl~D  164 (327)
T 3a62_A          122 -----TAC------------------------FYLAE---ISMALGHLH--QKGIIYRDLKPENIMLN---HQGHVKLTD  164 (327)
T ss_dssp             -----HHH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCCTTTEEEC---TTSCEEECC
T ss_pred             -----HHH------------------------HHHHH---HHHHHHHHH--hCCEEcccCCHHHeEEC---CCCcEEEEe
Confidence                 000                        02333   667788888  99999999999999994   446799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+++.......        ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+     
T Consensus       165 fg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~-----  225 (327)
T 3a62_A          165 FGLCKESIHDGT--------VTHTFCGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----  225 (327)
T ss_dssp             CSCC------------------CTTSSCCTTSCHHHHTT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----
T ss_pred             CCcccccccCCc--------cccccCCCcCccCHhhCcC------CCCCCcccchhHHHHHHHHHHCCCCCCCCC-----
Confidence            999875322211        2346789999999999863      468999999999999999999999998753     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                                ...+...|..+.+.+|.    .+++++++||.+||..||.+||     +++|+++||||....+
T Consensus       226 ----------~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          226 ----------RKKTIDKILKCKLNLPP----YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             ----------HHHHHHHHHHTCCCCCT----TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             ----------HHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence                      23456777778777774    5899999999999999999999     8899999999987654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4e-42  Score=341.13  Aligned_cols=264  Identities=33%  Similarity=0.601  Sum_probs=198.5

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.+.|++ .+.||+|+||.||+|.+..++..||+|++.+........+.+|++++.++ +||||+++++++.+....
T Consensus         4 ~~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (277)
T 3f3z_A            4 KGDINQYYTL-ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDI   81 (277)
T ss_dssp             --CHHHHEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhhEEe-eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeE
Confidence            3457778886 57899999999999999999999999999765455577889999999997 699999999999765433


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|                       .++--+ +              .+...+........               
T Consensus        82 ~---lv-----------------------~e~~~~-~--------------~L~~~~~~~~~~~~---------------  105 (277)
T 3f3z_A           82 Y---LV-----------------------MELCTG-G--------------ELFERVVHKRVFRE---------------  105 (277)
T ss_dssp             E---EE-----------------------EECCCS-C--------------BHHHHHHHHCSCCH---------------
T ss_pred             E---EE-----------------------EeccCC-C--------------cHHHHHHHcCCCCH---------------
Confidence            2   11                       111000 0              00000000000000               


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                        .++|.                        +..+   ++.++.|+|  ++||+||||||+|||+..++..+.+||+|||
T Consensus       106 --~~~~~------------------------i~~~---i~~~l~~lH--~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg  154 (277)
T 3f3z_A          106 --SDAAR------------------------IMKD---VLSAVAYCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFG  154 (277)
T ss_dssp             --HHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             --HHHHH------------------------HHHH---HHHHHHHHH--HCCccCCCCCHHHEEEecCCCCCcEEEEecc
Confidence              01110                        2333   667788888  9999999999999999665566789999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ++.......         ...+.+||+.|+|||++.+       .|+.++|||||||++|+|++|.+||.+.+       
T Consensus       155 ~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------  211 (277)
T 3f3z_A          155 LAARFKPGK---------MMRTKVGTPYYVSPQVLEG-------LYGPECDEWSAGVMMYVLLCGYPPFSAPT-------  211 (277)
T ss_dssp             TCEECCTTS---------CBCCCCSCTTTCCHHHHTT-------CBCTTHHHHHHHHHHHHHHHSSCSSCCSS-------
T ss_pred             cceeccCcc---------chhccCCCCCccChHHhcc-------cCCchhhehhHHHHHHHHHHCCCCCCCCC-------
Confidence            987543222         2345689999999999852       48889999999999999999999997653       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                              .......+..+.+.+|...|..+++++++||.+||..||.+|||+.|+|+||||..
T Consensus       212 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          212 --------DSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             --------HHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred             --------HHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence                    23466778888888888777889999999999999999999999999999999975

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.6e-42  Score=368.54  Aligned_cols=257  Identities=26%  Similarity=0.437  Sum_probs=180.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..+|+.||||++.+.   .......+.+|+.++..+ +||||++++++|.+....+ 
T Consensus       148 ~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~-  224 (446)
T 4ejn_A          148 NEFEY-LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLC-  224 (446)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEE-
T ss_pred             HHcEE-eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEE-
Confidence            44665 57899999999999999999999999999642   222334567889888876 5999999999997765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+.....+..+.+              
T Consensus       225 --lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~~~--------------  250 (446)
T 4ejn_A          225 --FV------MEYAN-----------------G-G--------------ELFFHLSRERVFSEDRA--------------  250 (446)
T ss_dssp             --EE------ECCCS-----------------S-C--------------BHHHHHHHHSCCCHHHH--------------
T ss_pred             --EE------EeeCC-----------------C-C--------------cHHHHHHhcCCCCHHHH--------------
Confidence              11      11110                 0 0              00000000000000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                            -.                     +..|   ++.++.|+|  + +||+||||||+|||+.   ..+.+||+|||+
T Consensus       251 ------~~---------------------~~~q---i~~aL~~LH--~~~giiHrDlkp~NIll~---~~~~~kl~DFG~  295 (446)
T 4ejn_A          251 ------RF---------------------YGAE---IVSALDYLH--SEKNVVYRDLKLENLMLD---KDGHIKITDFGL  295 (446)
T ss_dssp             ------HH---------------------HHHH---HHHHHHHHH--HHTCCCCCCCCGGGEEEC---SSSCEEECCCCC
T ss_pred             ------HH---------------------HHHH---HHHHHHHHh--hcCCEEECCCCHHHEEEC---CCCCEEEccCCC
Confidence                  00                     2333   667788888  7 8999999999999994   445799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......        ....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+        
T Consensus       296 a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------  353 (446)
T 4ejn_A          296 CKEGIKDG--------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------  353 (446)
T ss_dssp             CCTTCC-------------CCSSSCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------
T ss_pred             ceeccCCC--------cccccccCCccccCHhhcCC------CCCCCccchhhhHHHHHHHhhCCCCCCCCC--------
Confidence            87532211        12346799999999999963      469999999999999999999999998753        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                             ...++..|....+.+|.    .+++++++||.+||.+||.+||     +++|+|+||||.+..+
T Consensus       354 -------~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          354 -------HEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             -------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             -------HHHHHHHHHhCCCCCCc----cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence                   34567778888888875    5899999999999999999999     9999999999987654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.3e-41  Score=344.27  Aligned_cols=264  Identities=25%  Similarity=0.406  Sum_probs=184.3

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|-+.|++ .+.||+|+||.||+|++..+++.||||++..... .....+.+|+.++..+ +||||+++++++.++...+
T Consensus         4 ~~~~~y~i-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~   81 (323)
T 3tki_A            4 PFVEDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY   81 (323)
T ss_dssp             TTTTCEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             cHhhhcee-eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEE
Confidence            46677886 5789999999999999999999999999964322 2235678999999987 5999999999998765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +                 ++.-+ +              .+...+.....+..+               
T Consensus        82 ---lv------~-----------------e~~~~-~--------------~L~~~l~~~~~~~~~---------------  105 (323)
T 3tki_A           82 ---LF------L-----------------EYCSG-G--------------ELFDRIEPDIGMPEP---------------  105 (323)
T ss_dssp             ---EE------E-----------------ECCTT-E--------------EGGGGSBTTTBCCHH---------------
T ss_pred             ---EE------E-----------------EcCCC-C--------------cHHHHHhhcCCCCHH---------------
Confidence               11      1                 11000 0              010111000000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        +++.                        +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       106 --~~~~------------------------i~~q---i~~aL~~LH--~~givH~Dlkp~NIll~---~~~~~kl~Dfg~  151 (323)
T 3tki_A          106 --DAQR------------------------FFHQ---LMAGVVYLH--GIGITHRDIKPENLLLD---ERDNLKISDFGL  151 (323)
T ss_dssp             --HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEECCCTT
T ss_pred             --HHHH------------------------HHHH---HHHHHHHHH--HCCccccccchHHEEEe---CCCCEEEEEeec
Confidence              0000                        3334   677888888  99999999999999994   445699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.......      .......+||+.|+|||++.+     ...++.++|||||||++|+|++|.+||.+.....     
T Consensus       152 a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----  215 (323)
T 3tki_A          152 ATVFRYNNR------ERLLNKMCGTLPYVAPELLKR-----REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----  215 (323)
T ss_dssp             CEECEETTE------ECCBCSCCSCGGGSCHHHHHC-----SSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-----
T ss_pred             cceeccCCc------ccccCCCccCcCccCcHHhcc-----CCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-----
Confidence            975433221      112346799999999999973     2234678999999999999999999998754321     


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                               ..+..+......++  .|..+++++++||.+||..||.+|||++|+++||||...
T Consensus       216 ---------~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          216 ---------QEYSDWKEKKTYLN--PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             ---------HHHHHHHTTCTTST--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ---------HHHHHHhcccccCC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence                     12223333332222  356799999999999999999999999999999999764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=5.1e-41  Score=355.44  Aligned_cols=296  Identities=23%  Similarity=0.343  Sum_probs=182.9

Q ss_pred             ccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        41 ~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      ....+.+.|++ .+.||+|+||.||+|++..+++.||||++.+....  ...++.+|+++|.++ +|||||++++++...
T Consensus        20 ~~~~i~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           20 KNVHVPDNYII-KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPD   97 (432)
T ss_dssp             GGCCCCTTEEE-EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCS
T ss_pred             CcceecCCEEE-EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecC
Confidence            34456777886 57899999999999999999999999999753222  245788999999997 599999999998765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      .....           ..+.+          +.++  ..+              .+...+.....+..+.+         
T Consensus        98 ~~~~~-----------~~~~l----------v~e~--~~~--------------~L~~~~~~~~~l~~~~~---------  131 (432)
T 3n9x_A           98 DLLKF-----------DELYI----------VLEI--ADS--------------DLKKLFKTPIFLTEEHI---------  131 (432)
T ss_dssp             CTTTC-----------CCEEE----------EEEC--CSE--------------EHHHHHHSSCCCCHHHH---------
T ss_pred             CCCcC-----------CeEEE----------EEec--CCc--------------CHHHHHhccCCCCHHHH---------
Confidence            32110           01110          1111  000              00000000000010000         


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                                 -.                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       132 -----------~~---------------------i~~q---il~aL~~LH--~~givHrDlkp~NILl~---~~~~~kL~  171 (432)
T 3n9x_A          132 -----------KT---------------------ILYN---LLLGENFIH--ESGIIHRDLKPANCLLN---QDCSVKVC  171 (432)
T ss_dssp             -----------HH---------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEEC
T ss_pred             -----------HH---------------------HHHH---HHHHHHHHH--HCCCCCCCCCHHHeEEC---CCCCEEEc
Confidence                       01                     3334   677888888  99999999999999994   44679999


Q ss_pred             cCCCccccccCCCCCC--------------CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHH
Q psy16343        279 DFDLGSGIKFNTSVHS--------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL  344 (539)
Q Consensus       279 DFGla~~~~~~~~~~~--------------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll  344 (539)
                      |||+|+..........              ......+.+.+||++|+|||++..     ...|+.++||||||||+|+|+
T Consensus       172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL-----QENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CCTTCEEC-------------------------------CCCCCTTCCHHHHTT-----CSCCCTHHHHHHHHHHHHHHH
T ss_pred             cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc-----CCCCCcccccchHHHHHHHHH
Confidence            9999986533211000              000013467899999999999753     346999999999999999999


Q ss_pred             hC-----------CCCCCCCCCCCCCcccCc--c----chhh--------------------HHHHHHHHhcCCCCCCC-
Q psy16343        345 CG-----------YPPFYGNCGEDCGWQRGE--T----CHAC--------------------QEILFHSIQQGHYDFPE-  386 (539)
Q Consensus       345 ~G-----------~~PF~~~~~~~~~~~~~~--~----~~~~--------------------~~~~~~~i~~~~~~~p~-  386 (539)
                      +|           .++|.|.+..........  .    ....                    .......+.......+. 
T Consensus       247 ~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (432)
T 3n9x_A          247 NMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN  326 (432)
T ss_dssp             TTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCC
T ss_pred             hcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCC
Confidence            84           455544331100000000  0    0000                    00111112211111111 


Q ss_pred             --CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        387 --GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       387 --~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                        ..|+.++++++|||++||+.||.+|||++|+|+||||....+.
T Consensus       327 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~  371 (432)
T 3n9x_A          327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKK  371 (432)
T ss_dssp             HHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCT
T ss_pred             HHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCc
Confidence              1235689999999999999999999999999999999876543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.8e-42  Score=358.14  Aligned_cols=263  Identities=33%  Similarity=0.565  Sum_probs=188.3

Q ss_pred             ccchhccc-CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         45 FQDLYRLK-GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        45 f~~~y~~~-~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.+.|.+. .++||+|+||.||+|.+..+|+.||||++..........+.+|++++.++ +|||||++++++.+....+ 
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~-  162 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIV-  162 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE-
Confidence            33444432 46799999999999999999999999999764434456788999999987 5999999999997754332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++--+ +              .+...+......-+|                
T Consensus       163 --lv-----------------------~E~~~~-~--------------~L~~~l~~~~~~l~~----------------  186 (373)
T 2x4f_A          163 --LV-----------------------MEYVDG-G--------------ELFDRIIDESYNLTE----------------  186 (373)
T ss_dssp             --EE-----------------------EECCTT-C--------------EEHHHHHHTGGGCCH----------------
T ss_pred             --EE-----------------------EeCCCC-C--------------cHHHHHHhcCCCCCH----------------
Confidence              11                       111000 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .+++.                        +..|   ++.++.|+|  ++||+||||||+|||+..+ ..+.+||+|||++
T Consensus       187 ~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a  236 (373)
T 2x4f_A          187 LDTIL------------------------FMKQ---ICEGIRHMH--QMYILHLDLKPENILCVNR-DAKQIKIIDFGLA  236 (373)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEEET-TTTEEEECCCSSC
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--HCCcccccCCHHHEEEecC-CCCcEEEEeCCCc
Confidence            00000                        2333   677888888  9999999999999998542 2356999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+         
T Consensus       237 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~---------  292 (373)
T 2x4f_A          237 RRYKPRE---------KLKVNFGTPEFLAPEVVNY------DFVSFPTDMWSVGVIAYMLLSGLSPFLGDN---------  292 (373)
T ss_dssp             EECCTTC---------BCCCCCSSCTTCCHHHHTT------CBCCHHHHHHHHHHHHHHHHHSSCTTCCSS---------
T ss_pred             eecCCcc---------ccccccCCCcEeChhhccC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---------
Confidence            7553222         1235689999999999863      468899999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                            ....+..|....+.++...|..+++++++||.+||..||.+|||++|+|+||||..
T Consensus       293 ------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          293 ------DAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             ------HHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             ------HHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence                  23456777778888887788899999999999999999999999999999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=339.74  Aligned_cols=259  Identities=27%  Similarity=0.474  Sum_probs=179.5

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--------------------------CHHHHHHHHHHHH
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--------------------------SRSRVFKEVETFH  100 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--------------------------~~~~~~~Ei~~l~  100 (539)
                      +.|++ .+.||+|+||.||+|++..+++.||||++.+....                          ....+.+|++++.
T Consensus        13 ~~y~~-~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           13 NQYTL-KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             TTEEE-EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             cceEE-EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            45665 57899999999999999999999999999643211                          1246789999999


Q ss_pred             hhcCCCCeeeeeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC
Q psy16343        101 HCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS  180 (539)
Q Consensus       101 ~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt  180 (539)
                      .+ +||||+++++++.+.....              +.          -+.++.-+ +              .+......
T Consensus        92 ~l-~h~~iv~~~~~~~~~~~~~--------------~~----------lv~e~~~~-~--------------~l~~~~~~  131 (298)
T 2zv2_A           92 KL-DHPNVVKLVEVLDDPNEDH--------------LY----------MVFELVNQ-G--------------PVMEVPTL  131 (298)
T ss_dssp             TC-CCTTBCCEEEEEECSSSSE--------------EE----------EEEECCTT-C--------------BSCCSSCS
T ss_pred             hC-CCCCCCeEEEEEEcCCCCE--------------EE----------EEEecCCC-C--------------cHHHHhhc
Confidence            97 5999999999987632110              00          01111000 0              00000000


Q ss_pred             CCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCC
Q psy16343        181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLK  260 (539)
Q Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlK  260 (539)
                       ..+..+                 .++.                        +..|   ++.++.|+|  ++||+|||||
T Consensus       132 -~~~~~~-----------------~~~~------------------------~~~q---i~~~l~~lH--~~~ivH~Dlk  164 (298)
T 2zv2_A          132 -KPLSED-----------------QARF------------------------YFQD---LIKGIEYLH--YQKIIHRDIK  164 (298)
T ss_dssp             -SCCCHH-----------------HHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCC
T ss_pred             -CCCCHH-----------------HHHH------------------------HHHH---HHHHHHHHH--HCCeeccCCC
Confidence             000000                 0110                        2333   667788888  8999999999


Q ss_pred             CCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHH
Q psy16343        261 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  340 (539)
Q Consensus       261 peNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvil  340 (539)
                      |+|||+.   ..+.+||+|||+++.......        .....+||+.|+|||++...   ....++.++|||||||++
T Consensus       165 p~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~Di~slG~~l  230 (298)
T 2zv2_A          165 PSNLLVG---EDGHIKIADFGVSNEFKGSDA--------LLSNTVGTPAFMAPESLSET---RKIFSGKALDVWAMGVTL  230 (298)
T ss_dssp             GGGEEEC---TTSCEEECCCTTCEECSSSSC--------EECCCCSCGGGCCGGGCCTT---CCCEESHHHHHHHHHHHH
T ss_pred             HHHEEEC---CCCCEEEecCCCccccccccc--------cccCCcCCccccChhhhccC---CCCCCCchhhhHhHHHHH
Confidence            9999994   445799999999875432211        23456899999999998631   011146789999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       341 y~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      |+|++|.+||.+..               ...+...+....+.+|.  ...+++++++||.+||..||++|||++|+|+|
T Consensus       231 ~~l~~g~~pf~~~~---------------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          231 YCFVFGQCPFMDER---------------IMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHHHHSSCSSCCSS---------------HHHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHHHHCCCCCCCcc---------------HHHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            99999999997643               23355566666666664  35789999999999999999999999999999


Q ss_pred             CCcc
Q psy16343        421 PWIS  424 (539)
Q Consensus       421 pw~~  424 (539)
                      |||+
T Consensus       294 p~~~  297 (298)
T 2zv2_A          294 PWVT  297 (298)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            9995

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.9e-41  Score=341.31  Aligned_cols=265  Identities=33%  Similarity=0.587  Sum_probs=194.9

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+|+.||||++.+........+.+|++++..+ +||||+++++++.+....+
T Consensus         5 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   82 (304)
T 2jam_A            5 TNIRKTFIF-MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYY   82 (304)
T ss_dssp             -CHHHHEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             cchhcccee-eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEE
Confidence            346677776 57899999999999999999999999999765443455688999999997 5999999999987654332


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+-                 + +              .+...+.....+.+                
T Consensus        83 ---lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~----------------  105 (304)
T 2jam_A           83 ---LV------MQLVS-----------------G-G--------------ELFDRILERGVYTE----------------  105 (304)
T ss_dssp             ---EE------ECCCC-----------------S-C--------------BHHHHHHHHSCCCH----------------
T ss_pred             ---EE------EEcCC-----------------C-c--------------cHHHHHHHcCCCCH----------------
Confidence               11      11100                 0 0              00000000000000                


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+...+..+.+||+|||+
T Consensus       106 -~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~  155 (304)
T 2jam_A          106 -KDASL------------------------VIQQ---VLSAVKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGL  155 (304)
T ss_dssp             -HHHHH------------------------HHHH---HHHHHHHHH--HTTCCCCSCCGGGCEESSSSTTCCEEBCSCST
T ss_pred             -HHHHH------------------------HHHH---HHHHHHHHH--HCCccccCCCHHHEEEecCCCCCCEEEccCCc
Confidence             00110                        2333   667788888  99999999999999996555567799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......          .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+        
T Consensus       156 ~~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------  211 (304)
T 2jam_A          156 SKMEQNG----------IMSTACGTPGYVAPEVLAQ------KPYSKAVDCWSIGVITYILLCGYPPFYEET--------  211 (304)
T ss_dssp             TCCCCCB----------TTHHHHSCCCBCCTTTBSS------CSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--------
T ss_pred             ceecCCC----------ccccccCCCCccChHHhcc------CCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------
Confidence            8643211          1235689999999999863      468899999999999999999999997653        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                             ...+...+..+.+.++...|..+++++++||.+||..||.+|||++|+|+||||....
T Consensus       212 -------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          212 -------ESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             -------HHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             -------HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence                   2346778888888888877889999999999999999999999999999999998643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.8e-41  Score=350.94  Aligned_cols=265  Identities=32%  Similarity=0.560  Sum_probs=192.8

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--------CHHHHHHHHHHHHhhcCCCCeeeeeeeec
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--------SRSRVFKEVETFHHCQGHPNIIQLLEYYE  116 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--------~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~  116 (539)
                      |.+.|++ .+.||+|+||.||+|.+..+|+.||||++......        ....+.+|+.++..+.+||||++++++++
T Consensus        92 ~~~~y~~-~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           92 FYQKYDP-KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHHEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhhccc-ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            4456665 47899999999999999999999999998643211        13456789999999867999999999987


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      .....+   .|      +|.+-                 + +              .+...+....-++.+         
T Consensus       171 ~~~~~~---lv------~e~~~-----------------g-~--------------~L~~~l~~~~~l~~~---------  200 (365)
T 2y7j_A          171 SSSFMF---LV------FDLMR-----------------K-G--------------ELFDYLTEKVALSEK---------  200 (365)
T ss_dssp             BSSEEE---EE------ECCCT-----------------T-C--------------BHHHHHHHHSSCCHH---------
T ss_pred             eCCEEE---EE------EEeCC-----------------C-C--------------cHHHHHHhcCCCCHH---------
Confidence            654332   11      11110                 0 0              000000000000000         


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCce
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVK  276 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ik  276 (539)
                              .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+|
T Consensus       201 --------~~~------------------------~i~~q---i~~~L~~LH--~~gi~H~Dlkp~NIl~~---~~~~ik  240 (365)
T 2y7j_A          201 --------ETR------------------------SIMRS---LLEAVSFLH--ANNIVHRDLKPENILLD---DNMQIR  240 (365)
T ss_dssp             --------HHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEE
T ss_pred             --------HHH------------------------HHHHH---HHHHHHHHH--hCCeecCCCCHHHEEEC---CCCCEE
Confidence                    000                        03334   667788888  89999999999999994   446799


Q ss_pred             eccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCC
Q psy16343        277 LCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE  356 (539)
Q Consensus       277 l~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~  356 (539)
                      |+|||++..+....         ...+.+||+.|+|||++.+........|+.++|||||||++|+|++|.+||.+.+  
T Consensus       241 l~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--  309 (365)
T 2y7j_A          241 LSDFGFSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR--  309 (365)
T ss_dssp             ECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred             EEecCcccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC--
Confidence            99999987554322         2346789999999999864222123458899999999999999999999997643  


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                   .......+..+.+.++...|..++.++++||.+||..||.+|||++|+|+||||.
T Consensus       310 -------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          310 -------------QILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             -------------HHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             -------------HHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence                         2345667778888887777888999999999999999999999999999999996

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4.7e-41  Score=340.87  Aligned_cols=267  Identities=25%  Similarity=0.393  Sum_probs=170.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|++ .+.||+|+||.||+|.+..+|+.||||+++... ......+.+|++++..+ +||||+++++++.++...+   
T Consensus         5 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~---   79 (317)
T 2pmi_A            5 SQFKQ-LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLT---   79 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEE---
T ss_pred             cceeE-eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEE---
Confidence            34554 568999999999999999999999999996432 22346788999999987 5999999999998764433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .++.-+                .+..      |+.-.....    .....    +
T Consensus        80 lv-----------------------~e~~~~----------------~L~~------~l~~~~~~~----~~~~~----~  106 (317)
T 2pmi_A           80 LV-----------------------FEFMDN----------------DLKK------YMDSRTVGN----TPRGL----E  106 (317)
T ss_dssp             EE-----------------------EECCCC----------------BHHH------HHHHHHSSS----CCCCC----C
T ss_pred             EE-----------------------EEecCC----------------CHHH------HHHhccccc----cccCC----C
Confidence            11                       111000                0000      000000000    00000    0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                         ...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       107 ---~~~~~------------------~~~~q---i~~aL~~lH--~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A          107 ---LNLVK------------------YFQWQ---LLQGLAFCH--ENKILHRDLKPQNLLIN---KRGQLKLGDFGLARA  157 (317)
T ss_dssp             ---HHHHH------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCCSSCEE
T ss_pred             ---HHHHH------------------HHHHH---HHHHHHHHH--HCCeeeCCCChHHeEEc---CCCCEEECcCcccee
Confidence               00000                  02233   677888888  99999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..         
T Consensus       158 ~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------  215 (317)
T 2pmi_A          158 FGIPVN--------TFSSEVVTLWYRAPDVLMG-----SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---------  215 (317)
T ss_dssp             TTSCCC--------CCCCCCSCCTTCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------
T ss_pred             cCCCcc--------cCCCCcccccccCchHhhC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---------
Confidence            432211        1235689999999999863     246899999999999999999999999875421         


Q ss_pred             chhhHHHHHHHHhc--CC--------------C--CCC------------CCCCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        366 CHACQEILFHSIQQ--GH--------------Y--DFP------------EGEWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       366 ~~~~~~~~~~~i~~--~~--------------~--~~p------------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                            .....|..  +.              +  .++            ......++.+++|||.+||+.||++|||++
T Consensus       216 ------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  289 (317)
T 2pmi_A          216 ------EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAK  289 (317)
T ss_dssp             ------HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             ------HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHH
Confidence                  12222211  00              0  000            001235789999999999999999999999


Q ss_pred             HHhcCCCccCCCC
Q psy16343        416 SVLKHPWISTAGT  428 (539)
Q Consensus       416 e~l~Hpw~~~~~~  428 (539)
                      |+|+||||....+
T Consensus       290 e~l~hp~f~~~~~  302 (317)
T 2pmi_A          290 QALHHPWFAEYYH  302 (317)
T ss_dssp             HHTTSGGGGGGCC
T ss_pred             HHhCChhhhcccc
Confidence            9999999986544

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.1e-41  Score=342.61  Aligned_cols=266  Identities=38%  Similarity=0.596  Sum_probs=195.5

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC------CCHHHHHHHHHHHHhhcCCCCeeeeeeeec
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG------HSRSRVFKEVETFHHCQGHPNIIQLLEYYE  116 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~  116 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+|+.||||++.+...      .....+.+|+.++..+ .||||+++++++.
T Consensus         8 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   85 (321)
T 2a2a_A            8 QKVEDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYE   85 (321)
T ss_dssp             SCHHHHEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hhhhccEEE-eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence            456777886 5789999999999999999999999999965322      1356788999999997 5999999999997


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +....+   .|      +|.+-                 + +              .+...+....-+..+         
T Consensus        86 ~~~~~~---lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~---------  115 (321)
T 2a2a_A           86 NRTDVV---LI------LELVS-----------------G-G--------------ELFDFLAQKESLSEE---------  115 (321)
T ss_dssp             CSSEEE---EE------ECCCC-----------------S-C--------------BHHHHHHTCSCEEHH---------
T ss_pred             cCCEEE---EE------EEcCC-----------------C-C--------------cHHHHHHhcCCCCHH---------
Confidence            654332   11      11110                 0 0              000000000000000         


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-CCCc
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-LSPV  275 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-~~~i  275 (539)
                              .+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..++. ...+
T Consensus       116 --------~~~~------------------------i~~q---i~~aL~~lH--~~~ivH~dikp~NIl~~~~~~~~~~~  158 (321)
T 2a2a_A          116 --------EATS------------------------FIKQ---ILDGVNYLH--TKKIAHFDLKPENIMLLDKNIPIPHI  158 (321)
T ss_dssp             --------HHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEESCTTSSSCCE
T ss_pred             --------HHHH------------------------HHHH---HHHHHHHHH--hCCeecCCCChHHEEEecCCCCcCCE
Confidence                    0110                        2333   667788888  899999999999999965431 1269


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||++.......         .....+||+.|+|||++..      ..|+.++|+|||||++|+|++|..||.+.+ 
T Consensus       159 kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~-  222 (321)
T 2a2a_A          159 KLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDT-  222 (321)
T ss_dssp             EECCCTTCEECCTTC---------CCCCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-
T ss_pred             EEccCccceecCccc---------cccccCCCCCccCcccccC------CCCCCccccHHHHHHHHHHHHCCCCCCCCC-
Confidence            999999987543321         1235689999999999863      468899999999999999999999998753 


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                                    .......+..+.+.++...+..+++++++||.+||..||.+|||++|+|+||||....
T Consensus       223 --------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          223 --------------KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             --------------HHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             --------------HHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence                          2345667777777777666678999999999999999999999999999999997543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=7.6e-42  Score=348.54  Aligned_cols=268  Identities=23%  Similarity=0.318  Sum_probs=174.8

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ...-+.|++ .+.||+|+||.||+|++..+++.||||++.....  .....+.+|++++..+ +||||+++++++.+...
T Consensus        30 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           30 ATSIDRYRR-ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             --CGGGEEE-EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTE
T ss_pred             ccchhhEEE-EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCE
Confidence            345566776 5789999999999999999999999999964332  2234567899999987 59999999999977644


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|                       .++  ..+              .+...+.....+..+             
T Consensus       108 ~~---lv-----------------------~e~--~~~--------------~L~~~~~~~~~~~~~-------------  132 (329)
T 3gbz_A          108 LH---LI-----------------------FEY--AEN--------------DLKKYMDKNPDVSMR-------------  132 (329)
T ss_dssp             EE---EE-----------------------EEC--CSE--------------EHHHHHHHCTTCCHH-------------
T ss_pred             EE---EE-----------------------Eec--CCC--------------CHHHHHhhcCCCCHH-------------
Confidence            33   11                       111  000              000000000000000             


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC--CCCCceec
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD--QLSPVKLC  278 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~--~~~~ikl~  278 (539)
                          .++   .                     +.+|   ++.++.|+|  ++||+||||||+|||+..++  ..+.+||+
T Consensus       133 ----~~~---~---------------------i~~q---l~~~l~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~  179 (329)
T 3gbz_A          133 ----VIK---S---------------------FLYQ---LINGVNFCH--SRRCLHRDLKPQNLLLSVSDASETPVLKIG  179 (329)
T ss_dssp             ----HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred             ----HHH---H---------------------HHHH---HHHHHHHHH--hCCEECCCCCHHHEEEecCCCCccceEEEC
Confidence                000   0                     3334   677888888  99999999999999996432  23458999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+++.......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..  
T Consensus       180 Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--  244 (329)
T 3gbz_A          180 DFGLARAFGIPIR--------QFTHEIITLWYRPPEILLG-----SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--  244 (329)
T ss_dssp             CTTHHHHHC-------------------CCTTCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred             cCCCccccCCccc--------ccCCCcCCccccCHHHhcC-----CCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--
Confidence            9999875432211        2335689999999999863     245899999999999999999999999875421  


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCC--------------------------CCCCHHHHHHHHHhccccccCCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEW--------------------------STISDEAKDLIRRLLVKDARKRL  412 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~--------------------------~~~s~~~~dli~~lL~~dP~~R~  412 (539)
                                  + ....+.......+...|                          ..+++++++||.+||..||.+||
T Consensus       245 ------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  311 (329)
T 3gbz_A          245 ------------D-QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRI  311 (329)
T ss_dssp             ------------H-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSC
T ss_pred             ------------H-HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCC
Confidence                        1 12222111000001111                          11789999999999999999999


Q ss_pred             CHHHHhcCCCccCCCC
Q psy16343        413 SAASVLKHPWISTAGT  428 (539)
Q Consensus       413 ta~e~l~Hpw~~~~~~  428 (539)
                      |++|+|+||||....+
T Consensus       312 t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          312 SAKNALEHPYFSHNDF  327 (329)
T ss_dssp             CHHHHHTSGGGSSSCS
T ss_pred             CHHHHhCCcccCCCCC
Confidence            9999999999987655

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2e-41  Score=367.67  Aligned_cols=261  Identities=26%  Similarity=0.385  Sum_probs=189.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||.||+|.++.+|+.||||++.+..   ......+.+|+++|..+ +|||||+++++|++....+  
T Consensus       185 ~f~~-~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~--  260 (576)
T 2acx_A          185 TFRQ-YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALC--  260 (576)
T ss_dssp             GEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE--
T ss_pred             ceEE-EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEE--
Confidence            3443 478999999999999999999999999996421   23345678999999987 5999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+....              ...++   
T Consensus       261 -lV------mEy~~-----------------g-g--------------~L~~~l~~~~--------------~~~l~---  284 (576)
T 2acx_A          261 -LV------LTLMN-----------------G-G--------------DLKFHIYHMG--------------QAGFP---  284 (576)
T ss_dssp             -EE------ECCCC-----------------S-C--------------BHHHHHHSSS--------------SCCCC---
T ss_pred             -EE------EEcCC-----------------C-C--------------cHHHHHHhcC--------------CCCCC---
Confidence             11      12110                 0 0              0000000000              00000   


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                          ...+.                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       285 ----e~~~~------------------~i~~q---Il~aL~yLH--~~gIvHrDLKPeNILld---~~g~vKL~DFGla~  334 (576)
T 2acx_A          285 ----EARAV------------------FYAAE---ICCGLEDLH--RERIVYRDLKPENILLD---DHGHIRISDLGLAV  334 (576)
T ss_dssp             ----HHHHH------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             ----HHHHH------------------HHHHH---HHHHHHHHH--HCCEeccCCchheEEEe---CCCCeEEEecccce
Confidence                00000                  02333   667788888  89999999999999994   45679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......         ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.....       
T Consensus       335 ~~~~~~---------~~~~~~GT~~Y~APEvl~~------~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-------  392 (576)
T 2acx_A          335 HVPEGQ---------TIKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-------  392 (576)
T ss_dssp             ECCTTC---------CEECCCSCGGGCCHHHHTT------CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-------
T ss_pred             ecccCc---------cccccCCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCcccccch-------
Confidence            543221         2346799999999999963      468999999999999999999999998754321       


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                          ....+...+......+|.    .+|+++++||.+||++||.+||     +++|+++||||....+
T Consensus       393 ----~~~~i~~~i~~~~~~~p~----~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          393 ----KREEVERLVKEVPEEYSE----RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             ----CHHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             ----hHHHHHHHhhcccccCCc----cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCH
Confidence                134566677777776663    6899999999999999999999     7899999999987654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3e-41  Score=360.53  Aligned_cols=255  Identities=26%  Similarity=0.434  Sum_probs=188.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|.+ ++.||+|+||.||+|.+..+|+.||||++++..   ......+.+|+++++.+ +||||+++++++.+....+ 
T Consensus        16 ~~Y~l-~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~-   92 (476)
T 2y94_A           16 GHYIL-GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIF-   92 (476)
T ss_dssp             TTEEE-EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             cCEEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE-
Confidence            45665 678999999999999999999999999996431   12345788999999886 5999999999997764432 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++.-+ +              .+...+.....+..+.               
T Consensus        93 --lv-----------------------~E~~~g-g--------------~L~~~l~~~~~l~~~~---------------  117 (476)
T 2y94_A           93 --MV-----------------------MEYVSG-G--------------ELFDYICKNGRLDEKE---------------  117 (476)
T ss_dssp             --EE-----------------------EECCSS-E--------------EHHHHTTSSSSCCHHH---------------
T ss_pred             --EE-----------------------EeCCCC-C--------------cHHHHHHhcCCCCHHH---------------
Confidence              11                       111000 0              0100000000001000               


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                        ++                        .+.+|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       118 --~~------------------------~i~~q---i~~aL~~LH--~~givHrDLkp~NIll~---~~~~vkL~DFG~a  163 (476)
T 2y94_A          118 --SR------------------------RLFQQ---ILSGVDYCH--RHMVVHRDLKPENVLLD---AHMNAKIADFGLS  163 (476)
T ss_dssp             --HH------------------------HHHHH---HHHHHHHHH--TTTEECSCCSGGGEEEC---TTCCEEECCCSSC
T ss_pred             --HH------------------------HHHHH---HHHHHHHHH--HCCCCcccccHHHEEEe---cCCCeEEEeccch
Confidence              00                        03334   677888888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         ...+.|||+.|+|||++.+     ...++.++|||||||++|+|++|.+||.+.+.        
T Consensus       164 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------  221 (476)
T 2y94_A          164 NMMSDGE---------FLRTSCGSPNYAAPEVISG-----RLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------  221 (476)
T ss_dssp             EECCTTC---------CBCCCCSCSTTCCHHHHTT-----CCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------
T ss_pred             hhccccc---------cccccCCCcCeEChhhccC-----CCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------
Confidence            7543221         2457799999999999963     12236799999999999999999999986532        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                             ..++..|..+.+.+|.    .+++++++||++||..||.+|||++|+++||||...
T Consensus       222 -------~~~~~~i~~~~~~~p~----~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          222 -------PTLFKKICDGIFYTPQ----YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             -------HHHHHHHHTTCCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             -------HHHHHHHhcCCcCCCc----cCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                   3467778888777764    589999999999999999999999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.2e-41  Score=338.31  Aligned_cols=258  Identities=21%  Similarity=0.325  Sum_probs=172.1

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .|++ .+.||+|+||.||+|.+ .+++.||||++.....  .....+.+|++++..+ +||||+++++++.+....+   
T Consensus         3 ~y~~-~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---   76 (288)
T 1ob3_A            3 KYHG-LEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLV---   76 (288)
T ss_dssp             SEEE-EEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEE---
T ss_pred             cchh-hhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEE---
Confidence            4554 46899999999999998 6789999999964321  2245788999999987 5999999999987654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .++.-+ .               +...           +..    .....+ ...
T Consensus        77 lv-----------------------~e~~~~-~---------------l~~~-----------~~~----~~~~~~-~~~  101 (288)
T 1ob3_A           77 LV-----------------------FEHLDQ-D---------------LKKL-----------LDV----CEGGLE-SVT  101 (288)
T ss_dssp             EE-----------------------EECCSE-E---------------HHHH-----------HHT----STTCCC-HHH
T ss_pred             EE-----------------------EEecCC-C---------------HHHH-----------HHh----cccCCC-HHH
Confidence            11                       111000 0               0000           000    000000 000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++.                        +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       102 ~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~  149 (288)
T 1ob3_A          102 AKS------------------------FLLQ---LLNGIAYCH--DRRVLHRDLKPQNLLIN---REGELKIADFGLARA  149 (288)
T ss_dssp             HHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECCTTHHHH
T ss_pred             HHH------------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHEEEc---CCCCEEEeECccccc
Confidence            000                        2334   677888888  99999999999999994   445799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..         
T Consensus       150 ~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---------  207 (288)
T 1ob3_A          150 FGIPVR--------KYTHEIVTLWYRAPDVLMG-----SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA---------  207 (288)
T ss_dssp             HCC-----------------CCCTTCCHHHHTT-----CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------
T ss_pred             cCcccc--------ccccccccccccCchheeC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------
Confidence            432211        1235689999999999863     245899999999999999999999999875321         


Q ss_pred             chhhHHHHHHHHhc--CCC----------------CCC---C----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQ--GHY----------------DFP---E----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~--~~~----------------~~p---~----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                            .....+..  +..                .++   .    ..+..+++++++||.+||..||++|||++|+|+|
T Consensus       208 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          208 ------DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             ------HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                  11112211  000                000   0    1124589999999999999999999999999999


Q ss_pred             CCccCC
Q psy16343        421 PWISTA  426 (539)
Q Consensus       421 pw~~~~  426 (539)
                      |||...
T Consensus       282 p~f~~~  287 (288)
T 1ob3_A          282 AYFKEN  287 (288)
T ss_dssp             GGGGC-
T ss_pred             cchhhc
Confidence            999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=7e-41  Score=334.24  Aligned_cols=269  Identities=31%  Similarity=0.487  Sum_probs=188.3

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      ...+.+.+.|.+ .+.||+|+||.||+|.+..++..||+|++.+.. ......+.+|++++..+ +||||+++++++.+.
T Consensus        15 ~~~g~i~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~   92 (285)
T 3is5_A           15 YFQGTIDDLFIF-KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDY   92 (285)
T ss_dssp             EESSCHHHHEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred             CCCCChhhheee-cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecC
Confidence            345678888987 578999999999999999999999999996532 33467888999999997 599999999999765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|      +|.+-                 + +              .+...+..      . ...     ..
T Consensus        93 ~~~~---lv------~e~~~-----------------~-~--------------~L~~~l~~------~-~~~-----~~  119 (285)
T 3is5_A           93 HNMY---IV------METCE-----------------G-G--------------ELLERIVS------A-QAR-----GK  119 (285)
T ss_dssp             SEEE---EE------ECCCS-----------------C-C--------------BHHHHHHH------H-HHH-----TC
T ss_pred             CeEE---EE------EEeCC-----------------C-C--------------cHHHHHHh------h-hhc-----cc
Confidence            4332   11      11110                 0 0              00000000      0 000     00


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      ..+ ...+|                        .+..+   ++.++.|+|  ++||+||||||+|||+...+..+.+||+
T Consensus       120 ~~~-~~~~~------------------------~i~~q---i~~~L~~LH--~~~ivH~dikp~NIl~~~~~~~~~~kl~  169 (285)
T 3is5_A          120 ALS-EGYVA------------------------ELMKQ---MMNALAYFH--SQHVVHKDLKPENILFQDTSPHSPIKII  169 (285)
T ss_dssp             CCC-HHHHH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCSGGGEEESSSSTTCCEEEC
T ss_pred             CCC-HHHHH------------------------HHHHH---HHHHHHHHH--hCCEEECCCCHHHEEEecCCCCCCEEEE
Confidence            000 00000                        02333   667788888  9999999999999999765556789999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||++.......         .....+||+.|+|||++.       ..|+.++|||||||++|+|++|..||.+.+    
T Consensus       170 Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~-------~~~~~~~Di~slG~il~~ll~g~~pf~~~~----  229 (285)
T 3is5_A          170 DFGLAELFKSDE---------HSTNAAGTALYMAPEVFK-------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----  229 (285)
T ss_dssp             CCCCCCC-------------------CTTGGGCCHHHHT-------TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----
T ss_pred             eeecceecCCcc---------cCcCcccccCcCChHHhc-------cCCCcccCeehHHHHHHHHHhCCCCCCCCC----
Confidence            999987543221         123568999999999985       358899999999999999999999998753    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                 ...+...+......++.. ...+++++++||.+||..||.+|||++|+|+||||+.
T Consensus       230 -----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          230 -----------LEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             -----------HHHHHHHHHHCCCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             -----------HHHHHhhhccCCcccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                       223444455444444332 2357999999999999999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-40  Score=342.54  Aligned_cols=262  Identities=25%  Similarity=0.321  Sum_probs=176.5

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-----CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-----~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .+.|++ .+.||+|+||.||+|.+..+|+.||||++......     ....+.+|++++..+ +||||++++++|.+...
T Consensus         9 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            9 AKRYEK-LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ----CE-EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTC
T ss_pred             hcccEE-EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCc
Confidence            345665 57899999999999999999999999999642211     124678999999997 59999999999976543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+   .|                       .++.-+ .               +...+.. .....+             
T Consensus        87 ~~---lv-----------------------~e~~~~-~---------------l~~~~~~~~~~~~~-------------  111 (346)
T 1ua2_A           87 IS---LV-----------------------FDFMET-D---------------LEVIIKDNSLVLTP-------------  111 (346)
T ss_dssp             CE---EE-----------------------EECCSE-E---------------HHHHHTTCCSSCCS-------------
T ss_pred             eE---EE-----------------------EEcCCC-C---------------HHHHHHhcCcCCCH-------------
Confidence            22   11                       111000 0               0000000 000000             


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                          ..++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       112 ----~~~~~------------------------~~~q---i~~~l~~lH--~~~ivH~Dlkp~Nil~~---~~~~~kl~D  155 (346)
T 1ua2_A          112 ----SHIKA------------------------YMLM---TLQGLEYLH--QHWILHRDLKPNNLLLD---ENGVLKLAD  155 (346)
T ss_dssp             ----SHHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTCCEEECC
T ss_pred             ----HHHHH------------------------HHHH---HHHHHHHHH--HCCEECCCCCHHHEEEc---CCCCEEEEe
Confidence                01110                        3333   667788888  99999999999999994   445799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+++.......        ...+.+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+.    
T Consensus       156 fg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~~~~~~~~----  218 (346)
T 1ua2_A          156 FGLAKSFGSPNR--------AYTHQVVTRWYRAPELLFG-----ARMYGVGVDMWAVGCILAELLLRVPFLPGDSD----  218 (346)
T ss_dssp             CGGGSTTTSCCC--------CCCCSCCCCTTCCHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----
T ss_pred             cccceeccCCcc--------cCCcccccccccCchHhhC-----CCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH----
Confidence            999876532221        2345789999999999863     24588999999999999999999999987642    


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCC------------------------CCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEG------------------------EWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~------------------------~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                                 ...+..|.......+..                        .+..+++++++||.+||..||.+|||++
T Consensus       219 -----------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  287 (346)
T 1ua2_A          219 -----------LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITAT  287 (346)
T ss_dssp             -----------HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred             -----------HHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHH
Confidence                       11222222210000111                        1245789999999999999999999999


Q ss_pred             HHhcCCCccCCCC
Q psy16343        416 SVLKHPWISTAGT  428 (539)
Q Consensus       416 e~l~Hpw~~~~~~  428 (539)
                      |+|+||||.....
T Consensus       288 ell~h~~f~~~~~  300 (346)
T 1ua2_A          288 QALKMKYFSNRPG  300 (346)
T ss_dssp             HHHTSGGGTSSSC
T ss_pred             HHhcChhhhcCCC
Confidence            9999999987544

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=5e-41  Score=363.31  Aligned_cols=264  Identities=23%  Similarity=0.321  Sum_probs=190.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||.||+|+++.+|+.||||++.+..   ......+.+|++++.++ +||||++++++|++....+  
T Consensus       186 ~f~~-~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~--  261 (543)
T 3c4z_A          186 WFLD-FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLC--  261 (543)
T ss_dssp             GEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE--
T ss_pred             heEE-EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEE--
Confidence            3443 468999999999999999999999999996431   22345788999999987 6999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+..           ... ....++. .
T Consensus       262 -lV------mE~~~-----------------g-g--------------~L~~~l~~-----------~~~-~~~~l~e-~  289 (543)
T 3c4z_A          262 -LV------MTIMN-----------------G-G--------------DIRYHIYN-----------VDE-DNPGFQE-P  289 (543)
T ss_dssp             -EE------ECCCT-----------------T-C--------------BHHHHHHT-----------SST-TSCSCCH-H
T ss_pred             -EE------EEecc-----------------C-C--------------CHHHHHHH-----------hhc-ccccccH-H
Confidence             11      12110                 0 0              00000000           000 0000000 0


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       290 ~~~------------------------~~~~q---i~~aL~~LH--~~gIvHrDLKP~NILl~---~~g~vkL~DFGla~  337 (543)
T 3c4z_A          290 RAI------------------------FYTAQ---IVSGLEHLH--QRNIIYRDLKPENVLLD---DDGNVRISDLGLAV  337 (543)
T ss_dssp             HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--HcCCcccCCChHHEEEe---CCCCEEEeecceee
Confidence            000                        02333   677788888  99999999999999994   45679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+.....        ...+.|||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.....       
T Consensus       338 ~~~~~~~--------~~~~~~GT~~Y~APE~l~~------~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-------  396 (543)
T 3c4z_A          338 ELKAGQT--------KTKGYAGTPGFMAPELLLG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-------  396 (543)
T ss_dssp             ECCTTCC--------CBCCCCSCTTTSCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-------
T ss_pred             eccCCCc--------ccccccCCccccChhhhcC------CCCChHHhcCcchHHHHHHHhCCCCCCCCccch-------
Confidence            6533221        1235699999999999963      579999999999999999999999998764221       


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                          ....+...|..+.+.+|.    .+|+++++||.+||.+||.+||+     ++++++||||....|
T Consensus       397 ----~~~~~~~~i~~~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          397 ----ENKELKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             ----CHHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             ----hHHHHHHHHhhcccCCCc----ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence                134567778888777774    68999999999999999999996     589999999997654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.7e-41  Score=348.13  Aligned_cols=263  Identities=26%  Similarity=0.402  Sum_probs=179.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|++ .+.||+|+||+||+|++..+++.||||++.+... ....+.+|+.+++.+ +|||||++++++.+....+  
T Consensus        18 ~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~--   92 (361)
T 3uc3_A           18 DSDRYDF-VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSL-RHPNIVRFKEVILTPTHLA--   92 (361)
T ss_dssp             CTTTEEE-EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE--
T ss_pred             CCCcEEE-EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEE--
Confidence            4566776 5789999999999999999999999999975432 345688999999987 5999999999997654433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .+|.-+ +              .+...+....-+..+                 
T Consensus        93 -lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~-----------------  116 (361)
T 3uc3_A           93 -II-----------------------MEYASG-G--------------ELYERICNAGRFSED-----------------  116 (361)
T ss_dssp             -EE-----------------------EECCCS-C--------------BHHHHHHHHSSCCHH-----------------
T ss_pred             -EE-----------------------EEeCCC-C--------------CHHHHHHhcCCCCHH-----------------
Confidence             11                       111000 0              000000000000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+.+|   ++.++.|+|  ++||+||||||+|||+... ..+.+||+|||+++
T Consensus       117 ~~~------------------------~i~~q---l~~~L~~LH--~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A          117 EAR------------------------FFFQQ---LLSGVSYCH--SMQICHRDLKLENTLLDGS-PAPRLKICDFGYSK  166 (361)
T ss_dssp             HHH------------------------HHHHH---HHHHHHHHH--HTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC-
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEcCC-CCceEEEeecCccc
Confidence            000                        03344   677888888  9999999999999999543 23459999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCC-cccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD-KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~-~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ......         .....+||+.|+|||++.+      ..|+ .++|||||||++|+|++|.+||.+.....      
T Consensus       167 ~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~------  225 (361)
T 3uc3_A          167 SSVLHS---------QPKSTVGTPAYIAPEVLLR------QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR------  225 (361)
T ss_dssp             -----------------------CTTSCHHHHHC------SSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC------
T ss_pred             cccccC---------CCCCCcCCCCcCChhhhcC------CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH------
Confidence            432211         1235689999999999974      3455 45999999999999999999998754322      


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           ........+....+.+|..  ..+++++++||++||.+||.+|||++|+++||||...
T Consensus       226 -----~~~~~~~~~~~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          226 -----DYRKTIQRILSVKYSIPDD--IRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             -----CHHHHHHHHHTTCCCCCTT--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             -----HHHHHHHHHhcCCCCCCCc--CCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                 1233556677777777653  4689999999999999999999999999999999654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=345.66  Aligned_cols=262  Identities=24%  Similarity=0.376  Sum_probs=171.8

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|++ .+.||+|+||.||+|.+..+++.||||++...... ....+.+|++++..+ +||||+++++++.+....+   .
T Consensus         3 ~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---l   77 (324)
T 3mtl_A            3 TYIK-LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLT---L   77 (324)
T ss_dssp             SEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEE---E
T ss_pred             ceEE-EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEE---E
Confidence            4554 47899999999999999999999999999643211 112345799999887 5999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .++.-+                .+...           +..    .....+ ...+
T Consensus        78 v-----------------------~e~~~~----------------~l~~~-----------~~~----~~~~~~-~~~~  102 (324)
T 3mtl_A           78 V-----------------------FEYLDK----------------DLKQY-----------LDD----CGNIIN-MHNV  102 (324)
T ss_dssp             E-----------------------EECCSE----------------EHHHH-----------HHH----TTTCCC-HHHH
T ss_pred             E-----------------------eccccc----------------CHHHH-----------HHh----cCCCCC-HHHH
Confidence            1                       111000                00000           000    000000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       103 ~---~---------------------~~~q---i~~aL~~LH--~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~  150 (324)
T 3mtl_A          103 K---L---------------------FLFQ---LLRGLAYCH--RQKVLHRDLKPQNLLIN---ERGELKLADFGLARAK  150 (324)
T ss_dssp             H---H---------------------HHHH---HHHHHHHHH--HTTEEESSCCGGGEEEC---TTCCEEECSSSEEECC
T ss_pred             H---H---------------------HHHH---HHHHHHHHH--HCCccCCCcCHHHEEEC---CCCCEEEccCcccccc
Confidence            0   0                     2334   667888888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..          
T Consensus       151 ~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----------  207 (324)
T 3mtl_A          151 SIPTK--------TYDNEVVTLWYRPPDILLG-----STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE----------  207 (324)
T ss_dssp             --------------------CGGGCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----------
T ss_pred             cCCcc--------ccccccCcccccChhhhcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----------
Confidence            32211        2235689999999999863     246899999999999999999999999876421          


Q ss_pred             hhhHHHHHHHHhcC-------------------CCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQG-------------------HYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~-------------------~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           .....+...                   .+.++.       ..+..+++++++||.+||+.||.+|||++|+|+|
T Consensus       208 -----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          208 -----EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             -----HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             -----HHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                 111121110                   011111       0123578999999999999999999999999999


Q ss_pred             CCccCCCCC
Q psy16343        421 PWISTAGTA  429 (539)
Q Consensus       421 pw~~~~~~~  429 (539)
                      |||......
T Consensus       283 p~f~~~~~~  291 (324)
T 3mtl_A          283 PFFLSLGER  291 (324)
T ss_dssp             GGGGGGCST
T ss_pred             hhhhhcccc
Confidence            999876543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.3e-40  Score=340.25  Aligned_cols=274  Identities=20%  Similarity=0.254  Sum_probs=182.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      -+.|++ .+.||+|+||.||+|++..+|+.||||++....  ......+.+|++++..+ +||||+++++++.+....+.
T Consensus        16 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           16 VSKYEK-LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             GGGEEE-EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC-----
T ss_pred             ccceeE-EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccc
Confidence            456765 578999999999999999999999999985432  22345678999999997 59999999999876532110


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..        ...+.          -+.++.-+.                +...           +..    .....+ .
T Consensus        94 ~~--------~~~~~----------lv~e~~~~~----------------l~~~-----------l~~----~~~~~~-~  123 (351)
T 3mi9_A           94 RC--------KGSIY----------LVFDFCEHD----------------LAGL-----------LSN----VLVKFT-L  123 (351)
T ss_dssp             -----------CEEE----------EEEECCSEE----------------HHHH-----------HHC----TTSCCC-H
T ss_pred             cC--------CceEE----------EEEeccCCC----------------HHHH-----------Hhh----ccCCCC-H
Confidence            00        00000          112221000                0000           000    000000 0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..++   .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       124 ~~~~---~---------------------i~~q---i~~~l~~LH--~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~a  171 (351)
T 3mi9_A          124 SEIK---R---------------------VMQM---LLNGLYYIH--RNKILHRDMKAANVLIT---RDGVLKLADFGLA  171 (351)
T ss_dssp             HHHH---H---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             HHHH---H---------------------HHHH---HHHHHHHHH--HCCeeCCCCCHHHEEEc---CCCCEEEccchhc
Confidence            0000   0                     3334   667788888  99999999999999994   4457999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +........    ........+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+.        
T Consensus       172 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------  234 (351)
T 3mi9_A          172 RAFSLAKNS----QPNRYTNRVVTLWYRPPELLLG-----ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--------  234 (351)
T ss_dssp             EECCCCSSS----SCCCCCSSCSCGGGCCHHHHTT-----CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------
T ss_pred             ccccccccc----cccccCCcccccCccCchhhcC-----CCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--------
Confidence            755422211    1112346789999999999863     24589999999999999999999999987542        


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCC----------------------------CCHHHHHHHHHhccccccCCCCHH
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWST----------------------------ISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~----------------------------~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                             ......+......++...|..                            .++++++||.+||..||.+|||++
T Consensus       235 -------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  307 (351)
T 3mi9_A          235 -------QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD  307 (351)
T ss_dssp             -------HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             -------HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHH
Confidence                   122333332222233333332                            278899999999999999999999


Q ss_pred             HHhcCCCccCCC
Q psy16343        416 SVLKHPWISTAG  427 (539)
Q Consensus       416 e~l~Hpw~~~~~  427 (539)
                      |+|+||||....
T Consensus       308 e~l~hp~f~~~~  319 (351)
T 3mi9_A          308 DALNHDFFWSDP  319 (351)
T ss_dssp             HHHTSGGGGSSS
T ss_pred             HHhCCCCcCCCC
Confidence            999999998643

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-40  Score=345.41  Aligned_cols=281  Identities=23%  Similarity=0.310  Sum_probs=177.3

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.|++ .+.||+|+||.||+|.+..+|+.||||++.+....  ...++.+|++++.++ +||||+++++++......
T Consensus        22 ~~~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~   99 (367)
T 1cm8_A           22 EVRAVYRD-LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETL   99 (367)
T ss_dssp             CCBSSEEE-EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSST
T ss_pred             eecceEEE-eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCcc
Confidence            34566775 57899999999999999999999999999653222  245678999999997 599999999998765321


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ..   .      .+..+           +.++. + +              .+...           +..      ...+
T Consensus       100 ~~---~------~~~~l-----------v~e~~-~-~--------------~L~~~-----------~~~------~~l~  126 (367)
T 1cm8_A          100 DD---F------TDFYL-----------VMPFM-G-T--------------DLGKL-----------MKH------EKLG  126 (367)
T ss_dssp             TT---C------CCCEE-----------EEECC-S-E--------------EHHHH-----------HHH------CCCC
T ss_pred             cc---C------ceEEE-----------EEecC-C-C--------------CHHHH-----------Hhc------CCCC
Confidence            10   0      00011           11111 0 0              00000           000      0000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                      . ..+   -.                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       127 ~-~~~---~~---------------------~~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg  173 (367)
T 1cm8_A          127 E-DRI---QF---------------------LVYQ---MLKGLRYIH--AAGIIHRDLKPGNLAVN---EDCELKILDFG  173 (367)
T ss_dssp             H-HHH---HH---------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCCT
T ss_pred             H-HHH---HH---------------------HHHH---HHHHHHHHH--HCCccccCcCHHHEEEc---CCCCEEEEeee
Confidence            0 000   01                     2333   667788888  99999999999999994   44579999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++....           .....+||++|+|||++.+     ...|+.++||||+||++|+|++|++||.+.+..++...
T Consensus       174 ~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~  237 (367)
T 1cm8_A          174 LARQADS-----------EMTGYVVTRWYRAPEVILN-----WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE  237 (367)
T ss_dssp             TCEECCS-----------SCCSSCSCGGGCCTHHHHT-----TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             ccccccc-----------ccCcCcCCCCcCCHHHHhC-----CCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9875432           1235689999999999873     24689999999999999999999999987643211000


Q ss_pred             cCccchhhHHHHHHH--------HhcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        362 RGETCHACQEILFHS--------IQQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~--------i~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      .......+.......        ........+..    .+..++++++|||.+||+.||.+|||++|+|+||||.....
T Consensus       238 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          238 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             HHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence            000000000000000        00011111111    23567999999999999999999999999999999987543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.2e-40  Score=345.18  Aligned_cols=281  Identities=24%  Similarity=0.295  Sum_probs=169.7

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.|++ .+.||+|+||.||+|.+..+|+.||||++.+...  ....++.+|++++..+ +||||+++++++......
T Consensus        26 ~~~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~  103 (367)
T 2fst_X           26 EVPERYQN-LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL  103 (367)
T ss_dssp             EEETTEEE-EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSG
T ss_pred             CCCCceEE-eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCcc
Confidence            45566776 5789999999999999999999999999965322  2345678999999997 599999999998654321


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ...          ..+.          -+.++. + +              .+...+.. .-+..+              
T Consensus       104 ~~~----------~~~~----------lv~e~~-~-~--------------~L~~~~~~-~~l~~~--------------  132 (367)
T 2fst_X          104 EEF----------NDVY----------LVTHLM-G-A--------------DLNNIVKC-QKLTDD--------------  132 (367)
T ss_dssp             GGC----------CCCE----------EEEECC-C-E--------------ECC------CCCCHH--------------
T ss_pred             ccC----------CeEE----------EEeccc-C-C--------------CHHHHHhc-CCCCHH--------------
Confidence            100          0000          111110 0 0              00000000 000000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                         .++   .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       133 ---~~~---~---------------------i~~q---i~~aL~~LH--~~givH~Dlkp~NIll~---~~~~~kL~DFG  177 (367)
T 2fst_X          133 ---HVQ---F---------------------LIYQ---ILRGLKYIH--SADIIHRDLKPSNLAVN---EDCELKILDFG  177 (367)
T ss_dssp             ---HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTCCEEECC--
T ss_pred             ---HHH---H---------------------HHHH---HHHHHHHHH--HCCeeeCCCCHhhEEEC---CCCCEEEeecc
Confidence               000   0                     2333   667888888  99999999999999994   44579999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++....           .....+||++|+|||++.+     ...|+.++|||||||++|+|++|++||.+.+..+....
T Consensus       178 ~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~  241 (367)
T 2fst_X          178 LARHTAD-----------EMTGYVATRWYRAPEIMLN-----WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL  241 (367)
T ss_dssp             ------------------------CCCTTCCHHHHTT-----CCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccccccc-----------cCCCcCcCcCccChHHHcC-----CcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9875421           1235689999999999863     24689999999999999999999999987643211000


Q ss_pred             cCccchhhHHHH--------HHHHhcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        362 RGETCHACQEIL--------FHSIQQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       362 ~~~~~~~~~~~~--------~~~i~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      .......+....        ...........+..    .+..++++++|||.+||+.||.+|||++|+|+||||.....
T Consensus       242 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             HHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence            000000000000        00000111111211    13467899999999999999999999999999999986543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.4e-40  Score=333.42  Aligned_cols=271  Identities=36%  Similarity=0.576  Sum_probs=195.5

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---------CCHHHHHHHHHHHHhhcCCCCeeeee
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---------HSRSRVFKEVETFHHCQGHPNIIQLL  112 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---------~~~~~~~~Ei~~l~~~~~HpnIv~l~  112 (539)
                      ...|.+.|++ .+.||+|+||.||+|.+..+++.||||+++....         .....+.+|++++.++.+||||++++
T Consensus        12 ~~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~   90 (298)
T 1phk_A           12 THGFYENYEP-KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLK   90 (298)
T ss_dssp             ---CTTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             Ccchhhccce-eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeee
Confidence            3457778886 5789999999999999999999999999965321         11345778999999987799999999


Q ss_pred             eeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccc
Q psy16343        113 EYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  192 (539)
Q Consensus       113 ~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~  192 (539)
                      +++.+....+    +                      +.++--+ +              .+...+.....+.+      
T Consensus        91 ~~~~~~~~~~----l----------------------v~e~~~~-~--------------~L~~~l~~~~~~~~------  123 (298)
T 1phk_A           91 DTYETNTFFF----L----------------------VFDLMKK-G--------------ELFDYLTEKVTLSE------  123 (298)
T ss_dssp             EEEECSSEEE----E----------------------EEECCTT-C--------------BHHHHHHHHSSCCH------
T ss_pred             eeeccCCeEE----E----------------------EEeccCC-C--------------cHHHHHhccCCCCH------
Confidence            9987654322    1                      1111000 0              00000000000000      


Q ss_pred             cCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC
Q psy16343        193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL  272 (539)
Q Consensus       193 ~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~  272 (539)
                                 ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..
T Consensus       124 -----------~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~  160 (298)
T 1phk_A          124 -----------KETRK------------------------IMRA---LLEVICALH--KLNIVHRDLKPENILLD---DD  160 (298)
T ss_dssp             -----------HHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TT
T ss_pred             -----------HHHHH------------------------HHHH---HHHHHHHHH--HCCcccCCCCcceEEEc---CC
Confidence                       01111                        2333   667778888  99999999999999994   44


Q ss_pred             CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  352 (539)
Q Consensus       273 ~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~  352 (539)
                      +.+||+|||++.......         .....+||+.|+|||++..........|+.++|||||||++|+|++|..||.+
T Consensus       161 ~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  231 (298)
T 1phk_A          161 MNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH  231 (298)
T ss_dssp             CCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CcEEEecccchhhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence            569999999987543221         23456899999999998632111134688899999999999999999999976


Q ss_pred             CCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .+               .......+..+.+.++...|..++.++++||.+||..||.+|||++|+|+||||....
T Consensus       232 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          232 RK---------------QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             SS---------------HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             cc---------------HHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            43               2345667778888888878888999999999999999999999999999999998653

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.1e-40  Score=338.66  Aligned_cols=266  Identities=30%  Similarity=0.547  Sum_probs=188.9

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--------CCHHHHHHHHHHHHhhcCCCCeeeeeeee
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--------HSRSRVFKEVETFHHCQGHPNIIQLLEYY  115 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~  115 (539)
                      .+.+.|++ .+.||+|+||.||+|.+..+++.||||++.+...        .....+.+|++++..+ +||||+++++++
T Consensus         7 ~l~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   84 (322)
T 2ycf_A            7 ALRDEYIM-SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF   84 (322)
T ss_dssp             HHHHHEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEE
T ss_pred             hhhhceeE-eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEE
Confidence            45677876 5789999999999999999999999999964321        1123477899999997 699999999988


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      ..... +    +                      +.++--+ +              .+...+.....+..         
T Consensus        85 ~~~~~-~----l----------------------v~e~~~~-~--------------~L~~~~~~~~~~~~---------  113 (322)
T 2ycf_A           85 DAEDY-Y----I----------------------VLELMEG-G--------------ELFDKVVGNKRLKE---------  113 (322)
T ss_dssp             ESSSE-E----E----------------------EEECCTT-E--------------ETHHHHSTTCCCCH---------
T ss_pred             cCCce-E----E----------------------EEecCCC-C--------------cHHHHHhccCCCCH---------
Confidence            65431 1    1                      1111000 0              00000000000000         


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                              ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+...+....+
T Consensus       114 --------~~~~~------------------------~~~q---i~~~l~~lH--~~~ivH~dlkp~NIl~~~~~~~~~~  156 (322)
T 2ycf_A          114 --------ATCKL------------------------YFYQ---MLLAVQYLH--ENGIIHRDLKPENVLLSSQEEDCLI  156 (322)
T ss_dssp             --------HHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEESSSSSSCCE
T ss_pred             --------HHHHH------------------------HHHH---HHHHHHHHH--HCCeeccCCCHHHEEEecCCCCCeE
Confidence                    00110                        2233   667788888  9999999999999999765555569


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||++.......         ...+.+||+.|+|||++...   ....|+.++|||||||++|+|++|.+||.+...
T Consensus       157 kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  224 (322)
T 2ycf_A          157 KITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSV---GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT  224 (322)
T ss_dssp             EECCCTTCEECCCCH---------HHHHHHSCCTTCCHHHHHHT---TTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred             EEccCccceeccccc---------ccccccCCcCccCchhhccC---CCCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence            999999987543211         12356899999999998531   124688999999999999999999999976542


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ..              .+...+..+.+.++...|..+++++++||.+||..||.+|||++|+|+||||..
T Consensus       225 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          225 QV--------------SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             SS--------------CHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HH--------------HHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            21              144566677777666667789999999999999999999999999999999964

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.6e-40  Score=348.72  Aligned_cols=284  Identities=20%  Similarity=0.288  Sum_probs=178.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ....|++ .++||+|+||+||+|++..+|+.||||++.+...    ...+|+++|+.+ +|||||+++++|.......  
T Consensus        52 ~~~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~--  123 (420)
T 1j1b_A           52 QEVSYTD-TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKK--  123 (420)
T ss_dssp             EEEEEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTT--
T ss_pred             ccceEEe-eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHc-CCCCccceeeEEeccCCCC--
Confidence            3445665 5789999999999999999999999999864321    234799999987 5999999999885422100  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .-       ..+.          -+.+|.-+ .               +..           .+..+.. .....    
T Consensus       124 -~~-------~~~~----------lv~e~~~~-~---------------l~~-----------~~~~~~~-~~~~l----  153 (420)
T 1j1b_A          124 -DE-------VYLN----------LVLDYVPE-T---------------VYR-----------VARHYSR-AKQTL----  153 (420)
T ss_dssp             -TE-------EEEE----------EEEECCCE-E---------------HHH-----------HHHHHHH-TTCCC----
T ss_pred             -cc-------eeEE----------eehhcccc-c---------------HHH-----------HHHHHhh-ccCCC----
Confidence             00       0000          01111000 0               000           0000000 00000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      +.-..-.                     +..|   ++.++.|+|  ++||+||||||+|||+..+  .+.+||+|||+++
T Consensus       154 ~~~~~~~---------------------~~~q---i~~aL~~LH--~~~ivHrDlkp~NILl~~~--~~~~kl~DFG~a~  205 (420)
T 1j1b_A          154 PVIYVKL---------------------YMYQ---LFRSLAYIH--SFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAK  205 (420)
T ss_dssp             CHHHHHH---------------------HHHH---HHHHHHHHH--TTTEECSCCSGGGEEEETT--TTEEEECCCTTCE
T ss_pred             CHHHHHH---------------------HHHH---HHHHHHHHH--HCCccccCCChhhEEEeCC--CCeEEeccchhhh
Confidence            0000000                     2333   667788888  9999999999999999632  2358999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......         ...+.+||++|+|||++.+     ...|+.++||||||||+|+|++|++||.+.+..+.......
T Consensus       206 ~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~  271 (420)
T 1j1b_A          206 QLVRGE---------PNVSYICSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK  271 (420)
T ss_dssp             ECCTTC---------CCCSCCSCTTSCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             hcccCC---------CceeeeeCCCcCCHHHHcC-----CCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            543221         1235689999999999863     24689999999999999999999999988643211000000


Q ss_pred             cchhhHHHHHHHHh--cCCCCCCC---CCC-----CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQ--QGHYDFPE---GEW-----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~--~~~~~~p~---~~~-----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ....+....+..+.  ...+.+|.   ..|     ..++++++|||++||++||.+|||+.|+|+||||.....
T Consensus       272 ~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          272 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             HHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             HhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence            00000000001110  01223332   112     356899999999999999999999999999999976543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.7e-41  Score=358.72  Aligned_cols=276  Identities=23%  Similarity=0.304  Sum_probs=175.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc-----CCCCeeeeeeeecccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-----GHPNIIQLLEYYEDDE  119 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~-----~HpnIv~l~~~~~~~~  119 (539)
                      +...|++ .+.||+|+||.||+|.+..+++.||||++... ......+.+|++++..+.     +|+||+++++++....
T Consensus        95 ~~~ry~~-~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           95 VAYRYEV-LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             ETTTEEE-EEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             ccCcEEE-EEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            3344665 57899999999999999999999999999642 122356678888887753     5789999999987654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|      +|.+-                 +                .+...           +...   ....
T Consensus       173 ~~~---lv------~e~~~-----------------~----------------~L~~~-----------l~~~---~~~~  196 (429)
T 3kvw_A          173 HIC---MT------FELLS-----------------M----------------NLYEL-----------IKKN---KFQG  196 (429)
T ss_dssp             EEE---EE------ECCCC-----------------C----------------BHHHH-----------HHHT---TTCC
T ss_pred             eEE---EE------EeccC-----------------C----------------CHHHH-----------HHhc---cCCC
Confidence            322   11      11000                 0                00000           0000   0000


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      ++. ..++                        .+..|   ++.++.|+|  ++||+||||||+|||+..++. ..+||+|
T Consensus       197 ~~~-~~~~------------------------~i~~q---i~~aL~~LH--~~~ivHrDlKp~NILl~~~~~-~~vkL~D  245 (429)
T 3kvw_A          197 FSL-PLVR------------------------KFAHS---ILQCLDALH--KNRIIHCDLKPENILLKQQGR-SGIKVID  245 (429)
T ss_dssp             CCH-HHHH------------------------HHHHH---HHHHHHHHH--HHTEECSCCSGGGEEESSTTS-CCEEECC
T ss_pred             CCH-HHHH------------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHeEEccCCC-cceEEee
Confidence            000 0000                        03334   677888888  899999999999999964322 3499999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||++.....           ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+..
T Consensus       246 FG~a~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l  308 (429)
T 3kvw_A          246 FGSSCYEHQ-----------RVYTYIQSRFYRAPEVILG------ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL  308 (429)
T ss_dssp             CTTCEETTC-----------CCCSSCSCGGGCCHHHHHT------BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             cccceecCC-----------cccccCCCCCccChHHHhC------CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            999864321           2346799999999999974      46899999999999999999999999876432110


Q ss_pred             cccCccchhhHHHHHHHH-------hc-CCC-------------------------CCCC--CCC-----CCCCHHHHHH
Q psy16343        360 WQRGETCHACQEILFHSI-------QQ-GHY-------------------------DFPE--GEW-----STISDEAKDL  399 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i-------~~-~~~-------------------------~~p~--~~~-----~~~s~~~~dl  399 (539)
                      ....+....+...+....       .. +..                         ..+.  ..|     ...+++++||
T Consensus       309 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl  388 (429)
T 3kvw_A          309 ACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF  388 (429)
T ss_dssp             HHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHH
T ss_pred             HHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHH
Confidence            000000000000000000       00 000                         0000  011     1247899999


Q ss_pred             HHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        400 IRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       400 i~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      |.+||+.||++|||++|+|+||||+..
T Consensus       389 i~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          389 LKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             HHHHCCCChhhCCCHHHHhCChhhccC
Confidence            999999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=5.9e-40  Score=333.58  Aligned_cols=252  Identities=25%  Similarity=0.395  Sum_probs=181.2

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .+.||+|+||.||+|++..+|+.||||++..........+.+|+.++..+ +||||+++++++......+   .|     
T Consensus        50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~---lv-----  120 (321)
T 2c30_A           50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELW---VL-----  120 (321)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE---EE-----
T ss_pred             cEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEE---EE-----
Confidence            35799999999999999999999999999765555567788999999987 5999999999987654332   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                       +|.+-                 + +              .+...+.... +.++                 .++   . 
T Consensus       121 -~e~~~-----------------~-~--------------~L~~~l~~~~-l~~~-----------------~~~---~-  145 (321)
T 2c30_A          121 -MEFLQ-----------------G-G--------------ALTDIVSQVR-LNEE-----------------QIA---T-  145 (321)
T ss_dssp             -ECCCC-----------------S-C--------------BHHHHHTTCC-CCHH-----------------HHH---H-
T ss_pred             -EecCC-----------------C-C--------------CHHHHHHhcC-CCHH-----------------HHH---H-
Confidence             11110                 0 0              0000000000 0000                 000   0 


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV  292 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~  292 (539)
                                          +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++........ 
T Consensus       146 --------------------i~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~-  196 (321)
T 2c30_A          146 --------------------VCEA---VLQALAYLH--AQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP-  196 (321)
T ss_dssp             --------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSSSC-
T ss_pred             --------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHEEEC---CCCcEEEeeeeeeeecccCcc-
Confidence                                2333   667788888  89999999999999994   345699999999875432211 


Q ss_pred             CCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHH
Q psy16343        293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI  372 (539)
Q Consensus       293 ~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~  372 (539)
                             .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+               ...
T Consensus       197 -------~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~pf~~~~---------------~~~  248 (321)
T 2c30_A          197 -------KRKSLVGTPYWMAPEVISR------SLYATEVDIWSLGIMVIEMVDGEPPYFSDS---------------PVQ  248 (321)
T ss_dssp             -------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---------------HHH
T ss_pred             -------ccccccCCccccCHhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------------HHH
Confidence                   1235689999999999863      468899999999999999999999997653               122


Q ss_pred             HHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       373 ~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ....+........ ..+..+++++++||.+||..||.+|||++|+++||||...
T Consensus       249 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          249 AMKRLRDSPPPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HHHHHHHSSCCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             HHHHHhcCCCCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence            3444544432211 1234689999999999999999999999999999999754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=5.6e-41  Score=345.94  Aligned_cols=261  Identities=22%  Similarity=0.287  Sum_probs=176.5

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc----CCCCeeeeeeeecccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ----GHPNIIQLLEYYEDDE  119 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~----~HpnIv~l~~~~~~~~  119 (539)
                      .+.+.|++ .+.||+|+||.||+|++..+++.||||++.+.. .......+|++++..+.    +|||||++++++....
T Consensus        32 ~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~  109 (360)
T 3llt_A           32 LLNNAFLV-IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD  109 (360)
T ss_dssp             EETTTEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred             EecCEEEE-EEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence            35667776 478999999999999999999999999996421 22345677999998875    5999999999987654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|      +|                 +. + +              .+...           +...   ....
T Consensus       110 ~~~---lv------~e-----------------~~-~-~--------------~L~~~-----------~~~~---~~~~  133 (360)
T 3llt_A          110 HMC---LI------FE-----------------PL-G-P--------------SLYEI-----------ITRN---NYNG  133 (360)
T ss_dssp             EEE---EE------EC-----------------CC-C-C--------------BHHHH-----------HHHT---TTCC
T ss_pred             eeE---EE------Ec-----------------CC-C-C--------------CHHHH-----------HHhc---CCCC
Confidence            322   11      11                 10 0 0              00000           0000   0000


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC---------
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD---------  270 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~---------  270 (539)
                      .. ..+++   .                     +..|   ++.++.|+|  ++||+||||||+|||+....         
T Consensus       134 ~~-~~~~~---~---------------------i~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~~~~~~~~~~~~~  183 (360)
T 3llt_A          134 FH-IEDIK---L---------------------YCIE---ILKALNYLR--KMSLTHTDLKPENILLDDPYFEKSLITVR  183 (360)
T ss_dssp             CC-HHHHH---H---------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEESCTTCCEEEEEEE
T ss_pred             CC-HHHHH---H---------------------HHHH---HHHHHHHHH--HCCeeeCCCCcccEEEccccccccccchh
Confidence            00 00000   0                     2333   677888888  99999999999999996421         


Q ss_pred             -------------CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhh
Q psy16343        271 -------------QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  337 (539)
Q Consensus       271 -------------~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlG  337 (539)
                                   ..+.+||+|||+++.....           ..+.+||+.|+|||++.+      ..|+.++||||||
T Consensus       184 ~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG  246 (360)
T 3llt_A          184 RVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILN------LGWDVSSDMWSFG  246 (360)
T ss_dssp             CTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTT------CCCCTTHHHHHHH
T ss_pred             cccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcC------CCCCCccchHHHH
Confidence                         2467999999998743211           235689999999999963      4689999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCC--------------------------CCCCC---
Q psy16343        338 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD--------------------------FPEGE---  388 (539)
Q Consensus       338 vily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------------------------~p~~~---  388 (539)
                      |++|+|++|.+||.+.+..+               ....+......                          +|...   
T Consensus       247 ~il~ell~g~~pf~~~~~~~---------------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  311 (360)
T 3llt_A          247 CVLAELYTGSLLFRTHEHME---------------HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSI  311 (360)
T ss_dssp             HHHHHHHHSSCSCCCSSHHH---------------HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCH
T ss_pred             HHHHHHHHCCCCCCCCcHHH---------------HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccch
Confidence            99999999999998754211               11111111111                          11100   


Q ss_pred             -------------CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        389 -------------WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       389 -------------~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                   ....++++.+||.+||+.||.+|||++|+|+||||+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          312 NSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                         001247788999999999999999999999999995

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.6e-40  Score=343.54  Aligned_cols=283  Identities=22%  Similarity=0.323  Sum_probs=181.8

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.+.|++ .+.||+|+||.||+|.+..++..||||++..... .....+.+|++++.++ +||||+++++++....... 
T Consensus        25 ~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-  101 (364)
T 3qyz_A           25 VGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQ-  101 (364)
T ss_dssp             CTTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTT-
T ss_pred             ccccEEE-EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccc-
Confidence            3456776 5789999999999999999999999999964332 2235678999999997 5999999999986543211 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                ...+.+          +.++  ..+              .+...+.. ..+..+                
T Consensus       102 ----------~~~~~i----------v~e~--~~~--------------~L~~~l~~-~~~~~~----------------  128 (364)
T 3qyz_A          102 ----------MKDVYI----------VQDL--MET--------------DLYKLLKT-QHLSND----------------  128 (364)
T ss_dssp             ----------CCCEEE----------EEEC--CSE--------------EHHHHHHH-CCCCHH----------------
T ss_pred             ----------cceEEE----------EEcc--cCc--------------CHHHHHHh-CCCCHH----------------
Confidence                      000110          1111  000              00000000 000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       129 -~~~------------------------~i~~q---i~~aL~~LH--~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          129 -HIC------------------------YFLYQ---ILRGLKYIH--SANVLHRDLKPSNLLLN---TTCDLKICDFGLA  175 (364)
T ss_dssp             -HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             -HHH------------------------HHHHH---HHHHHHHHH--HCCeecCCCChHhEEEC---CCCCEEEEeCcce
Confidence             000                        03334   677888888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +........     .....+.+||+.|+|||++..     ...|+.++|||||||++|+|++|.+||.+.+..+......
T Consensus       176 ~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  245 (364)
T 3qyz_A          176 RVADPDHDH-----TGFLTEYVATRWYRAPEIMLN-----SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  245 (364)
T ss_dssp             EECCGGGCB-----CCTTCCCCSCGGGCCHHHHHT-----BCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH
T ss_pred             EecCCCCCc-----cccccccccccCCCCCHHhcC-----CCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            754332211     112346799999999998763     3458999999999999999999999998765332100000


Q ss_pred             ccchhhHHHHHHHH-----hcCCCCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSI-----QQGHYDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i-----~~~~~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      .............+     ......++.       ..+..+++++++||.+||.+||.+|||++|+|+||||...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            00000000000000     000000111       0124679999999999999999999999999999999865

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.1e-40  Score=341.28  Aligned_cols=313  Identities=28%  Similarity=0.388  Sum_probs=195.0

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC-----CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeec
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL-----PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYE  116 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~-----~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~  116 (539)
                      ...+.+.|++ .+.||+|+||.||+|.+..++..||||++.+.     .......+.+|++++..+ +||||+++++++.
T Consensus        21 ~~~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~   98 (345)
T 3hko_A           21 LLELQKKYHL-KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYE   98 (345)
T ss_dssp             HHHHHHHEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hhhhhhheee-cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhc
Confidence            3446777886 57899999999999999999999999998642     223456788999999997 5999999999998


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +....+   .|      +|.+--   +... -.+..+.     ..... .. . ............+...+.....    
T Consensus        99 ~~~~~~---lv------~e~~~g---g~L~-~~l~~~~-----~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~----  153 (345)
T 3hko_A           99 DEQYIC---LV------MELCHG---GHLL-DKLNVFI-----DDSTG-KC-A-MDVVKTQICPCPECNEEAINGS----  153 (345)
T ss_dssp             CSSEEE---EE------EECCCS---CBHH-HHEEEEE-----ETTTT-EE-E-EEEECCCCCCSHHHHHHHHHSC----
T ss_pred             cCCeEE---EE------EeCCCC---CcHH-HHHHHhh-----ccccc-cc-c-cccccccccccccccccccccc----
Confidence            765433   11      111100   0000 0000000     00000 00 0 0000000000000000000000    


Q ss_pred             CCCCCcc-cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        197 ASGYDKR-CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       197 ~~~~~~~-~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                      ....... .-......+ ..                 +..+   ++.++.|+|  ++||+||||||+|||+..++ ...+
T Consensus       154 ~~~~~~~~~~~~~~~~~-~~-----------------i~~q---i~~~l~~LH--~~~ivH~Dlkp~NIll~~~~-~~~~  209 (345)
T 3hko_A          154 IHGFRESLDFVQREKLI-SN-----------------IMRQ---IFSALHYLH--NQGICHRDIKPENFLFSTNK-SFEI  209 (345)
T ss_dssp             C--CEEECCHHHHHHHH-HH-----------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEESCSS-SCCE
T ss_pred             cccccccccccccHHHH-HH-----------------HHHH---HHHHHHHHH--HCCccccCCChhhEEEecCC-CceE
Confidence            0000000 000000000 00                 2334   667788888  99999999999999996432 2369


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||+++.+.......    .......+||+.|+|||++..    ....|+.++|||||||++|+|++|.+||.+.+ 
T Consensus       210 kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-  280 (345)
T 3hko_A          210 KLVDFGLSKEFYKLNNGE----YYGMTTKAGTPYFVAPEVLNT----TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN-  280 (345)
T ss_dssp             EECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTC----SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred             EEeeccccccccccCccc----cccccccCCCccccCchhhcc----CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-
Confidence            999999987543221100    012346689999999999863    12468899999999999999999999998753 


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                    .......+..+...++...|..+++++++||.+||..||.+|||+.|+|+||||.....
T Consensus       281 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          281 --------------DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             --------------HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             --------------hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence                          23355666777777777777789999999999999999999999999999999987543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=7.6e-41  Score=342.32  Aligned_cols=274  Identities=34%  Similarity=0.631  Sum_probs=168.1

Q ss_pred             ccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        41 ~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ....+.+.|++..++||+|+||.||+|.+..+++.||||++.+.     ....+|+..+.+..+||||++++++|.....
T Consensus        22 ~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~   96 (336)
T 3fhr_A           22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHH   96 (336)
T ss_dssp             BCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             CCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence            34567888988677899999999999999999999999999642     3345566655555689999999999865321


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ...            .+.          -+.++.-+ +              .+...+...              ....+
T Consensus        97 ~~~------------~~~----------lv~e~~~g-g--------------~L~~~l~~~--------------~~~~l  125 (336)
T 3fhr_A           97 GKR------------CLL----------IIMECMEG-G--------------ELFSRIQER--------------GDQAF  125 (336)
T ss_dssp             TEE------------EEE----------EEEECCTT-E--------------EHHHHHHTC---------------CCCC
T ss_pred             CCc------------eEE----------EEEeccCC-C--------------CHHHHHHhc--------------CCCCC
Confidence            000            000          01111100 0              000000000              00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..++..+.+||+||
T Consensus       126 ~-~~~~~~------------------------i~~q---l~~~l~~LH--~~~ivH~dlkp~NIll~~~~~~~~~kl~Df  175 (336)
T 3fhr_A          126 T-EREAAE------------------------IMRD---IGTAIQFLH--SHNIAHRDVKPENLLYTSKEKDAVLKLTDF  175 (336)
T ss_dssp             B-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred             C-HHHHHH------------------------HHHH---HHHHHHHHH--hCCeecCCCCHHHEEEEecCCCceEEEecc
Confidence            0 001110                        3334   667788888  999999999999999976655667999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+++.....          ...+.+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+......  
T Consensus       176 g~~~~~~~~----------~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--  237 (336)
T 3fhr_A          176 GFAKETTQN----------ALQTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI--  237 (336)
T ss_dssp             TTCEEC--------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred             ccceecccc----------ccccCCCCcCccChhhhCC------CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh--
Confidence            998754321          1235689999999999852      4688899999999999999999999987643221  


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                               .......+..+.+.++...|..+++++++||.+||..||.+|||++|+|+||||....
T Consensus       238 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          238 ---------SPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             ----------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             ---------hhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence                     1122345556677788888889999999999999999999999999999999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=8.5e-41  Score=347.94  Aligned_cols=264  Identities=24%  Similarity=0.364  Sum_probs=177.1

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCC-----eeeeeeeeccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPN-----IIQLLEYYEDD  118 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~Hpn-----Iv~l~~~~~~~  118 (539)
                      .+.+.|++ .+.||+|+||.||+|.+..+++.||||++++.. .....+.+|+.++..+..|+|     |+++++++...
T Consensus        51 ~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           51 KWMDRYEI-DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             EETTTEEE-EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             EeeeeEEE-EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            35667776 578999999999999999999999999996421 223456778888887765664     88888888765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|                       .++  ..+              .+...           +...   ...
T Consensus       129 ~~~~---lv-----------------------~e~--~~~--------------~L~~~-----------l~~~---~~~  152 (382)
T 2vx3_A          129 NHLC---LV-----------------------FEM--LSY--------------NLYDL-----------LRNT---NFR  152 (382)
T ss_dssp             TEEE---EE-----------------------EEC--CCC--------------BHHHH-----------HHHT---TTS
T ss_pred             CceE---EE-----------------------Eec--CCC--------------CHHHH-----------Hhhc---CcC
Confidence            4322   11                       111  000              00000           0000   000


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      ..       +...+.                  .+..|   ++.++.|+|.|++||+||||||+|||+..+ ..+.+||+
T Consensus       153 ~~-------~~~~~~------------------~i~~q---i~~al~~lH~~~~~ivHrDlkp~NIll~~~-~~~~~kL~  203 (382)
T 2vx3_A          153 GV-------SLNLTR------------------KFAQQ---MCTALLFLATPELSIIHCDLKPENILLCNP-KRSAIKIV  203 (382)
T ss_dssp             CC-------CHHHHH------------------HHHHH---HHHHHHHHTSTTTCEECCCCSGGGEEESST-TSCCEEEC
T ss_pred             CC-------CHHHHH------------------HHHHH---HHHHHHHhccCCCCEEcCCCCcccEEEecC-CCCcEEEE
Confidence            00       000000                  03334   678899999888999999999999999642 24569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+++....           ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+ 
T Consensus       204 DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~-  265 (382)
T 2vx3_A          204 DFGSSCQLGQ-----------RIYQYIQSRFYRSPEVLLG------MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD-  265 (382)
T ss_dssp             CCTTCEETTC-----------CCCSSCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred             eccCceeccc-----------ccccccCCccccChHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence            9999875432           1235789999999999963      468999999999999999999999998764211 


Q ss_pred             CcccCccchhhHHHHHHHHhcC--CC----------------CCCCCCC-----------------CC------------
Q psy16343        359 GWQRGETCHACQEILFHSIQQG--HY----------------DFPEGEW-----------------ST------------  391 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~--~~----------------~~p~~~~-----------------~~------------  391 (539)
                                    .+..|...  .+                .+|...|                 ..            
T Consensus       266 --------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  331 (382)
T 2vx3_A          266 --------------QMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGP  331 (382)
T ss_dssp             --------------HHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSG
T ss_pred             --------------HHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCC
Confidence                          11111110  00                0111111                 00            


Q ss_pred             -------------CCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        392 -------------ISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       392 -------------~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                   .+++++|||.+||+.||++|||++|+|+||||+..
T Consensus       332 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          332 GGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             GGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             CccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                         01478999999999999999999999999999764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=4.5e-40  Score=343.56  Aligned_cols=264  Identities=23%  Similarity=0.380  Sum_probs=177.8

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcC-CCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQG-HPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~-HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+.. ++.||||++.+...  .....+.+|+++|.++.+ |||||++++++......+ 
T Consensus        56 ~~y~~-~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~-  132 (390)
T 2zmd_A           56 RIYSI-LKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY-  132 (390)
T ss_dssp             EEEEE-EEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE-
T ss_pred             CceEE-EEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE-
Confidence            34665 5789999999999998765 88999999965432  234568899999999874 799999999887654432 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .+++ + +              .+...+...                .    .
T Consensus       133 --lv-----------------------~E~~-~-~--------------~L~~~l~~~----------------~----~  151 (390)
T 2zmd_A          133 --MV-----------------------MECG-N-I--------------DLNSWLKKK----------------K----S  151 (390)
T ss_dssp             --EE-----------------------EECC-S-E--------------EHHHHHHHC----------------S----S
T ss_pred             --EE-----------------------EecC-C-C--------------CHHHHHHhc----------------C----C
Confidence              11                       1110 0 0              000000000                0    0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .+.+..-.                     +.+|   ++.++.|+|  ++||+||||||+|||+.+    +.+||+|||++
T Consensus       152 ~~~~~~~~---------------------i~~q---i~~aL~~lH--~~~ivHrDlkp~NIll~~----~~~kl~DFG~a  201 (390)
T 2zmd_A          152 IDPWERKS---------------------YWKN---MLEAVHTIH--QHGIVHSDLKPANFLIVD----GMLKLIDFGIA  201 (390)
T ss_dssp             CCHHHHHH---------------------HHHH---HHHHHHHHH--TTTCCCCCCCGGGEEESS----SCEEECCCSSS
T ss_pred             CCHHHHHH---------------------HHHH---HHHHHHHHH--HCCeeecCCCHHHEEEEC----CeEEEEecCcc
Confidence            01111111                     2334   667788888  999999999999999942    56999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCC-----CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG-----PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~-----~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      +.+......      ....+.+||+.|+|||++.....     .....|+.++|||||||++|+|++|.+||.+...   
T Consensus       202 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---  272 (390)
T 2zmd_A          202 NQMQPDTTS------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---  272 (390)
T ss_dssp             CCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC---
T ss_pred             ccccCCCcc------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH---
Confidence            865432210      11246789999999999863110     0013588999999999999999999999976421   


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                 ....+..+..+...++.+  ...+.++++||.+||..||.+|||++|+|+||||...
T Consensus       273 -----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          273 -----------QISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             -----------HHHHHHHHHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             -----------HHHHHHHHhCccccCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence                       122344455444433322  2358899999999999999999999999999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.3e-40  Score=342.99  Aligned_cols=289  Identities=20%  Similarity=0.287  Sum_probs=169.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++.+.. ....+..+|++.+..+ +||||++++++|...........
T Consensus        23 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~   99 (360)
T 3e3p_A           23 DRFQV-ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDI   99 (360)
T ss_dssp             TTEEE-C----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCE
T ss_pred             cceEE-EEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccce
Confidence            34665 578999999999999999999999999985432 2234566777777776 59999999999865322110000


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                               .+.          -+.++.-+ .               +...           +..... .....    +.
T Consensus       100 ---------~~~----------lv~e~~~~-~---------------l~~~-----------~~~~~~-~~~~~----~~  128 (360)
T 3e3p_A          100 ---------YLN----------VVMEYVPD-T---------------LHRC-----------CRNYYR-RQVAP----PP  128 (360)
T ss_dssp             ---------EEE----------EEEECCSC-B---------------HHHH-----------HHHHHT-TTCCC----CH
T ss_pred             ---------eEE----------EEeecccc-c---------------HHHH-----------HHHHhh-cccCC----CH
Confidence                     000          01111000 0               0000           000000 00000    00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ...-.                     +..+   ++.++.|+|.|++||+||||||+|||+...  .+.+||+|||+++..
T Consensus       129 ~~~~~---------------------~~~q---i~~al~~lH~~~~~ivH~Dlkp~NIll~~~--~~~~kl~Dfg~a~~~  182 (360)
T 3e3p_A          129 ILIKV---------------------FLFQ---LIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKL  182 (360)
T ss_dssp             HHHHH---------------------HHHH---HHHHHHHHTSTTTCCBCSCCCGGGEEEETT--TTEEEECCCTTCBCC
T ss_pred             HHHHH---------------------HHHH---HHHHHHHHhCCCCCeecCcCCHHHEEEeCC--CCcEEEeeCCCceec
Confidence            00001                     2233   667889999999999999999999999642  356999999999765


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ....         .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+.........
T Consensus       183 ~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~  248 (360)
T 3e3p_A          183 SPSE---------PNVAYICSRYYRAPELIFG-----NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL  248 (360)
T ss_dssp             CTTS---------CCCSTTSCGGGCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred             CCCC---------CcccccCCcceeCHHHHcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence            4322         1235689999999999853     2358999999999999999999999998754211000000000


Q ss_pred             hhhHHHHHHHHhcCCC--C---CCCC--------CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        367 HACQEILFHSIQQGHY--D---FPEG--------EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~--~---~p~~--------~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                      .......+..+.....  .   ....        .....++++++||.+||+.||.+|||+.|+|+||||......
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  324 (360)
T 3e3p_A          249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP  324 (360)
T ss_dssp             CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred             CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence            0000001111110000  0   0000        012357899999999999999999999999999999876543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=3.2e-40  Score=344.21  Aligned_cols=288  Identities=18%  Similarity=0.194  Sum_probs=178.6

Q ss_pred             cchhcccCceecee--CceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         46 QDLYRLKGEILGKG--AYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        46 ~~~y~~~~~~LG~G--~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.|++ .+.||+|  +||.||+|++..+++.||||++.+...  .....+.+|+.+++.+ +|||||+++++|.+....
T Consensus        24 ~~~y~~-~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~  101 (389)
T 3gni_B           24 GGCYEL-LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNEL  101 (389)
T ss_dssp             GGGEEE-EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             CCcEEE-EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEE
Confidence            445665 5789999  999999999999999999999965322  2235677899999987 599999999999876543


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|                       .+|--+ +              .+...           +...   .....+
T Consensus       102 ~---lv-----------------------~e~~~~-~--------------~L~~~-----------l~~~---~~~~~~  126 (389)
T 3gni_B          102 W---VV-----------------------TSFMAY-G--------------SAKDL-----------ICTH---FMDGMN  126 (389)
T ss_dssp             E---EE-----------------------EECCTT-C--------------BHHHH-----------HHHT---CTTCCC
T ss_pred             E---EE-----------------------EEccCC-C--------------CHHHH-----------Hhhh---cccCCC
Confidence            3   11                       111000 0              00000           0000   000000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                       ...++   .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       127 -~~~~~---~---------------------~~~q---i~~~l~~LH--~~~ivHrDlkp~NIll~---~~~~~kl~dfg  173 (389)
T 3gni_B          127 -ELAIA---Y---------------------ILQG---VLKALDYIH--HMGYVHRSVKASHILIS---VDGKVYLSGLR  173 (389)
T ss_dssp             -HHHHH---H---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTCCEEECCGG
T ss_pred             -HHHHH---H---------------------HHHH---HHHHHHHHH--hCCeecCCCCHHHEEEc---CCCCEEEcccc
Confidence             00000   0                     3334   667888888  99999999999999994   44579999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ++.......... ..........+||+.|+|||++.+    ....|+.++|||||||++|+|++|.+||.+.+..+....
T Consensus       174 ~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  248 (389)
T 3gni_B          174 SNLSMISHGQRQ-RVVHDFPKYSVKVLPWLSPEVLQQ----NLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE  248 (389)
T ss_dssp             GCEECEETTEEC-SCBCCCCTTCTTTGGGSCHHHHST----TSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH
T ss_pred             cceeeccccccc-cccccccccccccccccCHHHHhc----cCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence            876432211100 001112234589999999999963    124689999999999999999999999987654331110


Q ss_pred             cCccch--------hhHHHH-------------HHHHhc------CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCH
Q psy16343        362 RGETCH--------ACQEIL-------------FHSIQQ------GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA  414 (539)
Q Consensus       362 ~~~~~~--------~~~~~~-------------~~~i~~------~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta  414 (539)
                      ......        ...+.+             ...+..      .........+..+++++++||.+||+.||.+|||+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta  328 (389)
T 3gni_B          249 KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA  328 (389)
T ss_dssp             C--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             HhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence            000000        000000             000000      00000111245689999999999999999999999


Q ss_pred             HHHhcCCCccCCCC
Q psy16343        415 ASVLKHPWISTAGT  428 (539)
Q Consensus       415 ~e~l~Hpw~~~~~~  428 (539)
                      +|+|+||||.....
T Consensus       329 ~ell~hp~f~~~~~  342 (389)
T 3gni_B          329 STLLNHSFFKQIKR  342 (389)
T ss_dssp             HHHTTSGGGGGC--
T ss_pred             HHHhcCHHHHHHhh
Confidence            99999999986543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.7e-40  Score=342.90  Aligned_cols=278  Identities=23%  Similarity=0.315  Sum_probs=169.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.+...  .....+.+|+.++..+ +||||+++++++.......
T Consensus        23 ~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           23 VLKRYQN-LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EETTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTT
T ss_pred             hhhheeE-eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccc
Confidence            4456775 5789999999999999999999999999965322  2235678999999987 5999999999987653211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .          ...+.          -+.++.-+                .+...           +.       ...+ 
T Consensus       101 ~----------~~~~~----------lv~e~~~~----------------~l~~~-----------~~-------~~~~-  125 (371)
T 2xrw_A          101 E----------FQDVY----------IVMELMDA----------------NLCQV-----------IQ-------MELD-  125 (371)
T ss_dssp             T----------CCEEE----------EEEECCSE----------------EHHHH-----------HH-------SCCC-
T ss_pred             c----------ccceE----------EEEEcCCC----------------CHHHH-----------Hh-------hccC-
Confidence            0          00000          01111000                00000           00       0000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       126 ~~~~~------------------------~i~~q---i~~al~~lH--~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~  173 (371)
T 2xrw_A          126 HERMS------------------------YLLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVK---SDCTLKILDFGL  173 (371)
T ss_dssp             HHHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECCCCC
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--HCCeecccCCHHHEEEc---CCCCEEEEEeec
Confidence            00000                        03334   677888888  99999999999999994   445799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......         ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+.....
T Consensus       174 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  238 (371)
T 2xrw_A          174 ARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV  238 (371)
T ss_dssp             -------------------------CTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             cccccccc---------ccCCceecCCccCHHHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            87543211         1235689999999999963      46899999999999999999999999876421100000


Q ss_pred             CccchhhHHH-------HHHHHhcCCCCCCCCC---------C-------CCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEI-------LFHSIQQGHYDFPEGE---------W-------STISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~-------~~~~i~~~~~~~p~~~---------~-------~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+....+...       ...........+....         +       ...+++++|||++||+.||.+|||++|+|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            0000000000       0000000111111100         0       012578999999999999999999999999


Q ss_pred             CCCccCC
Q psy16343        420 HPWISTA  426 (539)
Q Consensus       420 Hpw~~~~  426 (539)
                      ||||...
T Consensus       319 hp~~~~~  325 (371)
T 2xrw_A          319 HPYINVW  325 (371)
T ss_dssp             SHHHHTT
T ss_pred             Ccchhhh
Confidence            9999753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.9e-39  Score=336.49  Aligned_cols=279  Identities=24%  Similarity=0.302  Sum_probs=179.1

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.|.+ .+.||+|+||.||+|.+..+|+.||||++.+....  ...++.+|+.++..+ +||||+++++++......
T Consensus        39 ~l~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~  116 (371)
T 4exu_A           39 ELPKTYVS-PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSL  116 (371)
T ss_dssp             EEETTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSS
T ss_pred             cccccEEE-EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCc
Confidence            45667776 57899999999999999999999999999653322  245678999999997 599999999999765432


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .   .+      .+..+           +.++.-+                .+....+..  ...+              
T Consensus       117 ~---~~------~~~~l-----------v~e~~~~----------------~l~~~~~~~--~~~~--------------  144 (371)
T 4exu_A          117 R---NF------YDFYL-----------VMPFMQT----------------DLQKIMGME--FSEE--------------  144 (371)
T ss_dssp             T---TC------CCCEE-----------EEECCCE----------------EHHHHTTSC--CCHH--------------
T ss_pred             c---cc------eeEEE-----------EEccccc----------------cHHHHhhcC--CCHH--------------
Confidence            1   00      00011           1111000                000000000  0000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                         .++   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       145 ---~~~---~---------------------i~~q---i~~aL~~LH--~~~ivH~Dikp~NIll~---~~~~~kL~Dfg  189 (371)
T 4exu_A          145 ---KIQ---Y---------------------LVYQ---MLKGLKYIH--SAGVVHRDLKPGNLAVN---EDCELKILDFG  189 (371)
T ss_dssp             ---HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEECSTT
T ss_pred             ---HHH---H---------------------HHHH---HHHHHHHHH--HCCCcCCCcCHHHeEEC---CCCCEEEEecC
Confidence               000   0                     2333   667788888  89999999999999994   44569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++.....           ....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+....
T Consensus       190 ~a~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  253 (371)
T 4exu_A          190 LARHADAE-----------MTGYVVTRWYRAPEVILS-----WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ  253 (371)
T ss_dssp             CC-------------------CTTCCCTTSCHHHHSC-----CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             cccccccC-----------cCCcccCccccCHHHhcC-----CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            98754321           235689999999999863     24688999999999999999999999987542110000


Q ss_pred             cCccchhhHH--------HHHHHHhcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        362 RGETCHACQE--------ILFHSIQQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       362 ~~~~~~~~~~--------~~~~~i~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..........        .............+..    .+..+++++++||.+||+.||++|||++|+|+||||....
T Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          254 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             HHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence            0000000000        0000000000111111    1346799999999999999999999999999999998643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.8e-40  Score=334.31  Aligned_cols=254  Identities=24%  Similarity=0.356  Sum_probs=176.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      |.+.|++ .+.||+|+||+||+|++..+++.||||++......  ...+..+|+..+..+.+||||+++++++.++...+
T Consensus        55 ~~~~y~~-~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           55 FQQSFQR-LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHHHEEE-EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhheee-eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            4566775 46899999999999999999999999998643222  23355677777777768999999999997654332


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++. + +              .+...           +...    ....+ 
T Consensus       134 ---lv-----------------------~e~~-~-~--------------~L~~~-----------~~~~----~~~l~-  155 (311)
T 3p1a_A          134 ---LQ-----------------------TELC-G-P--------------SLQQH-----------CEAW----GASLP-  155 (311)
T ss_dssp             ---EE-----------------------EECC-C-C--------------BHHHH-----------HHHH----CSCCC-
T ss_pred             ---EE-----------------------Eecc-C-C--------------CHHHH-----------HHhc----CCCCC-
Confidence               11                       1110 0 0              00000           0000    00000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...+|                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       156 ~~~~~------------------------~i~~q---i~~aL~~LH--~~~ivH~Dikp~NIll~---~~~~~kl~DFG~  203 (311)
T 3p1a_A          156 EAQVW------------------------GYLRD---TLLALAHLH--SQGLVHLDVKPANIFLG---PRGRCKLGDFGL  203 (311)
T ss_dssp             HHHHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---GGGCEEECCCTT
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--HCCEecCCCCHHHEEEC---CCCCEEEcccee
Confidence            00000                        03334   677888888  89999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +.......         .....+||+.|+|||++.+       .|+.++||||+||++|+|++|..||.+..        
T Consensus       204 a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~el~~g~~~~~~~~--------  259 (311)
T 3p1a_A          204 LVELGTAG---------AGEVQEGDPRYMAPELLQG-------SYGTAADVFSLGLTILEVACNMELPHGGE--------  259 (311)
T ss_dssp             CEECC---------------CCCCCGGGCCGGGGGT-------CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------
T ss_pred             eeecccCC---------CCcccCCCccccCHhHhcC-------CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------
Confidence            87543221         1235679999999999862       58899999999999999999987775421        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                ....+..+.  .+...+..+++++++||.+||..||++|||++|+|+||||+.
T Consensus       260 ----------~~~~~~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          260 ----------GWQQLRQGY--LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             ----------HHHHHTTTC--CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             ----------HHHHHhccC--CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                      233343332  222233568999999999999999999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=6e-40  Score=326.10  Aligned_cols=261  Identities=21%  Similarity=0.301  Sum_probs=179.7

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ..|.+.|++ .+.||+|+||.||+|.+..+++.||||++.+...  .....+.+|+..+..+.+||||+++++++.+...
T Consensus         7 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~   85 (289)
T 1x8b_A            7 SRYTTEFHE-LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH   85 (289)
T ss_dssp             CHHHHHEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE
T ss_pred             ccccchhhh-hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence            346777876 5789999999999999999999999999975322  2345678899999988679999999999876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|                       .++.-+ +              .+...+..        ...    .....
T Consensus        86 ~~---lv-----------------------~e~~~~-~--------------~L~~~l~~--------~~~----~~~~~  112 (289)
T 1x8b_A           86 ML---IQ-----------------------NEYCNG-G--------------SLADAISE--------NYR----IMSYF  112 (289)
T ss_dssp             EE---EE-----------------------EECCTT-C--------------BHHHHHHH--------HHH----HTCCC
T ss_pred             EE---EE-----------------------EEecCC-C--------------cHHHHHHh--------hcc----cccCC
Confidence            32   11                       111000 0              00000000        000    00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC----------
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------  270 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~----------  270 (539)
                      + ...+|.                        +..|   ++.++.|+|  ++||+||||||+|||+..++          
T Consensus       113 ~-~~~~~~------------------------i~~q---i~~al~~lH--~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~  162 (289)
T 1x8b_A          113 K-EAELKD------------------------LLLQ---VGRGLRYIH--SMSLVHMDIKPSNIFISRTSIPNAASEEGD  162 (289)
T ss_dssp             C-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC-------------
T ss_pred             C-HHHHHH------------------------HHHH---HHHHHHHHH--hCCEeecCCCHHHEEEcCCCCCcccccccc
Confidence            0 000110                        3334   677788888  99999999999999996543          


Q ss_pred             ------CCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHH
Q psy16343        271 ------QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL  344 (539)
Q Consensus       271 ------~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll  344 (539)
                            ....+||+|||++......            ...+||+.|+|||++..     ...|+.++|||||||++|+|+
T Consensus       163 ~~~~~~~~~~~kl~Dfg~~~~~~~~------------~~~~gt~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~  225 (289)
T 1x8b_A          163 EDDWASNKVMFKIGDLGHVTRISSP------------QVEEGDSRFLANEVLQE-----NYTHLPKADIFALALTVVCAA  225 (289)
T ss_dssp             -------CCCEEECCCTTCEETTCS------------CCCCCCGGGCCHHHHTT-----CCTTHHHHHHHHHHHHHHHHT
T ss_pred             cccccCCceEEEEcccccccccCCc------------cccCCCccccChhHhcC-----CCCCCchhhHHHHHHHHHHHh
Confidence                  3456899999998754321            13469999999999863     235668999999999999999


Q ss_pred             hCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        345 CGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       345 ~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      +|.+||....                  ....+..+.. .+|    ..+++++++||.+||..||.+|||+.|+++||||
T Consensus       226 ~~~~~~~~~~------------------~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  283 (289)
T 1x8b_A          226 GAEPLPRNGD------------------QWHEIRQGRLPRIP----QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL  283 (289)
T ss_dssp             TCCCCCSSSH------------------HHHHHHTTCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC
T ss_pred             cCCCCCcchh------------------HHHHHHcCCCCCCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhhChHh
Confidence            9998875421                  2344444443 222    4689999999999999999999999999999999


Q ss_pred             cCC
Q psy16343        424 STA  426 (539)
Q Consensus       424 ~~~  426 (539)
                      ...
T Consensus       284 ~~~  286 (289)
T 1x8b_A          284 LSA  286 (289)
T ss_dssp             ---
T ss_pred             hhh
Confidence            754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=8.4e-40  Score=342.00  Aligned_cols=285  Identities=21%  Similarity=0.290  Sum_probs=177.3

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .....|.+ .++||+|+||+||+|++..++. ||+|++.+...    ...+|+++++.+ +|||||+++++|....... 
T Consensus        37 ~~~~~Y~~-~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~-  108 (394)
T 4e7w_A           37 QREIAYTN-CKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIV-KHPNVVDLKAFFYSNGDKK-  108 (394)
T ss_dssp             EEEEEEEE-EEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTC-CCTTBCCEEEEEEEESSSS-
T ss_pred             cccceEEE-eEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhC-CCCCcceEEEEEEecCCCC-
Confidence            34556775 5789999999999999887776 88887754221    123699999987 5999999999985433210 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                .+..+         .-+.++.-+ .               +...           +..+.. .....   
T Consensus       109 ----------~~~~~---------~lv~e~~~~-~---------------l~~~-----------~~~~~~-~~~~~---  138 (394)
T 4e7w_A          109 ----------DEVFL---------NLVLEYVPE-T---------------VYRA-----------SRHYAK-LKQTM---  138 (394)
T ss_dssp             ----------SCEEE---------EEEEECCSE-E---------------HHHH-----------HHHHHH-TTSCC---
T ss_pred             ----------CceEE---------EEEeeccCc-c---------------HHHH-----------HHHHHh-hcCCC---
Confidence                      00000         001111000 0               0000           000000 00000   


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       +.-..-.                     |..|   ++.++.|+|  ++||+||||||+|||+..  ..+.+||+|||++
T Consensus       139 -~~~~~~~---------------------~~~q---i~~aL~~LH--~~~ivHrDlkp~Nill~~--~~~~~kL~DFG~a  189 (394)
T 4e7w_A          139 -PMLLIKL---------------------YMYQ---LLRSLAYIH--SIGICHRDIKPQNLLLDP--PSGVLKLIDFGSA  189 (394)
T ss_dssp             -CHHHHHH---------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEET--TTTEEEECCCTTC
T ss_pred             -CHHHHHH---------------------HHHH---HHHHHHHHH--HCCccCCCCCHHHEEEcC--CCCcEEEeeCCCc
Confidence             0000001                     2334   667888888  999999999999999952  3456999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         ...+.+||+.|+|||++.+     ...|+.++|||||||++|+|++|++||.+.+..+......
T Consensus       190 ~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~  255 (394)
T 4e7w_A          190 KILIAGE---------PNVSYICSRYYRAPELIFG-----ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII  255 (394)
T ss_dssp             EECCTTC---------CCCSSCSCGGGCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             ccccCCC---------CCcccccCcCccCHHHHcC-----CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            7543222         1235689999999999863     2458999999999999999999999998865322100000


Q ss_pred             ccchhhHHHHHHHHh--cCCCCCCCC--------CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        364 ETCHACQEILFHSIQ--QGHYDFPEG--------EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~--~~~~~~p~~--------~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                      .....+.......+.  .....+|..        .+..+++++++||.+||+.||.+|||+.|+|+||||......
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  331 (394)
T 4e7w_A          256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG  331 (394)
T ss_dssp             HHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred             HHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence            000000000000100  011222211        123489999999999999999999999999999999876543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=8.8e-40  Score=326.31  Aligned_cols=264  Identities=36%  Similarity=0.666  Sum_probs=195.2

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|.+.|++ .+.||+|+||.||+|.+..+++.||||++.+..  ......+.+|++++.++ +||||+++++++.+...
T Consensus        18 ~~~~~~y~i-~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   95 (287)
T 2wei_A           18 GTFAERYNI-VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSS   95 (287)
T ss_dssp             HHHHHHEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             HHHhhccee-eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCe
Confidence            346677776 578999999999999999999999999996432  23467788999999997 69999999999876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      .|.+.                 + +              .+...+.....+.+              
T Consensus        96 ~~---lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~--------------  120 (287)
T 2wei_A           96 FY---IV------GELYT-----------------G-G--------------ELFDEIIKRKRFSE--------------  120 (287)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHHHHHSSCCH--------------
T ss_pred             EE---EE------EEccC-----------------C-C--------------CHHHHHHhcCCCCH--------------
Confidence            22   11      11100                 0 0              00000000000000              


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                         ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+...+....+||+||
T Consensus       121 ---~~~~~------------------------i~~q---i~~~l~~LH--~~~i~H~dl~p~NIlv~~~~~~~~~kL~Df  168 (287)
T 2wei_A          121 ---HDAAR------------------------IIKQ---VFSGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDF  168 (287)
T ss_dssp             ---HHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred             ---HHHHH------------------------HHHH---HHHHHHHHH--HCCeeccCCChhhEEEecCCCcccEEEecc
Confidence               00110                        2333   667788888  999999999999999976555567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++.......         .....+||+.|+|||++.+       .|+.++|+|||||++|+|++|.+||.+.+      
T Consensus       169 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~p~~~~~------  226 (287)
T 2wei_A          169 GLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKN------  226 (287)
T ss_dssp             TGGGTBCCCS---------SCSCHHHHHTTCCHHHHTT-------CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------
T ss_pred             CcceeecCCC---------ccccccCcccccChHHhcC-------CCCCchhhHhHHHHHHHHHhCCCCCCCCC------
Confidence            9987543221         1234579999999999852       48899999999999999999999998753      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                               ...+...+..+.+.++...|..+++++++||.+||..||.+|||++|+|+||||...
T Consensus       227 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          227 ---------EYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             ---------HHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             ---------HHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence                     234567778888877777778899999999999999999999999999999999754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.3e-40  Score=337.52  Aligned_cols=255  Identities=25%  Similarity=0.350  Sum_probs=180.2

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--------CHHHHHHHHHHHHhhcCCCCeeeeee
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--------SRSRVFKEVETFHHCQGHPNIIQLLE  113 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--------~~~~~~~Ei~~l~~~~~HpnIv~l~~  113 (539)
                      .+.|.+.|++ .+.||+|+||.||+|++..+++.||||++.+....        ....+.+|++++..+ +||||+++++
T Consensus        19 ~~~~~~~y~~-~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~   96 (335)
T 3dls_A           19 EGEYSQKYST-MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLD   96 (335)
T ss_dssp             TTHHHHHEEE-EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEE
T ss_pred             CcccccceEE-EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEE
Confidence            4457778886 57899999999999999999999999999754311        233567899999987 6999999999


Q ss_pred             eecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc
Q psy16343        114 YYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM  193 (539)
Q Consensus       114 ~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~  193 (539)
                      +|.+....+   .|                       .++. ..+.             .+...+.....+..+      
T Consensus        97 ~~~~~~~~~---lv-----------------------~e~~-~~g~-------------~l~~~~~~~~~l~~~------  130 (335)
T 3dls_A           97 IFENQGFFQ---LV-----------------------MEKH-GSGL-------------DLFAFIDRHPRLDEP------  130 (335)
T ss_dssp             EEECSSEEE---EE-----------------------EECC-TTSC-------------BHHHHHHTCCCCCHH------
T ss_pred             EEeeCCEEE---EE-----------------------EEeC-CCCc-------------cHHHHHHhcCCCCHH------
Confidence            997665432   11                       1110 0000             000000000000000      


Q ss_pred             CCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCC
Q psy16343        194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLS  273 (539)
Q Consensus       194 ~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~  273 (539)
                                 .++   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+
T Consensus       131 -----------~~~---~---------------------i~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~---~~~  167 (335)
T 3dls_A          131 -----------LAS---Y---------------------IFRQ---LVSAVGYLR--LKDIIHRDIKDENIVIA---EDF  167 (335)
T ss_dssp             -----------HHH---H---------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTS
T ss_pred             -----------HHH---H---------------------HHHH---HHHHHHHHH--hCCeEEeccCHHHEEEc---CCC
Confidence                       000   0                     2333   667788888  99999999999999994   446


Q ss_pred             CceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        274 PVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  353 (539)
Q Consensus       274 ~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~  353 (539)
                      .+||+|||++.......         ...+.+||+.|+|||++.+     ...++.++|||||||++|+|++|..||.+.
T Consensus       168 ~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~  233 (335)
T 3dls_A          168 TIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLMG-----NPYRGPELEMWSLGVTLYTLVFEENPFCEL  233 (335)
T ss_dssp             CEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHTT-----CCBCSHHHHHHHHHHHHHHHHHSSCSCSSG
T ss_pred             cEEEeecccceECCCCC---------ceeccCCCccccChhhhcC-----CCCCCCcccchhHHHHHHHHHhCCCchhhH
Confidence            79999999987543221         2346789999999999863     222378899999999999999999999652


Q ss_pred             CCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                      ..                     +.......|    ..+++++++||.+||..||.+|||++|+++||||...
T Consensus       234 ~~---------------------~~~~~~~~~----~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          234 EE---------------------TVEAAIHPP----YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             GG---------------------GTTTCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HH---------------------HHhhccCCC----cccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            10                     111222222    3589999999999999999999999999999999753

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=326.38  Aligned_cols=277  Identities=22%  Similarity=0.319  Sum_probs=174.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||.||+|.+..+|+.||||++.+....  ....+.+|++++.++ +||||+++++++.+....+  
T Consensus         3 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~--   78 (311)
T 4agu_A            3 EKYEK-IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLH--   78 (311)
T ss_dssp             CCEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE--
T ss_pred             ccceE-eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEE--
Confidence            44665 47899999999999999999999999998654322  234577899999997 5999999999997654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .++.-+ +              .+........-+..+                 
T Consensus        79 -lv-----------------------~e~~~~-~--------------~l~~~~~~~~~~~~~-----------------  102 (311)
T 4agu_A           79 -LV-----------------------FEYCDH-T--------------VLHELDRYQRGVPEH-----------------  102 (311)
T ss_dssp             -EE-----------------------EECCSE-E--------------HHHHHHHTSSCCCHH-----------------
T ss_pred             -EE-----------------------EEeCCC-c--------------hHHHHHhhhcCCCHH-----------------
Confidence             11                       111000 0              000000000000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       103 ~~~---~---------------------i~~~---l~~~l~~lH--~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  150 (311)
T 4agu_A          103 LVK---S---------------------ITWQ---TLQAVNFCH--KHNCIHRDVKPENILIT---KHSVIKLCDFGFAR  150 (311)
T ss_dssp             HHH---H---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             HHH---H---------------------HHHH---HHHHHHHHH--HCCCcCCCCChhhEEEc---CCCCEEEeeCCCch
Confidence            000   0                     2233   667788888  99999999999999994   44579999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+.......
T Consensus       151 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  217 (311)
T 4agu_A          151 LLTGPSD--------YYDDEVATRWYRSPELLVG-----DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK  217 (311)
T ss_dssp             ECC--------------------GGGCCHHHHHT-----CSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             hccCccc--------ccCCCcCCccccChHHHhc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            5432211        1235689999999999863     24688999999999999999999999987642210000000


Q ss_pred             cchhhHHHHHHHHhc----CCCCCCCC--------CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQ----GHYDFPEG--------EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~----~~~~~p~~--------~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                      ...............    .....|..        .+..+++++++||.+||..||.+|||++|+|+||||.....
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             HHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             HhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence            000000000000000    01111211        13568999999999999999999999999999999987543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.2e-40  Score=338.16  Aligned_cols=265  Identities=31%  Similarity=0.449  Sum_probs=184.4

Q ss_pred             chhcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      +.|++ .+.||+|+||.||+|++.   .+++.||||++++..    ......+.+|++++.++.+||||+++++++.+..
T Consensus        54 ~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           54 ENFEL-LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGEEE-EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             cceEE-EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            45665 578999999999999985   588999999996432    1234556789999999878999999999987654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|      +|.+-                 + +              .+...+.....+..+            
T Consensus       133 ~~~---lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~------------  159 (355)
T 1vzo_A          133 KLH---LI------LDYIN-----------------G-G--------------ELFTHLSQRERFTEH------------  159 (355)
T ss_dssp             EEE---EE------ECCCC-----------------S-C--------------BHHHHHHHHSCCCHH------------
T ss_pred             eEE---EE------eecCC-----------------C-C--------------CHHHHHHHcCCCCHH------------
Confidence            332   11      11110                 0 0              000000000000000            


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                           .++   .                     +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       160 -----~~~---~---------------------~~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~~~kl~D  202 (355)
T 1vzo_A          160 -----EVQ---I---------------------YVGE---IVLALEHLH--KLGIIYRDIKLENILLD---SNGHVVLTD  202 (355)
T ss_dssp             -----HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEESC
T ss_pred             -----HHH---H---------------------HHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCcEEEee
Confidence                 000   0                     2233   667788888  99999999999999994   446799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+++.......       ......+||+.|+|||++.+    ....|+.++|||||||++|+|++|..||.......  
T Consensus       203 fG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~----~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--  269 (355)
T 1vzo_A          203 FGLSKEFVADET-------ERAYDFCGTIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--  269 (355)
T ss_dssp             SSEEEECCGGGG-------GGGCGGGSCCTTCCHHHHTT----CC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--
T ss_pred             CCCCeecccCCC-------CcccCcccCcCccChhhhcC----CCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--
Confidence            999875432211       12345789999999999863    12357889999999999999999999998654321  


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                               ....+...+......+|.    .++..+++||.+||..||.+||     +++|+++||||....+
T Consensus       270 ---------~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          270 ---------SQAEISRRILKSEPPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             ---------CHHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             ---------hHHHHHHHHhccCCCCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence                     123455566666666654    6899999999999999999999     9999999999987543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.4e-39  Score=327.43  Aligned_cols=277  Identities=24%  Similarity=0.345  Sum_probs=185.2

Q ss_pred             ccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        41 ~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ......+.|++ .+.||+|+||.||+|++..+++.||||+++..   ....+.+|++++..+.+||||+++++++.+...
T Consensus        30 ~~~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~  105 (330)
T 3nsz_A           30 VEWGNQDDYQL-VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVS  105 (330)
T ss_dssp             CCCEEGGGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTT
T ss_pred             hcccCCCceEE-EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCC
Confidence            34445677876 57899999999999999999999999999642   357789999999998789999999999876321


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..              +.          -+.++.-+ +              .+......   +..              
T Consensus       106 ~~--------------~~----------lv~e~~~~-~--------------~l~~~~~~---~~~--------------  129 (330)
T 3nsz_A          106 RT--------------PA----------LVFEHVNN-T--------------DFKQLYQT---LTD--------------  129 (330)
T ss_dssp             CC--------------EE----------EEEECCCC-C--------------CHHHHGGG---CCH--------------
T ss_pred             Cc--------------eE----------EEEeccCc-h--------------hHHHHHHh---CCH--------------
Confidence            11              00          01111000 0              00000000   000              


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                         .+++   .                     +..|   ++.++.|+|  ++||+||||||+|||+..++  ..+||+||
T Consensus       130 ---~~~~---~---------------------~~~q---i~~~l~~lH--~~~ivH~Dikp~Nil~~~~~--~~~kl~Df  175 (330)
T 3nsz_A          130 ---YDIR---F---------------------YMYE---ILKALDYCH--SMGIMHRDVKPHNVMIDHEH--RKLRLIDW  175 (330)
T ss_dssp             ---HHHH---H---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEETTT--TEEEECCC
T ss_pred             ---HHHH---H---------------------HHHH---HHHHHHHHH--hCCeeeCCCCHHHEEEcCCC--CEEEEEeC
Confidence               0010   0                     2333   667788888  99999999999999996433  25999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC-CC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~-~~  359 (539)
                      |+++......         .....+||+.|+|||++..     ...|+.++|||||||++|+|++|..||....... ..
T Consensus       176 g~a~~~~~~~---------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l  241 (330)
T 3nsz_A          176 GLAEFYHPGQ---------EYNVRVASRYFKGPELLVD-----YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL  241 (330)
T ss_dssp             TTCEECCTTC---------CCCSCCSCGGGCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHH
T ss_pred             CCceEcCCCC---------ccccccccccccChhhhcC-----CCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHH
Confidence            9987543222         1235689999999999863     2468999999999999999999999996532110 00


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCC--------------------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFP--------------------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p--------------------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .....  ......+...+......++                    ...+..+++++++||.+||..||.+|||++|+|+
T Consensus       242 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          242 VRIAK--VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHH--HHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHH--hcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00000  0001112222222222221                    1112337999999999999999999999999999


Q ss_pred             CCCccCCC
Q psy16343        420 HPWISTAG  427 (539)
Q Consensus       420 Hpw~~~~~  427 (539)
                      ||||....
T Consensus       320 hp~f~~~~  327 (330)
T 3nsz_A          320 HPYFYTVV  327 (330)
T ss_dssp             SGGGTTCC
T ss_pred             CccHhhhc
Confidence            99998653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=7.6e-40  Score=325.25  Aligned_cols=254  Identities=28%  Similarity=0.483  Sum_probs=182.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..++..||||++.+..   ......+.+|++++.++ +||||+++++++.+....+ 
T Consensus         9 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   85 (279)
T 3fdn_A            9 EDFEI-GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVY-   85 (279)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             ccEEE-eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEE-
Confidence            44665 578999999999999999999999999985421   12345678899999887 5999999999997664332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+....-+.++                
T Consensus        86 --lv------~e~~~-----------------~-~--------------~l~~~l~~~~~~~~~----------------  109 (279)
T 3fdn_A           86 --LI------LEYAP-----------------L-G--------------TVYRELQKLSKFDEQ----------------  109 (279)
T ss_dssp             --EE------ECCCT-----------------T-E--------------EHHHHHHHHSSCCHH----------------
T ss_pred             --EE------EecCC-----------------C-C--------------cHHHHHHhcCCCCHH----------------
Confidence              11      11110                 0 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       110 -~~~~------------------------~~~q---i~~~l~~LH--~~~i~H~dlkp~Nili~---~~~~~~l~Dfg~~  156 (279)
T 3fdn_A          110 -RTAT------------------------YITE---LANALSYCH--SKRVIHRDIKPENLLLG---SAGELKIADFGWS  156 (279)
T ss_dssp             -HHHH------------------------HHHH---HHHHHHHHH--TTTCEECCCCGGGEEEC---TTSCEEECSCCEE
T ss_pred             -HHHH------------------------HHHH---HHHHHHHHH--hCCEecccCChHhEEEc---CCCCEEEEecccc
Confidence             0000                        2333   667788888  99999999999999994   4457999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ......          .....+||+.|+|||++.+      ..++.++|||||||++|+|++|.+||.+.+         
T Consensus       157 ~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------  211 (279)
T 3fdn_A          157 VHAPSS----------RRTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANT---------  211 (279)
T ss_dssp             SCC------------------CCCCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSS---------
T ss_pred             ccCCcc----------cccccCCCCCccCHhHhcc------CCCCccchhHhHHHHHHHHHHCCCCCCCCc---------
Confidence            643221          1235689999999999863      467889999999999999999999997653         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                            .......+....+.+|.    .+++++++||.+||..||.+|||++|+++||||....
T Consensus       212 ------~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          212 ------YQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             ------HHHHHHHHHHTCCCCCT----TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             ------HHHHHHHHHhCCCCCCC----cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence                  23456677777777764    5899999999999999999999999999999997643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.6e-40  Score=340.10  Aligned_cols=312  Identities=22%  Similarity=0.309  Sum_probs=175.6

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|++ .+.||+|+||+||+|.+..+|+.||||++.....    ...+|+++++.+ +|||||+++++|.........
T Consensus         5 ~~~~y~~-~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            5 SSKKYSL-GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             -CTTEEE-EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTC-CCTTBCCEEEEEEEC------
T ss_pred             ccceEEE-EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHc-CCCCccchhheeeecCccccc
Confidence            3456665 5789999999999999999999999999864322    223799999887 699999999998654321100


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccC-CCCCCCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT-PVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~-~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ...   .....+.+-. ...         +....   ...        .... .-....|+.-|+...            
T Consensus        79 ~~~---~~~~~~~~~~-~~~---------~~~~~---~~~--------~~~~~~~~~~~~lv~e~~~~------------  122 (383)
T 3eb0_A           79 PPQ---PPDDHNKLGG-KNN---------GVNNH---HKS--------VIVNPSQNKYLNVIMEYVPD------------  122 (383)
T ss_dssp             -------------------------------------------------------CCEEEEEECCCSE------------
T ss_pred             ccc---cccccccccc-ccc---------ccccc---ccc--------ccccCCCceEEEEEEecCCc------------
Confidence            000   0000000000 000         00000   000        0000 000000111111000            


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                          ++.-++...+....++..  .....+..|   ++.++.|+|  ++||+||||||+|||+..  ..+.+||+|||+|
T Consensus       123 ----~L~~~l~~~~~~~~~l~~--~~~~~i~~q---i~~aL~~LH--~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a  189 (383)
T 3eb0_A          123 ----TLHKVLKSFIRSGRSIPM--NLISIYIYQ---LFRAVGFIH--SLGICHRDIKPQNLLVNS--KDNTLKLCDFGSA  189 (383)
T ss_dssp             ----EHHHHHHHHHHTTCCCCH--HHHHHHHHH---HHHHHHHHH--TTTEECSCCCGGGEEEET--TTTEEEECCCTTC
T ss_pred             ----cHHHHHHHHHhcCCCCCH--HHHHHHHHH---HHHHHHHHH--HCcCccCccCHHHEEEcC--CCCcEEEEECCCC
Confidence                000011111111111100  000113334   667788888  999999999999999953  2346999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         ...+.+||+.|+|||++.+     ...|+.++||||+||++|+|++|.+||.+.+..+......
T Consensus       190 ~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~  255 (383)
T 3eb0_A          190 KKLIPSE---------PSVAYICSRFYRAPELMLG-----ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRII  255 (383)
T ss_dssp             EECCTTS---------CCCCCCCCSSCCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             cccCCCC---------CCcCcccCCCccCHHHhcC-----CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            7543222         1235689999999999863     2458999999999999999999999998764322100000


Q ss_pred             ccchhhHHHHHHHHh--cCCCCCCC---CCC-----CCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        364 ETCHACQEILFHSIQ--QGHYDFPE---GEW-----STISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~--~~~~~~p~---~~~-----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      .....+....+....  ...+.+|.   ..|     ..+++++++||.+||..||.+|||+.|+|+||||..
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          256 QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            000000000000000  01122221   111     347899999999999999999999999999999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=8.4e-40  Score=325.24  Aligned_cols=263  Identities=36%  Similarity=0.581  Sum_probs=188.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC------CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG------HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.+...      .....+.+|+.++.++ +||||+++++++.+.
T Consensus         3 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   80 (283)
T 3bhy_A            3 VEDHYEM-GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENK   80 (283)
T ss_dssp             HHHHEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             hhhhhhh-HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCC
Confidence            3456776 5789999999999999999999999999965321      1356789999999997 599999999998765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|                       .++.-+ +              .+...+.....+..+           
T Consensus        81 ~~~~---lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~-----------  108 (283)
T 3bhy_A           81 TDVV---LI-----------------------LELVSG-G--------------ELFDFLAEKESLTED-----------  108 (283)
T ss_dssp             SEEE---EE-----------------------EECCCS-C--------------BHHHHHHHHSSCCHH-----------
T ss_pred             CeEE---EE-----------------------EeecCC-C--------------cHHHHHHhcCCCCHH-----------
Confidence            4322   11                       111000 0              000000000000000           


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC-CCCCcee
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD-QLSPVKL  277 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~-~~~~ikl  277 (539)
                            +++.                        +..+   ++.++.|+|  ++||+||||||+|||+..++ ....+||
T Consensus       109 ------~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dl~p~Nil~~~~~~~~~~~kl  153 (283)
T 3bhy_A          109 ------EATQ------------------------FLKQ---ILDGVHYLH--SKRIAHFDLKPENIMLLDKNVPNPRIKL  153 (283)
T ss_dssp             ------HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred             ------HHHH------------------------HHHH---HHHHHHHHH--hCCccCCCCChHHEEEecCCCCCCceEE
Confidence                  0110                        2333   667788888  99999999999999996543 1236999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||++.......         .....+||+.|+|||++..      ..|+.++|+|||||++|+|++|..||.+.+   
T Consensus       154 ~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~---  215 (283)
T 3bhy_A          154 IDFGIAHKIEAGN---------EFKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGET---  215 (283)
T ss_dssp             CCCTTCEECC-----------------CCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCSS---
T ss_pred             EecccceeccCCC---------cccccCCCcCccCcceecC------CCCCcchhhhhHHHHHHHHHHCCCCCCCcc---
Confidence            9999987543221         1235679999999999863      468899999999999999999999998753   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                  .......+....+.++...+..+++++++||.+||..||.+|||++|+|+||||...
T Consensus       216 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          216 ------------KQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             ------------HHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             ------------hHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence                        234566677777777665667889999999999999999999999999999999753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.6e-38  Score=325.41  Aligned_cols=278  Identities=24%  Similarity=0.330  Sum_probs=179.1

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.|.+ .+.||+|+||.||+|.+..+|+.||||++.+....  ...++.+|+.++..+ +||||+++++++......
T Consensus        21 ~l~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   98 (353)
T 3coi_A           21 ELPKTYVS-PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSL   98 (353)
T ss_dssp             EEETTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSG
T ss_pred             ccCceEEE-eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEeccccc
Confidence            35566775 57899999999999999999999999999653222  235678999999987 599999999998765432


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ..   .      ....+           +.++.-+                .+...++..  ++.+              
T Consensus        99 ~~---~------~~~~l-----------v~e~~~~----------------~l~~~~~~~--~~~~--------------  126 (353)
T 3coi_A           99 RN---F------YDFYL-----------VMPFMQT----------------DLQKIMGLK--FSEE--------------  126 (353)
T ss_dssp             GG---C------CCCEE-----------EEECCSE----------------EGGGTTTSC--CCHH--------------
T ss_pred             cc---c------eeEEE-----------EeccccC----------------CHHHHhcCC--CCHH--------------
Confidence            10   0      00011           1111000                000000000  0000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                         .++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       127 ---~~~~------------------------i~~q---i~~al~~LH--~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg  171 (353)
T 3coi_A          127 ---KIQY------------------------LVYQ---MLKGLKYIH--SAGVVHRDLKPGNLAVN---EDCELKILDFG  171 (353)
T ss_dssp             ---HHHH------------------------HHHH---HHHHHHHHH--HTTCCCSSCCGGGEEEC---TTCCEEECSTT
T ss_pred             ---HHHH------------------------HHHH---HHHHHHHHH--HCCcccCCCCHHHEeEC---CCCcEEEeecc
Confidence               0110                        2333   667788888  89999999999999994   44569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++.....           ....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+....
T Consensus       172 ~~~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  235 (353)
T 3coi_A          172 LARHADAE-----------MTGYVVTRWYRAPEVILS-----WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ  235 (353)
T ss_dssp             CTTC-------------------CCSBCCSCHHHHSC-----CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHH
T ss_pred             cccCCCCC-----------ccccccCcCcCCHHHHhC-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            98753221           235689999999999863     24688999999999999999999999987542110000


Q ss_pred             cCccc------------hhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        362 RGETC------------HACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       362 ~~~~~------------~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .....            ..........+... ...+ ...+..+++++++||.+||..||.+|||++|+|+||||....
T Consensus       236 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          236 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence            00000            00000000000000 0111 112356899999999999999999999999999999998654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.1e-40  Score=332.68  Aligned_cols=315  Identities=17%  Similarity=0.280  Sum_probs=181.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +|-+.|++ .+.||+|+||.||+|++..+|+.||||++.... ......+.+|++++.++ +|||||+++++|.+.....
T Consensus         3 ~~~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~   80 (332)
T 3qd2_B            3 RYLTDFEP-IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEK   80 (332)
T ss_dssp             HHHHHEEE-EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCH
T ss_pred             hhhhcCce-eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccch
Confidence            46677776 578999999999999999999999999996433 23456788999999997 5999999999986543210


Q ss_pred             cc---CCeeeecCCCCCeeccCCC----CCCCeEEEe-ccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccC
Q psy16343        123 RH---KRIAHRDLKPENILCVHPD----QLSPVKLCD-FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG  194 (539)
Q Consensus       123 ~~---~~IiHrDLK~enill~~~~----~~~~ikl~D-fgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~  194 (539)
                      ..   ..+...+- ..+..+....    ....+...| |......  ..         ..........|+.-|....   
T Consensus        81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~~lv~e~~~~---  145 (332)
T 3qd2_B           81 WQEEMDEIWLKDE-STDWPLSSPSPMDAPSVKIRRMDPFSTKNTV--GQ---------LQPSSPKVYLYIQMQLCRK---  145 (332)
T ss_dssp             HHHHHHC--------------------------------------------------------CCCEEEEEEECCCS---
T ss_pred             hhhhhhhhhhccc-cccccccCCCcccccccceeeccccCccccc--cc---------ccCCCCCceEEEEEEecCC---
Confidence            00   00000000 0000000000    000000000 0000000  00         0000000011222121110   


Q ss_pred             CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC-CCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCC
Q psy16343        195 PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG-EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLS  273 (539)
Q Consensus       195 ~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~  273 (539)
                                      --+..++....+...... ....+..|   ++.++.|+|  ++||+||||||+|||+.   ..+
T Consensus       146 ----------------~~L~~~~~~~~~~~~~~~~~~~~i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~  201 (332)
T 3qd2_B          146 ----------------ENLKDWMNRRCSLEDREHGVCLHIFIQ---IAEAVEFLH--SKGLMHRDLKPSNIFFT---MDD  201 (332)
T ss_dssp             ----------------SCHHHHHHTCCSGGGSCHHHHHHHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTC
T ss_pred             ----------------CCHHHHHhcccCccchhhHHHHHHHHH---HHHHHHHHH--hCCeeecCCCcccEEEe---CCC
Confidence                            001111111110000000 00113344   677788888  99999999999999995   345


Q ss_pred             CceeccCCCccccccCCCCCCC----CCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCC
Q psy16343        274 PVKLCDFDLGSGIKFNTSVHSP----LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP  349 (539)
Q Consensus       274 ~ikl~DFGla~~~~~~~~~~~~----~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~P  349 (539)
                      .+||+|||+++...........    .........+||+.|+|||++.+      ..|+.++|||||||++|+|++|..|
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~~~~  275 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG------NNYSHKVDIFSLGLILFELLYSFST  275 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC------CCCCTHHHHHHHHHHHHHHHSCCCC
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcC------CCCcchhhHHHHHHHHHHHHHcCCC
Confidence            7999999998765432210000    00012345689999999999973      4689999999999999999999877


Q ss_pred             CCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       350 F~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      +..                 .......+..+.+  |. .+...++++++||.+||..||.+|||++|+|+||||.+
T Consensus       276 ~~~-----------------~~~~~~~~~~~~~--~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          276 QME-----------------RVRIITDVRNLKF--PL-LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHH-----------------HHHHHHHHHTTCC--CH-HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             hhH-----------------HHHHHHHhhccCC--Cc-ccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            632                 1223334444332  21 12356789999999999999999999999999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-39  Score=332.80  Aligned_cols=263  Identities=25%  Similarity=0.429  Sum_probs=173.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCC-CCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGH-PNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~H-pnIv~l~~~~~~~~~~~  122 (539)
                      .+.|++ .+.||+|+||.||+|.+ .+++.||||++......  ....+.+|+++|..+.+| |||+++++++.++...+
T Consensus         8 ~~~y~i-~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            8 GRIYSI-LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SCEEEE-EEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEE-EEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            445665 57899999999999987 56889999999653322  235678899999998643 99999999987765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|                 +  ..+              .+...+.....+                  
T Consensus        86 ---lv------~e-----------------~--~~~--------------~L~~~l~~~~~~------------------  105 (343)
T 3dbq_A           86 ---MV------ME-----------------C--GNI--------------DLNSWLKKKKSI------------------  105 (343)
T ss_dssp             ---EE------EC-----------------C--CSE--------------EHHHHHHHSCCC------------------
T ss_pred             ---EE------Ee-----------------C--CCC--------------CHHHHHHhcCCC------------------
Confidence               11      11                 0  000              000000000000                  


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        +.+..-.                     +..+   ++.++.|+|  ++||+||||||+|||+.+    +.+||+|||+
T Consensus       106 --~~~~~~~---------------------i~~q---i~~al~~lH--~~~iiHrDikp~NIll~~----~~~kl~DFG~  153 (343)
T 3dbq_A          106 --DPWERKS---------------------YWKN---MLEAVHTIH--QHGIVHSDLKPANFLIVD----GMLKLIDFGI  153 (343)
T ss_dssp             --CHHHHHH---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEET----TEEEECCCSS
T ss_pred             --CHHHHHH---------------------HHHH---HHHHHHHHH--hCCeecCCCCcceEEEEC----CcEEEeeccc
Confidence              0111111                     3334   667788888  999999999999999952    4599999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCC-----CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-----EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~-----~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      ++........      ....+.+||+.|+|||++......     ....|+.++|||||||++|+|++|.+||.+...  
T Consensus       154 a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--  225 (343)
T 3dbq_A          154 ANQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--  225 (343)
T ss_dssp             SCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS--
T ss_pred             ccccCccccc------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh--
Confidence            9765332210      112356899999999998631100     014588899999999999999999999975421  


Q ss_pred             CCcccCccchhhHHHHHHHHhcCC--CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGH--YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                  .......+....  ..+|    ...+.++++||.+||..||.+|||++|+|+||||...
T Consensus       226 ------------~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          226 ------------QISKLHAIIDPNHEIEFP----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             ------------HHHHHHHHHCTTSCCCCC----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             ------------HHHHHHHHhcCCcccCCc----ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence                        112233333322  3333    2467899999999999999999999999999999754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=7.9e-39  Score=316.81  Aligned_cols=263  Identities=25%  Similarity=0.403  Sum_probs=183.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      |-+.|++ .+.||+|+||.||+|.+..+++.||||+++... ......+.+|+.++..+ +||||+++++++.++...+ 
T Consensus         5 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   81 (276)
T 2yex_A            5 FVEDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY-   81 (276)
T ss_dssp             HHHHEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE-
T ss_pred             eecceEE-EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEE-
Confidence            5566776 578999999999999999999999999996432 23346788999999987 6999999999987654332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++.-+ +              .+...+.....+..                 
T Consensus        82 --lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~-----------------  104 (276)
T 2yex_A           82 --LF-----------------------LEYCSG-G--------------ELFDRIEPDIGMPE-----------------  104 (276)
T ss_dssp             --EE-----------------------EECCTT-E--------------EGGGGSBTTTBCCH-----------------
T ss_pred             --EE-----------------------EEecCC-C--------------cHHHHHhhccCCCH-----------------
Confidence              11                       111000 0              00000000000000                 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       105 ~~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~  152 (276)
T 2yex_A          105 PDAQR------------------------FFHQ---LMAGVVYLH--GIGITHRDIKPENLLLD---ERDNLKISDFGLA  152 (276)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--hCCeeccCCChHHEEEc---cCCCEEEeeCCCc
Confidence            00111                        2233   667778888  99999999999999995   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .........      ......+||+.|+|||++..     ...++.++|+|||||++|+|++|..||.+.....      
T Consensus       153 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------  215 (276)
T 2yex_A          153 TVFRYNNRE------RLLNKMCGTLPYVAPELLKR-----REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------  215 (276)
T ss_dssp             EECEETTEE------CCBCCCCSCGGGCCGGGGTC-----SSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS------
T ss_pred             cccCCCcch------hcccCCccccCccChHHHhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH------
Confidence            754322210      12345689999999999863     1224678999999999999999999998754321      


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                              ..+..+......++  .|..+++++++||.+||..||.+|||++|+++||||...
T Consensus       216 --------~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          216 --------QEYSDWKEKKTYLN--PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             --------HHHHHHHTTCTTST--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             --------HHHHHhhhcccccC--chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence                    12233333332222  356789999999999999999999999999999999754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.7e-39  Score=322.07  Aligned_cols=254  Identities=27%  Similarity=0.448  Sum_probs=184.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..++..||||++.+..   ......+.+|++++..+ +||||+++++++.+....+ 
T Consensus        14 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   90 (284)
T 2vgo_A           14 DDFDI-GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIY-   90 (284)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             hhcee-eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEE-
Confidence            45665 578999999999999999999999999985421   22346788999999987 5999999999987654332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+.....+.++                
T Consensus        91 --lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~----------------  114 (284)
T 2vgo_A           91 --LM------LEFAP-----------------R-G--------------ELYKELQKHGRFDEQ----------------  114 (284)
T ss_dssp             --EE------ECCCT-----------------T-E--------------EHHHHHHHHSSCCHH----------------
T ss_pred             --EE------EEeCC-----------------C-C--------------cHHHHHHhcCCCCHH----------------
Confidence              11      11100                 0 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       115 -~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~  161 (284)
T 2vgo_A          115 -RSAT------------------------FMEE---LADALHYCH--ERKVIHRDIKPENLLMG---YKGELKIADFGWS  161 (284)
T ss_dssp             -HHHH------------------------HHHH---HHHHHHHHH--TTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             -HHHH------------------------HHHH---HHHHHHHHH--HCCceecCCCHHHEEEc---CCCCEEEeccccc
Confidence             0000                        2333   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ......          ...+.+||+.|+|||++.+      ..|+.++|+|||||++|+|++|.+||.+.+         
T Consensus       162 ~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------  216 (284)
T 2vgo_A          162 VHAPSL----------RRRTMCGTLDYLPPEMIEG------KTHDEKVDLWCAGVLCYEFLVGMPPFDSPS---------  216 (284)
T ss_dssp             EECSSS----------CBCCCCSCGGGCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSS---------
T ss_pred             ccCccc----------ccccccCCCCcCCHHHhcc------CCCCcccchhhHHHHHHHHHHCCCCCCCCC---------
Confidence            643221          1235689999999999863      468899999999999999999999997643         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                            .......+....+.+|.    .+++++++||.+||..||.+|||++|+++||||....
T Consensus       217 ------~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          217 ------HTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             ------HHHHHHHHHTTCCCCCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             ------HhHHHHHHhccccCCCC----cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence                  23355667777777764    5899999999999999999999999999999998643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.9e-39  Score=331.37  Aligned_cols=257  Identities=23%  Similarity=0.348  Sum_probs=179.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.|.. .+.||+|+||.||+|.+..+++.||||++......   ....+.+|++++.++ +|||||++++++.+....+
T Consensus        53 ~~~y~~-~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  130 (348)
T 1u5q_A           53 EKLFSD-LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW  130 (348)
T ss_dssp             HHHEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             hhheee-eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEE
Confidence            344554 46799999999999999999999999999653222   234678999999997 5999999999987654322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++--+..                ...           +...    ....+ 
T Consensus       131 ---lv-----------------------~e~~~g~l----------------~~~-----------l~~~----~~~l~-  152 (348)
T 1u5q_A          131 ---LV-----------------------MEYCLGSA----------------SDL-----------LEVH----KKPLQ-  152 (348)
T ss_dssp             ---EE-----------------------EECCSEEH----------------HHH-----------HHHH----TSCCC-
T ss_pred             ---EE-----------------------EecCCCCH----------------HHH-----------HHHh----cCCCC-
Confidence               11                       11100100                000           0000    00000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       153 ~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~~---~~~~kL~DfG~  200 (348)
T 1u5q_A          153 EVEIAA------------------------VTHG---ALQGLAYLH--SHNMIHRDVKAGNILLSE---PGLVKLGDFGS  200 (348)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTCBCCCCSGGGEEEET---TTEEEECCCTT
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--hCCeeeCCCCHHHEEECC---CCCEEEeeccC
Confidence            000110                        2333   667788888  899999999999999953   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++....            ....+||+.|+|||++...   ....|+.++|||||||++|+|++|.+||.+.+.       
T Consensus       201 a~~~~~------------~~~~~gt~~y~aPE~~~~~---~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-------  258 (348)
T 1u5q_A          201 ASIMAP------------ANSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------  258 (348)
T ss_dssp             CBSSSS------------BCCCCSCGGGCCHHHHHTT---SSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------
T ss_pred             ceecCC------------CCcccCCcceeCHhhhccc---cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-------
Confidence            875421            1256899999999998531   124688999999999999999999999976531       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                             ...+..........+..   ..+++++++||.+||..||++|||++++++||||...
T Consensus       259 -------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          259 -------MSALYHIAQNESPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             -------HHHHHHHHHSCCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             -------HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence                   12233223333322222   3579999999999999999999999999999999754

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4e-40  Score=343.17  Aligned_cols=276  Identities=22%  Similarity=0.356  Sum_probs=176.9

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc-------CCCCeeeeeeee
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-------GHPNIIQLLEYY  115 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~-------~HpnIv~l~~~~  115 (539)
                      ..|.+.|++ .+.||+|+||.||+|++..+++.||||++.+. ......+.+|++++..+.       +||||++++++|
T Consensus        33 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~  110 (397)
T 1wak_A           33 DLFNGRYHV-IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF  110 (397)
T ss_dssp             CEETTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred             hhcCCeEEE-EEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence            346677876 57899999999999999999999999999642 223456788999998875       288999999988


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      .......            ..+.+          +.++. + +              .+...+          ...    
T Consensus       111 ~~~~~~~------------~~~~l----------v~e~~-~-~--------------~l~~~~----------~~~----  138 (397)
T 1wak_A          111 KISGVNG------------THICM----------VFEVL-G-H--------------HLLKWI----------IKS----  138 (397)
T ss_dssp             EEEETTE------------EEEEE----------EECCC-C-C--------------BHHHHH----------HHT----
T ss_pred             eecCCCC------------ceEEE----------EEecc-C-c--------------cHHHHH----------Hhc----
Confidence            6321100            00000          01110 0 0              000000          000    


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCC----
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPD----  270 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~----  270 (539)
                      .....    +   ...+.                  .+..|   ++.++.|+|  ++ ||+||||||+|||+..++    
T Consensus       139 ~~~~~----~---~~~~~------------------~i~~q---i~~aL~~lH--~~~givHrDikp~NIll~~~~~~~~  188 (397)
T 1wak_A          139 NYQGL----P---LPCVK------------------KIIQQ---VLQGLDYLH--TKCRIIHTDIKPENILLSVNEQYIR  188 (397)
T ss_dssp             TTSCC----C---HHHHH------------------HHHHH---HHHHHHHHH--HTTCEECCCCSGGGEEECCCHHHHH
T ss_pred             ccCCC----C---HHHHH------------------HHHHH---HHHHHHHHH--HhCCEecCCCCHHHeeEeccchhhh
Confidence            00000    0   00000                  03334   677888888  88 999999999999996432    


Q ss_pred             ------------------------------------------CCCCceeccCCCccccccCCCCCCCCCCCCccccccCc
Q psy16343        271 ------------------------------------------QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA  308 (539)
Q Consensus       271 ------------------------------------------~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~  308 (539)
                                                                ....+||+|||++......           ....+||+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~gt~  257 (397)
T 1wak_A          189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQTR  257 (397)
T ss_dssp             HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCSCG
T ss_pred             hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCCCC
Confidence                                                      1126999999998754321           23568999


Q ss_pred             ccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHH--------HhcC
Q psy16343        309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHS--------IQQG  380 (539)
Q Consensus       309 ~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~--------i~~~  380 (539)
                      .|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+.....     .....+...        +..+
T Consensus       258 ~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~  326 (397)
T 1wak_A          258 QYRSLEVLIG------SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDE-----DHIALIIELLGKVPRKLIVAG  326 (397)
T ss_dssp             GGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHH-----HHHHHHHHHHCSCCHHHHHHC
T ss_pred             cccCChhhcC------CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchH-----HHHHHHHHhcCCCChHHhhcc
Confidence            9999999973      46899999999999999999999999876543211000     000001100        0011


Q ss_pred             CCC---CC-CCC----------------------CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        381 HYD---FP-EGE----------------------WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       381 ~~~---~p-~~~----------------------~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      .+.   +. ...                      ....++++++||.+||+.||.+|||++|+|+||||+
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          327 KYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             TTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             cccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence            110   00 000                      012356789999999999999999999999999996

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.8e-39  Score=323.84  Aligned_cols=264  Identities=21%  Similarity=0.282  Sum_probs=168.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++..... ....+...|...+.+..+||||+++++++.++...+   
T Consensus         7 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~---   82 (290)
T 3fme_A            7 DDLEP-IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW---   82 (290)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE---
T ss_pred             Hhhhh-HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE---
Confidence            45555 4789999999999999999999999999965322 122344455555455567999999999997654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .++.-+....            .+.........++.+                 .
T Consensus        83 lv-----------------------~e~~~~~l~~------------~l~~~~~~~~~~~~~-----------------~  110 (290)
T 3fme_A           83 IC-----------------------MELMDTSLDK------------FYKQVIDKGQTIPED-----------------I  110 (290)
T ss_dssp             EE-----------------------EECCSEEHHH------------HHHHHHHTTCCCCHH-----------------H
T ss_pred             EE-----------------------EehhccchHH------------HHHHHHhcCCCCCHH-----------------H
Confidence            11                       1110000000            000000000000000                 0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      ++                        .+..+   ++.++.|+|  ++ ||+||||||+|||+.   ..+.+||+|||++.
T Consensus       111 ~~------------------------~i~~q---i~~~l~~lH--~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~  158 (290)
T 3fme_A          111 LG------------------------KIAVS---IVKALEHLH--SKLSVIHRDVKPSNVLIN---ALGQVKMCDFGISG  158 (290)
T ss_dssp             HH------------------------HHHHH---HHHHHHHHH--HHSCCCCCCCSGGGCEEC---TTCCEEBCCC----
T ss_pred             HH------------------------HHHHH---HHHHHHHHh--hcCCeecCCCCHHHEEEC---CCCCEEEeecCCcc
Confidence            00                        03334   667788888  88 999999999999994   44579999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......         .....+||+.|+|||++....  ....|+.++|||||||++|+|++|..||.+...         
T Consensus       159 ~~~~~~---------~~~~~~~t~~y~aPE~~~~~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------  218 (290)
T 3fme_A          159 YLVDDV---------AKDIDAGCKPYMAPERINPEL--NQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---------  218 (290)
T ss_dssp             --------------------CCCCCCSCHHHHSCCT--TC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---------
T ss_pred             cccccc---------cccccCCCccccChhhcChhh--cCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---------
Confidence            543221         122457999999999974211  134688999999999999999999999975321         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                          ....+...+......++.   ..+++++++||.+||..||.+|||++|+++||||+.
T Consensus       219 ----~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          219 ----PFQQLKQVVEEPSPQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             ----HHHHHHHHHHSCCCCCCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ----hHHHHHHHhccCCCCccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence                123344444444444443   468999999999999999999999999999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.7e-38  Score=326.12  Aligned_cols=290  Identities=22%  Similarity=0.340  Sum_probs=181.2

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+|+.||||++..... ....++.+|++++.++ +||||+++++++......
T Consensus         7 ~~i~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   84 (353)
T 2b9h_A            7 YNISSDFQL-KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFE   84 (353)
T ss_dssp             CCSCTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCST
T ss_pred             cccccceEE-eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccC
Confidence            345677776 5789999999999999999999999999964322 2234677999999997 599999999987653211


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ..           ..+.+          +.++.-+                .+...+.. ..+..+              
T Consensus        85 ~~-----------~~~~l----------v~e~~~~----------------~L~~~~~~-~~~~~~--------------  112 (353)
T 2b9h_A           85 NF-----------NEVYI----------IQELMQT----------------DLHRVIST-QMLSDD--------------  112 (353)
T ss_dssp             TC-----------CCEEE----------EECCCSE----------------EHHHHHHH-CCCCHH--------------
T ss_pred             cc-----------ceEEE----------EEeccCc----------------cHHHHHhh-cCCCHH--------------
Confidence            10           00000          1111000                00000000 000000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                         .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       113 ---~~~------------------------~~~~q---i~~~L~~LH--~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg  157 (353)
T 2b9h_A          113 ---HIQ------------------------YFIYQ---TLRAVKVLH--GSNVIHRDLKPSNLLIN---SNCDLKVCDFG  157 (353)
T ss_dssp             ---HHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCCGGGEEEC---TTCCEEECCCT
T ss_pred             ---HHH------------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHeEEc---CCCcEEEEecc
Confidence               000                        02333   667788888  99999999999999994   44569999999


Q ss_pred             CccccccCCCCCC--CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        282 LGSGIKFNTSVHS--PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       282 la~~~~~~~~~~~--~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      +++..........  ..........+||+.|+|||++..     ...|+.++|||||||++|+|++|.+||.+.+..+..
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  232 (353)
T 2b9h_A          158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL  232 (353)
T ss_dssp             TCEECC----------------CCCCCCGGGCCHHHHHS-----CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             cccccccccccccCccccccchhhccccccccCCeeecc-----CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence            9875532211000  000112345689999999999863     246889999999999999999999999875421100


Q ss_pred             c-----------ccCccchhhHHHHHHHHhcCCCCCCC----CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        360 W-----------QRGETCHACQEILFHSIQQGHYDFPE----GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       360 ~-----------~~~~~~~~~~~~~~~~i~~~~~~~p~----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                      .           .....+.. .......+. ....++.    ..+..+++++++||.+||..||++|||++|+|+||||.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  310 (353)
T 2b9h_A          233 LLIFGIIGTPHSDNDLRCIE-SPRAREYIK-SLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ  310 (353)
T ss_dssp             HHHHHHHCCCCSTTTTTTCC-CHHHHHHHH-TSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHHHhCCCchhccccccc-cchhhHHhh-cccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence            0           00000000 000000111 1111111    12357899999999999999999999999999999998


Q ss_pred             CCCC
Q psy16343        425 TAGT  428 (539)
Q Consensus       425 ~~~~  428 (539)
                      ....
T Consensus       311 ~~~~  314 (353)
T 2b9h_A          311 TYHD  314 (353)
T ss_dssp             TTCC
T ss_pred             ccCC
Confidence            7654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=5.8e-39  Score=328.03  Aligned_cols=261  Identities=24%  Similarity=0.400  Sum_probs=188.9

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      .....+.|.+ .+.||+|+||.||+|.+..+++.||+|++.+...   .....+.+|+.++..+ +||||+++++++.+.
T Consensus        36 ~~~~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  113 (335)
T 2owb_A           36 DPRSRRRYVR-GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDN  113 (335)
T ss_dssp             ETTTTEEEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred             CcccCCceEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecC
Confidence            3345566775 6789999999999999999999999999965321   2345678899999987 699999999999765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|      +|.+-                 + +              .+...           +..     ..
T Consensus       114 ~~~~---lv------~e~~~-----------------~-~--------------~L~~~-----------~~~-----~~  136 (335)
T 2owb_A          114 DFVF---VV------LELCR-----------------R-R--------------SLLEL-----------HKR-----RK  136 (335)
T ss_dssp             SEEE---EE------ECCCT-----------------T-C--------------BHHHH-----------HHH-----HC
T ss_pred             CeEE---EE------EecCC-----------------C-C--------------CHHHH-----------Hhc-----cC
Confidence            4332   11      11100                 0 0              00000           000     00


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      ..+ ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       137 ~l~-~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~dlkp~NIl~~---~~~~~kl~  183 (335)
T 2owb_A          137 ALT-EPEARY------------------------YLRQ---IVLGCQYLH--RNRVIHRDLKLGNLFLN---EDLEVKIG  183 (335)
T ss_dssp             SCC-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEEC---TTCCEEEC
T ss_pred             CCC-HHHHHH------------------------HHHH---HHHHHHHHH--HCCCEecCCCchhEEEc---CCCCEEEe
Confidence            000 000000                        2333   667778888  99999999999999995   44569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||++........        .....+||+.|+|||++..      ..|+.++|||||||++|+|++|..||.+.+    
T Consensus       184 Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~----  245 (335)
T 2owb_A          184 DFGLATKVEYDGE--------RKKVLCGTPNYIAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC----  245 (335)
T ss_dssp             CCTTCEECCSTTC--------CBCCCCSCCSSCCHHHHHT------SCBCTHHHHHHHHHHHHHHHHSSCTTCCSS----
T ss_pred             eccCceecccCcc--------cccccCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHHHCcCCCCCCC----
Confidence            9999875532221        1235689999999999863      468889999999999999999999997643    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                                 ....+..+..+.+.+|.    .+++++++||.+||..||.+|||++|+|+||||....
T Consensus       246 -----------~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          246 -----------LKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             -----------HHHHHHHHHHTCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             -----------HHHHHHHHhcCCCCCCc----cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence                       23355667777777764    5799999999999999999999999999999998643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6.3e-39  Score=322.40  Aligned_cols=266  Identities=26%  Similarity=0.465  Sum_probs=185.4

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.+..    ......+.+|++++..+ +||||+++++++.+...
T Consensus         3 l~~~y~i-~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   80 (305)
T 2wtk_C            3 LIGKYLM-GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEK   80 (305)
T ss_dssp             --CCBCC-CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC--
T ss_pred             cccceeE-eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCC
Confidence            3456776 688999999999999999999999999996421    22346788999999987 59999999998843221


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..              +.          -+.++.-+ +..                          +.+....   ....
T Consensus        81 ~~--------------~~----------lv~e~~~~-~l~--------------------------~~~~~~~---~~~~  106 (305)
T 2wtk_C           81 QK--------------MY----------MVMEYCVC-GMQ--------------------------EMLDSVP---EKRF  106 (305)
T ss_dssp             -C--------------EE----------EEEECCSE-EHH--------------------------HHHHHST---TCSC
T ss_pred             Ce--------------EE----------EEehhccC-CHH--------------------------HHHHhCc---cccc
Confidence            10              00          01111000 000                          0000000   0000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       107 ~-~~~~~~------------------------~~~q---i~~al~~LH--~~~i~H~dlkp~NIl~~---~~~~~kl~df  153 (305)
T 2wtk_C          107 P-VCQAHG------------------------YFCQ---LIDGLEYLH--SQGIVHKDIKPGNLLLT---TGGTLKISAL  153 (305)
T ss_dssp             C-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEECCC
T ss_pred             C-HHHHHH------------------------HHHH---HHHHHHHHH--HCCeeecCCCcccEEEc---CCCcEEeecc
Confidence            0 000110                        2333   667788888  99999999999999995   3456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++........      .....+..||+.|+|||++.+.    ...++.++|||||||++|+|++|..||.+.+      
T Consensus       154 g~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------  217 (305)
T 2wtk_C          154 GVAEALHPFAA------DDTCRTSQGSPAFQPPEIANGL----DTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------  217 (305)
T ss_dssp             TTCEECCTTCS------SCEECCCCSCGGGCCHHHHTCC----SCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------
T ss_pred             ccccccCcccc------ccccccCCCCCCCcChhhccCc----ccCCcchhhHHHHHHHHHHHHhCCCCCCCch------
Confidence            99875432111      1123456899999999998631    1234678999999999999999999998653      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                               ...+...+..+.+.+|.    .+++++.+||.+||..||.+|||++|+++||||.....
T Consensus       218 ---------~~~~~~~i~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          218 ---------IYKLFENIGKGSYAIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             ---------HHHHHHHHHHCCCCCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             ---------HHHHHHHHhcCCCCCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence                     23466777778777764    57999999999999999999999999999999986543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.9e-40  Score=331.19  Aligned_cols=269  Identities=24%  Similarity=0.358  Sum_probs=179.1

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---HHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+++.||||++.......   ...+.+|++++..+ +||||+++++++....
T Consensus         8 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A            8 SHLSDRYEL-GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAET   85 (311)
T ss_dssp             SEETTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEE
T ss_pred             ceecCcEEE-EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccC
Confidence            457778886 578999999999999999999999999997543222   34677899988886 6999999999987654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .....           ..+           +.++.-+ +              .+...+.....+.++            
T Consensus        86 ~~~~~-----------~~l-----------v~e~~~g-~--------------~L~~~l~~~~~~~~~------------  116 (311)
T 3ork_A           86 PAGPL-----------PYI-----------VMEYVDG-V--------------TLRDIVHTEGPMTPK------------  116 (311)
T ss_dssp             TTEEE-----------EEE-----------EEECCCE-E--------------EHHHHHHHHCSCCHH------------
T ss_pred             CCCcc-----------cEE-----------EEecCCC-C--------------CHHHHHHhcCCCCHH------------
Confidence            32100           001           1111000 0              000000000000000            


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                           .+|                        .+..|   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|
T Consensus       117 -----~~~------------------------~~~~q---i~~~l~~lH--~~~ivH~dlkp~Nil~~~---~~~~kl~D  159 (311)
T 3ork_A          117 -----RAI------------------------EVIAD---ACQALNFSH--QNGIIHRDVKPANIMISA---TNAVKVMD  159 (311)
T ss_dssp             -----HHH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEET---TSCEEECC
T ss_pred             -----HHH------------------------HHHHH---HHHHHHHHH--HCCCCcCCCCHHHEEEcC---CCCEEEee
Confidence                 011                        03334   667788888  999999999999999954   45699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||++..+......     .......+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+.    
T Consensus       160 fg~a~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----  224 (311)
T 3ork_A          160 FGIARAIADSGNS-----VTQTAAVIGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSP----  224 (311)
T ss_dssp             CSCC-----------------------CCTTCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH----
T ss_pred             ccCcccccccccc-----cccccccCcCcccCCHHHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----
Confidence            9998754332110     012235689999999999973      4689999999999999999999999987531    


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                 ......+.......+...+..+++++++||.+||..||.+||++.++++|+|+..
T Consensus       225 -----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          225 -----------VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             -----------HHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             -----------HHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence                       2233333344443333345678999999999999999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.9e-39  Score=319.99  Aligned_cols=259  Identities=24%  Similarity=0.413  Sum_probs=187.1

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ...+.|.+ .+.||+|+||.||+|.+..+++.||+|++.+...   .....+.+|+.++..+ +||||+++++++.+...
T Consensus        12 ~~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~   89 (294)
T 2rku_A           12 RSRRRYVR-GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDF   89 (294)
T ss_dssp             TTTEEEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             CcccceEE-EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCE
Confidence            44556765 6789999999999999999999999999865322   2345678899999987 69999999999876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+    +                      +.++.-+ +              .+.........+..+             
T Consensus        90 ~~----l----------------------v~e~~~~-~--------------~L~~~~~~~~~~~~~-------------  115 (294)
T 2rku_A           90 VF----V----------------------VLELCRR-R--------------SLLELHKRRKALTEP-------------  115 (294)
T ss_dssp             EE----E----------------------EEECCTT-C--------------BHHHHHHHHCSCCHH-------------
T ss_pred             EE----E----------------------EEecCCC-C--------------CHHHHHHhcCCCCHH-------------
Confidence            22    1                      1111000 0              000000000000000             


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                          .++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       116 ----~~~~------------------------i~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~kl~df  159 (294)
T 2rku_A          116 ----EARY------------------------YLRQ---IVLGCQYLH--RNRVIHRDLKLGNLFLN---EDLEVKIGDF  159 (294)
T ss_dssp             ----HHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCC
T ss_pred             ----HHHH------------------------HHHH---HHHHHHHHH--HCCccccCCChHhEEEc---CCCCEEEEec
Confidence                0000                        2333   667778888  99999999999999994   4456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++........        .....+||+.|+|||++..      ..++.++|+|||||++|+|++|..||.+.+      
T Consensus       160 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------  219 (294)
T 2rku_A          160 GLATKVEYDGE--------RKKVLCGTPNYIAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC------  219 (294)
T ss_dssp             TTCEECCSTTC--------CBCCCCSCCSSCCHHHHTT------SCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------
T ss_pred             cCceecccCcc--------ccccccCCCCcCCcchhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC------
Confidence            99875432221        1235689999999999863      457889999999999999999999997653      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                               .......+..+.+.+|.    .+++++++||.+||..||++|||++|+++||||....
T Consensus       220 ---------~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          220 ---------LKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             ---------HHHHHHHHHTTCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             ---------HHHHHHHHhhccCCCcc----ccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence                     23345667777776664    5799999999999999999999999999999998653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.6e-39  Score=319.22  Aligned_cols=256  Identities=32%  Similarity=0.538  Sum_probs=159.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++.+..   ......+.+|++++..+ +||||+++++++.+....+ 
T Consensus        11 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   87 (278)
T 3cok_A           11 EDFKV-GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVY-   87 (278)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEE-
T ss_pred             cccee-eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEE-
Confidence            34665 578999999999999999999999999996421   22346788999999887 5999999999987654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++--+ +              .+...+..               .....+ .
T Consensus        88 --lv-----------------------~e~~~~-~--------------~L~~~l~~---------------~~~~~~-~  111 (278)
T 3cok_A           88 --LV-----------------------LEMCHN-G--------------EMNRYLKN---------------RVKPFS-E  111 (278)
T ss_dssp             --EE-----------------------EECCTT-E--------------EHHHHHHT---------------CSSCCC-H
T ss_pred             --EE-----------------------EecCCC-C--------------cHHHHHhh---------------ccCCCC-H
Confidence              11                       111000 0              00000000               000000 0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       112 ~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~  159 (278)
T 3cok_A          112 NEARH------------------------FMHQ---IITGMLYLH--SHGILHRDLTLSNLLLT---RNMNIKIADFGLA  159 (278)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHH--HTTEECSSCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--HCCeecCCCCHHHEEEc---CCCCEEEEeecce
Confidence            01110                        2333   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........        ...+.+||+.|+|||++..      ..|+.++|+|||||++|+|++|.+||.+....+      
T Consensus       160 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------  219 (278)
T 3cok_A          160 TQLKMPHE--------KHYTLCGTPNYISPEIATR------SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN------  219 (278)
T ss_dssp             EECC------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------
T ss_pred             eeccCCCC--------cceeccCCCCcCCcchhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH------
Confidence            75432211        1235689999999999863      457889999999999999999999998754321      


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                               ....+....+.+|    ..++.++++||.+||..||++|||++++++||||...
T Consensus       220 ---------~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          220 ---------TLNKVVLADYEMP----SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             -------------CCSSCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             ---------HHHHHhhcccCCc----cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence                     2233333444444    3589999999999999999999999999999999754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.5e-39  Score=337.12  Aligned_cols=155  Identities=21%  Similarity=0.319  Sum_probs=117.3

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.....           .....||+.|+|||++.. 
T Consensus       203 i~~aL~~LH--~~~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~-  265 (371)
T 3q60_A          203 LIRLAANLQ--SKGLVHGHFTPDNLFIM---PDGRLMLGDVSALWKVGTR-----------GPASSVPVTYAPREFLNA-  265 (371)
T ss_dssp             HHHHHHHHH--HTTEEETTCSGGGEEEC---TTSCEEECCGGGEEETTCE-----------EEGGGSCGGGCCHHHHTC-
T ss_pred             HHHHHHHHH--HCCCccCcCCHHHEEEC---CCCCEEEEecceeeecCCC-----------ccCccCCcCCcChhhccC-
Confidence            777888888  99999999999999994   4467999999998754211           114567799999999952 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC-cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG-WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKD  398 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~d  398 (539)
                         ....|+.++|||||||++|+|++|.+||.+....... +...           ..+......+....+..+++++++
T Consensus       266 ---~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  331 (371)
T 3q60_A          266 ---STATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRP-----------SLRVPGTDSLAFGSCTPLPDFVKT  331 (371)
T ss_dssp             ---SEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBC-----------CTTSCCCCSCCCTTSSCCCHHHHH
T ss_pred             ---CCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhh-----------hhhhccccccchhhccCCCHHHHH
Confidence               1146899999999999999999999999876432110 1000           001111222233335689999999


Q ss_pred             HHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        399 LIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       399 li~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ||.+||..||++|||++|+|+||||..
T Consensus       332 li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          332 LIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             HHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            999999999999999999999999974

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.3e-39  Score=323.12  Aligned_cols=282  Identities=20%  Similarity=0.236  Sum_probs=178.2

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+++.||||++..........+.+|++++..+ +||||+++++++.......
T Consensus         7 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   84 (320)
T 2i6l_A            7 FDLGSRYMD-LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQL   84 (320)
T ss_dssp             EEETTTEEE-EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBC
T ss_pred             CccCCceeE-EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccc
Confidence            346667776 57899999999999999999999999998754433456788999999997 5999999999986543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .. .+ ..-.....+          .-+.++                              +... +..+..  ..... 
T Consensus        85 ~~-~~-~~~~~~~~~----------~lv~e~------------------------------~~~~-L~~~~~--~~~~~-  118 (320)
T 2i6l_A           85 TD-DV-GSLTELNSV----------YIVQEY------------------------------METD-LANVLE--QGPLL-  118 (320)
T ss_dssp             CC------CCSCSEE----------EEEEEC------------------------------CSEE-HHHHHT--TCCCC-
T ss_pred             cc-cc-ccccccCce----------eEEeec------------------------------cCCC-HHHHhh--cCCcc-
Confidence            00 00 000000000          001111                              0000 000000  00000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++                        .+..+   ++.++.|+|  ++||+||||||+|||+..+  .+.+||+|||+
T Consensus       119 ~~~~~------------------------~~~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~~~--~~~~kl~Dfg~  167 (320)
T 2i6l_A          119 EEHAR------------------------LFMYQ---LLRGLKYIH--SANVLHRDLKPANLFINTE--DLVLKIGDFGL  167 (320)
T ss_dssp             HHHHH------------------------HHHHH---HHHHHHHHH--HTTCBCCCCSGGGEEEETT--TTEEEECCCTT
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--hCCEecCCCCHHHEEEcCC--CCeEEEccCcc
Confidence            00010                        02333   667788888  9999999999999999532  24689999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++........     .......+||+.|+|||++..     ...|+.++|||||||++|+|++|.+||.+.+..      
T Consensus       168 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------  231 (320)
T 2i6l_A          168 ARIMDPHYSH-----KGHLSEGLVTKWYRSPRLLLS-----PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL------  231 (320)
T ss_dssp             CBCC-------------CCCGGGSCCTTCCHHHHHC-----TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------
T ss_pred             ccccCCCccc-----ccccccccccccccCcHHhcC-----cccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH------
Confidence            8754321110     112345678999999999863     246889999999999999999999999875421      


Q ss_pred             CccchhhHHHHHHHHhcCC----------------------CCCCC----CCCCCCCHHHHHHHHHhccccccCCCCHHH
Q psy16343        363 GETCHACQEILFHSIQQGH----------------------YDFPE----GEWSTISDEAKDLIRRLLVKDARKRLSAAS  416 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~----------------------~~~p~----~~~~~~s~~~~dli~~lL~~dP~~R~ta~e  416 (539)
                               .....+....                      ...+.    ..+..+++++++||.+||..||.+|||++|
T Consensus       232 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  302 (320)
T 2i6l_A          232 ---------EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE  302 (320)
T ss_dssp             ---------HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             ---------HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHH
Confidence                     1111111110                      01111    113468999999999999999999999999


Q ss_pred             HhcCCCccCCCC
Q psy16343        417 VLKHPWISTAGT  428 (539)
Q Consensus       417 ~l~Hpw~~~~~~  428 (539)
                      +|+||||+....
T Consensus       303 ll~hp~~~~~~~  314 (320)
T 2i6l_A          303 ALSHPYMSIYSF  314 (320)
T ss_dssp             HHTSHHHHTTCC
T ss_pred             HhCCcccccccC
Confidence            999999987654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.8e-39  Score=329.67  Aligned_cols=275  Identities=24%  Similarity=0.320  Sum_probs=174.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      -+.|++ .+.||+|+||.||+|++..+++.||||++......  ....+.+|++++..+ +||||+++++++.+....+ 
T Consensus        24 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~-  100 (331)
T 4aaa_A           24 MEKYEN-LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWY-  100 (331)
T ss_dssp             GGGEEE-EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE-
T ss_pred             hhhhee-eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEE-
Confidence            445665 47899999999999999999999999998643322  234567899999997 5999999999987654332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++.-+ +              .+.........+..+                
T Consensus       101 --lv-----------------------~e~~~~-~--------------~l~~~~~~~~~~~~~----------------  124 (331)
T 4aaa_A          101 --LV-----------------------FEFVDH-T--------------ILDDLELFPNGLDYQ----------------  124 (331)
T ss_dssp             --EE-----------------------EECCSE-E--------------HHHHHHHSTTCCCHH----------------
T ss_pred             --EE-----------------------EecCCc-c--------------hHHHHHhhccCCCHH----------------
Confidence              11                       111000 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .+|   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       125 -~~~---~---------------------~~~q---i~~~l~~LH--~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~  171 (331)
T 4aaa_A          125 -VVQ---K---------------------YLFQ---IINGIGFCH--SHNIIHRDIKPENILVS---QSGVVKLCDFGFA  171 (331)
T ss_dssp             -HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             -HHH---H---------------------HHHH---HHHHHHHHH--HCCEEccCcChheEEEc---CCCcEEEEeCCCc
Confidence             000   0                     2333   667788888  99999999999999994   4457999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.......        .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+......
T Consensus       172 ~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (331)
T 4aaa_A          172 RTLAAPGE--------VYDDEVATRWYRAPELLVG-----DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM  238 (331)
T ss_dssp             --------------------CCCCCTTCCHHHHTT-----CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             eeecCCcc--------ccCCCcCCccccCcccccC-----CCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            75432211        1235689999999999863     2368899999999999999999999998764211000000


Q ss_pred             ccch---hhHHHHHHH-HhcCCCCCCC--------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        364 ETCH---ACQEILFHS-IQQGHYDFPE--------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       364 ~~~~---~~~~~~~~~-i~~~~~~~p~--------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ....   ......+.. .......+|.        ..+..+++++++||.+||..||.+|||++|+|+||||..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          239 MCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             HHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             HHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            0000   000000000 0001111111        113467999999999999999999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.4e-38  Score=321.27  Aligned_cols=270  Identities=24%  Similarity=0.326  Sum_probs=178.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEc-cCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhc--CCCCeeeeeeeeccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNI-LTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDD  118 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~-~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~  118 (539)
                      .+.+.|++ .+.||+|+||.||+|.+. .+++.||||++....  ......+.+|+.++..+.  +||||+++++++...
T Consensus         8 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            8 RADQQYEC-VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   86 (326)
T ss_dssp             CGGGTEEE-EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             Cchhceee-eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence            35567776 578999999999999995 678899999986422  122335668888877663  699999999988632


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ....           ...+.          -+.++.-+                .+...           +....   ..
T Consensus        87 ~~~~-----------~~~~~----------lv~e~~~~----------------~L~~~-----------l~~~~---~~  115 (326)
T 1blx_A           87 RTDR-----------ETKLT----------LVFEHVDQ----------------DLTTY-----------LDKVP---EP  115 (326)
T ss_dssp             ECSS-----------EEEEE----------EEEECCSC----------------BHHHH-----------HHHSC---TT
T ss_pred             ccCC-----------CceEE----------EEEecCCC----------------CHHHH-----------HHhcc---cC
Confidence            1100           00000          01111000                00000           00000   00


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      ..+ ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       116 ~~~-~~~~~~------------------------~~~q---i~~~l~~lH--~~gi~H~dlkp~Nili~---~~~~~kl~  162 (326)
T 1blx_A          116 GVP-TETIKD------------------------MMFQ---LLRGLDFLH--SHRVVHRDLKPQNILVT---SSGQIKLA  162 (326)
T ss_dssp             CSC-HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTCCEEEC
T ss_pred             CCC-HHHHHH------------------------HHHH---HHHHHHHHH--HCCceeccCCHHHeEEc---CCCCEEEe
Confidence            000 000000                        2333   667778888  99999999999999994   44569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+++......         .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+..  
T Consensus       163 Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--  225 (326)
T 1blx_A          163 DFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--  225 (326)
T ss_dssp             SCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred             cCcccccccCCC---------CccccccccceeCHHHHhc------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH--
Confidence            999987543221         1235689999999999863      46889999999999999999999999875421  


Q ss_pred             CcccCccchhhHHHHHHHHhcC-----CCCCC------------------CCCCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        359 GWQRGETCHACQEILFHSIQQG-----HYDFP------------------EGEWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~-----~~~~p------------------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                                   .....+...     ...++                  ...+..++.++++||.+||..||.+|||+.
T Consensus       226 -------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  292 (326)
T 1blx_A          226 -------------DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY  292 (326)
T ss_dssp             -------------HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             -------------HHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHH
Confidence                         122222210     00010                  112356899999999999999999999999


Q ss_pred             HHhcCCCccCCCC
Q psy16343        416 SVLKHPWISTAGT  428 (539)
Q Consensus       416 e~l~Hpw~~~~~~  428 (539)
                      |+|+||||.....
T Consensus       293 e~l~hp~~~~~~~  305 (326)
T 1blx_A          293 SALSHPYFQDLER  305 (326)
T ss_dssp             HHHTSGGGTTCCC
T ss_pred             HHhcCccccccch
Confidence            9999999987644

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=4.2e-40  Score=342.10  Aligned_cols=146  Identities=20%  Similarity=0.256  Sum_probs=110.7

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++....           ...+.+| +.|+|||++...
T Consensus       215 i~~aL~~LH--~~~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~  277 (377)
T 3byv_A          215 VIRLLASLH--HYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELEARR  277 (377)
T ss_dssp             HHHHHHHHH--HTTEECSCCCGGGEEEC---TTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHHHHH
T ss_pred             HHHHHHHHH--hCCeecCCCCHHHEEEc---CCCCEEEEechhheecCC-----------cccCCCC-cCccChhhhccc
Confidence            677888888  89999999999999995   345799999999874221           2346688 999999999741


Q ss_pred             C-----CCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCH
Q psy16343        320 M-----GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD  394 (539)
Q Consensus       320 ~-----~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~  394 (539)
                      .     +.....|+.++|||||||++|+|++|.+||.+.+..+.               ...+..        .+..+++
T Consensus       278 ~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~---------------~~~~~~--------~~~~~~~  334 (377)
T 3byv_A          278 ATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG---------------SEWIFR--------SCKNIPQ  334 (377)
T ss_dssp             TSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC---------------SGGGGS--------SCCCCCH
T ss_pred             ccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc---------------hhhhhh--------hccCCCH
Confidence            0     00001589999999999999999999999987543221               111111        1246899


Q ss_pred             HHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        395 EAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       395 ~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      ++++||.+||..||.+|||+.|+|+||||..
T Consensus       335 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          335 PVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            9999999999999999999999999999964

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4.2e-38  Score=324.67  Aligned_cols=279  Identities=22%  Similarity=0.337  Sum_probs=170.4

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-----------CHHHHHHHHHHHHhhcCCCCeeeeee
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-----------SRSRVFKEVETFHHCQGHPNIIQLLE  113 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-----------~~~~~~~Ei~~l~~~~~HpnIv~l~~  113 (539)
                      +.+.|++ .+.||+|+||.||+|.+.. |..||||++.+....           ....+.+|++++.++ +||||+++++
T Consensus        20 ~~~~y~~-~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   96 (362)
T 3pg1_A           20 MQSPYTV-QRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRD   96 (362)
T ss_dssp             TTCSCEE-EEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSE
T ss_pred             hccceEE-eEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceee
Confidence            4566776 5789999999999998755 899999998542211           125788999999997 5999999999


Q ss_pred             eecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccc
Q psy16343        114 YYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAF  192 (539)
Q Consensus       114 ~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~  192 (539)
                      ++.......           ...+.          -+.++.-+                .+...+.. ...+.++.    
T Consensus        97 ~~~~~~~~~-----------~~~~~----------lv~e~~~~----------------~l~~~~~~~~~~~~~~~----  135 (362)
T 3pg1_A           97 IFVHFEEPA-----------MHKLY----------LVTELMRT----------------DLAQVIHDQRIVISPQH----  135 (362)
T ss_dssp             EEEECCTTT-----------CCEEE----------EEEECCSE----------------EHHHHHHCTTSCCCHHH----
T ss_pred             eEEeccCCC-----------cceEE----------EEEccCCC----------------CHHHHHHhcccCCCHHH----
Confidence            885432110           00000          01111000                00000000 00000000    


Q ss_pred             cCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC
Q psy16343        193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL  272 (539)
Q Consensus       193 ~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~  272 (539)
                                   ++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..
T Consensus       136 -------------~~------------------------~~~~q---i~~~l~~lH--~~~ivH~Dlkp~NIl~~---~~  170 (362)
T 3pg1_A          136 -------------IQ------------------------YFMYH---ILLGLHVLH--EAGVVHRDLHPGNILLA---DN  170 (362)
T ss_dssp             -------------HH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TT
T ss_pred             -------------HH------------------------HHHHH---HHHHHHHHH--HCcCEecCCChHHEEEc---CC
Confidence                         00                        03334   667788888  89999999999999994   44


Q ss_pred             CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  352 (539)
Q Consensus       273 ~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~  352 (539)
                      +.+||+|||++.......         .....+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+
T Consensus       171 ~~~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~l~~g~~pf~~  236 (362)
T 3pg1_A          171 NDITICDFNLAREDTADA---------NKTHYVTHRWYRAPELVMQ-----FKGFTKLVDMWSAGCVMAEMFNRKALFRG  236 (362)
T ss_dssp             CCEEECCTTC------------------------CGGGCCHHHHTT-----CTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCEEEEecCccccccccc---------ccceecccceecCcHHhcC-----CCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence            569999999987433221         1235689999999999863     24688999999999999999999999987


Q ss_pred             CCCCCCCcccCccchhh---------HHHHHHHHhcCCCCCCCCCC----CCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        353 NCGEDCGWQRGETCHAC---------QEILFHSIQQGHYDFPEGEW----STISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~~~~~p~~~~----~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+..+......+.....         .......+......++...|    ..+++++++||.+||..||.+|||++|+|+
T Consensus       237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          237 STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            54211000000000000         00000011111122222222    356899999999999999999999999999


Q ss_pred             CCCccCC
Q psy16343        420 HPWISTA  426 (539)
Q Consensus       420 Hpw~~~~  426 (539)
                      ||||...
T Consensus       317 hp~f~~~  323 (362)
T 3pg1_A          317 HPYFESL  323 (362)
T ss_dssp             SGGGTTT
T ss_pred             Cchhhhc
Confidence            9999865

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.2e-38  Score=315.33  Aligned_cols=259  Identities=22%  Similarity=0.355  Sum_probs=177.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..|++ .+.||+|+||.||+|.+..++..||+|++....  ......+.+|+.++..+ +||||+++++++.+.....  
T Consensus        26 ~~~~~-~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~--  101 (290)
T 1t4h_A           26 RFLKF-DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGK--  101 (290)
T ss_dssp             CEEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSC--
T ss_pred             eeEEe-eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCC--
Confidence            34554 567999999999999999999999999986432  22345678899999987 5999999999886532110  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                 +.+         .-+.++.-+ +              .+...+.....+..                 .
T Consensus       102 -----------~~~---------~lv~e~~~~-~--------------~L~~~l~~~~~~~~-----------------~  129 (290)
T 1t4h_A          102 -----------KCI---------VLVTELMTS-G--------------TLKTYLKRFKVMKI-----------------K  129 (290)
T ss_dssp             -----------EEE---------EEEEECCCS-C--------------BHHHHHHHHSSCCH-----------------H
T ss_pred             -----------ceE---------EEEEEecCC-C--------------CHHHHHHHccCCCH-----------------H
Confidence                       000         001111000 0              00000000000000                 0


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      .+|                        .|..+   ++.++.|+|  ++|  |+||||||+|||+..  ..+.+||+|||+
T Consensus       130 ~~~------------------------~~~~q---i~~~l~~lH--~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~  178 (290)
T 1t4h_A          130 VLR------------------------SWCRQ---ILKGLQFLH--TRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGL  178 (290)
T ss_dssp             HHH------------------------HHHHH---HHHHHHHHH--TSSSCCCCSCCCGGGEEESS--TTSCEEECCTTG
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--cCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCC
Confidence            000                        02334   667788888  888  999999999999952  345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +......          .....+||+.|+|||++.       ..|+.++|+|||||++|+|++|..||.+...       
T Consensus       179 ~~~~~~~----------~~~~~~~t~~y~aPE~~~-------~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------  234 (290)
T 1t4h_A          179 ATLKRAS----------FAKAVIGTPEFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYPYSECQN-------  234 (290)
T ss_dssp             GGGCCTT----------SBEESCSSCCCCCGGGGG-------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------
T ss_pred             ccccccc----------ccccccCCcCcCCHHHHh-------ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------
Confidence            8643221          123568999999999885       2488999999999999999999999976432       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                             ...+...+..+..  +.......++++++||.+||..||.+|||++|+|+||||+.
T Consensus       235 -------~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          235 -------AAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -------HHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -------HHHHHHHHhccCC--ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                   2334445544422  11122457899999999999999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.5e-38  Score=315.10  Aligned_cols=255  Identities=27%  Similarity=0.449  Sum_probs=175.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|.+ .+.||+|+||.||+|.+..+++.||||++...   .......+.+|++++..+ +||||+++++++.+....+ 
T Consensus        11 ~~y~i-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   87 (276)
T 2h6d_A           11 GHYVL-GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFF-   87 (276)
T ss_dssp             TTEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             ccEEE-EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEE-
Confidence            45665 57899999999999999999999999998542   123355788999999987 5999999999987654332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++--+ +              .+...+.....+.++                
T Consensus        88 --lv-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~----------------  111 (276)
T 2h6d_A           88 --MV-----------------------MEYVSG-G--------------ELFDYICKHGRVEEM----------------  111 (276)
T ss_dssp             --EE-----------------------EECCCS-C--------------BHHHHHHHHCSCCHH----------------
T ss_pred             --EE-----------------------EeccCC-C--------------cHHHHHhccCCCCHH----------------
Confidence              11                       111000 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       .++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       112 -~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~  158 (276)
T 2h6d_A          112 -EARR------------------------LFQQ---ILSAVDYCH--RHMVVHRDLKPENVLLD---AHMNAKIADFGLS  158 (276)
T ss_dssp             -HHHH------------------------HHHH---HHHHHHHHH--HHCSSCCCCCGGGEEEC---TTSCEEECCCCGG
T ss_pred             -HHHH------------------------HHHH---HHHHHHHHH--HCCCccCCCChhhEEEC---CCCCEEEeecccc
Confidence             0110                        2333   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      .......         .....+||+.|+|||++.+     ...++.++|+|||||++|+|++|..||.+..         
T Consensus       159 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~---------  215 (276)
T 2h6d_A          159 NMMSDGE---------FLRTSCGSPNYAAPEVISG-----RLYAGPEVDIWSCGVILYALLCGTLPFDDEH---------  215 (276)
T ss_dssp             GCCCC----------------------CCTGGGTT-----SCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             cccCCCc---------ceecccCCccccCHHHHcC-----CCCCCccchHHHHHHHHHHHHhCCCCCCCCc---------
Confidence            7543221         1235689999999999863     1223678999999999999999999997642         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            ...+...+..+.+.+|.    .++.++++||.+||..||.+|||++|+++||||+..
T Consensus       216 ------~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          216 ------VPTLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             ------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ------HHHHHHHhhcCcccCch----hcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence                  23456677777776664    579999999999999999999999999999999754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.7e-38  Score=318.53  Aligned_cols=264  Identities=22%  Similarity=0.343  Sum_probs=177.5

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      ...+.+.|++ .+.||+|+||.||+|.+..++..||||++......   ...++.+|+.++..+ +||||+++++++++.
T Consensus         6 g~~~~~~y~i-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            6 GKIINERYKI-VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEED   83 (294)
T ss_dssp             SSCEETTEEE-EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECS
T ss_pred             hhHhhccEEE-EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeC
Confidence            3446677886 57899999999999999999999999998543322   235678899999887 599999999998765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|                       .++--+ +              .+...+....-+.++           
T Consensus        84 ~~~~---lv-----------------------~e~~~g-~--------------~L~~~l~~~~~~~~~-----------  111 (294)
T 4eqm_A           84 DCYY---LV-----------------------MEYIEG-P--------------TLSEYIESHGPLSVD-----------  111 (294)
T ss_dssp             SEEE---EE-----------------------EECCCS-C--------------BHHHHHHHHCSCCHH-----------
T ss_pred             CeEE---EE-----------------------EeCCCC-C--------------CHHHHHHhcCCCCHH-----------
Confidence            4433   11                       111000 0              000000000000000           


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                            .++                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+
T Consensus       112 ------~~~------------------------~~~~q---i~~~l~~lH--~~~i~H~Dlkp~Nil~~---~~~~~kl~  153 (294)
T 4eqm_A          112 ------TAI------------------------NFTNQ---ILDGIKHAH--DMRIVHRDIKPQNILID---SNKTLKIF  153 (294)
T ss_dssp             ------HHH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEEC
T ss_pred             ------HHH------------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEC---CCCCEEEE
Confidence                  000                        03334   667788888  99999999999999994   44579999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||++........       ......+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+.   
T Consensus       154 Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---  217 (294)
T 4eqm_A          154 DFGIAKALSETSL-------TQTNHVLGTVQYFSPEQAKG------EATDECTDIYSIGIVLYEMLVGEPPFNGETA---  217 (294)
T ss_dssp             CCSSSTTC--------------------CCSSCCHHHHHT------CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH---
T ss_pred             eCCCccccccccc-------cccCccccCccccCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---
Confidence            9999875432211       11235689999999999873      4688999999999999999999999987532   


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                 .......+.......+...+..+++.+.++|.+||.+||.+||+..+.+.+.|..
T Consensus       218 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          218 -----------VSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             -----------HHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             -----------HHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence                       1223333433333332333457899999999999999999999777777777654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-38  Score=319.32  Aligned_cols=274  Identities=23%  Similarity=0.332  Sum_probs=180.3

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.+.|++ .++||+|+||.||+|.+..+++.||||++.+.. ......+.+|++++.++ +||||+++++++.+.....
T Consensus         6 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A            6 TSNHLWLL-SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRH   83 (319)
T ss_dssp             CSSEEEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCC
T ss_pred             CCCCCEEE-EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCce
Confidence            35667776 578999999999999999999999999996532 23456778999999997 5999999999886543210


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                    +.          -+.++.-+ +              .+...+...       ..      ....+ 
T Consensus        84 --------------~~----------lv~e~~~~-~--------------~L~~~l~~~-------~~------~~~~~-  110 (319)
T 4euu_A           84 --------------KV----------LIMEFCPC-G--------------SLYTVLEEP-------SN------AYGLP-  110 (319)
T ss_dssp             --------------EE----------EEEECCTT-C--------------BHHHHHHSG-------GG------TTCCC-
T ss_pred             --------------EE----------EEEeCCCC-C--------------CHHHHHHHh-------cc------ccCCC-
Confidence                          00          01121100 0              000000000       00      00000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecC-CCCCCCceeccCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVH-PDQLSPVKLCDFD  281 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~-~~~~~~ikl~DFG  281 (539)
                      ...++.                        +..|   ++.++.|+|  ++||+||||||+|||+.. ++..+.+||+|||
T Consensus       111 ~~~~~~------------------------i~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg  161 (319)
T 4euu_A          111 ESEFLI------------------------VLRD---VVGGMNHLR--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (319)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--HCCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence            000110                        2333   667788888  999999999999999732 2334568999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCC--CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG--PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~--~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      +++......         ...+.+||+.|+|||++.....  .....|+.++|||||||++|+|++|.+||.+.....  
T Consensus       162 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--  230 (319)
T 4euu_A          162 AARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--  230 (319)
T ss_dssp             TCEECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--
T ss_pred             CceecCCCC---------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--
Confidence            997543322         2345689999999999863110  012468899999999999999999999997543211  


Q ss_pred             cccCccchhhHHHHHHHHhcCCC-------------------CCCC--CCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        360 WQRGETCHACQEILFHSIQQGHY-------------------DFPE--GEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~-------------------~~p~--~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                               ....++..+..+.+                   .+|.  .....+++.+.+||.+||+.||++|||++|+|
T Consensus       231 ---------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell  301 (319)
T 4euu_A          231 ---------RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF  301 (319)
T ss_dssp             ---------GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHH
T ss_pred             ---------hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhh
Confidence                     11223444443332                   1111  11123457899999999999999999999999


Q ss_pred             cCC
Q psy16343        419 KHP  421 (539)
Q Consensus       419 ~Hp  421 (539)
                      +||
T Consensus       302 ~h~  304 (319)
T 4euu_A          302 AET  304 (319)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            997

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.1e-37  Score=312.13  Aligned_cols=281  Identities=23%  Similarity=0.386  Sum_probs=180.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +|.+.|++ .+.||+|+||.||+|++..+++.||||++... ......+.+|++++..+ +||||+++++++.+......
T Consensus         3 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~   79 (303)
T 1zy4_A            3 RYASDFEE-IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVK   79 (303)
T ss_dssp             HHHHHEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC
T ss_pred             cccccchh-hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhh
Confidence            46677776 57899999999999999999999999999642 12345678899999987 59999999998866433210


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         .+...-....+          .-+.++.-+ +              .+...           +..    ..... ..
T Consensus        80 ---~~~~~~~~~~~----------~lv~e~~~~-~--------------~L~~~-----------l~~----~~~~~-~~  115 (303)
T 1zy4_A           80 ---PMTAVKKKSTL----------FIQMEYCEN-G--------------TLYDL-----------IHS----ENLNQ-QR  115 (303)
T ss_dssp             ---------CEEEE----------EEEEECCCS-C--------------BHHHH-----------HHH----SCGGG-CH
T ss_pred             ---hhcccccCCce----------EEEEecCCC-C--------------CHHHh-----------hhc----ccccc-ch
Confidence               00000000000          011111000 0              00000           000    00000 00


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       116 ~~~~~------------------------i~~q---i~~~l~~LH--~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~  163 (303)
T 1zy4_A          116 DEYWR------------------------LFRQ---ILEALSYIH--SQGIIHRDLKPMNIFID---ESRNVKIGDFGLA  163 (303)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECCCCCC
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--hCCeecccCCHHhEEEc---CCCCEEEeeCcch
Confidence            01111                        2333   667788888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCC------CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        284 SGIKFNTSVH------SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       284 ~~~~~~~~~~------~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      ..........      .+.......+.+||+.|+|||++.+     ...|+.++|||||||++|+|++   ||...    
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~---p~~~~----  231 (303)
T 1zy4_A          164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-----TGHYNEKIDMYSLGIIFFEMIY---PFSTG----  231 (303)
T ss_dssp             SCTTC-------------------------CTTSCHHHHTS-----CSCCCTHHHHHHHHHHHHHHHS---CCSSH----
T ss_pred             hhcccccchhccccccccccccccccCCCcccccCcccccC-----CCCCcchhhHHHHHHHHHHHHh---ccCCc----
Confidence            7543211000      0000112346789999999999863     2358899999999999999998   56421    


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                .....+...+......+|.......+..+++||.+||..||.+|||++|+++||||..
T Consensus       232 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          232 ----------MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             ----------HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             ----------hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence                      1123456667777777777666678899999999999999999999999999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1e-38  Score=324.86  Aligned_cols=266  Identities=23%  Similarity=0.386  Sum_probs=174.7

Q ss_pred             cccchhcccCceeceeCceEEEEEEE-ccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc-----CCCCeeeeeeeecc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVN-ILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-----GHPNIIQLLEYYED  117 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~-~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~-----~HpnIv~l~~~~~~  117 (539)
                      .+.+.|++ .+.||+|+||.||+|.+ ..+++.||||+++... .....+.+|++++..+.     .|++|+++++++++
T Consensus        11 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~   88 (339)
T 1z57_A           11 VLSARYEI-VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH   88 (339)
T ss_dssp             EETTTEEE-EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred             CccCceEE-EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence            35667876 57899999999999998 5688999999996432 22456778998888764     23459999999876


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|                       .++. + +              .+...           +..   ...
T Consensus        89 ~~~~~---lv-----------------------~e~~-~-~--------------~l~~~-----------l~~---~~~  112 (339)
T 1z57_A           89 HGHIC---IV-----------------------FELL-G-L--------------STYDF-----------IKE---NGF  112 (339)
T ss_dssp             TTEEE---EE-----------------------EECC-C-C--------------BHHHH-----------HHH---TTT
T ss_pred             CCcEE---EE-----------------------EcCC-C-C--------------CHHHH-----------HHh---cCC
Confidence            54332   11                       1110 0 0              00000           000   000


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC------
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ------  271 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~------  271 (539)
                      ...+ ...++.                        +..|   ++.++.|+|  ++||+||||||+|||+...+.      
T Consensus       113 ~~~~-~~~~~~------------------------~~~q---i~~~l~~lH--~~~ivH~Dlkp~Nil~~~~~~~~~~~~  162 (339)
T 1z57_A          113 LPFR-LDHIRK------------------------MAYQ---ICKSVNFLH--SNKLTHTDLKPENILFVQSDYTEAYNP  162 (339)
T ss_dssp             CCCC-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred             CCCc-HHHHHH------------------------HHHH---HHHHHHHHH--HCCCcCCCCCHHHEEEeccccccccCC
Confidence            0000 000000                        3334   677888888  899999999999999965331      


Q ss_pred             ----------CCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHH
Q psy16343        272 ----------LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY  341 (539)
Q Consensus       272 ----------~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily  341 (539)
                                .+.+||+|||+++.....           ..+.+||+.|+|||++.+      ..|+.++|||||||++|
T Consensus       163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~  225 (339)
T 1z57_A          163 KIKRDERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILA------LGWSQPCDVWSIGCILI  225 (339)
T ss_dssp             ---CEEEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTT------SCCCTHHHHHHHHHHHH
T ss_pred             ccccccccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhC------CCCCcchhhHHHHHHHH
Confidence                      456999999998743211           235689999999999863      46899999999999999


Q ss_pred             HHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC------------CCC-CCCCCCC------------------
Q psy16343        342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG------------HYD-FPEGEWS------------------  390 (539)
Q Consensus       342 ~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------------~~~-~p~~~~~------------------  390 (539)
                      +|++|.+||.+.+..+            .......+...            .+. .....|.                  
T Consensus       226 el~~g~~pf~~~~~~~------------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (339)
T 1z57_A          226 EYYLGFTVFPTHDSKE------------HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE  293 (339)
T ss_dssp             HHHHSSCSCCCSCHHH------------HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGG
T ss_pred             HHHhCCCCCCCCChHH------------HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhh
Confidence            9999999998754211            00111111110            000 0000111                  


Q ss_pred             ------CCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        391 ------TISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       391 ------~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            ..++++++||.+||..||.+|||++|+|+||||...
T Consensus       294 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          294 FMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             GCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             hcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                  124678899999999999999999999999999753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.3e-38  Score=323.41  Aligned_cols=255  Identities=25%  Similarity=0.395  Sum_probs=179.5

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC------CHHHHHHHHHHHHhhc-CCCCeeeeeeee
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH------SRSRVFKEVETFHHCQ-GHPNIIQLLEYY  115 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~------~~~~~~~Ei~~l~~~~-~HpnIv~l~~~~  115 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+++.||||++.+....      ....+.+|+.++.++. +||||+++++++
T Consensus        39 ~~~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~  117 (320)
T 3a99_A           39 EPLESQYQV-GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF  117 (320)
T ss_dssp             -CCTTTEEE-EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CCccCceEE-EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence            346777876 57899999999999999999999999999643211      1234668999999886 379999999999


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      .+....+   .|                       .++.-+.+              .+...+.....+..+        
T Consensus       118 ~~~~~~~---lv-----------------------~e~~~~~~--------------~L~~~l~~~~~l~~~--------  149 (320)
T 3a99_A          118 ERPDSFV---LI-----------------------LERPEPVQ--------------DLFDFITERGALQEE--------  149 (320)
T ss_dssp             ECSSEEE---EE-----------------------EECCSSEE--------------EHHHHHHHHCSCCHH--------
T ss_pred             ecCCcEE---EE-----------------------EEcCCCCc--------------cHHHHHhccCCCCHH--------
Confidence            7654332   11                       11100000              000000000000000        


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                               .+|.                        +..|   ++.++.|+|  ++||+||||||+|||+..  ..+.+
T Consensus       150 ---------~~~~------------------------i~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~~--~~~~~  189 (320)
T 3a99_A          150 ---------LARS------------------------FFWQ---VLEAVRHCH--NCGVLHRDIKDENILIDL--NRGEL  189 (320)
T ss_dssp             ---------HHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEET--TTTEE
T ss_pred             ---------HHHH------------------------HHHH---HHHHHHHHH--HCCcEeCCCCHHHEEEeC--CCCCE
Confidence                     0110                        2333   677888888  999999999999999952  33569


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||+++.....          .....+||+.|+|||++..     ...++.++|||||||++|+|++|..||.+.  
T Consensus       190 kL~Dfg~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~Di~slG~il~el~~g~~pf~~~--  252 (320)
T 3a99_A          190 KLIDFGSGALLKDT----------VYTDFDGTRVYSPPEWIRY-----HRYHGRSAAVWSLGILLYDMVCGDIPFEHD--  252 (320)
T ss_dssp             EECCCTTCEECCSS----------CBCCCCSCGGGSCHHHHHH-----SCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--
T ss_pred             EEeeCccccccccc----------cccCCCCCccCCChHHhcc-----CCCCCccchHHhHHHHHHHHHHCCCCCCCh--
Confidence            99999998754321          1235689999999999864     223467899999999999999999999642  


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                         ..+..+...++    ..+++++++||.+||..||.+|||++|+++||||...
T Consensus       253 -------------------~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          253 -------------------EEIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             -------------------HHHHHCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             -------------------hhhhccccccc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence                               12233444444    3689999999999999999999999999999999754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.3e-38  Score=326.49  Aligned_cols=271  Identities=22%  Similarity=0.317  Sum_probs=178.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|++ .+.||+|+||.||+|.+..++..||+|++..... .....+.+|+.++..+ +||||+++++++.++...+  
T Consensus        32 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~--  107 (360)
T 3eqc_A           32 DDDFEK-ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS--  107 (360)
T ss_dssp             GGGEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEE--
T ss_pred             ccccee-eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEE--
Confidence            455665 4689999999999999999999999999965322 2345688999999987 6999999999987654332  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+.....+..+                 
T Consensus       108 -lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~-----------------  131 (360)
T 3eqc_A          108 -IC------MEHMD-----------------G-G--------------SLDQVLKKAGRIPEQ-----------------  131 (360)
T ss_dssp             -EE------ECCCT-----------------T-C--------------BHHHHHHHHSSCCHH-----------------
T ss_pred             -EE------EECCC-----------------C-C--------------CHHHHHHHcCCCCHH-----------------
Confidence             11      11110                 0 0              000000000000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .+   ..                     +..+   ++.++.|+|  ++ ||+||||||+|||+.   ..+.+||+|||++
T Consensus       132 ~~---~~---------------------i~~~---i~~~l~~lh--~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          132 IL---GK---------------------VSIA---VIKGLTYLR--EKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  179 (360)
T ss_dssp             HH---HH---------------------HHHH---HHHHHHHHH--HHHCCCCSCCSGGGEEEC---TTCCEEECCCCCC
T ss_pred             HH---HH---------------------HHHH---HHHHHHHHH--HhCCEEcCCccHHHEEEC---CCCCEEEEECCCC
Confidence            00   00                     2233   567778888  75 999999999999995   3456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc--
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ--  361 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~--  361 (539)
                      .......          ....+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+.+..+....  
T Consensus       180 ~~~~~~~----------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  243 (360)
T 3eqc_A          180 GQLIDSM----------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG  243 (360)
T ss_dssp             HHHHHHC--------------CCCCTTCCHHHHTT------CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC
T ss_pred             ccccccc----------ccCCCCCCCeECHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence            6442211          235689999999999863      4689999999999999999999999986532110000  


Q ss_pred             -------------------------cCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        362 -------------------------RGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       362 -------------------------~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                                               ...............+..+.. .++   ...++.++++||.+||..||.+|||++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~  320 (360)
T 3eqc_A          244 CQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP---SGVFSLEFQDFVNKCLIKNPAERADLK  320 (360)
T ss_dssp             ------------------------------CCCHHHHHHHHHHSCCCCCC---TTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred             ccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCC---cccccHHHHHHHHHHhhcChhhCCCHH
Confidence                                     000000001122233333322 222   245799999999999999999999999


Q ss_pred             HHhcCCCccCCC
Q psy16343        416 SVLKHPWISTAG  427 (539)
Q Consensus       416 e~l~Hpw~~~~~  427 (539)
                      |+|+||||....
T Consensus       321 ell~hp~~~~~~  332 (360)
T 3eqc_A          321 QLMVHAFIKRSD  332 (360)
T ss_dssp             HHHTSHHHHHHH
T ss_pred             HHhhChHhhcch
Confidence            999999997543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=7.9e-38  Score=313.95  Aligned_cols=269  Identities=25%  Similarity=0.308  Sum_probs=179.4

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..++..||+|++..........+.+|++++..+ +||||+++++++.+....+
T Consensus        15 ~~~~~~y~i-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   92 (302)
T 2j7t_A           15 LDPNEVWEI-VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLW   92 (302)
T ss_dssp             SCGGGTEEE-EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEE
T ss_pred             cCCccceee-cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEE
Confidence            346677876 46899999999999999999999999999765555667889999999987 5999999999887654322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .                       +.++--+ +              .+...           +...    ....+ 
T Consensus        93 ---l-----------------------v~e~~~~-~--------------~l~~~-----------~~~~----~~~~~-  115 (302)
T 2j7t_A           93 ---I-----------------------MIEFCPG-G--------------AVDAI-----------MLEL----DRGLT-  115 (302)
T ss_dssp             ---E-----------------------EEECCTT-E--------------EHHHH-----------HHHH----TSCCC-
T ss_pred             ---E-----------------------EEEeCCC-C--------------cHHHH-----------HHhh----ccCCC-
Confidence               1                       1111000 0              00000           0000    00000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       116 ~~~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~  163 (302)
T 2j7t_A          116 EPQIQV------------------------VCRQ---MLEALNFLH--SKRIIHRDLKAGNVLMT---LEGDIRLADFGV  163 (302)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCSGGGEEEC---TTSCEEECCCHH
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHh--cCCcccCCCCHHHEEEC---CCCCEEEEECCC
Confidence            000110                        2233   667778888  99999999999999994   445699999998


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +........        .....+||+.|+|||++..... ....|+.++|+|||||++|+|++|.+||.+.+.       
T Consensus       164 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------  227 (302)
T 2j7t_A          164 SAKNLKTLQ--------KRDSFIGTPYWMAPEVVMCETM-KDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------  227 (302)
T ss_dssp             HHHHHHHHH--------C-----CCGGGCCHHHHHHHHT-TSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------
T ss_pred             Ccccccccc--------ccccccCChhhcCCeeeccccC-CCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------
Confidence            753211110        1124689999999999842100 124688999999999999999999999976431       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                              ......+..+..... .....++.++++||.+||..||.+|||++|+++||||....
T Consensus       228 --------~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          228 --------MRVLLKIAKSDPPTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             --------HHHHHHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             --------HHHHHHHhccCCccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence                    223333443332211 11245789999999999999999999999999999998643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=313.36  Aligned_cols=272  Identities=22%  Similarity=0.315  Sum_probs=175.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|++ .+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.++.++.+||||+++++++........ 
T Consensus        22 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~-   98 (326)
T 2x7f_A           22 PAGIFEL-VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM-   98 (326)
T ss_dssp             CTTTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC-
T ss_pred             CCCcEEE-EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc-
Confidence            4556665 578999999999999999999999999996532 3456788999999998789999999998865321000 


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                               ...+.          -+.++.-+ +              .+...           +....   ....+ ..
T Consensus        99 ---------~~~~~----------lv~e~~~~-~--------------~L~~~-----------l~~~~---~~~~~-~~  129 (326)
T 2x7f_A           99 ---------DDQLW----------LVMEFCGA-G--------------SVTDL-----------IKNTK---GNTLK-EE  129 (326)
T ss_dssp             ---------CCEEE----------EEEECCTT-E--------------EHHHH-----------HHHSG---GGCCC-HH
T ss_pred             ---------cceEE----------EEEEcCCC-C--------------cHHHH-----------HHhcc---cCCCC-HH
Confidence                     00010          11111000 0              00000           00000   00000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .+|   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       130 ~~~---~---------------------i~~q---i~~~l~~lH--~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          130 WIA---Y---------------------ICRE---ILRGLSHLH--QHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSA  177 (326)
T ss_dssp             HHH---H---------------------HHHH---HHHHHHHHH--HTTCCCCCCSGGGEEEC---TTCCEEECCCTTTC
T ss_pred             HHH---H---------------------HHHH---HHHHHHHHH--HCCccccCCcHHHEEEc---CCCCEEEeeCcCce
Confidence            000   0                     2233   667788888  89999999999999994   44569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        .....+||+.|+|||++..... ....|+.++|||||||++|+|++|.+||.+...         
T Consensus       178 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------  239 (326)
T 2x7f_A          178 QLDRTVG--------RRNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---------  239 (326)
T ss_dssp             ---------------------CCGGGCCHHHHC---------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH---------
T ss_pred             ecCcCcc--------ccccccCCccccChhhhccccc-cCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH---------
Confidence            5432211        1235689999999999863110 124588999999999999999999999976431         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            ......+.....  +......+++++++||.+||..||.+||+++|+++||||...
T Consensus       240 ------~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          240 ------MRALFLIPRNPA--PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             ------HHHHHHHHHSCC--CCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             ------HHHHHHhhcCcc--ccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence                  112223333222  111224679999999999999999999999999999999754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=8.6e-38  Score=320.27  Aligned_cols=267  Identities=22%  Similarity=0.324  Sum_probs=184.4

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---C--------------HHHHHHHHHHHHhhcCCCC
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---S--------------RSRVFKEVETFHHCQGHPN  107 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~--------------~~~~~~Ei~~l~~~~~Hpn  107 (539)
                      +.+.|++ .+.||+|+||.||+|.+  +++.||||++......   .              ...+.+|++++..+ +|||
T Consensus        29 ~~~~y~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~  104 (348)
T 2pml_X           29 YINDYRI-IRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEY  104 (348)
T ss_dssp             EETTEEE-EEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTT
T ss_pred             ccCceEE-EEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCC
Confidence            4456775 57899999999999998  8999999998642111   0              16788999999997 5999


Q ss_pred             eeeeeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccc
Q psy16343        108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE  187 (539)
Q Consensus       108 Iv~l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE  187 (539)
                      |+++++++.+....+   .|      +|.+-                 + +              .+...+..       
T Consensus       105 i~~~~~~~~~~~~~~---lv------~e~~~-----------------~-~--------------~L~~~~~~-------  136 (348)
T 2pml_X          105 CLTCEGIITNYDEVY---II------YEYME-----------------N-D--------------SILKFDEY-------  136 (348)
T ss_dssp             BCCCSEEEESSSEEE---EE------EECCT-----------------T-C--------------BSSEESSS-------
T ss_pred             cceEEEEEeeCCeEE---EE------EeccC-----------------C-C--------------cHHHHHHH-------
Confidence            999999997764433   11      11110                 0 0              00000000       


Q ss_pred             ccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceee
Q psy16343        188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILC  266 (539)
Q Consensus       188 ~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~  266 (539)
                       ............+ ...+|.                        +..+   ++.++.|+|  + +||+||||||+|||+
T Consensus       137 -~~~l~~~~~~~~~-~~~~~~------------------------i~~q---i~~~l~~lH--~~~~i~H~dl~p~Nil~  185 (348)
T 2pml_X          137 -FFVLDKNYTCFIP-IQVIKC------------------------IIKS---VLNSFSYIH--NEKNICHRDVKPSNILM  185 (348)
T ss_dssp             -EESSCSSSCCCCC-HHHHHH------------------------HHHH---HHHHHHHHH--HTSCEECCCCCGGGEEE
T ss_pred             -hhhhhhccccCCC-HHHHHH------------------------HHHH---HHHHHHHHh--ccCCEeecCCChHhEEE
Confidence             0000000000000 000110                        2333   667788888  8 999999999999999


Q ss_pred             cCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCc-ccchhhhhHHHHHHHh
Q psy16343        267 VHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK-RCDLWSLGVVVYILLC  345 (539)
Q Consensus       267 ~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~-~~DiWSlGvily~ll~  345 (539)
                      .   ..+.+||+|||++......          .....+||+.|+|||++.+     ...|+. ++|||||||++|+|++
T Consensus       186 ~---~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~~Di~slG~il~~l~~  247 (348)
T 2pml_X          186 D---KNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSN-----ESSYNGAKVDIWSLGICLYVMFY  247 (348)
T ss_dssp             C---TTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSS-----CCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             c---CCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcC-----CCCCCcchhhHHHHHHHHHHHHh
Confidence            4   4457999999998754321          1235689999999999863     225666 8999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCC---------------CCCCCHHHHHHHHHhccccccC
Q psy16343        346 GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE---------------WSTISDEAKDLIRRLLVKDARK  410 (539)
Q Consensus       346 G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~---------------~~~~s~~~~dli~~lL~~dP~~  410 (539)
                      |.+||.+.+.              ...+...+..+.+.+|...               +..+++++++||.+||..||.+
T Consensus       248 g~~pf~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  313 (348)
T 2pml_X          248 NVVPFSLKIS--------------LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAE  313 (348)
T ss_dssp             SSCSSCCSSC--------------SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGG
T ss_pred             CCCCCCCCCc--------------HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhh
Confidence            9999987542              1346677777777766321               1468999999999999999999


Q ss_pred             CCCHHHHhcCCCccCC
Q psy16343        411 RLSAASVLKHPWISTA  426 (539)
Q Consensus       411 R~ta~e~l~Hpw~~~~  426 (539)
                      |||++|+++||||...
T Consensus       314 Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          314 RITSEDALKHEWLADT  329 (348)
T ss_dssp             SCCHHHHHTSGGGTTC
T ss_pred             CCCHHHHhcCccccCC
Confidence            9999999999999754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.2e-37  Score=311.38  Aligned_cols=258  Identities=25%  Similarity=0.391  Sum_probs=173.9

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCC
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLK  133 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK  133 (539)
                      .+||+|+||.||+|.+..+++.||||++..........+.+|+.++..+ +||||+++++++.+....+   .|      
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~---lv------   97 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIK---IF------   97 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE---EE------
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEE---EE------
Confidence            4899999999999999999999999999765544567788999999987 5999999999987654322   11      


Q ss_pred             CCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHH
Q psy16343        134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       134 ~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil  213 (539)
                                       .++.-+ +              .+...           +.....  ..... ...+|   .  
T Consensus        98 -----------------~e~~~~-~--------------~L~~~-----------l~~~~~--~~~~~-~~~~~---~--  126 (295)
T 2clq_A           98 -----------------MEQVPG-G--------------SLSAL-----------LRSKWG--PLKDN-EQTIG---F--  126 (295)
T ss_dssp             -----------------EECCSE-E--------------EHHHH-----------HHHTTC--CCTTC-HHHHH---H--
T ss_pred             -----------------EEeCCC-C--------------CHHHH-----------HHhhcc--CCCcc-HHHHH---H--
Confidence                             111000 0              00000           000000  00000 00000   0  


Q ss_pred             HHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCC
Q psy16343        214 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH  293 (539)
Q Consensus       214 ~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~  293 (539)
                                         +..+   ++.++.|+|  ++||+||||||+|||+...  .+.+||+|||++........  
T Consensus       127 -------------------~~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~--  178 (295)
T 2clq_A          127 -------------------YTKQ---ILEGLKYLH--DNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINP--  178 (295)
T ss_dssp             -------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEETT--TCCEEECCTTTCEESCC-----
T ss_pred             -------------------HHHH---HHHHHHHHH--hCCEEccCCChhhEEEECC--CCCEEEeecccccccCCCCC--
Confidence                               2233   667778888  9999999999999999642  35699999999875432111  


Q ss_pred             CCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHH
Q psy16343        294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL  373 (539)
Q Consensus       294 ~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~  373 (539)
                            ...+.+||+.|+|||++...    ...|+.++|||||||++|+|++|..||.+....             ....
T Consensus       179 ------~~~~~~~~~~y~aPE~~~~~----~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------------~~~~  235 (295)
T 2clq_A          179 ------CTETFTGTLQYMAPEIIDKG----PRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-------------QAAM  235 (295)
T ss_dssp             --------CCCCCCGGGCCHHHHHHG----GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-------------HHHH
T ss_pred             ------cccccCCCccccChhhhcCC----CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-------------hHHH
Confidence                  12356899999999998641    124788999999999999999999999753211             1112


Q ss_pred             HH-HHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        374 FH-SIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       374 ~~-~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      .. ........+|    ..+++++++||.+||..||++|||++|+|+||||....
T Consensus       236 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          236 FKVGMFKVHPEIP----ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHHHHCCCCCCC----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             Hhhcccccccccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            21 1222223333    46899999999999999999999999999999997543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.1e-38  Score=324.94  Aligned_cols=267  Identities=21%  Similarity=0.382  Sum_probs=174.8

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCC-cEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCC------eeeeeeee
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTE-LEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPN------IIQLLEYY  115 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~-~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~Hpn------Iv~l~~~~  115 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..++ ..||||++++. ......+.+|+.++..+. |+|      |+.+++++
T Consensus        15 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~   91 (355)
T 2eu9_A           15 DWLQERYEI-VGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIK-EKDKENKFLCVLMSDWF   91 (355)
T ss_dssp             CEETTTEEE-EEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHH-HHCTTSCSCBCCEEEEE
T ss_pred             ceecccEEE-EEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHh-hcCCCCceeEEEeeeee
Confidence            346777886 578999999999999998877 68999999642 223456778999888865 544      88888887


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      ......+   .|                       .++. + +              .+...           +..   .
T Consensus        92 ~~~~~~~---lv-----------------------~e~~-~-~--------------~l~~~-----------l~~---~  115 (355)
T 2eu9_A           92 NFHGHMC---IA-----------------------FELL-G-K--------------NTFEF-----------LKE---N  115 (355)
T ss_dssp             EETTEEE---EE-----------------------EECC-C-C--------------BHHHH-----------HHH---T
T ss_pred             eeCCeEE---EE-----------------------Eecc-C-C--------------ChHHH-----------HHh---c
Confidence            6554322   11                       1110 0 0              00000           000   0


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC------
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP------  269 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~------  269 (539)
                      .....       +...+.                  .+..|   ++.++.|+|  ++||+||||||+|||+...      
T Consensus       116 ~~~~~-------~~~~~~------------------~i~~q---i~~~L~~lH--~~~ivH~Dlkp~NIll~~~~~~~~~  165 (355)
T 2eu9_A          116 NFQPY-------PLPHVR------------------HMAYQ---LCHALRFLH--ENQLTHTDLKPENILFVNSEFETLY  165 (355)
T ss_dssp             TTCCC-------CHHHHH------------------HHHHH---HHHHHHHHH--TTTEECCCCCGGGEEESCCCEEEEE
T ss_pred             cCCCC-------CHHHHH------------------HHHHH---HHHHHHHHH--HCCcccCCCCHHHEEEecccccccc
Confidence            00000       000000                  03334   667788888  9999999999999999543      


Q ss_pred             ----------CCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHH
Q psy16343        270 ----------DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  339 (539)
Q Consensus       270 ----------~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvi  339 (539)
                                +..+.+||+|||+++.....           ..+.+||+.|+|||++.+      ..|+.++|||||||+
T Consensus       166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~i  228 (355)
T 2eu9_A          166 NEHKSCEEKSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILE------LGWAQPCDVWSIGCI  228 (355)
T ss_dssp             CCC-CCCEEEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTT------CCCCTHHHHHHHHHH
T ss_pred             cccccccccccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeec------CCCCCccchHHHHHH
Confidence                      23467999999998743211           235689999999999963      468999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC------------CCCCCC-CCCC----------------
Q psy16343        340 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG------------HYDFPE-GEWS----------------  390 (539)
Q Consensus       340 ly~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------------~~~~p~-~~~~----------------  390 (539)
                      +|+|++|.+||.+.+..+            .......+...            .+.+.. ..|.                
T Consensus       229 l~el~~g~~pf~~~~~~~------------~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (355)
T 2eu9_A          229 LFEYYRGFTLFQTHENRE------------HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL  296 (355)
T ss_dssp             HHHHHHSSCSCCCSSHHH------------HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCG
T ss_pred             HHHHHhCCCCCCCCCHHH------------HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcc
Confidence            999999999998754211            00011111100            000000 0111                


Q ss_pred             --------CCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        391 --------TISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       391 --------~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                              ..+.++++||.+||..||.+|||++|+|+||||....
T Consensus       297 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          297 KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             GGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             cccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                    1245888999999999999999999999999998653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4e-38  Score=317.94  Aligned_cols=255  Identities=27%  Similarity=0.431  Sum_probs=171.4

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC------CHHHHHHHHHHHHhhc---CCCCeeeeee
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH------SRSRVFKEVETFHHCQ---GHPNIIQLLE  113 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~------~~~~~~~Ei~~l~~~~---~HpnIv~l~~  113 (539)
                      ..|.+.|++ .+.||+|+||.||+|.+..+++.||||++......      ....+.+|+.++.++.   +||||+++++
T Consensus        27 ~~~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           27 EAFEAEYRL-GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             ------CEE-EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhceEE-eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            346777886 57899999999999999999999999999653221      1223457888888874   6999999999


Q ss_pred             eecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc
Q psy16343        114 YYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM  193 (539)
Q Consensus       114 ~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~  193 (539)
                      ++.+....+   .|                       .++.+..+              .+...+.....+..       
T Consensus       106 ~~~~~~~~~---~v-----------------------~e~~~~~~--------------~L~~~l~~~~~~~~-------  138 (312)
T 2iwi_A          106 WFETQEGFM---LV-----------------------LERPLPAQ--------------DLFDYITEKGPLGE-------  138 (312)
T ss_dssp             EC-----CE---EE-----------------------EECCSSEE--------------EHHHHHHHHCSCCH-------
T ss_pred             EEecCCeEE---EE-----------------------EEecCCCC--------------CHHHHHHhcCCCCH-------
Confidence            987654322   11                       11100000              00000000000000       


Q ss_pred             CCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCC
Q psy16343        194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLS  273 (539)
Q Consensus       194 ~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~  273 (539)
                                ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..  ..+
T Consensus       139 ----------~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~~--~~~  177 (312)
T 2iwi_A          139 ----------GPSRC------------------------FFGQ---VVAAIQHCH--SRGVVHRDIKDENILIDL--RRG  177 (312)
T ss_dssp             ----------HHHHH------------------------HHHH---HHHHHHHHH--HHTEECCCCSGGGEEEET--TTT
T ss_pred             ----------HHHHH------------------------HHHH---HHHHHHHHH--HCCeeecCCChhhEEEeC--CCC
Confidence                      00000                        2333   667788888  899999999999999952  335


Q ss_pred             CceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        274 PVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  353 (539)
Q Consensus       274 ~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~  353 (539)
                      .+||+|||++......          .....+||+.|+|||++..     ...++.++|||||||++|+|++|+.||.+.
T Consensus       178 ~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~g~~pf~~~  242 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDE----------PYTDFDGTRVYSPPEWISR-----HQYHALPATVWSLGILLYDMVCGDIPFERD  242 (312)
T ss_dssp             EEEECCCSSCEECCSS----------CBCCCCSCTTTSCHHHHHH-----SCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             eEEEEEcchhhhcccC----------cccccCCcccccCceeeec-----CCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence            6999999998754322          1235689999999999864     122345899999999999999999999642


Q ss_pred             CCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                           ..+......++.    .+++++++||.+||..||++|||++|+++||||...
T Consensus       243 ---------------------~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~  290 (312)
T 2iwi_A          243 ---------------------QEILEAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP  290 (312)
T ss_dssp             ---------------------HHHHHTCCCCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred             ---------------------HHHhhhccCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence                                 123334555553    689999999999999999999999999999999864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=7.7e-38  Score=331.26  Aligned_cols=275  Identities=25%  Similarity=0.297  Sum_probs=175.5

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+.+.|.+ .++||+|+||+||.+ ...+|+.||||++...   ....+.+|++++..+.+|||||++++++.+....+ 
T Consensus        12 ~l~~~~~~-~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~-   85 (434)
T 2rio_A           12 SLKNLVVS-EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY-   85 (434)
T ss_dssp             SCSSCEEE-EEEEEECSTTCEEEE-EESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEE-
T ss_pred             hhhheeec-cCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEE-
Confidence            35555553 578999999999864 4578999999998542   24567899999988768999999999887654433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 +                .+...+..... .++...         ....
T Consensus        86 --lv------~E~~~-----------------g----------------sL~~~l~~~~~-~~~~~~---------~~~~  114 (434)
T 2rio_A           86 --IA------LELCN-----------------L----------------NLQDLVESKNV-SDENLK---------LQKE  114 (434)
T ss_dssp             --EE------ECCCS-----------------E----------------EHHHHHHTC----------------------
T ss_pred             --EE------EecCC-----------------C----------------CHHHHHhccCC-Cchhhh---------hccc
Confidence              11      11110                 0                00000000000 000000         0000


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCC----------CCCC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP----------DQLS  273 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~----------~~~~  273 (539)
                      .++|.                        +..|   ++.++.|+|  ++||+||||||+|||+...          +...
T Consensus       115 ~~~~~------------------------i~~q---i~~aL~~LH--~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~  165 (434)
T 2rio_A          115 YNPIS------------------------LLRQ---IASGVAHLH--SLKIIHRDLKPQNILVSTSSRFTADQQTGAENL  165 (434)
T ss_dssp             CCHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred             hhHHH------------------------HHHH---HHHHHHHHH--HCCccccCCChHhEEEecCcccccccccCCCce
Confidence            01111                        3334   677788888  9999999999999999653          2345


Q ss_pred             CceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCC-CCCCCCCcccchhhhhHHHHHHHh-CCCCCC
Q psy16343        274 PVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG-PEASGYDKRCDLWSLGVVVYILLC-GYPPFY  351 (539)
Q Consensus       274 ~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~-~~~~~y~~~~DiWSlGvily~ll~-G~~PF~  351 (539)
                      .+||+|||+++.........    .....+.+||+.|+|||++.+... .....|+.++|||||||++|+|++ |.+||.
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~  241 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSF----RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG  241 (434)
T ss_dssp             EEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             EEEEcccccceecCCCCccc----eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence            69999999998654322100    011335689999999999963110 012468899999999999999999 999996


Q ss_pred             CCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCC---CCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE---WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~---~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      +...                 ....+..+.+.++...   +..+++++++||.+||..||.+|||+.|+++||||..
T Consensus       242 ~~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          242 DKYS-----------------RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             STTT-----------------HHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             Cchh-----------------hHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            5421                 1123444555444321   1235689999999999999999999999999999964

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.2e-37  Score=310.03  Aligned_cols=257  Identities=25%  Similarity=0.336  Sum_probs=182.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      ..+.|++ .+.||+|+||.||+|.+..+++.||||++.... ......+.+|+.++..+ +||||+++++++.+....+ 
T Consensus        20 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   96 (303)
T 3a7i_A           20 PEELFTK-LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLW-   96 (303)
T ss_dssp             GGGTEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE-
T ss_pred             hHHHHHH-hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEE-
Confidence            4556665 578999999999999999999999999996543 23457788999999987 6999999999887654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++--+ +              .+...+.. ..+..                 
T Consensus        97 --lv-----------------------~e~~~~-~--------------~L~~~~~~-~~~~~-----------------  118 (303)
T 3a7i_A           97 --II-----------------------MEYLGG-G--------------SALDLLEP-GPLDE-----------------  118 (303)
T ss_dssp             --EE-----------------------EECCTT-E--------------EHHHHHTT-SCCCH-----------------
T ss_pred             --EE-----------------------EEeCCC-C--------------cHHHHHhc-CCCCH-----------------
Confidence              11                       111000 0              00000000 00000                 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       119 ~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~  166 (303)
T 3a7i_A          119 TQIAT------------------------ILRE---ILKGLDYLH--SEKKIHRDIKAANVLLS---EHGEVKLADFGVA  166 (303)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--HCCCccCCCChheEEEC---CCCCEEEeecccc
Confidence            00100                        2233   667778888  99999999999999994   4456999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      ........        .....+||+.|+|||++..      ..|+.++|+|||||++|+|++|.+||.+..         
T Consensus       167 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------  223 (303)
T 3a7i_A          167 GQLTDTQI--------KRNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELARGEPPHSELH---------  223 (303)
T ss_dssp             EECBTTBC--------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---------
T ss_pred             eecCcccc--------ccCccCCCcCccCHHHHhc------CCCCchhhhHHHHHHHHHHccCCCCCCCcC---------
Confidence            75432211        1235689999999999863      468889999999999999999999997643         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            .......+..+....   ....++.++++||.+||..||.+|||++|+++||||...
T Consensus       224 ------~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          224 ------PMKVLFLIPKNNPPT---LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             ------HHHHHHHHHHSCCCC---CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             ------HHHHHHHhhcCCCCC---CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence                  122333444333211   124689999999999999999999999999999999753

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=7.8e-38  Score=318.13  Aligned_cols=268  Identities=22%  Similarity=0.273  Sum_probs=159.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|++ .+.||+|+||.||+|.+..+|+.||||++..... ....++.+|+..+.+..+||||+++++++.+....+   
T Consensus        22 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~---   97 (327)
T 3aln_A           22 EDLKD-LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW---   97 (327)
T ss_dssp             CSEEC--CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE---
T ss_pred             HHhhe-hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE---
Confidence            34554 5789999999999999999999999999965322 223456677775656568999999999987654332   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|      +|.+-              -++...                              +............ ...
T Consensus        98 lv------~e~~~--------------~~l~~~------------------------------~~~~~~~~~~~~~-~~~  126 (327)
T 3aln_A           98 IC------MELMS--------------TSFDKF------------------------------YKYVYSVLDDVIP-EEI  126 (327)
T ss_dssp             EE------ECCCS--------------EEHHHH------------------------------HHHHHHTTCCCCC-HHH
T ss_pred             EE------EeecC--------------CChHHH------------------------------HHHHHhhhcccCc-HHH
Confidence            11      11100              000000                              0000000000000 000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      +|   .                     +..+   ++.++.|+|  ++ ||+||||||+|||+..   .+.+||+|||+++
T Consensus       127 ~~---~---------------------i~~~---i~~~l~~lH--~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~~~  174 (327)
T 3aln_A          127 LG---K---------------------ITLA---TVKALNHLK--ENLKIIHRDIKPSNILLDR---SGNIKLCDFGISG  174 (327)
T ss_dssp             HH---H---------------------HHHH---HHHHHHHHH--HHHSCCCSCCCGGGEEEET---TTEEEECCCSSSC
T ss_pred             HH---H---------------------HHHH---HHHHHHHHh--ccCCEeECCCCHHHEEEcC---CCCEEEccCCCce
Confidence            00   0                     2233   566777787  88 9999999999999953   4569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......         .....+||+.|+|||++....  ....|+.++|||||||++|+|++|..||.+.....       
T Consensus       175 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------  236 (327)
T 3aln_A          175 QLVDSI---------AKTRDAGCRPYMAPERIDPSA--SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------  236 (327)
T ss_dssp             C-----------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------
T ss_pred             eccccc---------ccccCCCCccccCceeecccc--CcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------
Confidence            543221         122447999999999984210  12468899999999999999999999997643110       


Q ss_pred             cchhhHHHHHHHHhc-CCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        365 TCHACQEILFHSIQQ-GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~-~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            + ....+.. ....++...+..+++++++||.+||..||.+|||+.|+++||||...
T Consensus       237 ------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          237 ------D-QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             ----------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ------H-HHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence                  0 1111222 23344444556789999999999999999999999999999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=3.1e-38  Score=326.51  Aligned_cols=271  Identities=20%  Similarity=0.343  Sum_probs=172.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc----------CCCCeeeeeeeec
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ----------GHPNIIQLLEYYE  116 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~----------~HpnIv~l~~~~~  116 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++.+. ......+.+|+.++.++.          +||||+++++++.
T Consensus        19 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           19 ARYIL-VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CeEEE-EEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            45665 57899999999999999999999999999642 123456778998888764          2899999999887


Q ss_pred             ccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       117 ~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      .......            .+.+          +.++. + +              .+...           +....   
T Consensus        97 ~~~~~~~------------~~~l----------v~e~~-~-~--------------~L~~~-----------~~~~~---  124 (373)
T 1q8y_A           97 HKGPNGV------------HVVM----------VFEVL-G-E--------------NLLAL-----------IKKYE---  124 (373)
T ss_dssp             EEETTEE------------EEEE----------EECCC-C-E--------------EHHHH-----------HHHTT---
T ss_pred             ccCCCCc------------eEEE----------EEecC-C-C--------------CHHHH-----------HHHhh---
Confidence            5431100            0000          11110 0 0              00000           00000   


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCC---CC
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPD---QL  272 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~---~~  272 (539)
                      ....+ ...++   .                     +..|   ++.++.|+|  ++ ||+||||||+|||+...+   ..
T Consensus       125 ~~~~~-~~~~~---~---------------------i~~q---i~~aL~~lH--~~~~ivH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A          125 HRGIP-LIYVK---Q---------------------ISKQ---LLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             TSCCC-HHHHH---H---------------------HHHH---HHHHHHHHH--HTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             ccCCc-HHHHH---H---------------------HHHH---HHHHHHHHH--hcCCEEecCCChHHeEEeccCCCcCc
Confidence            00000 00000   0                     2333   667788888  88 999999999999995432   23


Q ss_pred             CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  352 (539)
Q Consensus       273 ~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~  352 (539)
                      ..+||+|||++......           ....+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+
T Consensus       175 ~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~  237 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLG------APWGCGADIWSTACLIFELITGDFLFEP  237 (373)
T ss_dssp             EEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHT------CCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             ceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhC------CCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            46999999998754321           234589999999999973      4689999999999999999999999987


Q ss_pred             CCCCCCCcccCccchhhHHHHHHH--------------------------------------HhcCCCCCCCCCCCCCCH
Q psy16343        353 NCGEDCGWQRGETCHACQEILFHS--------------------------------------IQQGHYDFPEGEWSTISD  394 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------i~~~~~~~p~~~~~~~s~  394 (539)
                      .+.......     ......+...                                      +....+.++    ..+++
T Consensus       238 ~~~~~~~~~-----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  308 (373)
T 1q8y_A          238 DEGHSYTKD-----DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFS----KDEAK  308 (373)
T ss_dssp             -------CH-----HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCC----HHHHH
T ss_pred             CcccccCCh-----HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCC----cchHH
Confidence            543211000     0000001100                                      001111122    13467


Q ss_pred             HHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        395 EAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       395 ~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ++++||.+||+.||.+|||++|+|+||||....
T Consensus       309 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            899999999999999999999999999998653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.8e-38  Score=326.28  Aligned_cols=266  Identities=19%  Similarity=0.234  Sum_probs=179.2

Q ss_pred             chhcccCceeceeCceEEEEEE-----EccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCV-----NILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~-----~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ .+.||+|+||.||+|.     +..++..||||++..... ....++.+|+.++..+ +|||||++++++.+...
T Consensus        71 ~~~~~-~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           71 KNITL-IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             GGEEE-EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSS
T ss_pred             hHeEE-eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCC
Confidence            44554 5789999999999999     556788999999964322 2334678899999997 69999999999876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|                       .+|.-+ +              .+...+..        ...... .....
T Consensus       149 ~~---lv-----------------------~e~~~~-g--------------~L~~~l~~--------~~~~~~-~~~~~  178 (367)
T 3l9p_A          149 RF---IL-----------------------LELMAG-G--------------DLKSFLRE--------TRPRPS-QPSSL  178 (367)
T ss_dssp             CE---EE-----------------------EECCTT-E--------------EHHHHHHH--------HSCCSS-SCCCC
T ss_pred             CE---EE-----------------------EEeCCC-C--------------CHHHHHHh--------hccccC-ccccc
Confidence            32   11                       111000 0              00000000        000000 00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      . ..+++.                        +..+   ++.++.|+|  ++||+||||||+|||+..++....+||+||
T Consensus       179 ~-~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~~~~~~~~~kL~DF  228 (367)
T 3l9p_A          179 A-MLDLLH------------------------VARD---IACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDF  228 (367)
T ss_dssp             C-HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             c-HHHHHH------------------------HHHH---HHHHHHHHH--hCCeeCCCCChhhEEEecCCCCceEEECCC
Confidence            0 000100                        2333   667788888  999999999999999976555556999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++.+......      ....+.+||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+     
T Consensus       229 G~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~ellt~g~~pf~~~~-----  291 (367)
T 3l9p_A          229 GMARDIYRAGYY------RKGGCAMLPVKWMPPEAFME------GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----  291 (367)
T ss_dssp             HHHHHHHHHSSC------TTCCGGGSCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----
T ss_pred             cccccccccccc------ccCCCcCCcccEECHHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----
Confidence            998744222111      01235678999999999864      468999999999999999998 999998753     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                ...+...+..+....+.   ..+++++.+||.+||..||.+|||++++++|.|..
T Consensus       292 ----------~~~~~~~i~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          292 ----------NQEVLEFVTSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             ----------HHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                      23455666655432222   36899999999999999999999999999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=3e-37  Score=317.60  Aligned_cols=146  Identities=23%  Similarity=0.361  Sum_probs=113.1

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++........      .......||+.|+|||++.. 
T Consensus       202 l~~aL~~LH--~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~-  269 (359)
T 3vhe_A          202 VAKGMEFLA--SRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFD-  269 (359)
T ss_dssp             HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTC------EEC--CEECGGGCCHHHHHH-
T ss_pred             HHHHHHHHH--HCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccc------hhccccCCCceeEChhhhcC-
Confidence            667788888  99999999999999994   4456999999998754322110      12235679999999999874 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAK  397 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~  397 (539)
                           ..|+.++|||||||++|+|++ |.+||.+....              +.+...+..+. ...|    ..+++++.
T Consensus       270 -----~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~----~~~~~~l~  326 (359)
T 3vhe_A          270 -----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP----DYTTPEMY  326 (359)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--------------HHHHHHHHHTCCCCCC----TTCCHHHH
T ss_pred             -----CCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--------------HHHHHHHHcCCCCCCC----CCCCHHHH
Confidence                 468999999999999999998 99999875422              22344444432 3333    35899999


Q ss_pred             HHHHHhccccccCCCCHHHHhcC
Q psy16343        398 DLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       398 dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      +||.+||..||.+|||++|+++|
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHH
Confidence            99999999999999999999987

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=329.83  Aligned_cols=257  Identities=23%  Similarity=0.278  Sum_probs=165.4

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecC
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDL  132 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDL  132 (539)
                      .++||+|+||.|+. ....+++.||||++.+..   ...+.+|+++|..+.+|||||++++++.+....+   .|     
T Consensus        29 ~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~---lv-----   96 (432)
T 3p23_A           29 KDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQY---IA-----   96 (432)
T ss_dssp             EEEEEECGGGCEEE-EEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEE---EE-----
T ss_pred             CCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEE---EE-----
Confidence            46899999998763 456789999999996432   2235689999999867999999999887654433   11     


Q ss_pred             CCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHH
Q psy16343        133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV  212 (539)
Q Consensus       133 K~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvi  212 (539)
                                        .++.-+                .+...+....               ... ...+++     
T Consensus        97 ------------------~E~~~g----------------~L~~~l~~~~---------------~~~-~~~~~~-----  121 (432)
T 3p23_A           97 ------------------IELCAA----------------TLQEYVEQKD---------------FAH-LGLEPI-----  121 (432)
T ss_dssp             ------------------EECCSE----------------EHHHHHHSSS---------------CCC-CSSCHH-----
T ss_pred             ------------------EECCCC----------------CHHHHHHhcC---------------CCc-cchhHH-----
Confidence                              111000                0000000000               000 000111     


Q ss_pred             HHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC--CCceeccCCCccccccCC
Q psy16343        213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL--SPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       213 l~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~--~~ikl~DFGla~~~~~~~  290 (539)
                                         .+..|   ++.++.|+|  ++||+||||||+|||+..++..  ..+||+|||+++......
T Consensus       122 -------------------~i~~q---i~~aL~~LH--~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~  177 (432)
T 3p23_A          122 -------------------TLLQQ---TTSGLAHLH--SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR  177 (432)
T ss_dssp             -------------------HHHHH---HHHHHHHHH--HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred             -------------------HHHHH---HHHHHHHHH--HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence                               13334   677888888  9999999999999999644322  346799999997654321


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ..     .....+.+||+.|+|||++...   ....++.++|||||||++|+|++ |.+||.....              
T Consensus       178 ~~-----~~~~~~~~gt~~y~APE~l~~~---~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--------------  235 (432)
T 3p23_A          178 HS-----FSRRSGVPGTEGWIAPEMLSED---CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--------------  235 (432)
T ss_dssp             -------------CCSCTTSCCGGGTSCC------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--------------
T ss_pred             cc-----eeeccccCCCcCccChhhhhcc---cccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--------------
Confidence            10     0123457899999999998631   12457789999999999999999 9999965421              


Q ss_pred             HHHHHHHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        370 QEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       370 ~~~~~~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                       ...  .+..+....+. ......+..+++||.+||..||.+|||++|+|+||||..
T Consensus       236 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          236 -RQA--NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             -HHH--HHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             -HHH--HHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence             111  11222222211 111234677999999999999999999999999999975

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=9e-37  Score=308.14  Aligned_cols=262  Identities=23%  Similarity=0.359  Sum_probs=174.7

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.+.|++ .+.||+|+||.||+|.+..+|+.||||++....  ....+.+|+.++..+ +||||+++++++.+....+
T Consensus        25 ~~~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           25 KQPEEVFDV-LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             -----CEEE-EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             hcchhhhhh-heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEE
Confidence            345666775 578999999999999999999999999996532  346788999999987 6999999999887643322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +                      +.++--+ +              .+...           +..    .....+ 
T Consensus       101 ----l----------------------v~e~~~~-~--------------~L~~~-----------~~~----~~~~~~-  123 (314)
T 3com_A          101 ----I----------------------VMEYCGA-G--------------SVSDI-----------IRL----RNKTLT-  123 (314)
T ss_dssp             ----E----------------------EEECCTT-E--------------EHHHH-----------HHH----HTCCCC-
T ss_pred             ----E----------------------EeecCCC-C--------------CHHHH-----------HHh----cCCCCC-
Confidence                1                      1111000 0              00000           000    000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       124 ~~~~~~------------------------i~~~---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~  171 (314)
T 3com_A          124 EDEIAT------------------------ILQS---TLKGLEYLH--FMRKIHRDIKAGNILLN---TEGHAKLADFGV  171 (314)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTCCEEECCCTT
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--hCCCcCCCcCHHHEEEC---CCCCEEEeeccc
Confidence            000110                        2233   667778888  99999999999999995   345699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +........        .....+||+.|+|||++..      ..|+.++|||||||++|+|++|..||.+...       
T Consensus       172 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------  230 (314)
T 3com_A          172 AGQLTDTMA--------KRNTVIGTPFWMAPEVIQE------IGYNCVADIWSLGITAIEMAEGKPPYADIHP-------  230 (314)
T ss_dssp             CEECBTTBS--------CBCCCCSCGGGCCHHHHSS------SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-------
T ss_pred             chhhhhhcc--------ccCccCCCCCccChhhcCC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCh-------
Confidence            875432211        1235689999999999863      4688999999999999999999999976431       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                             ..............+..  ...+++++++||.+||..||.+|||++++++||||....
T Consensus       231 -------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          231 -------MRAIFMIPTNPPPTFRK--PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             -------HHHHHHHHHSCCCCCSS--GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             -------HHHHHHHhcCCCcccCC--cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence                   11122222222222221  235789999999999999999999999999999998643

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=4.2e-37  Score=318.84  Aligned_cols=265  Identities=23%  Similarity=0.309  Sum_probs=174.8

Q ss_pred             chhcccCceeceeCceEEEEEEEc-------cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI-------LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~-------~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      +.|++ ++.||+|+||.||+|.+.       .++..||||+++.... .....+.+|++++..+.+|||||++++++.+.
T Consensus        81 ~~~~~-~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           81 DKLTL-GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGEEE-EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHCEe-eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            45555 578999999999999875       3456799999965322 22456889999999986799999999999765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccc---cccccCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI---VNAFMGP  195 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~---~~~~~~~  195 (539)
                      ...+   .|                       .+|--+ +              .+...+....-...+.   ...+.  
T Consensus       160 ~~~~---lv-----------------------~e~~~~-g--------------~L~~~l~~~~~~~~~~~~~~~~~~--  196 (370)
T 2psq_A          160 GPLY---VI-----------------------VEYASK-G--------------NLREYLRARRPPGMEYSYDINRVP--  196 (370)
T ss_dssp             SSCE---EE-----------------------EECCTT-C--------------BHHHHHHHTCCC-----------C--
T ss_pred             CCEE---EE-----------------------EEcCCC-C--------------CHHHHHHhhCCccccccccccccc--
Confidence            5433   11                       111000 0              0000000000000000   00000  


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                       ..       .+++..++.                  +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+
T Consensus       197 -~~-------~~~~~~~~~------------------i~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~~~~  242 (370)
T 2psq_A          197 -EE-------QMTFKDLVS------------------CTYQ---LARGMEYLA--SQKCIHRDLAARNVLVT---ENNVM  242 (370)
T ss_dssp             -CC-------CCCHHHHHH------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEEC---TTCCE
T ss_pred             -cc-------cCCHHHHHH------------------HHHH---HHHHHHHHH--hCCeeccccchhhEEEC---CCCCE
Confidence             00       000100100                  2233   677888888  99999999999999994   44679


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNC  354 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~  354 (539)
                      ||+|||+++........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+
T Consensus       243 kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          243 KIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             EECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHT------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEccccCCcccCcccce------ecccCCCcccceECHhHhcC------CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            99999998754322111      11234568899999999863      468999999999999999999 999998754


Q ss_pred             CCCCCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        355 GEDCGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      .               ..++..+..+. ...|    ..+++++.+||.+||..||.+|||+.|++++
T Consensus       311 ~---------------~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          311 V---------------EELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             G---------------GGHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             H---------------HHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2               22445555543 2233    3689999999999999999999999999865

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.1e-36  Score=308.90  Aligned_cols=272  Identities=19%  Similarity=0.289  Sum_probs=160.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCc---EEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTEL---EYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .+.|++ .+.||+|+||.||+|.+..++.   .||||++....  ......+.+|++++..+ +||||+++++++.+...
T Consensus        22 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           22 EQQFTL-GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             ---CEE-EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC--
T ss_pred             hhHeEE-eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeecccc
Confidence            344655 5789999999999999877765   89999996532  23346788999999987 69999999999876543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ....         ..-+           -+.++.-+ +              .+...+..         .... ......
T Consensus       100 ~~~~---------~~~~-----------~v~e~~~~-~--------------~L~~~l~~---------~~~~-~~~~~~  134 (323)
T 3qup_A          100 KGRL---------PIPM-----------VILPFMKH-G--------------DLHAFLLA---------SRIG-ENPFNL  134 (323)
T ss_dssp             --------------CEE-----------EEEECCTT-C--------------BHHHHHHH---------HHC----CCCC
T ss_pred             ccCC---------CccE-----------EEEEeccC-C--------------cHHHHHHh---------hhcc-cccccc
Confidence            2100         0000           11111100 0              00000000         0000 000000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...+|                        .+..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       135 ~-~~~~~------------------------~i~~q---i~~al~~LH--~~~ivH~Dikp~NIli~---~~~~~kl~Df  181 (323)
T 3qup_A          135 P-LQTLV------------------------RFMVD---IACGMEYLS--SRNFIHRDLAARNCMLA---EDMTVCVADF  181 (323)
T ss_dssp             C-HHHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTSCEEECCC
T ss_pred             C-HHHHH------------------------HHHHH---HHHHHHHHH--cCCcccCCCCcceEEEc---CCCCEEEeec
Confidence            0 00000                        03334   667788888  99999999999999994   4467999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++.........      ......||+.|+|||++.+      ..|+.++|||||||++|+|++ |.+||.+.+..   
T Consensus       182 g~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---  246 (323)
T 3qup_A          182 GLSRKIYSGDYYR------QGCASKLPVKWLALESLAD------NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---  246 (323)
T ss_dssp             CC-----------------------CCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---
T ss_pred             ccccccccccccc------ccccccCcccccCchhhcC------CCCCCccchhhHHHHHHHHHhCCCCCccccChH---
Confidence            9987543322110      1123457889999999874      468999999999999999999 99999875422   


Q ss_pred             cccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCC-------HHHHhcCCCccCCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-------AASVLKHPWISTAGT  428 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-------a~e~l~Hpw~~~~~~  428 (539)
                                  .+...+..+. ...+    ..+++++++||.+||..||.+|||       .++++.|||+.....
T Consensus       247 ------------~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~  307 (323)
T 3qup_A          247 ------------EIYNYLIGGNRLKQP----PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ  307 (323)
T ss_dssp             ------------GHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred             ------------HHHHHHhcCCCCCCC----CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence                        2444444443 3333    368999999999999999999999       677889999986543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.5e-36  Score=306.92  Aligned_cols=255  Identities=22%  Similarity=0.321  Sum_probs=166.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||.||+|.+  ++..||||++.+....  ....+.+|++++.++ +||||+++++++.+....+  
T Consensus        37 ~~y~i-~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~--  110 (309)
T 3p86_A           37 CDLNI-KEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLS--  110 (309)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCE--
T ss_pred             hHcee-eeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceE--
Confidence            44555 57899999999999975  6889999999654322  234678999999997 5999999999997654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                      +.+|--+ +              .+...+.....     ...        .+ ..
T Consensus       111 --l----------------------v~e~~~~-~--------------~L~~~l~~~~~-----~~~--------~~-~~  137 (309)
T 3p86_A          111 --I----------------------VTEYLSR-G--------------SLYRLLHKSGA-----REQ--------LD-ER  137 (309)
T ss_dssp             --E----------------------EEECCTT-C--------------BHHHHHHSTTH-----HHH--------SC-HH
T ss_pred             --E----------------------EEecCCC-C--------------cHHHHHhhcCC-----CCC--------CC-HH
Confidence              1                      1111000 0              00000000000     000        00 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      .+|.                        +..+   ++.++.|+|  ++|  |+||||||+|||+.   ..+.+||+|||+
T Consensus       138 ~~~~------------------------i~~q---i~~aL~~LH--~~~~~ivH~Dikp~NIll~---~~~~~kL~Dfg~  185 (309)
T 3p86_A          138 RRLS------------------------MAYD---VAKGMNYLH--NRNPPIVHRNLKSPNLLVD---KKYTVKVCDFGL  185 (309)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--TSSSCCCCTTCCGGGEEEC---TTCCEEECCCC-
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--cCCCCEECCCCChhhEEEe---CCCcEEECCCCC
Confidence            0000                        2333   677888888  889  99999999999994   445799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.......        ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+.+.       
T Consensus       186 a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~Pf~~~~~-------  244 (309)
T 3p86_A          186 SRLKASTFL--------SSKSAAGTPEWMAPEVLRD------EPSNEKSDVYSFGVILWELATLQQPWGNLNP-------  244 (309)
T ss_dssp             ------------------------CCTTSCHHHHTT------CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH-------
T ss_pred             Ccccccccc--------ccccCCCCccccChhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------
Confidence            874322111        1235689999999999863      4688999999999999999999999976531       


Q ss_pred             CccchhhHHHHHHHHh--cCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc--CCCccC
Q psy16343        363 GETCHACQEILFHSIQ--QGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK--HPWIST  425 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~--~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~--Hpw~~~  425 (539)
                              ......+.  .....+|    ..+++++++||.+||..||.+|||++|+++  ++|+..
T Consensus       245 --------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          245 --------AQVVAAVGFKCKRLEIP----RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             --------HHHHHHHHHSCCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             --------HHHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                    22333332  2333444    368999999999999999999999999987  566654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.6e-37  Score=316.40  Aligned_cols=266  Identities=17%  Similarity=0.182  Sum_probs=176.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.....  ...+.+|++++..+.+||||+++++++.++...+  
T Consensus         7 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~--   81 (330)
T 2izr_A            7 VGPNFRV-GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA--   81 (330)
T ss_dssp             ETTTEEE-EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE--
T ss_pred             EcCCeEE-EEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE--
Confidence            3456665 5789999999999999999999999999865332  3457899999999867999999999987754322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .++. + +              .+...           +...    ....    
T Consensus        82 -lv-----------------------~e~~-~-~--------------~L~~~-----------~~~~----~~~~----  102 (330)
T 2izr_A           82 -MV-----------------------LELL-G-P--------------SLEDL-----------FDLC----DRTF----  102 (330)
T ss_dssp             -EE-----------------------EECC-C-C--------------BHHHH-----------HHHT----TTCC----
T ss_pred             -EE-----------------------EEeC-C-C--------------CHHHH-----------HHHc----CCCC----
Confidence             11                       1111 0 0              00000           0000    0000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC--CCCceeccCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ--LSPVKLCDFDL  282 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~--~~~ikl~DFGl  282 (539)
                         +...++                  .+..+   ++.++.|+|  ++||+||||||+|||+..++.  ...+||+|||+
T Consensus       103 ---~~~~~~------------------~i~~q---i~~~l~~LH--~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A          103 ---SLKTVL------------------MIAIQ---LISRMEYVH--SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             ---CHHHHH------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             ---CHHHHH------------------HHHHH---HHHHHHHHH--hCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence               000000                  02333   667788888  999999999999999954322  12299999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......... ........+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+     
T Consensus       157 a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~-----  224 (330)
T 2izr_A          157 AKEYIDPETKK-HIPYREHKSLTGTARYMSINTHLG------KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT-----  224 (330)
T ss_dssp             CEESBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS-----
T ss_pred             ceeeecCCCCc-cccccccCCcCCCccccChHHHcC------CCCCchhHHHHHHHHHHHHhcCCCCcccccccc-----
Confidence            97543322110 000011246799999999999863      468999999999999999999999998764322     


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ....+..+.......+...+....+++++||.+||..||.+||+++++++
T Consensus       225 -------~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          225 -------LKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -------HHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------HHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                   22344445444333332211122349999999999999999999988775

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=7.9e-38  Score=313.68  Aligned_cols=276  Identities=25%  Similarity=0.382  Sum_probs=158.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|++ .+.||+|+||.||+|.+..+++.||||++.... ......+.+|++++..+ +||||+++++++......+  
T Consensus        14 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~--   89 (303)
T 2vwi_A           14 RDDYEL-QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELW--   89 (303)
T ss_dssp             CCCCEE-EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEE--
T ss_pred             hhhhhh-hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcE--
Confidence            445665 578999999999999999999999999986432 22345677899988886 5999999999987654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                      +.++--+ +              .+...+..       .... ........+ ..
T Consensus        90 --l----------------------v~e~~~~-~--------------~L~~~l~~-------~~~~-~~~~~~~~~-~~  121 (303)
T 2vwi_A           90 --L----------------------VMKLLSG-G--------------SVLDIIKH-------IVAK-GEHKSGVLD-ES  121 (303)
T ss_dssp             --E----------------------EEECCTT-C--------------BHHHHHHH-------HHHT-TTTTTCSSC-HH
T ss_pred             --E----------------------EehhccC-C--------------chHHHHHH-------Hhhc-cccccCCCC-HH
Confidence              1                      1111000 0              00000000       0000 000000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       122 ~~~~------------------------i~~q---i~~~l~~lH--~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  169 (303)
T 2vwi_A          122 TIAT------------------------ILRE---VLEGLEYLH--KNGQIHRDVKAGNILLG---EDGSVQIADFGVSA  169 (303)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCSGGGEEEC---TTCCEEECCCHHHH
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--hCCCCCCCCChhhEEEc---CCCCEEEEeccchh
Confidence            0100                        2333   667788888  99999999999999994   44569999999986


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .........   ........+||+.|+|||++..     ...|+.++|||||||++|+|++|..||.+....        
T Consensus       170 ~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------  233 (303)
T 2vwi_A          170 FLATGGDIT---RNKVRKTFVGTPCWMAPEVMEQ-----VRGYDFKADIWSFGITAIELATGAAPYHKYPPM--------  233 (303)
T ss_dssp             HCC------------------CCCTTCCHHHHHH-----HHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------
T ss_pred             eeccCCCcc---chhhhcccCCCccccCHHHhcc-----ccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--------
Confidence            543221100   0111235689999999999863     135888999999999999999999999865321        


Q ss_pred             cchhhHHHHHHHHhcCCCCCC-----CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFP-----EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p-----~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                            ......+......++     ...+..++.++++||.+||..||.+|||++|+++||||....
T Consensus       234 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          234 ------KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             ------GHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             ------hHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence                  112222222222111     122356899999999999999999999999999999997643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=7.7e-37  Score=308.83  Aligned_cols=263  Identities=25%  Similarity=0.416  Sum_probs=172.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcC-CCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQG-HPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~-HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+. +++.||||++.....  .....+.+|++++.++.+ ||||+++++++.+....+ 
T Consensus        28 ~~y~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~-  104 (313)
T 3cek_A           28 RIYSI-LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY-  104 (313)
T ss_dssp             EEEEE-EEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE-
T ss_pred             ceEEE-EEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE-
Confidence            44665 478999999999999875 588999999964332  234567899999999864 799999999987654332 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|                 +  ..+              .+...+...                .    .
T Consensus       105 --lv------~e-----------------~--~~~--------------~L~~~l~~~----------------~----~  123 (313)
T 3cek_A          105 --MV------ME-----------------C--GNI--------------DLNSWLKKK----------------K----S  123 (313)
T ss_dssp             --EE------EC-----------------C--CSE--------------EHHHHHHHC----------------S----S
T ss_pred             --EE------Ee-----------------c--CCC--------------cHHHHHHhc----------------C----C
Confidence              11      11                 0  000              000000000                0    0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .+.+..-.                     +..+   ++.++.|+|  ++||+||||||+|||+.+    +.+||+|||++
T Consensus       124 ~~~~~~~~---------------------i~~q---i~~aL~~LH--~~~ivH~dlkp~NIl~~~----~~~kL~Dfg~~  173 (313)
T 3cek_A          124 IDPWERKS---------------------YWKN---MLEAVHTIH--QHGIVHSDLKPANFLIVD----GMLKLIDFGIA  173 (313)
T ss_dssp             CCHHHHHH---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEET----TEEEECCCSSS
T ss_pred             CCHHHHHH---------------------HHHH---HHHHHHHHH--HCCceecCCCcccEEEEC----CeEEEeecccc
Confidence            01111111                     2233   667788888  999999999999999942    56999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCC-----CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG-----PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~-----~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      +........      ......+||+.|+|||++.....     .....|+.++|||||||++|+|++|..||.+...   
T Consensus       174 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---  244 (313)
T 3cek_A          174 NQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---  244 (313)
T ss_dssp             CC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS---
T ss_pred             ccccCcccc------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH---
Confidence            765332210      01235689999999999863110     0013588899999999999999999999975421   


Q ss_pred             CcccCccchhhHHHHHHHHhcCCC--CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHY--DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                                 .......+.....  .+|    ...+.++++||.+||..||.+||+++|+|+||||....
T Consensus       245 -----------~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          245 -----------QISKLHAIIDPNHEIEFP----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             -----------HHHHHHHHHCTTSCCCCC----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             -----------HHHHHHHHHhcccccCCc----ccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence                       1122333333322  333    24688999999999999999999999999999998643

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2e-36  Score=305.84  Aligned_cols=262  Identities=22%  Similarity=0.292  Sum_probs=161.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      .|++ .+.||+|+||.||+|.+..+|+.||||++...... ...+...|+..+.+..+||||+++++++.+....+   .
T Consensus        26 ~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~---l  101 (318)
T 2dyl_A           26 DLEN-LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF---I  101 (318)
T ss_dssp             GEEE-EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE---E
T ss_pred             cccc-cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE---E
Confidence            4554 46899999999999999999999999999654321 22344455554444457999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+                  +....            .+.....  ..++.+                 .+
T Consensus       102 v------~e~~------------------~~~~~------------~l~~~~~--~~~~~~-----------------~~  126 (318)
T 2dyl_A          102 A------MELM------------------GTCAE------------KLKKRMQ--GPIPER-----------------IL  126 (318)
T ss_dssp             E------ECCC------------------SEEHH------------HHHHHHT--SCCCHH-----------------HH
T ss_pred             E------Eecc------------------CCcHH------------HHHHHhc--cCCCHH-----------------HH
Confidence            1      1110                  00000            0000000  000000                 00


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh-CCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~-gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      |.                        +..+   ++.++.|+|  ++ ||+||||||+|||+.   ..+.+||+|||++..
T Consensus       127 ~~------------------------~~~~---i~~~l~~lH--~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A          127 GK------------------------MTVA---IVKALYYLK--EKHGVIHRDVKPSNILLD---ERGQIKLCDFGISGR  174 (318)
T ss_dssp             HH------------------------HHHH---HHHHHHHHH--HHHCCCCCCCCGGGEEEC---TTSCEEECCCTTC--
T ss_pred             HH------------------------HHHH---HHHHHHHHH--hhCCEEeCCCCHHHEEEC---CCCCEEEEECCCchh
Confidence            00                        2233   667778888  75 999999999999994   445699999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .....         .....+||+.|+|||++..... ....|+.++|||||||++|+|++|..||.+...          
T Consensus       175 ~~~~~---------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------  234 (318)
T 2dyl_A          175 LVDDK---------AKDRSAGCAAYMAPERIDPPDP-TKPDYDIRADVWSLGISLVELATGQFPYKNCKT----------  234 (318)
T ss_dssp             ---------------------CCTTCCHHHHC---------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----------
T ss_pred             ccCCc---------cccccCCCccccChhhcccccc-cccCCccccchhhHHHHHHHHHhCCCCCCCCCc----------
Confidence            43221         1234689999999999853110 124588899999999999999999999976321          


Q ss_pred             chhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        366 CHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                          .......+..+.. .+|.  +..+++++++||.+||..||.+||+++|+++||||...
T Consensus       235 ----~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          235 ----DFEVLTKVLQEEPPLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             ----HHHHHHHHHHSCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             ----cHHHHHHHhccCCCCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence                1223444444433 3332  34689999999999999999999999999999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.2e-37  Score=302.62  Aligned_cols=261  Identities=27%  Similarity=0.381  Sum_probs=178.8

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||+|++.....  .....+.+|++++..+ +||||+++++++.+.....  
T Consensus         6 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~--   81 (279)
T 2w5a_A            6 EDYEV-LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTT--   81 (279)
T ss_dssp             GGEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTE--
T ss_pred             hheee-ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCce--
Confidence            45665 4789999999999999999999999999965332  2345678999999997 5999999999874322110  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                  +.          -+.++.-+ +              .+...           +.... ......+ ..
T Consensus        82 ------------~~----------lv~e~~~~-~--------------~L~~~-----------l~~~~-~~~~~~~-~~  111 (279)
T 2w5a_A           82 ------------LY----------IVMEYCEG-G--------------DLASV-----------ITKGT-KERQYLD-EE  111 (279)
T ss_dssp             ------------EE----------EEEECCTT-E--------------EHHHH-----------HHHHH-HTTCCCC-HH
T ss_pred             ------------EE----------EEEeCCCC-C--------------CHHHH-----------HHhhc-ccCCCCC-HH
Confidence                        00          01111000 0              00000           00000 0000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC-----CCCCCCCCCceeecCCCCCCCceecc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG-----IAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g-----IvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      .+|.                        +..+   ++.++.|+|  ++|     |+||||||+|||+.   ..+.+||+|
T Consensus       112 ~~~~------------------------i~~~---i~~~l~~lH--~~~~~~~~ivH~dl~p~NIl~~---~~~~~kl~d  159 (279)
T 2w5a_A          112 FVLR------------------------VMTQ---LTLALKECH--RRSDGGHTVLHRDLKPANVFLD---GKQNVKLGD  159 (279)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HHC------CCCCCSGGGEEEC---SSSCEEECC
T ss_pred             HHHH------------------------HHHH---HHHHHHHHh--cccCCCCeeEEeccchhhEEEc---CCCCEEEec
Confidence            1111                        2333   667778888  888     99999999999994   445699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+++.......        .....+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.+.+     
T Consensus       160 fg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----  220 (279)
T 2w5a_A          160 FGLARILNHDTS--------FAKTFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFS-----  220 (279)
T ss_dssp             CCHHHHC---CH--------HHHHHHSCCTTCCHHHHHC------C-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----
T ss_pred             Cchheeeccccc--------cccccCCCccccChHHhcc------CCCCchhhHHHHHHHHHHHHHCCCCCcccC-----
Confidence            999875432211        1234689999999999863      468899999999999999999999997643     


Q ss_pred             cccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                ...+...+..+.+ .+|    ..+++++++||.+||..||.+|||++|+++|||+...
T Consensus       221 ----------~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          221 ----------QKELAGKIREGKFRRIP----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             ----------HHHHHHHHHHTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             ----------HHHHHHHHhhcccccCC----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence                      2335566666654 233    3579999999999999999999999999999999754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=4.9e-37  Score=308.51  Aligned_cols=251  Identities=32%  Similarity=0.597  Sum_probs=172.4

Q ss_pred             cccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc-
Q psy16343         40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD-  118 (539)
Q Consensus        40 ~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~-  118 (539)
                      .....+-+.|++.+++||+|+||.||+|.+..+++.||||+++.     .....+|++++.+..+||||+++++++.+. 
T Consensus        10 ~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~   84 (299)
T 3m2w_A           10 IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY   84 (299)
T ss_dssp             CBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             CcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhc
Confidence            34556777788766889999999999999999999999999964     246778999987777899999999988651 


Q ss_pred             ---ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        119 ---ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       119 ---~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                         ...+    +                      +.++.-+ +              .+...           +...   
T Consensus        85 ~~~~~~~----l----------------------v~e~~~~-~--------------~L~~~-----------l~~~---  109 (299)
T 3m2w_A           85 AGRKCLL----I----------------------VMECLDG-G--------------ELFSR-----------IQDR---  109 (299)
T ss_dssp             TTEEEEE----E----------------------EECCCCS-C--------------BHHHH-----------HHHC---
T ss_pred             CCCceEE----E----------------------EEeecCC-C--------------cHHHH-----------HHhc---
Confidence               1111    1                      1111000 0              00000           0000   


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                      .....+ ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+...+..+.+
T Consensus       110 ~~~~~~-~~~~~~------------------------i~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~~~~~~~~~  159 (299)
T 3m2w_A          110 GDQAFT-EREASE------------------------IMKS---IGEAIQYLH--SINIAHRDVKPENLLYTSKRPNAIL  159 (299)
T ss_dssp             TTCCCB-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEESSSSTTCCE
T ss_pred             cCCCCC-HHHHHH------------------------HHHH---HHHHHHHHH--hCCcccCCCCHHHEEEecCCCCCcE
Confidence            000000 000110                        2333   667788888  9999999999999999765446779


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||++....                                    ...|+.++|||||||++|+|++|.+||.+...
T Consensus       160 kl~Dfg~a~~~~------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  203 (299)
T 3m2w_A          160 KLTDFGFAKETT------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  203 (299)
T ss_dssp             EECCCTTCEECT------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred             EEeccccccccc------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence            999999875321                                    12467789999999999999999999987543


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ......           +...+..+.+.+|...|..+++++++||.+||..||.+|||++|+|+||||....
T Consensus       204 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          204 LAISPG-----------MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             ----CC-----------SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             hhhhHH-----------HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            221000           1112334455566555678999999999999999999999999999999998654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=4.6e-36  Score=299.01  Aligned_cols=254  Identities=20%  Similarity=0.255  Sum_probs=172.3

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC-------HHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-------RSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~-------~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      .+.|++ .+.||+|+||.||+|.+..+++.||||++.......       ...+.+|++++.++ +||||+++++++.+.
T Consensus        18 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           18 DNEIEY-EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNP   95 (287)
T ss_dssp             STTEEE-EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTT
T ss_pred             hcccee-hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCC
Confidence            455665 578999999999999999999999999986433211       15688999999987 599999999998654


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ..                ++            .+|.-+ +              .+...+..               ...
T Consensus        96 ~~----------------lv------------~e~~~~-~--------------~L~~~l~~---------------~~~  117 (287)
T 4f0f_A           96 PR----------------MV------------MEFVPC-G--------------DLYHRLLD---------------KAH  117 (287)
T ss_dssp             TE----------------EE------------EECCTT-C--------------BHHHHHHC---------------TTS
T ss_pred             Ce----------------EE------------EEecCC-C--------------CHHHHHhc---------------ccC
Confidence            31                11            111000 0              00000000               000


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCC--CCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQ--LSP  274 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~--~~~  274 (539)
                      ..+ ...+|.                        +..+   ++.++.|+|  ++|  |+||||||+|||+...+.  ...
T Consensus       118 ~~~-~~~~~~------------------------~~~~---l~~~l~~lH--~~~~~ivH~dikp~Nil~~~~~~~~~~~  167 (287)
T 4f0f_A          118 PIK-WSVKLR------------------------LMLD---IALGIEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVC  167 (287)
T ss_dssp             CCC-HHHHHH------------------------HHHH---HHHHHHHHH--TSSSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred             Ccc-HHHHHH------------------------HHHH---HHHHHHHHH--hCCCCeecCCCCcceEEEeccCCCCcee
Confidence            000 000000                        2333   667788888  888  999999999999965332  123


Q ss_pred             ceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        275 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  354 (539)
Q Consensus       275 ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~  354 (539)
                      +||+|||+++....           .....+||+.|+|||++..    ....|+.++|||||||++|+|++|..||.+..
T Consensus       168 ~kl~Dfg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~----~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          168 AKVADFGLSQQSVH-----------SVSGLLGNFQWMAPETIGA----EEESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             EEECCCTTCBCCSS-----------CEECCCCCCTTSCGGGSSC----SSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             EEeCCCCccccccc-----------cccccCCCccccCchhhcc----CCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            89999999874321           1235689999999999842    12457889999999999999999999997654


Q ss_pred             CCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ..             .......+.......  .....+++++++||.+||..||.+|||++|+++
T Consensus       233 ~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          233 YG-------------KIKFINMIREEGLRP--TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CC-------------HHHHHHHHHHSCCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cc-------------HHHHHHHHhccCCCC--CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            22             112233333332222  122468999999999999999999999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7e-36  Score=310.86  Aligned_cols=269  Identities=24%  Similarity=0.290  Sum_probs=176.9

Q ss_pred             cchhcccCceeceeCceEEEEEEEccC-------CcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILT-------ELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t-------~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      .+.|.+ ++.||+|+||.||+|.+..+       +..||||++..... ....++.+|++++..+.+|||||++++++.+
T Consensus        68 ~~~y~i-~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           68 RDRLVL-GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             GGGEEE-EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhheEe-eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            345665 57899999999999997643       35799999965422 2235688999999998679999999999977


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|      +|.+-    +.    -|.+     .+......       .     ....|...  ..     ..
T Consensus       147 ~~~~~---lv------~e~~~----~g----~L~~-----~l~~~~~~-------~-----~~~~~~~~--~~-----~~  185 (382)
T 3tt0_A          147 DGPLY---VI------VEYAS----KG----NLRE-----YLQARRPP-------G-----LEYSYNPS--HN-----PE  185 (382)
T ss_dssp             SSSCE---EE------EECCT----TC----BHHH-----HHHHTCCS-------S-----SSSCCCCC--SS-----CC
T ss_pred             CCceE---EE------EEecC----CC----cHHH-----HHHHhccc-------c-----cccccccc--cc-----cc
Confidence            65432   11      11100    00    0000     00000000       0     00000000  00     00


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      ...+ ..+++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||
T Consensus       186 ~~l~-~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~~~kL  232 (382)
T 3tt0_A          186 EQLS-SKDLVS------------------------CAYQ---VARGMEYLA--SKKCIHRDLAARNVLVT---EDNVMKI  232 (382)
T ss_dssp             CCCC-HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEE
T ss_pred             cccC-HHHHHH------------------------HHHH---HHHHHHHHH--hCCEecCCCCcceEEEc---CCCcEEE
Confidence            0000 000110                        2333   677788888  99999999999999994   4457999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGE  356 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~  356 (539)
                      +|||+++........      .......||+.|+|||++.+      ..|+.++|||||||++|+|++ |..||.+.+  
T Consensus       233 ~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~ellt~g~~p~~~~~--  298 (382)
T 3tt0_A          233 ADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--  298 (382)
T ss_dssp             CSCSCCCCSSCCCTT------CCCTTCCCGGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred             cccCccccccccccc------ccccCCCCCcceeCHHHhcC------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence            999999755332211      11234578999999999863      468999999999999999999 999998653  


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                   ...+...+..+. ...|    ..+++++++||.+||..||++|||++|+++|
T Consensus       299 -------------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          299 -------------VEELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             -------------HHHHHHHHHTTCCCCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------HHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                         234555665553 2233    4689999999999999999999999999976

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-36  Score=304.73  Aligned_cols=284  Identities=23%  Similarity=0.293  Sum_probs=164.2

Q ss_pred             CCCcccccccCCCcchHHHHHHHHHHhhhcccccccccccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC
Q psy16343          5 GDSFHHSVPVATSKSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL   84 (539)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~   84 (539)
                      |.|+++..|++...+....+......+          ....-+.|++ .+.||+|+||.||+|.+..+++.||||++.+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~   70 (309)
T 2h34_A            2 GSSHHHHHHSSGLVPRGSHMDGTAESR----------EGTQFGPYRL-RRLVGRGGMGDVYEAEDTVRERIVALKLMSET   70 (309)
T ss_dssp             ------------------------------------------CCEEE-EEEEEECSSSEEEEEEETTTTEEEEEEECGGG
T ss_pred             CccccccccccCcccCCcccccccccC----------CCcEeccEEE-EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcc
Confidence            556666667766555554443322111          1223345665 57899999999999999999999999999653


Q ss_pred             CCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcC
Q psy16343         85 PGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  161 (539)
Q Consensus        85 ~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~  161 (539)
                      ...   ....+.+|+.++..+ +||||+++++++.+....+   .|                       .++.-+ +   
T Consensus        71 ~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~---lv-----------------------~e~~~~-~---  119 (309)
T 2h34_A           71 LSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLY---VD-----------------------MRLING-V---  119 (309)
T ss_dssp             GGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE---EE-----------------------EECCCC-E---
T ss_pred             cccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEE---EE-----------------------EEecCC-C---
Confidence            222   235678899999987 5999999999987654322   11                       111000 0   


Q ss_pred             CCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccch
Q psy16343        162 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  241 (539)
Q Consensus       162 ~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~  241 (539)
                                 .+...+.....+.++                 .++.                        +..+   ++
T Consensus       120 -----------~L~~~l~~~~~~~~~-----------------~~~~------------------------i~~q---i~  144 (309)
T 2h34_A          120 -----------DLAAMLRRQGPLAPP-----------------RAVA------------------------IVRQ---IG  144 (309)
T ss_dssp             -----------EHHHHHHHHCSCCHH-----------------HHHH------------------------HHHH---HH
T ss_pred             -----------CHHHHHHhcCCCCHH-----------------HHHH------------------------HHHH---HH
Confidence                       000000000000000                 0100                        2333   66


Q ss_pred             hhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCC
Q psy16343        242 CQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG  321 (539)
Q Consensus       242 ~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~  321 (539)
                      .++.|+|  ++||+||||||+|||+.   ..+.+||+|||++........       ......+||+.|+|||++..   
T Consensus       145 ~~l~~lH--~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~---  209 (309)
T 2h34_A          145 SALDAAH--AAGATHRDVKPENILVS---ADDFAYLVDFGIASATTDEKL-------TQLGNTVGTLYYMAPERFSE---  209 (309)
T ss_dssp             HHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECSCCC-----------------------CCGGGCCGGGTCC---
T ss_pred             HHHHHHH--HCcCCcCCCChHHEEEc---CCCCEEEecCccCcccccccc-------ccccccCCCcCccCHHHHcC---
Confidence            7788888  99999999999999995   345699999999875432211       11235689999999999863   


Q ss_pred             CCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHH
Q psy16343        322 PEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR  401 (539)
Q Consensus       322 ~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~  401 (539)
                         ..|+.++|||||||++|+|++|..||.+.+               ...+...+ ......+...+..+++++++||.
T Consensus       210 ---~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~  270 (309)
T 2h34_A          210 ---SHATYRADIYALTCVLYECLTGSPPYQGDQ---------------LSVMGAHI-NQAIPRPSTVRPGIPVAFDAVIA  270 (309)
T ss_dssp             -------CCCHHHHHHHHHHHHHHSSCSSCSCH---------------HHHHHHHH-HSCCCCGGGTSTTCCTHHHHHHH
T ss_pred             ---CCCCchHhHHHHHHHHHHHHHCCCCCCCch---------------HHHHHHHh-ccCCCCccccCCCCCHHHHHHHH
Confidence               468889999999999999999999997642               12222333 33333333344678999999999


Q ss_pred             HhccccccCCC-CHHHHhc
Q psy16343        402 RLLVKDARKRL-SAASVLK  419 (539)
Q Consensus       402 ~lL~~dP~~R~-ta~e~l~  419 (539)
                      +||..||.+|| +++++++
T Consensus       271 ~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          271 RGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHTCSSGGGSCSSHHHHHH
T ss_pred             HhccCCHHHHHHhHHHHHH
Confidence            99999999999 7777764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.7e-36  Score=303.51  Aligned_cols=266  Identities=15%  Similarity=0.188  Sum_probs=178.6

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.+..  ....+.+|+.++..+.+|+||+++++++.+....+  
T Consensus         8 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~--   82 (298)
T 1csn_A            8 VGVHYKV-GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV--   82 (298)
T ss_dssp             ETTTEEE-EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE--
T ss_pred             cccceEE-EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE--
Confidence            4556775 578999999999999999999999999986433  23457889999999878999999999886554322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .                       +.++. + +              .+...           +..    .....+ ..
T Consensus        83 -l-----------------------v~e~~-~-~--------------~L~~~-----------l~~----~~~~~~-~~  106 (298)
T 1csn_A           83 -L-----------------------VIDLL-G-P--------------SLEDL-----------LDL----CGRKFS-VK  106 (298)
T ss_dssp             -E-----------------------EEECC-C-C--------------BHHHH-----------HHH----TTTCCC-HH
T ss_pred             -E-----------------------EEEec-C-C--------------CHHHH-----------HHH----hccCCC-HH
Confidence             1                       11111 0 0              00000           000    000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC--CCCCceeccCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD--QLSPVKLCDFDL  282 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~--~~~~ikl~DFGl  282 (539)
                      +++                        .+..|   ++.++.|+|  ++||+||||||+|||+..++  ....+||+|||+
T Consensus       107 ~~~------------------------~i~~q---i~~~l~~lH--~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A          107 TVA------------------------MAAKQ---MLARVQSIH--EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             HHH------------------------HHHHH---HHHHHHHHH--TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             HHH------------------------HHHHH---HHHHHHHHH--hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            010                        03333   667788888  99999999999999996542  223499999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......... ..........+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+     
T Consensus       158 ~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----  225 (298)
T 1csn_A          158 VKFYRDPVTKQ-HIPYREKKNLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-----  225 (298)
T ss_dssp             CEESBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-----
T ss_pred             ccccccccccc-cccccCccCCCCCcccCCchhhcC------CCCChHHHHHHHHHHHHHHHcCCCCcchhhccc-----
Confidence            97554322110 000012346789999999999863      468999999999999999999999998754322     


Q ss_pred             CccchhhHHHHHHHHhcCCCCCC-CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p-~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ....+..+.......+ ...+..+++++++||.+||..||++||+++++++
T Consensus       226 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          226 -------NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             -------HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------cHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                   1223333332222111 1112468999999999999999999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=9.5e-37  Score=310.30  Aligned_cols=271  Identities=24%  Similarity=0.330  Sum_probs=157.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      ..|++ .++||+|+||.||+|.+..+++.||||++.+........+.+|+.++.++.+||||+++++++..+....... 
T Consensus        28 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~-  105 (337)
T 3ll6_A           28 LRLRV-RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG-  105 (337)
T ss_dssp             EEEEE-EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS-
T ss_pred             ceEEE-EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC-
Confidence            34665 5789999999999999999999999999865443345678899999999877999999999885432211000 


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                             ...+.          -+.++.-+                .+...           +.....  ....+ ...+
T Consensus       106 -------~~~~~----------lv~e~~~g----------------~L~~~-----------l~~~~~--~~~~~-~~~~  138 (337)
T 3ll6_A          106 -------QAEFL----------LLTELCKG----------------QLVEF-----------LKKMES--RGPLS-CDTV  138 (337)
T ss_dssp             -------SEEEE----------EEEECCSE----------------EHHHH-----------HHHHHT--TCSCC-HHHH
T ss_pred             -------CceEE----------EEEEecCC----------------CHHHH-----------HHHhhc--cCCCC-HHHH
Confidence                   00000          11111100                00000           000000  00000 0001


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      |                        .+..+   ++.++.|+|  ++|  |+||||||+|||+.   ..+.+||+|||++.
T Consensus       139 ~------------------------~i~~q---i~~~l~~LH--~~~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          139 L------------------------KIFYQ---TCRAVQHMH--RQKPPIIHRDLKVENLLLS---NQGTIKLCDFGSAT  186 (337)
T ss_dssp             H------------------------HHHHH---HHHHHHHHH--TSSSCCBCCCCCGGGCEEC---TTSCEEBCCCTTCB
T ss_pred             H------------------------HHHHH---HHHHHHHHH--hCCCCEEEccCCcccEEEC---CCCCEEEecCccce
Confidence            1                        02333   667788888  888  99999999999995   44569999999987


Q ss_pred             ccccCCCCCC----CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        285 GIKFNTSVHS----PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       285 ~~~~~~~~~~----~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      ..........    ........+.+||+.|+|||++...   ....|+.++|||||||++|+|++|..||.+....    
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----  259 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY---SNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----  259 (337)
T ss_dssp             CCSSCC-------------------------------CC---TTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhcc---ccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence            6543211000    0000112356899999999998421   1246888999999999999999999999754211    


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                                     .+..+.+.++.  ....+.++++||.+||..||.+|||++|+++|-+
T Consensus       260 ---------------~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          260 ---------------RIVNGKYSIPP--HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ---------------------CCCCT--TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ---------------HhhcCcccCCc--ccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence                           12223333333  2456788999999999999999999999998843

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.1e-36  Score=295.45  Aligned_cols=250  Identities=17%  Similarity=0.252  Sum_probs=173.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+. ++..||||++.+.. ....++.+|++++.++ +||||+++++++.+....+    
T Consensus        10 ~~y~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~----   81 (269)
T 4hcu_A           10 SELTF-VQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPIC----   81 (269)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEE----
T ss_pred             hhcee-eheecCCCccEEEEEEec-CCCeEEEEEecccc-cCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceE----
Confidence            34554 468999999999999986 56779999997533 3456789999999997 5999999999987654322    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      +.++--+ +              .+...+..               .....+ ...+
T Consensus        82 l----------------------v~e~~~~-~--------------~L~~~l~~---------------~~~~~~-~~~~  108 (269)
T 4hcu_A           82 L----------------------VFEFMEH-G--------------CLSDYLRT---------------QRGLFA-AETL  108 (269)
T ss_dssp             E----------------------EEECCTT-C--------------BHHHHHHT---------------TTTCCC-HHHH
T ss_pred             E----------------------EEEeCCC-C--------------cHHHHHHh---------------cCcccC-HHHH
Confidence            1                      1111000 0              00000000               000000 0001


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       109 ~~------------------------i~~~---i~~~l~~lH--~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A          109 LG------------------------MCLD---VCEGMAYLE--EACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFV  156 (269)
T ss_dssp             HH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---GGGCEEECCTTGGGGB
T ss_pred             HH------------------------HHHH---HHHHHHHHH--hCCeecCCcchheEEEc---CCCCEEeccccccccc
Confidence            00                        2233   667778888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......||+.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.+.+           
T Consensus       157 ~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----------  212 (269)
T 4hcu_A          157 LDDQYT-------SSTGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----------  212 (269)
T ss_dssp             CCHHHH-------STTSTTCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------
T ss_pred             cccccc-------cccCcccccccCCHHHhcC------CCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----------
Confidence            321110       1224567889999999963      468999999999999999999 999997653           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          ...+...+..+.....+   ..+++++++||.+||..||.+|||++|+++|
T Consensus       213 ----~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          213 ----NSEVVEDISTGFRLYKP---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             ----HHHHHHHHHTTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----HHHHHHHHhcCccCCCC---CcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                23355556555322222   3579999999999999999999999999976

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=7.9e-36  Score=294.62  Aligned_cols=248  Identities=29%  Similarity=0.411  Sum_probs=163.0

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC----CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG----HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~----~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .|++ .+.||+|+||.||+|.+  ++..||||++.....    .....+.+|++++..+ +||||+++++++.+....+ 
T Consensus         8 ~~~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~-   82 (271)
T 3dtc_A            8 ELTL-EEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLC-   82 (271)
T ss_dssp             SEEE-EEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CE-
T ss_pred             heee-eeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceE-
Confidence            3554 57899999999999986  488999999864322    2245688899999987 5999999999987654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         +                      +.++--+ +              .+...+.. ..+.++                
T Consensus        83 ---l----------------------v~e~~~~-~--------------~L~~~~~~-~~~~~~----------------  105 (271)
T 3dtc_A           83 ---L----------------------VMEFARG-G--------------PLNRVLSG-KRIPPD----------------  105 (271)
T ss_dssp             ---E----------------------EEECCTT-E--------------EHHHHHTS-SCCCHH----------------
T ss_pred             ---E----------------------EEEcCCC-C--------------CHHHHhhc-CCCCHH----------------
Confidence               1                      1111000 0              00000000 000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC---CCCCCCCCCceeecCCC-----CCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG---IAHRDLKPENILCVHPD-----QLSPV  275 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g---IvHRDlKpeNiL~~~~~-----~~~~i  275 (539)
                       .+|.                        +..+   ++.++.|+|  ++|   |+||||||+|||+....     ..+.+
T Consensus       106 -~~~~------------------------i~~~---l~~~l~~lH--~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~  155 (271)
T 3dtc_A          106 -ILVN------------------------WAVQ---IARGMNYLH--DEAIVPIIHRDLKSSNILILQKVENGDLSNKIL  155 (271)
T ss_dssp             -HHHH------------------------HHHH---HHHHHHHHH--HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred             -HHHH------------------------HHHH---HHHHHHHHH--hCCCCceeecCCchHHEEEecccccccccCcce
Confidence             0110                        2333   667788888  888   99999999999996532     14669


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||++.......          ....+||+.|+|||++.+      ..|+.++|+|||||++|+|++|.+||.+.+.
T Consensus       156 kl~Dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~  219 (271)
T 3dtc_A          156 KITDFGLAREWHRTT----------KMSAAGAYAWMAPEVIRA------SMFSKGSDVWSYGVLLWELLTGEVPFRGIDG  219 (271)
T ss_dssp             EECCCCC-----------------------CCGGGSCHHHHHH------CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH
T ss_pred             EEccCCccccccccc----------ccCCCCccceeCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999987543221          124589999999999874      4688999999999999999999999986531


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                     ......+.......+..  ..+++++++||.+||..||.+|||+.|+++|
T Consensus       220 ---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          220 ---------------LAVAYGVAMNKLALPIP--STCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             ---------------HHHHHHHHTSCCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------HHHHHhhhcCCCCCCCC--cccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                           22333444444333322  4689999999999999999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=3.4e-36  Score=306.07  Aligned_cols=250  Identities=21%  Similarity=0.300  Sum_probs=168.5

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcE----EEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELE----YAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~----vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.    ||+|++.... ......+.+|+.++..+ +||||+++++++++...+
T Consensus        13 ~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   90 (325)
T 3kex_A           13 TELRK-LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCPGSSLQ   90 (325)
T ss_dssp             TTEEE-EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEECBSSEE
T ss_pred             hHcee-eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCccE
Confidence            44554 57899999999999999888876    7777764322 22234567899999886 699999999988643221


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .    |                       .++--+ +              .+...+.. ...+.++             
T Consensus        91 ~----v-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~~-------------  115 (325)
T 3kex_A           91 L----V-----------------------TQYLPL-G--------------SLLDHVRQHRGALGPQ-------------  115 (325)
T ss_dssp             E----E-----------------------EECCTT-C--------------BSHHHHHSSGGGSCTT-------------
T ss_pred             E----E-----------------------EEeCCC-C--------------CHHHHHHHccccCCHH-------------
Confidence            1    1                       111000 0              00000000 0000000             


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                          .++                        .|..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       116 ----~~~------------------------~~~~q---i~~~l~~lH--~~~ivH~Dikp~Nil~~---~~~~~kl~Df  159 (325)
T 3kex_A          116 ----LLL------------------------NWGVQ---IAKGMYYLE--EHGMVHRNLAARNVLLK---SPSQVQVADF  159 (325)
T ss_dssp             ----HHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCSSTTEEES---SSSCEEECSC
T ss_pred             ----HHH------------------------HHHHH---HHHHHHHHH--hCCCCCCccchheEEEC---CCCeEEECCC
Confidence                000                        02334   667788888  99999999999999994   4456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+....   
T Consensus       160 g~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---  224 (325)
T 3kex_A          160 GVADLLPPDDKQ------LLYSEAKTPIKWMALESIHF------GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA---  224 (325)
T ss_dssp             SGGGGSCCCTTC------CC-----CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT---
T ss_pred             CcccccCccccc------ccccCCCCcccccChHHhcc------CCCChhhHhHHhHHHHHHHHhCCCCCccccCHH---
Confidence            999865432211      11235578889999999974      468999999999999999999 99999875422   


Q ss_pred             cccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        360 WQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  .+...+..+. ...|    ..++.++.+||.+||..||.+|||+.|+++|
T Consensus       225 ------------~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          225 ------------EVPDLLEKGERLAQP----QICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             ------------HHHHHHHTTCBCCCC----TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             ------------HHHHHHHcCCCCCCC----CcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                        2444555543 2333    2467889999999999999999999999986

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.6e-36  Score=306.19  Aligned_cols=253  Identities=20%  Similarity=0.284  Sum_probs=170.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCc---EEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTEL---EYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.|++ .+.||+|+||.||+|.+..++.   .||||++.... ......+.+|++++..+ +||||+++++++.++...+
T Consensus        49 ~~y~i-~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  126 (325)
T 3kul_A           49 SRIHI-EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAM  126 (325)
T ss_dssp             GGEEE-EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCE
T ss_pred             hHeEE-eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccE
Confidence            44554 5789999999999999986665   49999996532 22345688999999987 5999999999997654332


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++--+ +              .+...+..               ....+  
T Consensus       127 ---lv-----------------------~e~~~~-~--------------~L~~~l~~---------------~~~~~--  148 (325)
T 3kul_A          127 ---IV-----------------------TEYMEN-G--------------SLDTFLRT---------------HDGQF--  148 (325)
T ss_dssp             ---EE-----------------------EECCTT-C--------------BHHHHHHT---------------TTTCS--
T ss_pred             ---EE-----------------------eeCCCC-C--------------cHHHHHHh---------------cccCC--
Confidence               11                       111000 0              00000000               00000  


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                           +...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       149 -----~~~~~~------------------~i~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~  197 (325)
T 3kul_A          149 -----TIMQLV------------------GMLRG---VGAGMRYLS--DLGYVHRDLAARNVLVD---SNLVCKVSDFGL  197 (325)
T ss_dssp             -----CHHHHH------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEECCCSS
T ss_pred             -----CHHHHH------------------HHHHH---HHHHHHHHH--HCCeeCCCCCcceEEEC---CCCCEEECCCCc
Confidence                 000000                  02333   667788888  99999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      ++........     ........||+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+..       
T Consensus       198 a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~-------  259 (325)
T 3kul_A          198 SRVLEDDPDA-----AYTTTGGKIPIRWTAPEAIAF------RTFSSASDVWSFGVVMWEVLAYGERPYWNMT-------  259 (325)
T ss_dssp             CEECC----C-----CEECC---CCGGGSCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-------
T ss_pred             ccccccCccc-----eeeccCCCCcccccCHhHhcC------CCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-------
Confidence            8755332110     001123457889999999963      468899999999999999999 999997653       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              ...+...+..+. ..+.  ...+++++.+||.+||..||.+|||+.|+++
T Consensus       260 --------~~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          260 --------NRDVISSVEEGY-RLPA--PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             --------HHHHHHHHHTTC-CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------HHHHHHHHHcCC-CCCC--CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                    233455555442 2221  1468999999999999999999999999885

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=5.2e-36  Score=305.09  Aligned_cols=252  Identities=20%  Similarity=0.259  Sum_probs=165.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEE----EEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEY----AVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~v----AvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .+.|++ .+.||+|+||.||+|++..+++.+    |+|.+.... ......+.+|+.++.++ +||||+++++++.++..
T Consensus        14 ~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   91 (327)
T 3poz_A           14 ETEFKK-IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTSTV   91 (327)
T ss_dssp             GGGEEE-EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSSE
T ss_pred             HHHccc-ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCe
Confidence            345654 578999999999999998887654    777764322 23456788999999997 59999999999876532


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..    |                       ..+-.+ +              .+...           +..    .....
T Consensus        92 ~~----v-----------------------~e~~~~-g--------------~L~~~-----------l~~----~~~~~  114 (327)
T 3poz_A           92 QL----I-----------------------TQLMPF-G--------------CLLDY-----------VRE----HKDNI  114 (327)
T ss_dssp             EE----E-----------------------EECCTT-C--------------BHHHH-----------HHH----STTSC
T ss_pred             EE----E-----------------------EEecCC-C--------------cHHHH-----------HHh----cCCCC
Confidence            11    1                       011000 0              00000           000    00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...++                        .|..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+||
T Consensus       115 ~-~~~~~------------------------~~~~q---i~~~l~~LH--~~~ivH~Dikp~NIll~~---~~~~kl~Df  161 (327)
T 3poz_A          115 G-SQYLL------------------------NWCVQ---IAKGMNYLE--DRRLVHRDLAARNVLVKT---PQHVKITDF  161 (327)
T ss_dssp             C-HHHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEEE---TTEEEECCT
T ss_pred             C-HHHHH------------------------HHHHH---HHHHHHHHh--hCCeeCCCCChheEEECC---CCCEEEccC
Confidence            0 00000                        03334   677788888  899999999999999954   356999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++........      .......||+.|+|||++.+      ..|+.++|||||||++|+|++ |.+||.+.+..   
T Consensus       162 g~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---  226 (327)
T 3poz_A          162 GLAKLLGAEEKE------YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---  226 (327)
T ss_dssp             THHHHHTTTCC-------------CCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---
T ss_pred             cceeEccCCccc------ccccCCCccccccChHHhcc------CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH---
Confidence            998754332211      01224467899999999974      468999999999999999999 99999875421   


Q ss_pred             cccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        360 WQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  .+...+..+. ...+    ...+.++.+||.+||..||.+||++.|+++|
T Consensus       227 ------------~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          227 ------------EISSILEKGERLPQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             ------------GHHHHHHTTCCCCCC----TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             ------------HHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                        2334444433 2222    3578999999999999999999999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-36  Score=306.65  Aligned_cols=278  Identities=21%  Similarity=0.303  Sum_probs=173.1

Q ss_pred             hhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|++ .+.||+|+||.||+|.+.     .++..||||++.... ......+.+|+.++.++.+||||+++++++.+....
T Consensus        46 ~y~~-~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  124 (344)
T 1rjb_A           46 NLEF-GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  124 (344)
T ss_dssp             GEEE-EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             Hcee-eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence            3444 578999999999999973     356789999996432 233467889999999986799999999998775443


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|      +|.+-    +.         .+...+.......         . .....+   .......+..     
T Consensus       125 ~---lv------~e~~~----~g---------~L~~~l~~~~~~~---------~-~~~~~~---~~~~~~~~~~-----  164 (344)
T 1rjb_A          125 Y---LI------FEYCC----YG---------DLLNYLRSKREKF---------S-EDEIEY---ENQKRLEEEE-----  164 (344)
T ss_dssp             E---EE------EECCT----TC---------BHHHHHHTTTTCC-----------------------------------
T ss_pred             E---EE------EecCC----CC---------cHHHHHhhccccc---------c-ccccch---hhhccccccc-----
Confidence            2   11      11100    00         0000000000000         0 000000   0000000000     


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                       ....++...++.                  +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||
T Consensus       165 -~~~~l~~~~~~~------------------i~~q---i~~aL~~LH--~~~ivH~Dikp~NIll~~---~~~~kL~Dfg  217 (344)
T 1rjb_A          165 -DLNVLTFEDLLC------------------FAYQ---VAKGMEFLE--FKSCVHRDLAARNVLVTH---GKVVKICDFG  217 (344)
T ss_dssp             -----CCHHHHHH------------------HHHH---HHHHHHHHH--HTTEEETTCSGGGEEEET---TTEEEECCCG
T ss_pred             -ccccCCHHHHHH------------------HHHH---HHHHHHHHH--hCCcccCCCChhhEEEcC---CCcEEeCCCc
Confidence             000001111110                  2333   667788888  899999999999999953   4569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      ++.........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+....    
T Consensus       218 ~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----  281 (344)
T 1rjb_A          218 LARDIMSDSNY------VVRGNARLPVKWMAPESLFE------GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD----  281 (344)
T ss_dssp             GGSCGGGCTTS------EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----
T ss_pred             cCcccccCccc------eeccCccCccCccCHHHhcc------CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH----
Confidence            99755432210      11234578999999999864      468999999999999999998 99999875421    


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                                ..+...+..+ ...+.  ...+++++.+||.+||..||.+|||+.|+++|-.
T Consensus       282 ----------~~~~~~~~~~-~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          282 ----------ANFYKLIQNG-FKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             ----------HHHHHHHHTT-CCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ----------HHHHHHHhcC-CCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence                      2233333333 22222  1357999999999999999999999999998743

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.1e-36  Score=302.42  Aligned_cols=260  Identities=21%  Similarity=0.273  Sum_probs=172.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|.+ ++.||+|+||.||+|.+..+++.||+|++.+........+.+|++++..+ +||||+++++++.++...+   .
T Consensus        10 ~~~~~-~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~---l   84 (310)
T 3s95_A           10 SDLIH-GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLN---F   84 (310)
T ss_dssp             GGEEE-EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE---E
T ss_pred             hHeec-cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeE---E
Confidence            34554 67899999999999999999999999998655444556788999999987 5999999999987654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .++--+ +              .+...           +...    ....+ ...+
T Consensus        85 v-----------------------~e~~~~-~--------------~L~~~-----------l~~~----~~~~~-~~~~  110 (310)
T 3s95_A           85 I-----------------------TEYIKG-G--------------TLRGI-----------IKSM----DSQYP-WSQR  110 (310)
T ss_dssp             E-----------------------EECCTT-C--------------BHHHH-----------HHHC----CTTSC-HHHH
T ss_pred             E-----------------------EEecCC-C--------------cHHHH-----------HHhc----cCCCC-HHHH
Confidence            1                       111000 0              00000           0000    00000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       111 ~------------------------~i~~q---i~~al~~lH--~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A          111 V------------------------SFAKD---IASGMAYLH--SMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLM  158 (310)
T ss_dssp             H------------------------HHHHH---HHHHHHHHH--HTTEECSCCSTTSEEEC---TTSCEEECCCTTCEEC
T ss_pred             H------------------------HHHHH---HHHHHHHHH--hCCccCCCCCcCeEEEC---CCCCEEEeecccceec
Confidence            0                        03334   677788888  99999999999999994   4466999999998754


Q ss_pred             ccCCCCCC------CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        287 KFNTSVHS------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       287 ~~~~~~~~------~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      ........      ........+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||..........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~  232 (310)
T 3s95_A          159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING------RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF  232 (310)
T ss_dssp             C--------------------CCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS
T ss_pred             ccccccccccccccccccccccccCCCcceeCHHHhcC------CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH
Confidence            32221100      000112236789999999999863      568999999999999999999999997643222111


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ..      .......   .   .+|    ..+++++.+||.+||..||++|||++++++
T Consensus       233 ~~------~~~~~~~---~---~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          233 GL------NVRGFLD---R---YCP----PNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             SB------CHHHHHH---H---TCC----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hh------hhhcccc---c---cCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            00      0111111   1   122    357889999999999999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.3e-35  Score=299.60  Aligned_cols=271  Identities=22%  Similarity=0.300  Sum_probs=175.2

Q ss_pred             cchhcccCceeceeCceEEEEEEE-----ccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVN-----ILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~-----~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .+.|++ .+.||+|+||.||+|.+     ..+++.||||++.+... .....+.+|+.++.++.+||||+++++++....
T Consensus        26 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  104 (316)
T 2xir_A           26 RDRLKL-GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  104 (316)
T ss_dssp             GGGEEE-EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             hhheee-eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence            355665 57899999999999985     35678999999965432 223568899999999878999999999987543


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ...   .++     +|.+-    +    ..|.+     .+......             ..+.-..++..          
T Consensus       105 ~~~---~lv-----~e~~~----~----~~L~~-----~l~~~~~~-------------~~~~~~~~~~~----------  140 (316)
T 2xir_A          105 GPL---MVI-----VEFCK----F----GNLST-----YLRSKRNE-------------FVPYKVAPEDL----------  140 (316)
T ss_dssp             SCC---EEE-----EECCT----T----EEHHH-----HHHTCTTS-------------EECC-----------------
T ss_pred             Cce---EEE-----EEcCC----C----CcHHH-----HHHhcccc-------------cccccccchhh----------
Confidence            211   011     01000    0    00000     00000000             00000000000          


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      .   .+.++...++.                  +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       141 ~---~~~~~~~~~~~------------------~~~q---i~~al~~lH--~~~i~H~dikp~Nil~~---~~~~~kl~D  191 (316)
T 2xir_A          141 Y---KDFLTLEHLIC------------------YSFQ---VAKGMEFLA--SRKCIHRDLAARNILLS---EKNVVKICD  191 (316)
T ss_dssp             C---TTCEEHHHHHH------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECC
T ss_pred             h---ccccCHHHHHH------------------HHHH---HHHHHHHHH--hCCcccccCccceEEEC---CCCCEEECC
Confidence            0   00011111111                  2233   667788888  99999999999999994   445699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+++........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+....  
T Consensus       192 fg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--  257 (316)
T 2xir_A          192 FGLARDIYKDPDY------VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--  257 (316)
T ss_dssp             CGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS--
T ss_pred             CccccccccCccc------eeccCCCcceeecCchhhcc------ccccchhHHHHHHHHHHHHHhCCCCCCcccchh--
Confidence            9998754322110      11234578999999999964      468999999999999999998 99999875421  


Q ss_pred             CcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  ..+...+..+. ..+|    ..+++++++||.+||..||.+|||++|+++|
T Consensus       258 ------------~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          258 ------------EEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ------------HHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------HHHHHHhccCccCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                        22344444443 2333    3579999999999999999999999999987

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.3e-36  Score=301.30  Aligned_cols=250  Identities=15%  Similarity=0.204  Sum_probs=170.3

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCC-------cEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTE-------LEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~-------~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      .+.|.+ .+.||+|+||.||+|.+..++       ..||+|++.+........+.+|++++..+ +||||+++++++.++
T Consensus         7 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            7 NEDLIF-NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCG   84 (289)
T ss_dssp             GGGEEE-EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCT
T ss_pred             hhHeee-eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeC
Confidence            345655 578999999999999998877       47999999765545567889999999997 599999999999765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+    +                      +.+|.-+ +              .+...+....               .
T Consensus        85 ~~~~----l----------------------v~e~~~~-~--------------~L~~~l~~~~---------------~  108 (289)
T 4fvq_A           85 DENI----L----------------------VQEFVKF-G--------------SLDTYLKKNK---------------N  108 (289)
T ss_dssp             TCCE----E----------------------EEECCTT-C--------------BHHHHHHHTG---------------G
T ss_pred             CCCE----E----------------------EEECCCC-C--------------CHHHHHHhCC---------------C
Confidence            4322    1                      1111100 0              0000000000               0


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCC-----C
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL-----S  273 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~-----~  273 (539)
                      ..       +...++                  .+..|   ++.++.|+|  ++||+||||||+|||+..++..     +
T Consensus       109 ~~-------~~~~~~------------------~i~~q---i~~~L~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A          109 CI-------NILWKL------------------EVAKQ---LAAAMHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             GC-------CHHHHH------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             CC-------CHHHHH------------------HHHHH---HHHHHHHHh--hCCeECCCcCcceEEEecCCcccccccc
Confidence            00       000000                  02334   667788888  9999999999999999654321     1


Q ss_pred             CceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC-CCCCC
Q psy16343        274 PVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY-PPFYG  352 (539)
Q Consensus       274 ~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~-~PF~~  352 (539)
                      .+||+|||++.....            .....||+.|+|||++..     ...|+.++|||||||++|+|++|. +||.+
T Consensus       159 ~~kl~Dfg~~~~~~~------------~~~~~~~~~y~aPE~~~~-----~~~~~~~~DiwslG~il~el~~g~~~~~~~  221 (289)
T 4fvq_A          159 FIKLSDPGISITVLP------------KDILQERIPWVPPECIEN-----PKNLNLATDKWSFGTTLWEICSGGDKPLSA  221 (289)
T ss_dssp             EEEECCCCSCTTTSC------------HHHHHHTTTTSCHHHHHC-----GGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             eeeeccCcccccccC------------ccccCCcCcccCHHHhCC-----CCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence            289999999864321            124578999999999863     245889999999999999999955 55543


Q ss_pred             CCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ..               .. ....+......+|.    ..++++++||.+||..||.+|||++|+++|
T Consensus       222 ~~---------------~~-~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          222 LD---------------SQ-RKLQFYEDRHQLPA----PKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             SC---------------HH-HHHHHHHTTCCCCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cc---------------hH-HHHHHhhccCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            21               11 11222333444443    457889999999999999999999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.9e-36  Score=313.60  Aligned_cols=272  Identities=24%  Similarity=0.348  Sum_probs=176.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.+.|.+ .++||+|+||.||+|.+..+|+.||||++.+.. ......+.+|++++.++ +||||+++++++.+.....
T Consensus         6 ~~~~~y~i-~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~   83 (396)
T 4eut_A            6 TSNHLWLL-SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRH   83 (396)
T ss_dssp             CSSEEEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCC
T ss_pred             CCCCceEE-EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCe
Confidence            35667776 578999999999999999999999999996532 23456778999999997 5999999999887543211


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .          ++           +.+|.-+ +              .+...+....       .      ....+ 
T Consensus        84 ---~----------~l-----------v~e~~~~-g--------------~L~~~l~~~~-------~------~~~l~-  110 (396)
T 4eut_A           84 ---K----------VL-----------IMEFCPC-G--------------SLYTVLEEPS-------N------AYGLP-  110 (396)
T ss_dssp             ---E----------EE-----------EECCCTT-E--------------EHHHHTTSGG-------G------TTCCC-
T ss_pred             ---e----------EE-----------EEecCCC-C--------------CHHHHHHhhh-------c------ccCCC-
Confidence               0          01           1111000 0              0000000000       0      00000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecC-CCCCCCceeccCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVH-PDQLSPVKLCDFD  281 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~-~~~~~~ikl~DFG  281 (539)
                      ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.. ++..+.+||+|||
T Consensus       111 ~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG  161 (396)
T 4eut_A          111 ESEFLI------------------------VLRD---VVGGMNHLR--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG  161 (396)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--HCCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence            000110                        2333   677888888  999999999999999732 2334568999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCC--CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE--ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~--~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      +++......         ...+.+||+.|+|||++.......  ...|+.++|||||||++|+|++|..||.+.....  
T Consensus       162 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~--  230 (396)
T 4eut_A          162 AARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--  230 (396)
T ss_dssp             GCEECCCGG---------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT--
T ss_pred             CceEccCCC---------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc--
Confidence            987543222         223568999999999986310000  0247789999999999999999999997643221  


Q ss_pred             cccCccchhhHHHHHHHHhcCCCC-------------------CCC--CCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYD-------------------FPE--GEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~-------------------~p~--~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                              . ...++..+..+.+.                   +|.  .....+++.+++||.+||..||++|++++|++
T Consensus       231 --------~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l  301 (396)
T 4eut_A          231 --------R-NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFF  301 (396)
T ss_dssp             --------T-CHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHH
T ss_pred             --------c-hHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHH
Confidence                    1 12334444444321                   111  01123456889999999999999999999885


Q ss_pred             c
Q psy16343        419 K  419 (539)
Q Consensus       419 ~  419 (539)
                      +
T Consensus       302 ~  302 (396)
T 4eut_A          302 A  302 (396)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.1e-35  Score=293.64  Aligned_cols=250  Identities=18%  Similarity=0.241  Sum_probs=170.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+. ++..||||++.... ....++.+|++++..+ +||||+++++++.+....+   .
T Consensus        24 ~~y~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   96 (283)
T 3gen_A           24 KDLTF-LKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIF---I   96 (283)
T ss_dssp             GGEEE-EEECC---CEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEE---E
T ss_pred             HHHHh-HhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC-CCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeE---E
Confidence            44554 478999999999999765 67789999997533 3456789999999997 5999999999997654332   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-                 + +              .+...+...               ....+ ...+
T Consensus        97 v------~e~~~-----------------~-~--------------~L~~~l~~~---------------~~~~~-~~~~  122 (283)
T 3gen_A           97 I------TEYMA-----------------N-G--------------CLLNYLREM---------------RHRFQ-TQQL  122 (283)
T ss_dssp             E------ECCCT-----------------T-C--------------BHHHHHHCG---------------GGCCC-HHHH
T ss_pred             E------EeccC-----------------C-C--------------cHHHHHHHh---------------ccCCC-HHHH
Confidence            1      11110                 0 0              000000000               00000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       123 ~~------------------------i~~q---i~~~l~~lH--~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A          123 LE------------------------MCKD---VCEAMEYLE--SKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             HH------------------------HHHH---HHHHHHHHH--HTTCCCSSCSGGGEEEC---TTSCEEECSTTGGGGB
T ss_pred             HH------------------------HHHH---HHHHHHHHH--HCCccCCCCccceEEEc---CCCCEEEccccccccc
Confidence            00                        2333   667778888  99999999999999994   4457999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......||+.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.+.+           
T Consensus       171 ~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----------  226 (283)
T 3gen_A          171 LDDEYT-------SSVGSKFPVRWSPPEVLMY------SKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----------  226 (283)
T ss_dssp             CCHHHH-------STTSTTSCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----------
T ss_pred             cccccc-------cccCCccCcccCCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCccccC-----------
Confidence            321110       1124467889999999974      468999999999999999998 999997653           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          .......+..+......   ...++++.+||.+||..||.+|||++|+++|
T Consensus       227 ----~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          227 ----NSETAEHIAQGLRLYRP---HLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             ----HHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ----hhHHHHHHhcccCCCCC---CcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                23345556555332222   3578999999999999999999999999976

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.3e-35  Score=292.78  Aligned_cols=249  Identities=20%  Similarity=0.275  Sum_probs=172.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+. ++..||||++.... .....+.+|++++.++ +||||+++++++.+....+   .
T Consensus         8 ~~y~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   80 (268)
T 3sxs_A            8 EEITL-LKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIY---I   80 (268)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEET-TTEEEEEEEECBTT-BCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEE---E
T ss_pred             hheee-eeeeccCCCceEEEEEec-CceeEEEEEeccCC-CcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceE---E
Confidence            45555 478999999999999765 56789999996533 3456789999999997 5999999999987654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      |                       .++--+ +              .+...+... ..+.+                 ..
T Consensus        81 v-----------------------~e~~~~-~--------------~L~~~l~~~~~~~~~-----------------~~  105 (268)
T 3sxs_A           81 V-----------------------TEYISN-G--------------CLLNYLRSHGKGLEP-----------------SQ  105 (268)
T ss_dssp             E-----------------------EECCTT-C--------------BHHHHHHHHGGGCCH-----------------HH
T ss_pred             E-----------------------EEccCC-C--------------cHHHHHHHcCCCCCH-----------------HH
Confidence            1                       111000 0              000000000 00000                 01


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      +|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       106 ~~~------------------------i~~q---i~~~l~~lH--~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A          106 LLE------------------------MCYD---VCEGMAFLE--SHQFIHRDLAARNCLVD---RDLCVKVSDFGMTRY  153 (268)
T ss_dssp             HHH------------------------HHHH---HHHHHHHHH--HTTEEESSCSGGGEEEC---TTCCEEECCTTCEEE
T ss_pred             HHH------------------------HHHH---HHHHHHHHH--HCCeecCCcCcceEEEC---CCCCEEEccCcccee
Confidence            110                        2333   667788888  99999999999999994   445799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......       ......||+.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.+.+          
T Consensus       154 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----------  210 (268)
T 3sxs_A          154 VLDDQYV-------SSVGTKFPVKWSAPEVFHY------FKYSSKSDVWAFGILMWEVFSLGKMPYDLYT----------  210 (268)
T ss_dssp             CCTTCEE-------ECCSCCCCGGGCCHHHHHH------SEEETTHHHHHHHHHHHHHHTTTCCTTTTSC----------
T ss_pred             cchhhhh-------cccCCCcCcccCCHHHHhc------cCCchhhhhHHHHHHHHHHHcCCCCCccccC----------
Confidence            4322110       1124467888999999874      458899999999999999998 999997643          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           .......+..+.....+   ...++++.+||.+||..||.+|||++|+++|
T Consensus       211 -----~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          211 -----NSEVVLKVSQGHRLYRP---HLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             -----HHHHHHHHHTTCCCCCC---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -----hHHHHHHHHcCCCCCCC---CcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 22344455555433332   3578999999999999999999999999986

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.3e-36  Score=300.96  Aligned_cols=272  Identities=23%  Similarity=0.334  Sum_probs=173.8

Q ss_pred             chhcccCceeceeCceEEEEEEE-----ccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVN-----ILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~-----~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ .+.||+|+||.||+|.+     ..+++.||||++..... .....+.+|+.++.++.+||||+++++++.+...
T Consensus        23 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           23 NRLSF-GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhH-HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            45554 57899999999999985     45778999999965432 2346788999999998679999999999977654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-    +    -.|.++     +......        ..  ..   -..+.....    .....
T Consensus       102 ~~---lv------~e~~~----~----~~L~~~-----l~~~~~~--------~~--~~---~~~~~~~~~----~~~~~  142 (313)
T 1t46_A          102 TL---VI------TEYCC----Y----GDLLNF-----LRRKRDS--------FI--CS---KTSPAIMED----DELAL  142 (313)
T ss_dssp             CE---EE------EECCT----T----EEHHHH-----HHHTTTT--------C-----------------------CCC
T ss_pred             cE---EE------EecCC----C----CCHHHH-----HHhcccc--------cc--cc---ccccccccc----ccccC
Confidence            32   11      11100    0    000000     0000000        00  00   000000000    00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ..++|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+||
T Consensus       143 ~-~~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~~---~~~~kl~Df  189 (313)
T 1t46_A          143 D-LEDLLS------------------------FSYQ---VAKGMAFLA--SKNCIHRDLAARNILLTH---GRITKICDF  189 (313)
T ss_dssp             C-HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEET---TTEEEECCC
T ss_pred             C-HHHHHH------------------------HHHH---HHHHHHHHH--HCCeecCCCccceEEEcC---CCCEEEccc
Confidence            0 000110                        2233   667778888  999999999999999954   456999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |++.........      ....+..||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+....   
T Consensus       190 g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---  254 (313)
T 1t46_A          190 GLARDIKNDSNY------VVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---  254 (313)
T ss_dssp             GGGSCTTSCTTS------EECSSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS---
T ss_pred             cccccccccccc------eeccCCCCcceeeChHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCCCcccch---
Confidence            998755332210      11234568899999999864      468899999999999999998 99999875422   


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 ......+..+. ..+.  ...+++++++||.+||..||.+|||++|++++
T Consensus       255 -----------~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          255 -----------SKFYKMIKEGF-RMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             -----------HHHHHHHHHTC-CCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------hHHHHHhccCC-CCCC--cccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                       12333333332 2211  24689999999999999999999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=5.3e-36  Score=302.14  Aligned_cols=274  Identities=22%  Similarity=0.315  Sum_probs=173.4

Q ss_pred             chhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|.+ .+.||+|+||.||+|.+.     .++..||||++..... .....+.+|++++..+ +||||+++++++.+...
T Consensus        23 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           23 KNLVL-GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             GGEEE-EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSS
T ss_pred             hheee-eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCc
Confidence            44554 578999999999999884     4558899999964322 2345678999999987 69999999999877654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-    +.    .|.++     +....             ..+ +.+..+.....     ....
T Consensus       101 ~~---lv------~e~~~----~~----~L~~~-----l~~~~-------------~~~-~~~~~~~~~~~-----~~~~  139 (314)
T 2ivs_A          101 LL---LI------VEYAK----YG----SLRGF-----LRESR-------------KVG-PGYLGSGGSRN-----SSSL  139 (314)
T ss_dssp             CE---EE------EECCT----TC----BHHHH-----HHHTT-------------TST-TEEC----------------
T ss_pred             eE---EE------EeecC----CC----CHHHH-----HHHHh-------------hcc-CCccccccccc-----cccc
Confidence            32   11      11100    00    00000     00000             000 00000000000     0000


Q ss_pred             C-cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        201 D-KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       201 ~-~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      . .....++...++.                  +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|
T Consensus       140 ~~~~~~~~~~~~~~~------------------i~~q---i~~~l~~lH--~~~ivH~dikp~NIli~~---~~~~kl~D  193 (314)
T 2ivs_A          140 DHPDERALTMGDLIS------------------FAWQ---ISQGMQYLA--EMKLVHRDLAARNILVAE---GRKMKISD  193 (314)
T ss_dssp             -----CEECHHHHHH------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEET---TTEEEECC
T ss_pred             ccccccCcCHHHHHH------------------HHHH---HHHHHHHHH--HCCCcccccchheEEEcC---CCCEEEcc
Confidence            0 0000011111110                  2233   667788888  999999999999999954   35699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+++.........      ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+.   
T Consensus       194 fg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---  258 (314)
T 2ivs_A          194 FGLSRDVYEEDSYV------KRSQGRIPVKWMAIESLFD------HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP---  258 (314)
T ss_dssp             CTTCEECTTTSCEE------CSSCCCSCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---
T ss_pred             ccccccccccccce------eccCCCCcccccChhhhcC------CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence            99987543222110      1224568899999999864      458899999999999999999 9999987542   


Q ss_pred             CcccCccchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  ..+...+..+.. ..+    ..+++++.+||.+||..||.+|||++|+++|
T Consensus       259 ------------~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          259 ------------ERLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ------------GGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------HHHHHHhhcCCcCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                        124455554432 222    4689999999999999999999999999875

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.1e-35  Score=295.59  Aligned_cols=251  Identities=21%  Similarity=0.335  Sum_probs=161.6

Q ss_pred             cchhcccCceeceeCceEEEEEEEccC---CcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILT---ELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.|++ .+.||+|+||.||+|.+..+   +..||||++..... .....+.+|+.++..+ +||||+++++++.++..+
T Consensus        14 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   91 (281)
T 1mp8_A           14 RERIEL-GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVITENPVW   91 (281)
T ss_dssp             GGGEEE-EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSCE
T ss_pred             hHHeEE-EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEEccCccE
Confidence            455665 57899999999999998654   45799999865322 2345688999999987 599999999988543211


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                           +                      +.++--+ +              .+...+....               ...+
T Consensus        92 -----l----------------------v~e~~~~-~--------------~L~~~l~~~~---------------~~~~  114 (281)
T 1mp8_A           92 -----I----------------------IMELCTL-G--------------ELRSFLQVRK---------------YSLD  114 (281)
T ss_dssp             -----E----------------------EEECCTT-E--------------EHHHHHHHTT---------------TTSC
T ss_pred             -----E----------------------EEecCCC-C--------------CHHHHHHhcC---------------CCCC
Confidence                 1                      1111000 0              0000000000               0000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                       ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||
T Consensus       115 -~~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg  161 (281)
T 1mp8_A          115 -LASLIL------------------------YAYQ---LSTALAYLE--SKRFVHRDIAARNVLVSS---NDCVKLGDFG  161 (281)
T ss_dssp             -HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEEE---TTEEEECC--
T ss_pred             -HHHHHH------------------------HHHH---HHHHHHHHH--hCCeecccccHHHEEECC---CCCEEECccc
Confidence             000000                        2233   667778888  999999999999999954   3569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++........       ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+..    
T Consensus       162 ~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----  224 (281)
T 1mp8_A          162 LSRYMEDSTYY-------KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----  224 (281)
T ss_dssp             ------------------------CCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----
T ss_pred             cccccCccccc-------ccccCCCcccccChhhccc------CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----
Confidence            98754322110       1123467889999999963      468899999999999999996 99999875422    


Q ss_pred             ccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 .+...+..+. ..++    ..+++++++||.+||..||.+|||+.|++++
T Consensus       225 -----------~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          225 -----------DVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             -----------GHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------HHHHHHHcCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                       2444555543 2233    4689999999999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-35  Score=303.23  Aligned_cols=277  Identities=19%  Similarity=0.216  Sum_probs=174.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .+.|++ .+.||+|+||.||+|.+.     .+++.||||++.+... .....+.+|++++..+ +||||+++++++.+..
T Consensus        46 ~~~~~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~  123 (343)
T 1luf_A           46 RNNIEY-VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGK  123 (343)
T ss_dssp             GGGCEE-EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSS
T ss_pred             HHHCee-eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCC
Confidence            345655 578999999999999987     4558899999975332 2245688999999997 6999999999997755


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .|      +|.+-    +.    .|     ...+..........   ........        ...........
T Consensus       124 ~~~---lv------~e~~~----~~----~L-----~~~l~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~  170 (343)
T 1luf_A          124 PMC---LL------FEYMA----YG----DL-----NEFLRSMSPHTVCS---LSHSDLST--------RARVSSPGPPP  170 (343)
T ss_dssp             SCE---EE------EECCT----TC----BH-----HHHHHHTCC---------------------------------CC
T ss_pred             ceE---EE------EecCC----CC----cH-----HHHHHHhCcccccc---cccccccc--------cccccccCCCC
Confidence            433   11      11100    00    00     00000000000000   00000000        00000000000


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                             ++...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       171 -------l~~~~~~------------------~i~~q---i~~~l~~LH--~~~ivH~Dlkp~NIl~~---~~~~~kl~D  217 (343)
T 1luf_A          171 -------LSCAEQL------------------CIARQ---VAAGMAYLS--ERKFVHRDLATRNCLVG---ENMVVKIAD  217 (343)
T ss_dssp             -------CCHHHHH------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECC
T ss_pred             -------CCHHHHH------------------HHHHH---HHHHHHHHH--hCCeecCCCCcceEEEC---CCCeEEEee
Confidence                   0000000                  02333   667788888  99999999999999994   445799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+++........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+    
T Consensus       218 fg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p~~~~~----  281 (343)
T 1luf_A          218 FGLSRNIYSADYY------KADGNDAIPIRWMPPESIFY------NRYTTESDVWAYGVVLWEIFSYGLQPYYGMA----  281 (343)
T ss_dssp             CSCHHHHTGGGCB------C----CCBCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC----
T ss_pred             cCCCcccccCccc------cccCCCcccceecChhhhcc------CCcCcccccHHHHHHHHHHHhcCCCcCCCCC----
Confidence            9998754322110      01234578999999999874      468999999999999999998 999998653    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 ...+...+..+......   ..+++++.+||.+||..||.+||++.+++++
T Consensus       282 -----------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          282 -----------HEEVIYYVRDGNILACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             -----------HHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------hHHHHHHHhCCCcCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                       23455566666542221   3689999999999999999999999999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.3e-36  Score=317.88  Aligned_cols=146  Identities=22%  Similarity=0.315  Sum_probs=113.3

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.....           ..+.+| +.|+|||++...
T Consensus       220 i~~aL~~LH--~~~iiHrDiKp~NILl~---~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~  282 (413)
T 3dzo_A          220 VIRLLASLH--HYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAER  282 (413)
T ss_dssp             HHHHHHHHH--HTTEECSCCCGGGEEEC---TTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHH
T ss_pred             HHHHHHHHH--hCCcccCCcccceEEEe---cCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhhhcc
Confidence            677888888  99999999999999995   4456999999998753321           346789 999999999421


Q ss_pred             C---CC-CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHH
Q psy16343        320 M---GP-EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE  395 (539)
Q Consensus       320 ~---~~-~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~  395 (539)
                      .   +. ....|+.++|||||||++|+|++|+.||.+.+...               ....+      +.  .+..++++
T Consensus       283 ~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~---------------~~~~~------~~--~~~~~~~~  339 (413)
T 3dzo_A          283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG---------------GSEWI------FR--SCKNIPQP  339 (413)
T ss_dssp             TSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS---------------CSGGG------GS--SCCCCCHH
T ss_pred             ccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh---------------hHHHH------Hh--hcccCCHH
Confidence            0   00 12357889999999999999999999998754221               01111      11  23468899


Q ss_pred             HHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        396 AKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       396 ~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                      +++||.+||..||++||++.|+++||||..
T Consensus       340 ~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          340 VRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            999999999999999999999999999953

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=6e-36  Score=304.29  Aligned_cols=268  Identities=18%  Similarity=0.218  Sum_probs=175.4

Q ss_pred             ccchhcccCceeceeCceEEEEEE-----EccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCV-----NILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDD  118 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~-----~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~  118 (539)
                      ..+.|++ .+.||+|+||.||+|.     +..++..||||++..... ....++.+|+.++.++ +||||+++++++.+.
T Consensus        28 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           28 PRKNITL-IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQS  105 (327)
T ss_dssp             CGGGCEE-EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred             ChhheEE-EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCC
Confidence            3455665 5789999999999998     567888999999964322 2345678899999997 699999999998765


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ...+   .|                       .++--+ +              .+...           +.....  ..
T Consensus       106 ~~~~---lv-----------------------~e~~~~-~--------------~L~~~-----------l~~~~~--~~  131 (327)
T 2yfx_A          106 LPRF---IL-----------------------MELMAG-G--------------DLKSF-----------LRETRP--RP  131 (327)
T ss_dssp             SSCE---EE-----------------------EECCTT-E--------------EHHHH-----------HHHTSC--CS
T ss_pred             CCcE---EE-----------------------EecCCC-C--------------cHHHH-----------HHhhcc--cc
Confidence            4332   11                       111000 0              00000           000000  00


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                      ......+...+-.                     +..+   ++.++.|+|  ++||+||||||+|||+..++....+||+
T Consensus       132 ~~~~~~~~~~~~~---------------------i~~q---i~~al~~LH--~~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          132 SQPSSLAMLDLLH---------------------VARD---IACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             SSTTSCCHHHHHH---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             cccccccHHHHHH---------------------HHHH---HHHHHHHHh--hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence            0000000000000                     2233   667778888  9999999999999999765555679999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED  357 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~  357 (539)
                      |||++.........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+..   
T Consensus       186 Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~---  250 (327)
T 2yfx_A          186 DFGMARDIYRASYY------RKGGCAMLPVKWMPPEAFME------GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---  250 (327)
T ss_dssp             CCHHHHHHHC------------CCGGGSCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---
T ss_pred             cccccccccccccc------ccCCCcCCCcceeCHhHhcC------CCCCchhhHHHHHHHHHHHHcCCCCCCCCcC---
Confidence            99998643222110      01234578999999999864      468899999999999999998 999997653   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                  ...+...+..+....+.   ..+++++.+||.+||..||.+||+++++++|.|..
T Consensus       251 ------------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          251 ------------NQEVLEFVTSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             ------------HHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------------HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence                        23345555554332221   46899999999999999999999999999998864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=301.72  Aligned_cols=252  Identities=20%  Similarity=0.272  Sum_probs=165.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEE----EEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEY----AVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~v----AvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .+.|++ .+.||+|+||.||+|.+..+++.|    |+|.+... .......+.+|+.++..+ +||||+++++++.+...
T Consensus        14 ~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   91 (327)
T 3lzb_A           14 ETEFKK-IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTSTV   91 (327)
T ss_dssp             TTTEEE-EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSSE
T ss_pred             HhHceE-EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCCc
Confidence            345665 578999999999999998888765    66665432 233467788999999987 59999999999876532


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..    |      .+.+.                 + +              .+...           +..    .....
T Consensus        92 ~~----v------~~~~~-----------------~-g--------------~L~~~-----------l~~----~~~~~  114 (327)
T 3lzb_A           92 QL----I------TQLMP-----------------F-G--------------CLLDY-----------VRE----HKDNI  114 (327)
T ss_dssp             EE----E------ECCCS-----------------S-C--------------BHHHH-----------HHH----TTTCC
T ss_pred             eE----E------EEecC-----------------C-C--------------cHHHH-----------HHh----cCCCC
Confidence            11    1      00000                 0 0              00000           000    00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      +. ..++                        .|..|   ++.++.|+|  ++||+||||||+|||+..   .+.+||+||
T Consensus       115 ~~-~~~~------------------------~i~~q---i~~aL~~LH--~~~ivH~Dikp~NIl~~~---~~~~kL~Df  161 (327)
T 3lzb_A          115 GS-QYLL------------------------NWCVQ---IAKGMNYLE--DRRLVHRDLAARNVLVKT---PQHVKITDF  161 (327)
T ss_dssp             CH-HHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEEE---TTEEEECCT
T ss_pred             CH-HHHH------------------------HHHHH---HHHHHHHHh--hCCCcCCCCCHHHEEEcC---CCCEEEccC
Confidence            00 0000                        03334   677788888  999999999999999954   356999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++........      .......||+.|+|||++.+      ..|+.++|||||||++|+|++ |.+||.+....   
T Consensus       162 G~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---  226 (327)
T 3lzb_A          162 GLAKLLGAEEKE------YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---  226 (327)
T ss_dssp             TC----------------------CCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---
T ss_pred             cceeEccCcccc------ccccCCCccccccCHHHHcC------CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH---
Confidence            999754332211      11224467889999999974      468999999999999999999 99999875422   


Q ss_pred             cccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        360 WQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  .+...+..+. +..+    ..++.++.+||.+||..||.+||++.|+++.
T Consensus       227 ------------~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          227 ------------EISSILEKGERLPQP----PICTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             ------------GHHHHHHTTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------HHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                        2334444433 2222    3579999999999999999999999999863

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.3e-35  Score=296.01  Aligned_cols=268  Identities=19%  Similarity=0.240  Sum_probs=173.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..+.|++ .+.||+|+||.||+|.+ .+++.||||++..........+.+|++++..+ +||||+++++++.+....+  
T Consensus        37 ~~~~y~~-~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~--  111 (321)
T 2qkw_B           37 ATNNFDH-KFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMI--  111 (321)
T ss_dssp             CCCCCSC-CCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCE--
T ss_pred             HHhccCc-cceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEE--
Confidence            4455664 57899999999999985 47889999998765444567788999999887 5999999999987654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                      +.++.-+ +              .+...+....      ..      ....+ ..
T Consensus       112 --l----------------------v~e~~~~-~--------------~L~~~l~~~~------~~------~~~~~-~~  139 (321)
T 2qkw_B          112 --L----------------------IYKYMEN-G--------------NLKRHLYGSD------LP------TMSMS-WE  139 (321)
T ss_dssp             --E----------------------EEECCTT-C--------------BTGGGSSSSC------CC------SCCCC-HH
T ss_pred             --E----------------------EEEcCCC-C--------------cHHHHHhccC------CC------ccccC-HH
Confidence              1                      1111000 0              0000000000      00      00000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       140 ~~~~------------------------i~~~---i~~~l~~lH--~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          140 QRLE------------------------ICIG---AARGLHYLH--TRAIIHRDVKSINILLD---ENFVPKITDFGISK  187 (321)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCSTTEEEC---TTCCEEECCCTTCE
T ss_pred             HHHH------------------------HHHH---HHHHHHHhc--CCCeecCCCCHHHEEEC---CCCCEEEeeccccc
Confidence            0000                        2233   667788888  89999999999999994   44679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......      .......+||+.|+|||++..      ..|+.++|||||||++|+|++|++||.+....+...    
T Consensus       188 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~----  251 (321)
T 2qkw_B          188 KGTELDQ------THLSTVVKGTLGYIDPEYFIK------GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN----  251 (321)
T ss_dssp             ECSSSSC------CCCBCCCEEETTTCCHHHHHH------CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCC----
T ss_pred             ccccccc------cccccccCCCccccCHHHhcC------CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHH----
Confidence            5332111      011234579999999999864      468899999999999999999999998765432100    


Q ss_pred             cchhhHHHHHHHHhcCCC------CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCC
Q psy16343        365 TCHACQEILFHSIQQGHY------DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP  421 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~------~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hp  421 (539)
                          ...........+.+      .++.......+.++.+||.+||..||++|||++|+++|-
T Consensus       252 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          252 ----LAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             ----HHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ----HHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                00001111112211      111111123456789999999999999999999999774

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.1e-35  Score=297.76  Aligned_cols=271  Identities=19%  Similarity=0.196  Sum_probs=169.8

Q ss_pred             ccchhcccCceeceeCceEEEEEE----EccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~----~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ..+.|++ .+.||+|+||.||+|+    +..+++.||||++..........+.+|++++..+ +||||+++++++.....
T Consensus         8 ~~~~~~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   85 (295)
T 3ugc_A            8 EERHLKF-LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR   85 (295)
T ss_dssp             CGGGEEE-EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHH
T ss_pred             CHHHhhh-hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCC
Confidence            3455665 5789999999999998    5678999999999765444456788999999997 59999999998854322


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..              +.          -+.++--+ +              .+...+...               ....
T Consensus        86 ~~--------------~~----------lv~e~~~~-~--------------~L~~~l~~~---------------~~~~  111 (295)
T 3ugc_A           86 RN--------------LK----------LIMEYLPY-G--------------SLRDYLQKH---------------KERI  111 (295)
T ss_dssp             TS--------------CE----------EEEECCTT-C--------------BHHHHHHHC---------------GGGC
T ss_pred             Cc--------------eE----------EEEEeCCC-C--------------CHHHHHHhc---------------cccc
Confidence            10              00          01111000 0              000000000               0000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      + ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+||
T Consensus       112 ~-~~~~~~------------------------~~~q---i~~~l~~lH--~~~ivH~Dikp~Nil~~~---~~~~kl~Df  158 (295)
T 3ugc_A          112 D-HIKLLQ------------------------YTSQ---ICKGMEYLG--TKRYIHRDLATRNILVEN---ENRVKIGDF  158 (295)
T ss_dssp             C-HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEEE---TTEEEECCC
T ss_pred             C-HHHHHH------------------------HHHH---HHHHHHHHh--cCCcccCCCCHhhEEEcC---CCeEEEccC
Confidence            0 000000                        2333   667788888  999999999999999954   356999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+++.........     .......||+.|+|||++..      ..|+.++|||||||++|+|++|..||..........
T Consensus       159 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~  227 (295)
T 3ugc_A          159 GLTKVLPQDKEFF-----KVKEPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM  227 (295)
T ss_dssp             CSCC------------------CTTCGGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHH
T ss_pred             cccccccCCccee-----eeccCCCCccceeCcHHhcC------CCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhh
Confidence            9997553322110     11224468889999999974      468999999999999999999999986531100000


Q ss_pred             -ccCccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        361 -QRGETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       361 -~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                       ............+...+..+ .+..|    ..+++++.+||.+||..||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          228 IGNDKQGQMIVFHLIELLKNNGRLPRP----DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HCTTCCTHHHHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hcCccccchhHHHHHHHHhccCcCCCC----cCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             00000000111222333322 22232    468999999999999999999999999885

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.5e-35  Score=301.36  Aligned_cols=265  Identities=25%  Similarity=0.311  Sum_probs=171.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEE--EEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEY--AVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~v--AvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||.||+|.+..++..+  |||.+.... ......+.+|++++.++.+||||+++++++.+....+ 
T Consensus        25 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~-  102 (327)
T 1fvr_A           25 NDIKF-QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY-  102 (327)
T ss_dssp             GGCEE-EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE-
T ss_pred             HHccc-eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE-
Confidence            34554 578999999999999999998865  999986432 2234568899999999867999999999997654433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+........+.............+ .
T Consensus       103 --lv------~e~~~-----------------~-~--------------~L~~~l~~~~~~~~~~~~~~~~~~~~~~~-~  141 (327)
T 1fvr_A          103 --LA------IEYAP-----------------H-G--------------NLLDFLRKSRVLETDPAFAIANSTASTLS-S  141 (327)
T ss_dssp             --EE------ECCCT-----------------T-C--------------BHHHHHHTTCHHHHCHHHHHHTTBSCSSC-H
T ss_pred             --EE------EecCC-----------------C-C--------------CHHHHHHhcccccccccccccccccccCC-H
Confidence              11      11110                 0 0              00000000000000000000000000000 0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..+|                        .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       142 ~~~~------------------------~i~~q---i~~aL~~LH--~~~ivH~dlkp~NIl~~---~~~~~kL~Dfg~~  189 (327)
T 1fvr_A          142 QQLL------------------------HFAAD---VARGMDYLS--QKQFIHRDLAARNILVG---ENYVAKIADFGLS  189 (327)
T ss_dssp             HHHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---GGGCEEECCTTCE
T ss_pred             HHHH------------------------HHHHH---HHHHHHHHH--hCCccCCCCccceEEEc---CCCeEEEcccCcC
Confidence            0011                        02333   667778888  99999999999999994   4457999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      +......         ......+|+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+        
T Consensus       190 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------  246 (327)
T 1fvr_A          190 RGQEVYV---------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------  246 (327)
T ss_dssp             ESSCEEC---------CC----CCTTTCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--------
T ss_pred             ccccccc---------cccCCCCCccccChhhhcc------ccCCchhcchHHHHHHHHHHcCCCCCCCCCc--------
Confidence            7432211         1123467899999999863      458899999999999999998 999998753        


Q ss_pred             CccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        363 GETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ...+...+..+. +..+    ..+++++++||.+||..||.+|||++|+++|
T Consensus       247 -------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          247 -------CAELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             -------HHHHHHHGGGTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------HHHHHHHhhcCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                   233555565542 2222    3689999999999999999999999999976

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.9e-35  Score=295.32  Aligned_cols=266  Identities=16%  Similarity=0.159  Sum_probs=167.6

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeee-ccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYY-EDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~-~~~~~~~  122 (539)
                      .+.+.|++ .+.||+|+||.||+|.+..+++.||||++.....  ...+.+|++++..+. |+|++..+.++ .++...+
T Consensus         6 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~~~   81 (296)
T 4hgt_A            6 RVGNRYRL-GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             -----CEE-EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHT-TSTTCCCEEEEEEETTEEE
T ss_pred             ccCCceEE-eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhc-CCCCCCeeeeecCCCCceE
Confidence            35567776 5789999999999999999999999998754322  235778999999886 65555555444 3322111


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +                      +.++. + +              .+...           +..    .....+.
T Consensus        82 ----l----------------------v~e~~-~-~--------------~L~~~-----------~~~----~~~~~~~  104 (296)
T 4hgt_A           82 ----M----------------------VMELL-G-P--------------SLEDL-----------FNF----CSRKFSL  104 (296)
T ss_dssp             ----E----------------------EEECC-C-C--------------BHHHH-----------HHH----TTSCCCH
T ss_pred             ----E----------------------EEEcc-C-C--------------CHHHH-----------HHH----hcCCCCH
Confidence                1                      11111 0 0              00000           000    0000000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       .+++                        .+..+   ++.++.|+|  ++||+||||||+|||+...+..+.+||+|||+
T Consensus       105 -~~~~------------------------~i~~q---i~~~l~~LH--~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~  154 (296)
T 4hgt_A          105 -KTVL------------------------LLADQ---MISRIEYIH--SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  154 (296)
T ss_dssp             -HHHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred             -HHHH------------------------HHHHH---HHHHHHHHH--HCCeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence             0000                        03334   667788888  99999999999999995444456799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++......... ..........+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+..+..   
T Consensus       155 a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---  224 (296)
T 4hgt_A          155 AKKYRDARTHQ-HIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR---  224 (296)
T ss_dssp             CEECBCTTTCC-BCCCCCSCCCCSCGGGCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS---
T ss_pred             ceeccCcccCc-cCCCCcccccCCCccccchHHhcC------CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh---
Confidence            97654322110 000012235689999999999863      46899999999999999999999999875432210   


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                               .....+.......|. ..+..+++++++||.+||..||++|||++++++
T Consensus       225 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          225 ---------QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ---------SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ---------hhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                     012222222222221 112457899999999999999999999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=3.1e-35  Score=294.01  Aligned_cols=266  Identities=16%  Similarity=0.171  Sum_probs=171.8

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||.||+|++..+++.||||++.....  ..++.+|+.++..+. |+|++..+.++.......  
T Consensus         7 ~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~~--   80 (296)
T 3uzp_A            7 VGNRYRL-GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQ-GGVGIPTIRWCGAEGDYN--   80 (296)
T ss_dssp             ETTTEEE-EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHT-TSTTCCCEEEEEEETTEE--
T ss_pred             eccEEEE-EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhh-cCCCCCccccccCCCCce--
Confidence            4566776 5789999999999999999999999999865332  346889999999986 666555554442221111  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                  ++           +.++. + +              .+...           +...    ....+ ..
T Consensus        81 ------------~l-----------v~e~~-~-~--------------~L~~~-----------~~~~----~~~~~-~~  105 (296)
T 3uzp_A           81 ------------VM-----------VMELL-G-P--------------SLEDL-----------FNFC----SRKFS-LK  105 (296)
T ss_dssp             ------------EE-----------EEECC-C-C--------------BHHHH-----------HHHT----TTCCC-HH
T ss_pred             ------------EE-----------EEEec-C-C--------------CHHHH-----------HHhh----ccCCC-HH
Confidence                        00           11111 0 0              00000           0000    00000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++.                        +..+   ++.++.|+|  ++||+||||||+|||+...+..+.+||+|||++.
T Consensus       106 ~~~~------------------------i~~q---i~~~l~~lH--~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A          106 TVLL------------------------LADQ---MISRIEYIH--SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            0000                        2333   667788888  9999999999999999643445679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......... ..........+||+.|+|||++.+      ..|+.++|||||||++|+|++|+.||.+....+.      
T Consensus       157 ~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------  223 (296)
T 3uzp_A          157 KYRDARTHQ-HIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK------  223 (296)
T ss_dssp             ECBCTTTCC-BCCCCCSCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS------
T ss_pred             ccccccccc-ccccccccccccccccCChhhhcC------CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh------
Confidence            554322110 000011245689999999999863      4688999999999999999999999987543221      


Q ss_pred             cchhhHHHHHHHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            ...+..+......+|. ..+..+++++.+||.+||..||.+|||++++++
T Consensus       224 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          224 ------RQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ------SSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ------hhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                  0122222222222221 112467999999999999999999999998875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.2e-35  Score=299.06  Aligned_cols=269  Identities=24%  Similarity=0.323  Sum_probs=173.6

Q ss_pred             cchhcccCceeceeCceEEEEEEEc-------cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNI-------LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~-------~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      .+.|++ .+.||+|+||.||+|.+.       .++..||||++..... .....+.+|++++..+.+||||+++++++.+
T Consensus        34 ~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           34 RDKLTL-GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             GGGEEE-EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HhHeEE-eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            345665 578999999999999976       4667899999965322 2345688999999998679999999999876


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|      +|.+-    +.    .|.+     .+.....             .+. .+.. . .....    
T Consensus       113 ~~~~~---lv------~e~~~----~~----~L~~-----~l~~~~~-------------~~~-~~~~-~-~~~~~----  150 (334)
T 2pvf_A          113 DGPLY---VI------VEYAS----KG----NLRE-----YLRARRP-------------PGM-EYSY-D-INRVP----  150 (334)
T ss_dssp             SSCCE---EE------EECCT----TC----BHHH-----HHHTTSC-------------TTC-CSCC------------
T ss_pred             CCceE---EE------EECCC----CC----cHHH-----HHHHhcc-------------ccc-cccc-c-ccccc----
Confidence            54332   11      11100    00    0000     0000000             000 0000 0 00000    


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                            ...++...++.                  +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||
T Consensus       151 ------~~~~~~~~~~~------------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~~~kL  198 (334)
T 2pvf_A          151 ------EEQMTFKDLVS------------------CTYQ---LARGMEYLA--SQKCIHRDLAARNVLVT---ENNVMKI  198 (334)
T ss_dssp             --------CCCHHHHHH------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEE
T ss_pred             ------cccCCHHHHHH------------------HHHH---HHHHHHHHH--hCCeeCCCCccceEEEc---CCCCEEE
Confidence                  00001111110                  2233   667788888  99999999999999994   4456999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGE  356 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~  356 (539)
                      +|||+++........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+  
T Consensus       199 ~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~--  264 (334)
T 2pvf_A          199 ADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--  264 (334)
T ss_dssp             CCCTTCEECTTTSSE------ECCSCCCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred             ccccccccccccccc------cccCCCCcccceeChHHhcC------CCcChHHHHHHHHHHHHHHHhCCCCCcCcCC--
Confidence            999998754322110      01123467899999999863      458899999999999999999 999997653  


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                   ...+...+..+. ...+    ..++.++++||.+||..||.+|||++|++++
T Consensus       265 -------------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          265 -------------VEELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             -------------HHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------------HHHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                         233555555543 2222    4689999999999999999999999999865

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-35  Score=293.18  Aligned_cols=255  Identities=20%  Similarity=0.298  Sum_probs=174.1

Q ss_pred             chhcccCceeceeCceEEEEEEEc--cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI--LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|.+.++.||+|+||.||+|...  .++..||||++..... .....+.+|++++..+ +||||++++++++.+.. + 
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~-~-   85 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEAL-M-   85 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEESSSE-E-
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEecCCCc-E-
Confidence            445555568999999999999854  4678899999975432 2345688999999997 69999999999844321 1 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         +                      +.++--+ +              .+...+..               .....+ .
T Consensus        86 ---l----------------------v~e~~~~-~--------------~L~~~l~~---------------~~~~~~-~  109 (287)
T 1u59_A           86 ---L----------------------VMEMAGG-G--------------PLHKFLVG---------------KREEIP-V  109 (287)
T ss_dssp             ---E----------------------EEECCTT-E--------------EHHHHHTT---------------CTTTSC-H
T ss_pred             ---E----------------------EEEeCCC-C--------------CHHHHHHh---------------CCccCC-H
Confidence               1                      1111000 0              00000000               000000 0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      ..+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++
T Consensus       110 ~~~~~------------------------~~~q---i~~~l~~lH--~~~i~H~dlkp~Nili~~---~~~~kl~Dfg~~  157 (287)
T 1u59_A          110 SNVAE------------------------LLHQ---VSMGMKYLE--EKNFVHRDLAARNVLLVN---RHYAKISDFGLS  157 (287)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEEE---TTEEEECCCTTC
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHH--HCCEeeCCCchheEEEcC---CCCEEECcccce
Confidence            00110                        2333   667788888  999999999999999954   356999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      ..........     .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+.       
T Consensus       158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------  219 (287)
T 1u59_A          158 KALGADDSYY-----TARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-------  219 (287)
T ss_dssp             EECTTCSCEE-----CCCCSSCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-------
T ss_pred             eeeccCccee-----eccccccccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-------
Confidence            7553322110     01224467999999999863      468899999999999999998 9999976532       


Q ss_pred             CccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        363 GETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                              ..+...+..+. ..+|    ..+++++.+||.+||..||.+||++.++++|.|
T Consensus       220 --------~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          220 --------PEVMAFIEQGKRMECP----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             --------HHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             --------HHHHHHHhcCCcCCCC----CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence                    23445555553 3333    368999999999999999999999999998854

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.3e-35  Score=291.29  Aligned_cols=251  Identities=21%  Similarity=0.278  Sum_probs=173.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+..++..||||++... ......+.+|++++..+ +||||+++++++.+....+    
T Consensus        13 ~~~~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~----   85 (288)
T 3kfa_A           13 TDITM-KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFY----   85 (288)
T ss_dssp             GGEEE-EEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEE----
T ss_pred             cceeE-EeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEE----
Confidence            34554 46899999999999999999999999999643 23456788999999997 5999999999987654332    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      +.++.-+ +              .+...           +...   .....+ ...+
T Consensus        86 ~----------------------v~e~~~~-~--------------~L~~~-----------~~~~---~~~~~~-~~~~  113 (288)
T 3kfa_A           86 I----------------------ITEFMTY-G--------------NLLDY-----------LREC---NRQEVS-AVVL  113 (288)
T ss_dssp             E----------------------EEECCTT-E--------------EHHHH-----------HHHC---CTTTSC-HHHH
T ss_pred             E----------------------EEEcCCC-C--------------cHHHH-----------HHhc---ccCCcc-HhHH
Confidence            1                      1111000 0              00000           0000   000000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       114 ~---~---------------------i~~~---i~~~l~~lH--~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A          114 L---Y---------------------MATQ---ISSAMEYLE--KKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM  161 (288)
T ss_dssp             H---H---------------------HHHH---HHHHHHHHH--HHTCCCSCCSGGGEEEC---GGGCEEECCCCGGGTS
T ss_pred             H---H---------------------HHHH---HHHHHHHHH--HCCccCCCCCcceEEEc---CCCCEEEccCccceec
Confidence            0   0                     2233   667778888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .....       .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+..         
T Consensus       162 ~~~~~-------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---------  219 (288)
T 3kfa_A          162 TGDTY-------TAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---------  219 (288)
T ss_dssp             CSSSS-------EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------
T ss_pred             cCCcc-------ccccCCccccCcCChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---------
Confidence            32211       11234567899999999874      468899999999999999999 99999875421         


Q ss_pred             chhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                            .+...+... ....|    ..+++++++||.+||..||.+|||++|+++.
T Consensus       220 ------~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          220 ------QVYELLEKDYRMERP----EGCPEKVYELMRACWQWNPSDRPSFAEIHQA  265 (288)
T ss_dssp             ------GHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------HHHHHHhccCCCCCC----CCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence                  133344333 22222    4689999999999999999999999999853

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=7e-36  Score=303.51  Aligned_cols=273  Identities=21%  Similarity=0.198  Sum_probs=167.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||+|+||.||+|++.  ++.||||++.... .......+|+.++.++ +|||||++++++.+......    
T Consensus        25 ~y~~-~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~----   95 (322)
T 3soc_A           25 PLQL-LEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDV----   95 (322)
T ss_dssp             EEEE-EEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE----
T ss_pred             hchh-hheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCc----
Confidence            4554 578999999999999764  7899999996432 2234456688888876 59999999999876432110    


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                             ...+           +.+|.-+ +              .+...+.... +..+                 .++
T Consensus        96 -------~~~l-----------v~e~~~~-g--------------~L~~~l~~~~-~~~~-----------------~~~  124 (322)
T 3soc_A           96 -------DLWL-----------ITAFHEK-G--------------SLSDFLKANV-VSWN-----------------ELC  124 (322)
T ss_dssp             -------EEEE-----------EEECCTT-C--------------BHHHHHHHCC-BCHH-----------------HHH
T ss_pred             -------eEEE-----------EEecCCC-C--------------CHHHHHHhcC-CCHH-----------------HHH
Confidence                   0001           1111100 0              0000000000 0000                 000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh----------CCCCCCCCCCceeecCCCCCCCcee
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ----------GIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~----------gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                                              .+..|   ++.++.|+|  ++          ||+||||||+|||+.   ..+.+||
T Consensus       125 ------------------------~i~~q---i~~al~~LH--~~~~~l~~~~~~~ivH~Dlkp~Nill~---~~~~~kL  172 (322)
T 3soc_A          125 ------------------------HIAET---MARGLAYLH--EDIPGLKDGHKPAISHRDIKSKNVLLK---NNLTACI  172 (322)
T ss_dssp             ------------------------HHHHH---HHHHHHHHT--CCEEEETTEEECEEECSCCSGGGEEEC---TTCCEEE
T ss_pred             ------------------------HHHHH---HHHHHHHHH--hhccccccccCCCEEeCCCChHhEEEC---CCCeEEE
Confidence                                    02333   667788888  77          999999999999994   4467999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||+++........      ......+||+.|+|||++.+... ....|+.++|||||||++|+|++|.+||.+.....
T Consensus       173 ~DFg~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  245 (322)
T 3soc_A          173 ADFGLALKFEAGKSA------GDTHGQVGTRRYMAPEVLEGAIN-FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY  245 (322)
T ss_dssp             CCCTTCEEECTTSCC------CCCTTCCCCGGGCCHHHHTTCCC-CCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred             ccCCcccccccccCc------cccccCccCccccCHhhcccccc-cCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence            999999754332211      12335689999999999864110 01245668899999999999999999998765432


Q ss_pred             CCcccCc-cchhhHHHHHHHHhcCCCCCC-CCCCCC--CCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        358 CGWQRGE-TCHACQEILFHSIQQGHYDFP-EGEWST--ISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       358 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~p-~~~~~~--~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ....... ........+...+........ ...|..  .++++.+||.+||..||++|||++|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            1110000 000011223333332222111 111221  2456999999999999999999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.3e-36  Score=308.72  Aligned_cols=145  Identities=17%  Similarity=0.157  Sum_probs=104.4

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCC-----------------CCCceeccCCCccccccCCCCCCCCCCCCcc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQ-----------------LSPVKLCDFDLGSGIKFNTSVHSPLATPLLL  302 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-----------------~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~  302 (539)
                      ++.++.|+| +++||+||||||+|||+..++.                 ...+||+|||+|+....             .
T Consensus       170 i~~aL~~lH-~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------------~  235 (336)
T 2vuw_A          170 LTASLAVAE-ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------------G  235 (336)
T ss_dssp             HHHHHHHHH-HHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------T
T ss_pred             HHHHHHHHH-HhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------C
Confidence            566666666 2689999999999999975431                 12699999999985432             1


Q ss_pred             ccccCcccccchhhcccCCCCCCCCCcccchhhhhHH-HHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhc-C
Q psy16343        303 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVV-VYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ-G  380 (539)
Q Consensus       303 t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvi-ly~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~  380 (539)
                      +.+||+.|||||++.+      . ++.++||||+|++ .++++.|..||.+..     |         ...+...+.. .
T Consensus       236 ~~~gt~~y~aPE~~~g------~-~~~~~Diwsl~~~~~~~~~~g~~p~~~~~-----~---------~~~~~~~~~~~~  294 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTG------D-GDYQFDIYRLMKKENNNRWGEYHPYSNVL-----W---------LHYLTDKMLKQM  294 (336)
T ss_dssp             EEECCCCTTCSGGGCC------C-SSHHHHHHHHHHHHHTTCTTSCCTHHHHH-----H---------HHHHHHHHHHTC
T ss_pred             cEEEeecccChhhhcC------C-CccceehhhhhCCCCcccccccCCCcchh-----h---------hhHHHHhhhhhh
Confidence            4589999999999963      2 3779999998777 888999999995310     0         0112222221 1


Q ss_pred             C--CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh-cCCCcc
Q psy16343        381 H--YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL-KHPWIS  424 (539)
Q Consensus       381 ~--~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l-~Hpw~~  424 (539)
                      .  ...+...|..+|++++|||++||++|     ||+|+| +||||+
T Consensus       295 ~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          295 TFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             CCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            1  11222234568999999999999987     999999 999994

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.1e-35  Score=303.65  Aligned_cols=279  Identities=15%  Similarity=0.139  Sum_probs=170.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccC--------CcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILT--------ELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t--------~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      .+.|++ .+.||+|+||.||+|.+..+        ++.||||++.+.     ..+.+|++++.++ .||||+++++.+..
T Consensus        41 ~~~y~~-~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l-~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKL-KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRA-AKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEE-EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHH-CCHHHHHHHHHHTT
T ss_pred             CCeEEE-EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHh-cccchhhhhhhhcc
Confidence            456776 57899999999999999874        789999999653     3578999999997 59999998766543


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      .....    +      +.-+-..........-+.++. + +              .+...           +...   ..
T Consensus       114 ~~~~~----i------~~~~~~~~~~~~~~~lv~e~~-~-~--------------~L~~~-----------l~~~---~~  153 (352)
T 2jii_A          114 TPLLA----I------PTCMGFGVHQDKYRFLVLPSL-G-R--------------SLQSA-----------LDVS---PK  153 (352)
T ss_dssp             CTTCS----C------CCCCEEEEETTTEEEEEEECC-C-E--------------EHHHH-----------HHHS---GG
T ss_pred             CCccC----c------cchhhccccCCcEEEEEecCC-C-c--------------CHHHH-----------HHhC---Cc
Confidence            22110    0      000000000000000111211 0 0              00000           0000   00


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      ...       +...+                  ..+..|   ++.++.|+|  ++||+||||||+|||+..++ ...+||
T Consensus       154 ~~l-------~~~~~------------------~~i~~q---i~~~L~~LH--~~~ivH~Dikp~NIl~~~~~-~~~~kl  202 (352)
T 2jii_A          154 HVL-------SERSV------------------LQVACR---LLDALEFLH--ENEYVHGNVTAENIFVDPED-QSQVTL  202 (352)
T ss_dssp             GCC-------CHHHH------------------HHHHHH---HHHHHHHHH--HTTCBCSCCCGGGEEEETTE-EEEEEE
T ss_pred             CCC-------CHHHH------------------HHHHHH---HHHHHHHHH--hCCccCCCCCHHHEEEcCCC-CceEEE
Confidence            000       00000                  013334   667788888  89999999999999996432 126999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||+++......... ..........+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+.....
T Consensus       203 ~Dfg~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  275 (352)
T 2jii_A          203 AGYGFAFRYCPSGKHV-AYVEGSRSPHEGDLEFISMDLHKG------CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT  275 (352)
T ss_dssp             CCGGGCBCSSGGGCCC-CCCTTSSCTTCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             ecCcceeeccCCCccc-cccccccccccCCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence            9999997654322110 001112235689999999999863      468999999999999999999999998653211


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCC--CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPE--GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~--~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                .........+......++.  ..|..+++++++||.+||..||.+|||++++++
T Consensus       276 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          276 ----------EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             ----------HHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----------HHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                      0011112222233333322  235678999999999999999999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-34  Score=287.70  Aligned_cols=249  Identities=21%  Similarity=0.257  Sum_probs=166.2

Q ss_pred             CceeceeCceEEEEEEEccCCc---EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTEL---EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      +++||+|+||.||+|.+..++.   .||+|++.+... .....+.+|++++..+ +||||+++++++.+.....   .+ 
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---~~-  100 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLP---HV-  100 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCC---EE-
T ss_pred             CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCc---EE-
Confidence            5789999999999999766554   799999975432 2345678999999987 5999999999987654321   01 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                               +            .++--+ +              .+...+..               ..... ....++.
T Consensus       101 ---------v------------~e~~~~-~--------------~L~~~~~~---------------~~~~~-~~~~~~~  128 (298)
T 3pls_A          101 ---------L------------LPYMCH-G--------------DLLQFIRS---------------PQRNP-TVKDLIS  128 (298)
T ss_dssp             ---------E------------ECCCTT-C--------------BHHHHHHC---------------TTCCC-BHHHHHH
T ss_pred             ---------E------------EecccC-C--------------CHHHHHhc---------------cccCC-CHHHHHH
Confidence                     1            111000 0              00000000               00000 0000110


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                              +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++....
T Consensus       129 ------------------------i~~q---i~~~l~~LH--~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          129 ------------------------FGLQ---VARGMEYLA--EQKFVHRDLAARNCMLD---ESFTVKVADFGLARDILD  176 (298)
T ss_dssp             ------------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTCCEEECCTTSSCTTTT
T ss_pred             ------------------------HHHH---HHHHHHHHH--hCCcccCCCCcceEEEc---CCCcEEeCcCCCcccccC
Confidence                                    2233   667788888  99999999999999994   445799999999975432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC-CCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY-PPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~-~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .....    ........||+.|+|||++.+      ..|+.++|||||||++|+|++|. +||.+.+.            
T Consensus       177 ~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~------------  234 (298)
T 3pls_A          177 REYYS----VQQHRHARLPVKWTALESLQT------YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP------------  234 (298)
T ss_dssp             GGGGC----SCCSSCTTCGGGGSCHHHHTT------CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG------------
T ss_pred             Ccccc----cccCcCCCCCccccChhhhcc------CCCChhhchhhHHHHHHHHhhCCCCCCccCCH------------
Confidence            21100    112235678999999999863      46889999999999999999955 55544321            


Q ss_pred             hhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                         ..+...+..+. ...+    ..+++++.+||.+||..||.+|||++++++
T Consensus       235 ---~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          235 ---FDLTHFLAQGRRLPQP----EYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ---GGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---HHHHHHhhcCCCCCCC----ccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence               12334444443 2222    357999999999999999999999999885

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=3.3e-35  Score=294.45  Aligned_cols=271  Identities=22%  Similarity=0.266  Sum_probs=165.6

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhh-cCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHC-QGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~-~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.+.|++ .+.||+|+||.||+|..  +++.||||++...   ....+.+|.+++... .+||||+++++++.+.....
T Consensus         5 ~~~~~y~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~   78 (301)
T 3q4u_A            5 TVARDITL-LECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS   78 (301)
T ss_dssp             CCGGGCEE-EEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred             cccCcEEE-EEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence            35667776 57899999999999986  7899999998642   345667788877763 37999999998865432110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                  ..+.+          +.+|.-+ +              .+...+..                 ...+ 
T Consensus        79 ------------~~~~l----------v~e~~~~-g--------------~L~~~l~~-----------------~~~~-  103 (301)
T 3q4u_A           79 ------------TQLWL----------ITHYHEM-G--------------SLYDYLQL-----------------TTLD-  103 (301)
T ss_dssp             ------------EEEEE----------EECCCTT-C--------------BHHHHHTT-----------------CCBC-
T ss_pred             ------------ceeEE----------ehhhccC-C--------------CHHHHHhh-----------------cccC-
Confidence                        00000          1111000 0              00000000                 0000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhh------hhCCCCCCCCCCceeecCCCCCCCce
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI------QQGIAHRDLKPENILCVHPDQLSPVK  276 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h------~~gIvHRDlKpeNiL~~~~~~~~~ik  276 (539)
                      ...+|   -                     +..+   ++.++.|+|..      ++||+||||||+|||+.   ..+.+|
T Consensus       104 ~~~~~---~---------------------i~~~---i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~~~~~k  153 (301)
T 3q4u_A          104 TVSCL---R---------------------IVLS---IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQCC  153 (301)
T ss_dssp             HHHHH---H---------------------HHHH---HHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---TTSCEE
T ss_pred             HHHHH---H---------------------HHHH---HHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---CCCCEE
Confidence            00000   0                     2223   55666777632      78999999999999994   445799


Q ss_pred             eccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC----------
Q psy16343        277 LCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG----------  346 (539)
Q Consensus       277 l~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G----------  346 (539)
                      |+|||+++.........    .....+.+||+.|+|||++..........|+.++|||||||++|+|++|          
T Consensus       154 l~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~  229 (301)
T 3q4u_A          154 IADLGLAVMHSQSTNQL----DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY  229 (301)
T ss_dssp             ECCCTTCEEEETTTTEE----ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             EeeCCCeeecccccccc----cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence            99999987543322110    0012345899999999999641100000345689999999999999999          


Q ss_pred             CCCCCCCCCCCCCcccCccchhhHHHHHHHHhcC--CCCCCCCC-CCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        347 YPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--HYDFPEGE-WSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       347 ~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~-~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      .+||.+....+..          ...+...+...  ...+|... ....++++.+||.+||..||.+|||++|+++
T Consensus       230 ~~pf~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          230 KPPFYDVVPNDPS----------FEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CCTTTTTSCSSCC----------HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cccccccCCCCcc----------hhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            8888765332211          11222222211  22222110 1224578999999999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.7e-35  Score=324.46  Aligned_cols=245  Identities=19%  Similarity=0.299  Sum_probs=166.3

Q ss_pred             CceeceeCceEEEEEEE--ccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVN--ILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~--~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|..  ..+++.||||+++....  .....+.+|+++|.++ +|||||+++++++++.. +    + 
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~-~----l-  446 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEAESW-M----L-  446 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEESSSE-E----E-
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCE-E----E-
Confidence            35799999999999954  45678899999965322  2356789999999997 59999999999865321 1    1 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                           +.+|--+ +              .+...+.....+..+                 .+  
T Consensus       447 ---------------------v~E~~~~-g--------------~L~~~l~~~~~l~~~-----------------~~--  471 (635)
T 4fl3_A          447 ---------------------VMEMAEL-G--------------PLNKYLQQNRHVKDK-----------------NI--  471 (635)
T ss_dssp             ---------------------EEECCTT-E--------------EHHHHHHHCTTCCHH-----------------HH--
T ss_pred             ---------------------EEEccCC-C--------------CHHHHHhhCCCCCHH-----------------HH--
Confidence                                 1111000 0              000000000000000                 00  


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                           .                 .+..+   ++.++.|+|  ++|||||||||+|||+..   .+.+||+|||+++.+..
T Consensus       472 -----~-----------------~i~~q---i~~~L~yLH--~~~iiHrDLkp~NILl~~---~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          472 -----I-----------------ELVHQ---VSMGMKYLE--ESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRA  521 (635)
T ss_dssp             -----H-----------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEEE---TTEEEECCTTHHHHTTC
T ss_pred             -----H-----------------HHHHH---HHHHHHHHH--HCCEeCCCCChHhEEEeC---CCCEEEEEcCCcccccc
Confidence                 0                 02333   677888888  999999999999999954   35699999999876543


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .....     .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+             
T Consensus       522 ~~~~~-----~~~~~~~~t~~y~APE~~~~------~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-------------  577 (635)
T 4fl3_A          522 DENYY-----KAQTHGKWPVKWYAPECINY------YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-------------  577 (635)
T ss_dssp             ------------------CGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-------------
T ss_pred             Ccccc-----ccccCCCCceeeeChhhhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-------------
Confidence            22111     01223467899999999974      468999999999999999998 999998754             


Q ss_pred             hhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                        ...+...+..+. ..+|    ..+++++.+||.+||..||++||+++++++
T Consensus       578 --~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          578 --GSEVTAMLEKGERMGCP----AGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             --HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --HHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence              233556666553 2333    368999999999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=4.2e-35  Score=296.98  Aligned_cols=263  Identities=18%  Similarity=0.241  Sum_probs=174.3

Q ss_pred             cchhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .+.|++ .+.||+|+||.||+|.+.     .++..||||++.+... .....+.+|+.++..+ +||||+++++++.+..
T Consensus        24 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~  101 (322)
T 1p4o_A           24 REKITM-SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQ  101 (322)
T ss_dssp             GGGEEE-EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSS
T ss_pred             hhheee-eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCC
Confidence            455665 578999999999999876     4678899999965332 2234678999999987 5999999999987654


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+    +                      +.++--+ +              .+...+...   .+. ...     ...
T Consensus       102 ~~~----l----------------------v~e~~~~-~--------------~L~~~l~~~---~~~-~~~-----~~~  131 (322)
T 1p4o_A          102 PTL----V----------------------IMELMTR-G--------------DLKSYLRSL---RPA-MAN-----NPV  131 (322)
T ss_dssp             SCE----E----------------------EEECCTT-C--------------BHHHHHHHH---HHH-HHH-----CTT
T ss_pred             ccE----E----------------------EEEeCCC-C--------------cHHHHHHHh---chh-hcc-----CCC
Confidence            322    1                      1111000 0              000000000   000 000     000


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      .    ...+...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|
T Consensus       132 ~----~~~~~~~~~------------------~i~~q---i~~~l~~lH--~~~i~H~dikp~NIli~---~~~~~kl~D  181 (322)
T 1p4o_A          132 L----APPSLSKMI------------------QMAGE---IADGMAYLN--ANKFVHRDLAARNCMVA---EDFTVKIGD  181 (322)
T ss_dssp             C----CCCCHHHHH------------------HHHHH---HHHHHHHHH--HTTCBCSCCSGGGEEEC---TTCCEEECC
T ss_pred             C----CCcCHHHHH------------------HHHHH---HHHHHHHHH--HCCCccCCCccceEEEc---CCCeEEECc
Confidence            0    000000000                  02233   667777888  99999999999999995   445799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+++........      ......+||+.|+|||++.+      ..|+.++|||||||++|+|++ |.+||.+.+    
T Consensus       182 fg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~----  245 (322)
T 1p4o_A          182 FGMTRDIYETDYY------RKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPYQGLS----  245 (322)
T ss_dssp             TTCCCGGGGGGCE------EGGGSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----
T ss_pred             Ccccccccccccc------ccccCCCCCCCccChhhhcc------CCCCchhhHHHHHHHHHHHHhcCCCccccCC----
Confidence            9998754322110      01234578999999999874      468899999999999999999 899997653    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 ...+...+..+......   ..+++++++||.+||..||.+|||+.|+++|
T Consensus       246 -----------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          246 -----------NEQVLRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             -----------HHHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                       23345555555432211   3689999999999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=9.2e-35  Score=293.23  Aligned_cols=245  Identities=25%  Similarity=0.447  Sum_probs=159.7

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||+|+||.||+|..  .++.||||++...  .....+.+|++++.++ +||||+++++++.+.  .+    +
T Consensus         9 ~~~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~--~~----l   76 (307)
T 2eva_A            9 EIEV-EEVVGRGAFGVVCKAKW--RAKDVAIKQIESE--SERKAFIVELRQLSRV-NHPNIVKLYGACLNP--VC----L   76 (307)
T ss_dssp             GEEE-EEEEECCSSSEEEEEEE--TTEEEEEEECSST--THHHHHHHHHHHHHHC-CCTTBCCEEEBCTTT--TE----E
T ss_pred             Heee-eeEeecCCCceEEEEEE--CCeeEEEEEecCh--hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCC--cE----E
Confidence            3554 57899999999999986  4788999998642  3456788999999997 599999999987632  11    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            +.++.-+ +              .+...+....-     .        ..+ ....++
T Consensus        77 ----------------------v~e~~~~-~--------------~L~~~l~~~~~-----~--------~~~-~~~~~~  105 (307)
T 2eva_A           77 ----------------------VMEYAEG-G--------------SLYNVLHGAEP-----L--------PYY-TAAHAM  105 (307)
T ss_dssp             ----------------------EEECCTT-C--------------BHHHHHHCSSS-----E--------ECC-CHHHHH
T ss_pred             ----------------------EEEcCCC-C--------------CHHHHHhccCC-----C--------Ccc-CHHHHH
Confidence                                  1111000 0              00000000000     0        000 000011


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh---hCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ---QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~---~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .                        |..+   ++.++.|+|  +   +||+||||||+|||+..++  ..+||+|||++.
T Consensus       106 ~------------------------~~~q---i~~~l~~LH--~~~~~~ivH~dlkp~NIll~~~~--~~~kl~Dfg~~~  154 (307)
T 2eva_A          106 S------------------------WCLQ---CSQGVAYLH--SMQPKALIHRDLKPPNLLLVAGG--TVLKICDFGTAC  154 (307)
T ss_dssp             H------------------------HHHH---HHHHHHHHH--TCSSSCCCCCCCSGGGEEEETTT--TEEEECCCCC--
T ss_pred             H------------------------HHHH---HHHHHHHHH--hCCCCCeecCCCChhHEEEeCCC--CEEEEccccccc
Confidence            0                        2223   667788888  6   8999999999999996432  237999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .....           ....+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||......        
T Consensus       155 ~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------  209 (307)
T 2eva_A          155 DIQTH-----------MTNNKGSAAWMAPEVFEG------SNYSEKCDVFSWGIILWEVITRRKPFDEIGGP--------  209 (307)
T ss_dssp             ---------------------CCTTSSCHHHHTC------CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS--------
T ss_pred             ccccc-----------cccCCCCCceEChhhhCC------CCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc--------
Confidence            54321           124579999999999863      46899999999999999999999999754321        


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ...+...+..+..   ......+++++++||.+||..||.+|||++++++
T Consensus       210 -----~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          210 -----AFRIMWAVHNGTR---PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             -----HHHHHHHHHTTCC---CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----HHHHHHHHhcCCC---CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                 1122233333321   1122468999999999999999999999999987

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.7e-35  Score=305.82  Aligned_cols=162  Identities=19%  Similarity=0.151  Sum_probs=110.6

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+... ..+.+||+|||+++.+...... ...........+||+.|+|||++.+ 
T Consensus       161 i~~~l~~lH--~~~iiHrDlkp~Nill~~~-~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~-  235 (364)
T 3op5_A          161 ILDILEYIH--EHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH-KAYAADPKRCHDGTIEFTSIDAHNG-  235 (364)
T ss_dssp             HHHHHHHHH--HTTEECCCCCGGGEEEESS-CTTCEEECCCTTCEESSGGGCC-CCSSCCSSCCCCCCTTTCCHHHHTT-
T ss_pred             HHHHHHHHH--HCCeEEecCCHHHEEEecC-CCCeEEEEECCcceecccCCcc-cccccCcccccCCCCCccCHHHhCC-
Confidence            677788888  8999999999999999632 3467999999999755432211 1111112245679999999999863 


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDL  399 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dl  399 (539)
                           ..|+.++|||||||++|+|++|..||.+...........  ....... ...+...  .++.   ..+++++.+|
T Consensus       236 -----~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~--~~~~~~~-~~~~~~~--~~~~---~~~~~~~~~l  302 (364)
T 3op5_A          236 -----VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDS--KIRYREN-IASLMDK--CFPA---ANAPGEIAKY  302 (364)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHH--HHHHHHC-HHHHHHH--HSCT---TCCCHHHHHH
T ss_pred             -----CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHH--HHHhhhh-HHHHHHH--hccc---ccCHHHHHHH
Confidence                 468999999999999999999999998643211000000  0000000 0000000  1111   3578999999


Q ss_pred             HHHhccccccCCCCHHHHhc
Q psy16343        400 IRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       400 i~~lL~~dP~~R~ta~e~l~  419 (539)
                      |.+||..||.+||+++++++
T Consensus       303 i~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          303 METVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhcCCCCCCCCHHHHHH
Confidence            99999999999999998874

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-34  Score=285.50  Aligned_cols=250  Identities=17%  Similarity=0.244  Sum_probs=172.5

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+. ++..||||++.... .....+.+|++++..+ +||||+++++++.+....+   .
T Consensus         8 ~~y~~-~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~---l   80 (267)
T 3t9t_A            8 SELTF-VQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPIC---L   80 (267)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEET-TTEEEEEEEECTTT-BCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCE---E
T ss_pred             hheee-eeEecCCCceeEEEEEec-CCCeEEEEEccccC-CCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeE---E
Confidence            34554 478999999999999986 67789999997543 2456789999999997 5999999999987654322   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-                 + +              .+...           +..    .....+ ...+
T Consensus        81 v------~e~~~-----------------~-~--------------~L~~~-----------~~~----~~~~~~-~~~~  106 (267)
T 3t9t_A           81 V------TEFME-----------------H-G--------------CLSDY-----------LRT----QRGLFA-AETL  106 (267)
T ss_dssp             E------ECCCT-----------------T-C--------------BHHHH-----------HHH----TTTCCC-HHHH
T ss_pred             E------EeCCC-----------------C-C--------------cHHHH-----------Hhh----CcccCC-HHHH
Confidence            1      11100                 0 0              00000           000    000000 0001


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       107 ~~------------------------~~~~---i~~~l~~lH--~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A          107 LG------------------------MCLD---VCEGMAYLE--EACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             HH------------------------HHHH---HHHHHHHHH--HTTCCCSSCCGGGEEEC---GGGCEEECCTTGGGGB
T ss_pred             HH------------------------HHHH---HHHHHHHHH--hCCcccCCCchheEEEC---CCCCEEEccccccccc
Confidence            10                        2233   667778888  99999999999999994   4456999999998754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......||+.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.+.+           
T Consensus       155 ~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------  210 (267)
T 3t9t_A          155 LDDQYT-------SSTGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----------  210 (267)
T ss_dssp             CCHHHH-------STTSTTCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------
T ss_pred             cccccc-------ccccccccccccChhhhcC------CCccchhchhhhHHHHHHHhccCCCCCCCCC-----------
Confidence            221100       1123468899999999963      468899999999999999999 899997653           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                          ...+...+..+.....+   ...++++++||.+||..||.+|||+++++++
T Consensus       211 ----~~~~~~~i~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          211 ----NSEVVEDISTGFRLYKP---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             ----HHHHHHHHHTTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----HHHHHHHHhcCCcCCCC---ccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                23355566655322222   3579999999999999999999999999865

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=4.8e-35  Score=290.91  Aligned_cols=251  Identities=20%  Similarity=0.262  Sum_probs=167.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEcc---CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNIL---TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~---t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.|.+ .+.||+|+||.||+|....   ++..||||++.+... .....+.+|+.++..+ +||||++++++++++..+
T Consensus        11 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   88 (281)
T 3cc6_A           11 REDVVL-NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEEEPTW   88 (281)
T ss_dssp             GGGEEE-EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECSSSCE
T ss_pred             ccceEE-EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCE
Confidence            345655 5789999999999998654   344699999965422 2346788999999997 599999999988654221


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                           +                      +.++--+ +              .+...           +...    ....+
T Consensus        89 -----~----------------------v~e~~~~-~--------------~L~~~-----------l~~~----~~~~~  111 (281)
T 3cc6_A           89 -----I----------------------IMELYPY-G--------------ELGHY-----------LERN----KNSLK  111 (281)
T ss_dssp             -----E----------------------EEECCTT-C--------------BHHHH-----------HHHH----TTTCC
T ss_pred             -----E----------------------EEecCCC-C--------------CHHHH-----------HHhc----cccCC
Confidence                 1                      1111000 0              00000           0000    00000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                       ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||
T Consensus       112 -~~~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg  158 (281)
T 3cc6_A          112 -VLTLVL------------------------YSLQ---ICKAMAYLE--SINCVHRDIAVRNILVAS---PECVKLGDFG  158 (281)
T ss_dssp             -HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCSGGGEEEEE---TTEEEECCCC
T ss_pred             -HHHHHH------------------------HHHH---HHHHHHHHH--HCCcccCCCccceEEECC---CCcEEeCccC
Confidence             000110                        2233   667788888  999999999999999954   3469999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      ++.........       ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||......    
T Consensus       159 ~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----  221 (281)
T 3cc6_A          159 LSRYIEDEDYY-------KASVTRLPIKWMSPESINF------RRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----  221 (281)
T ss_dssp             GGGCC----------------CCCCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----
T ss_pred             CCccccccccc-------ccccCCCCcceeCchhhcc------CCCCchhccHHHHHHHHHHHhCCCCCcccCChH----
Confidence            98754322110       1124467899999999863      468899999999999999998 99999764321    


Q ss_pred             ccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 .....+..+. ...|    ..+++++.+||.+||..||.+|||+.|++++
T Consensus       222 -----------~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          222 -----------DVIGVLEKGDRLPKP----DLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             -----------GHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------HHHHHHhcCCCCCCC----CCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                       1333444332 2222    3589999999999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=7.6e-35  Score=293.63  Aligned_cols=258  Identities=24%  Similarity=0.419  Sum_probs=164.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      -+.|++ .+.||+|+||.||+|.+..+|+.||||++.....   .....+.+|+.++..+ +||||+++++++.+....+
T Consensus        31 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           31 LANFRI-EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELN  108 (310)
T ss_dssp             GGGEEE-EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             ccceEE-EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEE
Confidence            345665 5789999999999999999999999999975322   2345678999999987 5999999999887654322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++.-+ +              .+...           +..... ..... .
T Consensus       109 ---lv-----------------------~e~~~~-~--------------~L~~~-----------l~~~~~-~~~~~-~  134 (310)
T 2wqm_A          109 ---IV-----------------------LELADA-G--------------DLSRM-----------IKHFKK-QKRLI-P  134 (310)
T ss_dssp             ---EE-----------------------EECCCS-C--------------BHHHH-----------HHHHHH-TTCCC-C
T ss_pred             ---EE-----------------------EecCCC-C--------------CHHHH-----------HHHhcc-cccCC-C
Confidence               11                       111000 0              00000           000000 00000 0


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ..++|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       135 ~~~~~~------------------------i~~q---i~~~l~~LH--~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg~  182 (310)
T 2wqm_A          135 ERTVWK------------------------YFVQ---LCSALEHMH--SRRVMHRDIKPANVFIT---ATGVVKLGDLGL  182 (310)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEECCC--
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHh--hCCeeCCCCcHHHEEEc---CCCCEEEEeccc
Confidence            001111                        2233   667778888  99999999999999994   445799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +........        .....+||+.|+|||++..      ..|+.++|+|||||++|+|++|..||.+....      
T Consensus       183 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------  242 (310)
T 2wqm_A          183 GRFFSSKTT--------AAHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------  242 (310)
T ss_dssp             ------------------------CCSSCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTC---CC------
T ss_pred             eeeecCCCc--------cccccCCCeeEeChHHhCC------CCCCchhhHHHHHHHHHHHHhCCCCCcccchh------
Confidence            875432211        1235679999999999863      46889999999999999999999999865321      


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ...+...+..+.+  +...+..+++++++||.+||..||.+|||+++++++
T Consensus       243 -------~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          243 -------LYSLCKKIEQCDY--PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             -------HHHHHHHHHTTCS--CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------HHHHHHHhhcccC--CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                   2234455555443  222235689999999999999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.5e-34  Score=286.96  Aligned_cols=257  Identities=19%  Similarity=0.264  Sum_probs=167.4

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCC---cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTE---LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~---~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      ....|++ .+.||+|+||.||+|.+..++   ..||||.+.+... .....+.+|+.+++++ +||||+++++++.....
T Consensus        23 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  100 (298)
T 3f66_A           23 SSLIVHF-NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEG  100 (298)
T ss_dssp             GGEEEEE-EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSS
T ss_pred             cceehhh-cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCC
Confidence            3445665 578999999999999875433   4689999875332 2345688999999987 59999999998644322


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..   .+                      +.++--+ +              .+...+..               .....
T Consensus       101 ~~---~~----------------------v~e~~~~-~--------------~L~~~l~~---------------~~~~~  125 (298)
T 3f66_A          101 SP---LV----------------------VLPYMKH-G--------------DLRNFIRN---------------ETHNP  125 (298)
T ss_dssp             CC---EE----------------------EEECCTT-C--------------BHHHHHHC---------------TTCCC
T ss_pred             ce---EE----------------------EEeCCCC-C--------------CHHHHHHh---------------cccCC
Confidence            11   01                      1111000 0              00000000               00000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                       ...++|.                        |..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+||
T Consensus       126 -~~~~~~~------------------------i~~q---l~~~l~~lH--~~~i~H~dikp~Nil~~---~~~~~kl~Df  172 (298)
T 3f66_A          126 -TVKDLIG------------------------FGLQ---VAKGMKYLA--SKKFVHRDLAARNCMLD---EKFTVKVADF  172 (298)
T ss_dssp             -CHHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTCCEEECSC
T ss_pred             -CHHHHHH------------------------HHHH---HHHHHHHHH--hCCccCCCCchheEEEC---CCCCEEECcc
Confidence             0001111                        2233   667788888  99999999999999994   4457999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~  359 (539)
                      |+++.........    ........||+.|+|||++.+      ..|+.++|+|||||++|+|++ |.+||.+.+..+  
T Consensus       173 g~a~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--  240 (298)
T 3f66_A          173 GLARDMYDKEYYS----VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--  240 (298)
T ss_dssp             GGGCCCSCGGGCB----C-----CCBCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--
T ss_pred             cccccccccchhc----cccccCCCCCccccChHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--
Confidence            9997543221110    011234578999999999964      468899999999999999999 667776654322  


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                   ....+..+......   ..+++++.+||.+||..||.+|||++|+++
T Consensus       241 -------------~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          241 -------------ITVYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -------------HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------HHHHHhcCCCCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                         33344444433322   357899999999999999999999999885

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.3e-34  Score=292.26  Aligned_cols=262  Identities=21%  Similarity=0.269  Sum_probs=162.6

Q ss_pred             chhcccCceeceeCceEEEEEEEcc---CCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL---TELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~---t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      +.|.+ ++.||+|+||.||+|....   ++..||||++.....  .....+.+|+.++.++ +||||+++++++.+....
T Consensus        34 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           34 NLLIL-GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             GGEEE-EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC----
T ss_pred             HHeee-ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeecccc
Confidence            34554 6789999999999998765   556899999964322  2235678999999987 599999999998764322


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ...          .-.+           +.++--+ +              .+...+          ............+
T Consensus       112 ~~~----------~~~~-----------v~e~~~~-~--------------~L~~~l----------~~~~~~~~~~~~~  145 (313)
T 3brb_A          112 GIP----------KPMV-----------ILPFMKY-G--------------DLHTYL----------LYSRLETGPKHIP  145 (313)
T ss_dssp             -------------CEEE-----------EEECCTT-C--------------BHHHHH----------HHTTBTTSCCCCC
T ss_pred             CCc----------ccEE-----------EEecccC-C--------------CHHHHH----------HHhhhhcCCccCC
Confidence            100          0001           1111000 0              000000          0000000000000


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                       ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||
T Consensus       146 -~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~dikp~NIli~---~~~~~kl~Dfg  192 (313)
T 3brb_A          146 -LQTLLK------------------------FMVD---IALGMEYLS--NRNFLHRDLAARNCMLR---DDMTVCVADFG  192 (313)
T ss_dssp             -HHHHHH------------------------HHHH---HHHHHHHHH--TTTCCCCCCSGGGEEEC---TTSCEEECSCS
T ss_pred             -HHHHHH------------------------HHHH---HHHHHHHHH--hCCcccCCCCcceEEEc---CCCcEEEeecC
Confidence             001111                        2333   667788888  99999999999999994   44579999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++.........      ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+....    
T Consensus       193 ~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----  256 (313)
T 3brb_A          193 LSKKIYSGDYYR------QGRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----  256 (313)
T ss_dssp             CC----------------------CCGGGSCHHHHHS------SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred             cceecccccccC------cccccCCCccccCchhhcC------CCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----
Confidence            987543221100      1124467899999999963      468999999999999999999 99999875421    


Q ss_pred             ccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                 .+...+..+. ..++    ..+++++.+||.+||..||.+|||+.++++|
T Consensus       257 -----------~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          257 -----------EMYDYLLHGHRLKQP----EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             -----------GHHHHHHTTCCCCCB----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -----------HHHHHHHcCCCCCCC----ccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                       2344444443 2333    4689999999999999999999999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=9.6e-35  Score=295.91  Aligned_cols=266  Identities=18%  Similarity=0.284  Sum_probs=171.5

Q ss_pred             hcccCceeceeCceEEEEEEEccCCc-----EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTEL-----EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~-----~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      |++ .+.||+|+||.||+|.+..++.     .||||++..... .....+.+|+.++..+.+||||+++++++.+....+
T Consensus        48 ~~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  126 (333)
T 2i1m_A           48 LQF-GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL  126 (333)
T ss_dssp             EEE-EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             cee-eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceE
Confidence            443 5789999999999999977664     799999965332 234568899999999867999999999997654332


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .++.-+ +              .+...+...        ....+. ...+..
T Consensus       127 ---lv-----------------------~e~~~~-g--------------~L~~~l~~~--------~~~~~~-~~~~~~  156 (333)
T 2i1m_A          127 ---VI-----------------------TEYCCY-G--------------DLLNFLRRK--------SRVLET-DPAFAI  156 (333)
T ss_dssp             ---EE-----------------------EECCTT-E--------------EHHHHHHHH--------HHHHSC-C-----
T ss_pred             ---EE-----------------------EecCCC-C--------------cHHHHHHHh--------cccccc-cccccc
Confidence               11                       111000 0              000000000        000000 000000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      .....+...++                  .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       157 ~~~~~~~~~~~------------------~~~~q---i~~~l~~lH--~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~  210 (333)
T 2i1m_A          157 ANSTASTRDLL------------------HFSSQ---VAQGMAFLA--SKNCIHRDVAARNVLLTN---GHVAKIGDFGL  210 (333)
T ss_dssp             --CCCCHHHHH------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGCEEEG---GGEEEBCCCGG
T ss_pred             cccccCHHHHH------------------HHHHH---HHHHHHHHh--cCCcccCCcccceEEECC---CCeEEECcccc
Confidence            00000000000                  02233   667788888  899999999999999953   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      ++........      .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+....     
T Consensus       211 ~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-----  273 (333)
T 2i1m_A          211 ARDIMNDSNY------IVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-----  273 (333)
T ss_dssp             GCCGGGCTTS------EECSSCEECGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-----
T ss_pred             ccccccccce------eecCCCCCCccccCHHHhcc------CCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-----
Confidence            9754332210      01234568899999999874      468899999999999999998 99999875422     


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                               ..+...+..+ +..+.  ....++++.+||.+||..||.+|||++|++++
T Consensus       274 ---------~~~~~~~~~~-~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          274 ---------SKFYKLVKDG-YQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             ---------HHHHHHHHHT-CCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------HHHHHHHhcC-CCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence                     1222333332 22221  13578999999999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=4.3e-35  Score=313.50  Aligned_cols=265  Identities=19%  Similarity=0.217  Sum_probs=172.9

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.....  ..++.+|++++..+.+|++|..+..++.+....+  
T Consensus         5 i~~~y~i-~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~--   79 (483)
T 3sv0_A            5 VGNKFRL-GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV--   79 (483)
T ss_dssp             ETTTEEC-CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE--
T ss_pred             cCCcEEE-EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE--
Confidence            4567776 5789999999999999999999999999865432  2357889999999876666766655554332211  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                   +           +.++. + +              .+...           +..    ....+    
T Consensus        80 -------------l-----------vme~~-g-~--------------sL~~l-----------l~~----~~~~l----  100 (483)
T 3sv0_A           80 -------------L-----------VMDLL-G-P--------------SLEDL-----------FNF----CSRKL----  100 (483)
T ss_dssp             -------------E-----------EEECC-C-C--------------BHHHH-----------HHH----TTTCC----
T ss_pred             -------------E-----------EEECC-C-C--------------CHHHH-----------HHh----hcCCC----
Confidence                         1           11111 0 0              00000           000    00000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                         +...++                  .|..|   ++.++.|+|  ++|||||||||+|||+...+..+.+||+|||+++
T Consensus       101 ---~~~~~~------------------~i~~q---i~~aL~yLH--~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A          101 ---SLKTVL------------------MLADQ---MINRVEFVH--SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             ---CHHHHH------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             ---CHHHHH------------------HHHHH---HHHHHHHHH--HCCEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence               000000                  02333   667788888  9999999999999999644455679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......... ..........+||+.|+|||++.+      ..|+.++|||||||++|+|++|..||.+.....       
T Consensus       155 ~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-------  220 (483)
T 3sv0_A          155 KYRDTSTHQ-HIPYRENKNLTGTARYASVNTHLG------IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-------  220 (483)
T ss_dssp             ECBCTTTCC-BCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-------
T ss_pred             eccCCcccc-ccccccccccCCCccccCHHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCccccchh-------
Confidence            654322110 000011236789999999999863      468999999999999999999999998754321       


Q ss_pred             cchhhHHHHHHHHhcCCCCCC-CCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        365 TCHACQEILFHSIQQGHYDFP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p-~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                           ....+..+.......+ ......+++++.+||.+||..||++||++++++
T Consensus       221 -----~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~  270 (483)
T 3sv0_A          221 -----KKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLK  270 (483)
T ss_dssp             -----HHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred             -----HHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHH
Confidence                 1122223322211111 111135789999999999999999999998765

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=6.6e-35  Score=291.52  Aligned_cols=251  Identities=19%  Similarity=0.306  Sum_probs=167.9

Q ss_pred             chhcccCceeceeCceEEEEEEE--ccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVN--ILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~--~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.|++..+.||+|+||.||+|..  ..++..||||++......  ....+.+|++++..+ +||||+++++++..+.. +
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~-~   93 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEAESW-M   93 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESSSE-E
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEECCCCc-E
Confidence            45666444899999999999954  567789999999654322  245788999999987 59999999998843221 1


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +                      +.++--+ +              .+...+.....+..+               
T Consensus        94 ----l----------------------v~e~~~~-~--------------~L~~~l~~~~~~~~~---------------  117 (291)
T 1xbb_A           94 ----L----------------------VMEMAEL-G--------------PLNKYLQQNRHVKDK---------------  117 (291)
T ss_dssp             ----E----------------------EEECCTT-E--------------EHHHHHHHCTTCCHH---------------
T ss_pred             ----E----------------------EEEeCCC-C--------------CHHHHHHhCcCCCHH---------------
Confidence                1                      1111000 0              000000000000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        .+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       118 --~~~~------------------------i~~q---i~~~l~~LH--~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~  163 (291)
T 1xbb_A          118 --NIIE------------------------LVHQ---VSMGMKYLE--ESNFVHRDLAARNVLLVT---QHYAKISDFGL  163 (291)
T ss_dssp             --HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEEE---TTEEEECCCTT
T ss_pred             --HHHH------------------------HHHH---HHHHHHHHH--hCCeEcCCCCcceEEEeC---CCcEEEccCCc
Confidence              0100                        2333   667788888  899999999999999964   34699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      +..........     .......||+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+       
T Consensus       164 ~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-------  225 (291)
T 1xbb_A          164 SKALRADENYY-----KAQTHGKWPVKWYAPECINY------YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-------  225 (291)
T ss_dssp             CEECCTTCSEE-----EC----CCCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-------
T ss_pred             ceeeccCCCcc-----cccccCCCCceeeChHHhcc------CCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-------
Confidence            87543322110     01123457899999999964      458889999999999999999 999998653       


Q ss_pred             cCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              ...+...+..+. ..+|    ..+++++.+||.+||..||.+||++.++++
T Consensus       226 --------~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          226 --------GSEVTAMLEKGERMGCP----AGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             --------HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------HHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    233455555543 2333    368999999999999999999999999885

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.6e-35  Score=322.03  Aligned_cols=283  Identities=20%  Similarity=0.293  Sum_probs=175.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|++ .+.||+|+||.||+|.+..+|+.||||++.... ......+.+|++++.++ +||||+++++++.+....... 
T Consensus        14 grY~i-~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~-   90 (676)
T 3qa8_A           14 GPWEM-KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPN-   90 (676)
T ss_dssp             ---CC-CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTT-
T ss_pred             CCeEE-EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCC-
Confidence            56776 578999999999999999999999999986532 22345688999999997 599999999988653221100 


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                               ...          .-+.++--+ +              .+...           +....  .....+ ...
T Consensus        91 ---------~~~----------~LVmEy~~g-g--------------sL~~~-----------L~~~~--~~~~ls-e~~  122 (676)
T 3qa8_A           91 ---------DLP----------LLAMEYCEG-G--------------DLRKY-----------LNQFE--NCCGLK-EGP  122 (676)
T ss_dssp             ---------SSC----------CCEEECCSS-C--------------BHHHH-----------HHSSS--CTTCCC-SSH
T ss_pred             ---------CeE----------EEEEEeCCC-C--------------CHHHH-----------HHhcc--cCCCCC-HHH
Confidence                     000          001111000 0              00000           00000  000000 001


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      +|.                        +..+   ++.++.|+|  ++||+||||||+|||+..++....+||+|||++..
T Consensus       123 i~~------------------------I~~Q---Ll~aL~yLH--s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A          123 IRT------------------------LLSD---ISSALRYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             HHH------------------------HHHH---HHHHHHHHH--HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             HHH------------------------HHHH---HHHHHHHHH--HCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence            111                        2333   667788888  99999999999999997655544589999999876


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      .....         .....+||+.|+|||++.+      ..|+.++||||+||++|+|++|..||.+.............
T Consensus       174 ~~~~~---------~~~~~~gt~~Y~APE~l~~------~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~  238 (676)
T 3qa8_A          174 LDQGE---------LCTEFVGTLQYLAPELLEQ------KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE  238 (676)
T ss_dssp             TTSCC---------CCCCCCSCCTTCSSCSSCC------SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-
T ss_pred             ccccc---------ccccccCCcccCChHHhcc------CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc
Confidence            53322         1235689999999999863      46899999999999999999999999764211000000000


Q ss_pred             chhhHHHHHHHHhcCCCCC------CCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        366 CHACQEILFHSIQQGHYDF------PEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~------p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                       .............+.+.+      |...+..+++++.+||.+||..||.+|||++|+|+||||..
T Consensus       239 -~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          239 -KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             -ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence             000000000011222222      22223446789999999999999999999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.7e-35  Score=305.97  Aligned_cols=251  Identities=18%  Similarity=0.275  Sum_probs=169.7

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +.|.+ .+.||+|+||.||+|.+..+++.||||++..... .....+.+|+++|..+ +|||||++++++.+....+   
T Consensus       114 ~~~~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~---  188 (377)
T 3cbl_A          114 EDLVL-GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIY---  188 (377)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCE---
T ss_pred             HHeEE-eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcE---
Confidence            34444 5789999999999999999999999999864321 1234577899999987 5999999999987654322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .                       +.+|--+ +              .+...+..         .      ....     
T Consensus       189 l-----------------------v~e~~~~-g--------------~L~~~l~~---------~------~~~~-----  210 (377)
T 3cbl_A          189 I-----------------------VMELVQG-G--------------DFLTFLRT---------E------GARL-----  210 (377)
T ss_dssp             E-----------------------EEECCTT-C--------------BHHHHHHH---------H------GGGC-----
T ss_pred             E-----------------------EEEcCCC-C--------------CHHHHHHh---------c------CCCC-----
Confidence            1                       1111000 0              00000000         0      0000     


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                        +...++ .                 +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++.
T Consensus       211 --~~~~~~-~-----------------~~~q---i~~~l~~LH--~~~ivHrDlkp~Nil~~---~~~~~kl~DfG~s~~  262 (377)
T 3cbl_A          211 --RVKTLL-Q-----------------MVGD---AAAGMEYLE--SKCCIHRDLAARNCLVT---EKNVLKISDFGMSRE  262 (377)
T ss_dssp             --CHHHHH-H-----------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEECCGGGCEE
T ss_pred             --CHHHHH-H-----------------HHHH---HHHHHHHHH--HCCcCCcccCHHHEEEc---CCCcEEECcCCCcee
Confidence              000000 0                 2233   667788888  99999999999999994   445799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      ........      ......+|+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+          
T Consensus       263 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~t~g~~p~~~~~----------  320 (377)
T 3cbl_A          263 EADGVYAA------SGGLRQVPVKWTAPEALNY------GRYSSESDVWSFGILLWETFSLGASPYPNLS----------  320 (377)
T ss_dssp             CTTSEEEC------CSSCCEEEGGGSCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC----------
T ss_pred             cCCCceee------cCCCCCCCcCcCCHhHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----------
Confidence            32211000      0012346778999999973      458899999999999999998 999997653          


Q ss_pred             cchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ...+...+..+. ..+|    ..+++++.+||.+||..||.+|||++++++
T Consensus       321 -----~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          321 -----NQQTREFVEKGGRLPCP----ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             -----HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----HHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                 123344444432 2333    357899999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.5e-35  Score=292.69  Aligned_cols=268  Identities=20%  Similarity=0.299  Sum_probs=176.5

Q ss_pred             ccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..|...|++ .+.||+|+||.||+|.+..+++.||||++....    ..+.+|++++..+ +||||+++++++.......
T Consensus         7 ~~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (284)
T 2a19_B            7 KRFGMDFKE-IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDP   80 (284)
T ss_dssp             HHHHHHEEE-EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC-
T ss_pred             chhccccce-eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCc
Confidence            346667775 578999999999999999999999999996532    3567899999997 5999999999886532110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .........-....+          .-+.++.-+ +              .+...           +...   .....+ 
T Consensus        81 ~~~~~~~~~~~~~~~----------~lv~e~~~~-~--------------~L~~~-----------l~~~---~~~~~~-  120 (284)
T 2a19_B           81 ETSSKNSSRSKTKCL----------FIQMEFCDK-G--------------TLEQW-----------IEKR---RGEKLD-  120 (284)
T ss_dssp             --------CCEEEEE----------EEEECCCCS-C--------------BHHHH-----------HHHG---GGSCCC-
T ss_pred             ccccccccccCcceE----------EEEEeccCC-C--------------CHHHH-----------Hhhc---cCCCCC-
Confidence            000000000000000          001111000 0              00000           0000   000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...+|                        .+..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       121 ~~~~~------------------------~i~~q---i~~~l~~lH--~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~  168 (284)
T 2a19_B          121 KVLAL------------------------ELFEQ---ITKGVDYIH--SKKLINRDLKPSNIFLVD---TKQVKIGDFGL  168 (284)
T ss_dssp             HHHHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEEE---TTEEEECCCTT
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--hCCeeeccCCHHHEEEcC---CCCEEECcchh
Confidence            00000                        02333   667777888  999999999999999954   35699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +.......         .....+||+.|+|||++..      ..|+.++|+|||||++|+|++|..||...         
T Consensus       169 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~~~~~~~~---------  224 (284)
T 2a19_B          169 VTSLKNDG---------KRTRSKGTLRYMSPEQISS------QDYGKEVDLYALGLILAELLHVCDTAFET---------  224 (284)
T ss_dssp             CEESSCCS---------CCCCCCSCCTTSCHHHHHC------SCCCTHHHHHHHHHHHHHHHSCCSSHHHH---------
T ss_pred             heeccccc---------cccccCCcccccChhhhcc------CCCcchhhhHHHHHHHHHHHhcCCcchhH---------
Confidence            87543221         1235679999999999863      46889999999999999999999988531         


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                              ......+..+.+  +    ..++.++++||.+||..||.+|||+.|+++|.|....
T Consensus       225 --------~~~~~~~~~~~~--~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          225 --------SKFFTDLRDGII--S----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             --------HHHHHHHHTTCC--C----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             --------HHHHHHhhcccc--c----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence                    223344444332  2    3578999999999999999999999999999887543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.1e-34  Score=312.00  Aligned_cols=249  Identities=20%  Similarity=0.270  Sum_probs=173.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |.+ .+.||+|+||.||+|.+..++..||||+++... .....+.+|+++|.++ +|||||++++++.+....+   .| 
T Consensus       222 ~~~-~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~---lv-  294 (495)
T 1opk_A          222 ITM-KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFY---II-  294 (495)
T ss_dssp             EEE-EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE---EE-
T ss_pred             cee-eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEE---EE-
Confidence            443 468999999999999999999999999996533 3467889999999997 5999999999987654322   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                            .+|--+ +              .+...           +....   ....+       
T Consensus       295 ----------------------~E~~~~-g--------------~L~~~-----------l~~~~---~~~~~-------  316 (495)
T 1opk_A          295 ----------------------TEFMTY-G--------------NLLDY-----------LRECN---RQEVS-------  316 (495)
T ss_dssp             ----------------------EECCTT-C--------------BHHHH-----------HHHSC---TTTSC-------
T ss_pred             ----------------------EEccCC-C--------------CHHHH-----------HHhcC---cCCCC-------
Confidence                                  111000 0              00000           00000   00000       


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      ...+ ..                 +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++....
T Consensus       317 ~~~~-~~-----------------i~~q---i~~~L~~LH--~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          317 AVVL-LY-----------------MATQ---ISSAMEYLE--KKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             HHHH-HH-----------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---GGGCEEECCTTCEECCTT
T ss_pred             HHHH-HH-----------------HHHH---HHHHHHHHH--hCCcccCCCChhhEEEC---CCCcEEEeecccceeccC
Confidence            0000 00                 2233   667788888  99999999999999994   446799999999875432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....       ......+|+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+..           
T Consensus       371 ~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----------  426 (495)
T 1opk_A          371 DTYT-------AHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------  426 (495)
T ss_dssp             CCEE-------CCTTCCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----------
T ss_pred             Ccee-------ecCCCcCCcceeCHhHHhc------CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----------
Confidence            2110       1123457889999999973      468899999999999999998 99999875421           


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          .+...+..+ +.++.  ...+++++.+||.+||..||.+|||++++++
T Consensus       427 ----~~~~~~~~~-~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          427 ----QVYELLEKD-YRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             ----GHHHHHHTT-CCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----HHHHHHHcC-CCCCC--CCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                234444433 22222  2468999999999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.9e-34  Score=281.82  Aligned_cols=250  Identities=13%  Similarity=0.123  Sum_probs=165.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||.||+|.+  ++..||||++.....  .....+.+|+.++.++ +||||+++++++.+.....  
T Consensus        10 ~~y~~-~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~--   83 (271)
T 3kmu_A           10 KQLNF-LTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPH--   83 (271)
T ss_dssp             GGCEE-EEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSS--
T ss_pred             HHhHH-HHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCC--
Confidence            34554 47899999999999987  488899999975432  2245688999999887 5999999999987652110  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                  +.          -+.++.-+ +              .+...+...              .....+ ..
T Consensus        84 ------------~~----------lv~e~~~~-~--------------~L~~~l~~~--------------~~~~~~-~~  111 (271)
T 3kmu_A           84 ------------PT----------LITHWMPY-G--------------SLYNVLHEG--------------TNFVVD-QS  111 (271)
T ss_dssp             ------------CE----------EEEECCTT-C--------------BHHHHHHSC--------------SSCCCC-HH
T ss_pred             ------------eE----------eeecccCC-C--------------cHHHHHhhc--------------ccCCCC-HH
Confidence                        00          01111100 0              000000000              000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      .+|.                        +..+   ++.++.|+|  ++|  |+||||||+|||+.   ..+.++|+|||+
T Consensus       112 ~~~~------------------------i~~q---i~~~l~~lH--~~~~~i~H~dikp~Nil~~---~~~~~~l~~~~~  159 (271)
T 3kmu_A          112 QAVK------------------------FALD---MARGMAFLH--TLEPLIPRHALNSRSVMID---EDMTARISMADV  159 (271)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHT--TSSSCCTTCCCSGGGEEEC---TTSCEEEEGGGS
T ss_pred             HHHH------------------------HHHH---HHHHHHHHh--cCCCceecCCCccceEEEc---CCcceeEEeccc
Confidence            0110                        2333   667788888  888  99999999999994   445689999888


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +.....             ...+||+.|+|||++.+.   ....++.++|||||||++|+|++|..||.+.+.       
T Consensus       160 ~~~~~~-------------~~~~~t~~y~aPE~~~~~---~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------  216 (271)
T 3kmu_A          160 KFSFQS-------------PGRMYAPAWVAPEALQKK---PEDTNRRSADMWSFAVLLWELVTREVPFADLSN-------  216 (271)
T ss_dssp             CCTTSC-------------TTCBSCGGGSCHHHHHSC---GGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-------
T ss_pred             eeeecc-------------cCccCCccccChhhhccC---CCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-------
Confidence            754221             245799999999998741   112234479999999999999999999976531       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              ......+.......+  .+..+++++.+||.+||..||.+|||++|+++
T Consensus       217 --------~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          217 --------MEIGMKVALEGLRPT--IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             --------HHHHHHHHHSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------HHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    223333333322211  12468999999999999999999999999985

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.8e-35  Score=301.90  Aligned_cols=265  Identities=14%  Similarity=0.102  Sum_probs=164.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEcc---CCcEEEEEEeccCCCC-----------CHHHHHHHHHHHHhhcCCCCeee
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNIL---TELEYAVKIIDKLPGH-----------SRSRVFKEVETFHHCQGHPNIIQ  110 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~---t~~~vAvK~i~k~~~~-----------~~~~~~~Ei~~l~~~~~HpnIv~  110 (539)
                      ..+.|++ .+.||+|+||.||+|.+..   ++..||||++.+....           ....+.+|+..+..+ +||||++
T Consensus        35 ~~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~  112 (345)
T 2v62_A           35 EGNQWVL-GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPL  112 (345)
T ss_dssp             TSCEEEE-EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCC
T ss_pred             cCceEEE-EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcce
Confidence            3456775 5789999999999999987   7889999998653221           112345677777775 6999999


Q ss_pred             eeeeeccc----ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccc
Q psy16343        111 LLEYYEDD----ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP  186 (539)
Q Consensus       111 l~~~~~~~----~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aP  186 (539)
                      +++++.+.    ...+    +                      +.++. + +              .+...+.....+..
T Consensus       113 ~~~~~~~~~~~~~~~~----l----------------------v~e~~-~-~--------------~L~~~l~~~~~~~~  150 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRF----M----------------------VMERL-G-I--------------DLQKISGQNGTFKK  150 (345)
T ss_dssp             EEEEEEEESSSCEEEE----E----------------------EEECE-E-E--------------EHHHHCBGGGBCCH
T ss_pred             eecccccccCCCcEEE----E----------------------EEecc-C-C--------------CHHHHHHhcCCCCH
Confidence            99988663    1111    1                      11111 1 0              00000000000000


Q ss_pred             cccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceee
Q psy16343        187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILC  266 (539)
Q Consensus       187 E~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~  266 (539)
                      +                 .++   .                     +..|   ++.++.|+|  ++||+||||||+|||+
T Consensus       151 ~-----------------~~~---~---------------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll  184 (345)
T 2v62_A          151 S-----------------TVL---Q---------------------LGIR---MLDVLEYIH--ENEYVHGDIKAANLLL  184 (345)
T ss_dssp             H-----------------HHH---H---------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEE
T ss_pred             H-----------------HHH---H---------------------HHHH---HHHHHHHHH--hCCeeCCCcCHHHEEE
Confidence            0                 000   0                     3334   677888888  8999999999999999


Q ss_pred             cCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC
Q psy16343        267 VHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG  346 (539)
Q Consensus       267 ~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G  346 (539)
                      ..++ .+.+||+|||+++.+...... ...........+||+.|+|||++.+      ..|+.++|||||||++|+|++|
T Consensus       185 ~~~~-~~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g  256 (345)
T 2v62_A          185 GYKN-PDQVYLADYGLSYRYCPNGNH-KQYQENPRKGHNGTIEFTSLDAHKG------VALSRRSDVEILGYCMLRWLCG  256 (345)
T ss_dssp             ESSS-TTSEEECCCTTCEESSGGGCC-CCCCCCGGGCSCSCTTTCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ccCC-CCcEEEEeCCCceeccccccc-ccchhccccccCCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhC
Confidence            6543 237999999999765432211 0111112346789999999999873      4689999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCC-----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        347 YPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       347 ~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~-----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ..||.+.....             .............+|..     ....+++++++||.+||..||++||+++++++.
T Consensus       257 ~~pf~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          257 KLPWEQNLKDP-------------VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             SCTTGGGTTCH-------------HHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             CCCcccccccc-------------HHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            99997532111             11111111111111110     012689999999999999999999999998763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=8.6e-35  Score=301.77  Aligned_cols=252  Identities=19%  Similarity=0.288  Sum_probs=159.6

Q ss_pred             hhcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .|.+ .+.||+|+||.||+|++.   .++..||||+++... ......+.+|+.++.++ +||||+++++++.+....+ 
T Consensus        46 ~~~~-~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-  122 (373)
T 2qol_A           46 NISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVM-  122 (373)
T ss_dssp             GCCC-CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCE-
T ss_pred             hcee-eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceE-
Confidence            4554 678999999999999876   467789999996532 22345688999999987 5999999999987654322 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         +                      +.+|.-+ +              .+...           +..    .....   
T Consensus       123 ---l----------------------v~e~~~~-~--------------sL~~~-----------l~~----~~~~~---  144 (373)
T 2qol_A          123 ---I----------------------VTEYMEN-G--------------SLDSF-----------LRK----HDAQF---  144 (373)
T ss_dssp             ---E----------------------EEECCTT-C--------------BHHHH-----------HHT----TTTCS---
T ss_pred             ---E----------------------EEeCCCC-C--------------cHHHH-----------HHh----CCCCC---
Confidence               1                      1111000 0              00000           000    00000   


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                          +...++ .                 +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++
T Consensus       145 ----~~~~~~-~-----------------i~~q---i~~aL~~LH--~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a  194 (373)
T 2qol_A          145 ----TVIQLV-G-----------------MLRG---IASGMKYLS--DMGYVHRDLAARNILIN---SNLVCKVSDFGLG  194 (373)
T ss_dssp             ----CHHHHH-H-----------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEECCC---
T ss_pred             ----CHHHHH-H-----------------HHHH---HHHHHHHHH--HCCeeCCCCCcceEEEc---CCCCEEECcCccc
Confidence                000000 0                 2333   667788888  99999999999999994   4467999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      +.........     .......+|+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+        
T Consensus       195 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--------  255 (373)
T 2qol_A          195 RVLEDDPEAA-----YTTRGGKIPIRWTSPEAIAY------RKFTSASDVWSYGIVLWEVMSYGERPYWEMS--------  255 (373)
T ss_dssp             ------------------------CTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--------
T ss_pred             cccccCCccc-----eeccCCCcCCCccChhhhcc------CCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--------
Confidence            7553321100     01112346789999999974      468999999999999999997 999997653        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ...+...+..+. ..+.  ...++.++.+||.+||..||.+||+++|+++
T Consensus       256 -------~~~~~~~i~~~~-~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          256 -------NQDVIKAVDEGY-RLPP--PMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             -------HHHHHHHHHTTE-ECCC--CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------HHHHHHHHHcCC-CCCC--CccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                   233445555442 2222  1357899999999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.1e-34  Score=286.55  Aligned_cols=257  Identities=22%  Similarity=0.310  Sum_probs=162.2

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ..+.|++ .+.||+|+||.||+|...   ..||||+++....  .....+.+|++++..+ +||||++++++....... 
T Consensus        22 ~~~~y~~-~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~-   95 (289)
T 3og7_A           22 PDGQITV-GQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTAPQLA-   95 (289)
T ss_dssp             CTTSCEE-EEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSCE-
T ss_pred             Cccceee-eeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeeccCCccE-
Confidence            3445665 578999999999999743   3599999964332  2235678999999987 599999999865433211 


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +                      +.++--+ +              .+...+..               .....+ 
T Consensus        96 ----l----------------------v~e~~~~-~--------------~L~~~l~~---------------~~~~~~-  118 (289)
T 3og7_A           96 ----I----------------------VTQWCEG-S--------------SLYHHLHA---------------SETKFE-  118 (289)
T ss_dssp             ----E----------------------EEECCCE-E--------------EHHHHHTT---------------C---CC-
T ss_pred             ----E----------------------EEEecCC-C--------------cHHHHHhh---------------ccCCCC-
Confidence                1                      1111000 0              00000000               000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       119 ~~~~~~------------------------i~~q---i~~~L~~lH--~~~i~H~Dlkp~Nil~~~---~~~~kl~Dfg~  166 (289)
T 3og7_A          119 MKKLID------------------------IARQ---TARGMDYLH--AKSIIHRDLKSNNIFLHE---DNTVKIGDFGL  166 (289)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEET---TTEEEECCCC-
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--hCCcccccCccceEEECC---CCCEEEcccee
Confidence            000100                        2333   667788888  999999999999999954   35699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +........      .......+||+.|+|||++...   ....|+.++|||||||++|+|++|..||.+...       
T Consensus       167 ~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------  230 (289)
T 3og7_A          167 ATEKSRWSG------SHQFEQLSGSILWMAPEVIRMQ---DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-------  230 (289)
T ss_dssp             -----------------------CCCTTCCHHHHC-------CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-------
T ss_pred             ccccccccc------cccccccCCCccccCchhhccc---CCCCCCcccchHHHHHHHHHHHHCCCCccccch-------
Confidence            875432111      1123456899999999998631   124688899999999999999999999976432       


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                             ...+...+..+.+..+. ..+..+++++++||.+||..||.+|||++|+++
T Consensus       231 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          231 -------RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             -------HHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------HHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                   23345555555443322 233568999999999999999999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=3.8e-34  Score=304.32  Aligned_cols=243  Identities=19%  Similarity=0.275  Sum_probs=166.5

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||+|+||.||+|..  +++.||||+++...  ....+.+|+++|.++ +|||||++++++.......     
T Consensus       194 ~~~~-~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-----  262 (450)
T 1k9a_A          194 ELKL-LQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGL-----  262 (450)
T ss_dssp             GEEE-EEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCE-----
T ss_pred             HeEE-EeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCce-----
Confidence            3444 47899999999999986  47899999996533  456789999999997 5999999999875432111     


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                .          -+.+|--+ +              .+...           +...    ....      .
T Consensus       263 ----------~----------iv~e~~~~-g--------------~L~~~-----------l~~~----~~~~------~  286 (450)
T 1k9a_A          263 ----------Y----------IVTEYMAK-G--------------SLVDY-----------LRSR----GRSV------L  286 (450)
T ss_dssp             ----------E----------EEEECCTT-C--------------BHHHH-----------HHHH----CTTT------C
T ss_pred             ----------E----------EEEEecCC-C--------------cHHHH-----------HHhc----CCCC------C
Confidence                      0          01111000 0              00000           0000    0000      0


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      +...++                  .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++...
T Consensus       287 ~~~~~~------------------~~~~q---i~~~l~~LH--~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          287 GGDCLL------------------KFSLD---VCEAMEYLE--GNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             CHHHHH------------------HHHHH---HHHHHHHHH--HTTEECSCCCGGGEEEC---TTSCEEECCCTTCEECC
T ss_pred             CHHHHH------------------HHHHH---HHHHHHHHH--hCCeeCCCCCHhhEEEC---CCCCEEEeeCCCccccc
Confidence            000000                  02333   667788888  99999999999999994   44679999999987432


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      ..           ..+..+|+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+..+         
T Consensus       341 ~~-----------~~~~~~~~~y~aPE~~~~------~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---------  394 (450)
T 1k9a_A          341 ST-----------QDTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---------  394 (450)
T ss_dssp             -----------------CCCTTTSCHHHHHS------SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---------
T ss_pred             cc-----------ccCCCCCcceeCHHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---------
Confidence            21           123467899999999963      468999999999999999998 999998754322         


Q ss_pred             hhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        367 HACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            +...+..+. +..|    ..+++++.+||.+||..||.+|||+.++++
T Consensus       395 ------~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          395 ------VVPRVEKGYKMDAP----DGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             ------HHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------HHHHHHcCCCCCCC----CcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                  445555542 2333    468999999999999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=7.6e-34  Score=281.77  Aligned_cols=249  Identities=19%  Similarity=0.271  Sum_probs=170.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||.||+|.+. ++..||||++.... .....+.+|++++..+ +||||+++++++.++..+    
T Consensus        12 ~~~y~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~----   83 (279)
T 1qpc_A           12 RETLKL-VERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQL-QHQRLVRLYAVVTQEPIY----   83 (279)
T ss_dssp             GGGEEE-EEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSCE----
T ss_pred             HHhhhh-eeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhC-CCcCcceEEEEEcCCCcE----
Confidence            345665 478999999999999864 56789999996532 3467789999999997 599999999987643211    


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                       +                      +.++--+ +              .+...+...        ..      ...+ ...
T Consensus        84 -~----------------------v~e~~~~-~--------------~L~~~l~~~--------~~------~~~~-~~~  110 (279)
T 1qpc_A           84 -I----------------------ITEYMEN-G--------------SLVDFLKTP--------SG------IKLT-INK  110 (279)
T ss_dssp             -E----------------------EEECCTT-C--------------BHHHHTTSH--------HH------HTCC-HHH
T ss_pred             -E----------------------EEecCCC-C--------------CHHHHHhcC--------CC------CCCC-HHH
Confidence             1                      1111000 0              000000000        00      0000 000


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ++.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++..
T Consensus       111 ~~~------------------------i~~q---i~~~l~~lH--~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A          111 LLD------------------------MAAQ---IAEGMAFIE--ERNYIHRDLRAANILVS---DTLSCKIADFGLARL  158 (279)
T ss_dssp             HHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             HHH------------------------HHHH---HHHHHHHHH--HCCeeccCCCHhhEEEc---CCCCEEECCCccccc
Confidence            000                        2333   667778888  99999999999999994   446799999999875


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......       ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+          
T Consensus       159 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~----------  215 (279)
T 1qpc_A          159 IEDNEYT-------AREGAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT----------  215 (279)
T ss_dssp             CSSSCEE-------CCTTCCCCTTTSCHHHHHH------CEECHHHHHHHHHHHHHHHHTTTCCSSTTCC----------
T ss_pred             ccCcccc-------cccCCCCccCccChhhhcc------CCCCchhhhHHHHHHHHHHHhCCCCCCcccC----------
Confidence            4322110       1123467889999999863      358889999999999999999 999997653          


Q ss_pred             cchhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ...+...+..+.. ..+    ..+++++.+||.+||..||.+|||++++++
T Consensus       216 -----~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          216 -----NPEVIQNLERGYRMVRP----DNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             -----HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----HHHHHHHHhcccCCCCc----ccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                 2234455554422 222    468999999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=7.2e-35  Score=292.35  Aligned_cols=268  Identities=20%  Similarity=0.221  Sum_probs=169.4

Q ss_pred             hhcccCceeceeCceEEEEEE----EccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCV----NILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~----~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|++ .+.||+|+||.||+|+    +..+++.||||++.... ......+.+|++++..+ +||||+++++++.+.....
T Consensus        22 ~~~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           22 FLKR-IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GEEE-EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CC
T ss_pred             hhhh-hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCce
Confidence            3454 5789999999999998    56789999999996432 23456788999999997 5999999999987642110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                    +.          -+.++.-+ +              .+...           +..    .....+ 
T Consensus       100 --------------~~----------lv~e~~~~-~--------------~L~~~-----------l~~----~~~~~~-  124 (302)
T 4e5w_A          100 --------------IK----------LIMEFLPS-G--------------SLKEY-----------LPK----NKNKIN-  124 (302)
T ss_dssp             --------------EE----------EEEECCTT-C--------------BHHHH-----------HHH----HTTTCC-
T ss_pred             --------------EE----------EEEEeCCC-C--------------cHHHH-----------HHh----ccccCC-
Confidence                          00          01111000 0              00000           000    000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       125 ~~~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~  172 (302)
T 4e5w_A          125 LKQQLK------------------------YAVQ---ICKGMDYLG--SRQYVHRDLAARNVLVES---EHQVKIGDFGL  172 (302)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEEE---TTEEEECCCTT
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHhh--cCCcccCCCchheEEEcC---CCCEEECcccc
Confidence            000110                        2333   667788888  999999999999999954   35699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +.........     ........||+.|+|||++.+      ..|+.++|||||||++|+|++|..||............
T Consensus       173 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~  241 (302)
T 4e5w_A          173 TKAIETDKEY-----YTVKDDRDSPVFWYAPECLMQ------SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIG  241 (302)
T ss_dssp             CEECCTTCCE-----EECCCCTTCCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHC
T ss_pred             cccccCCCcc-----eeccCCCCCCccccCCeeecC------CCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccC
Confidence            8755432210     011235678999999999864      45788999999999999999999987532100000000


Q ss_pred             CccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        363 GETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ..........+...+..+. ..+|    ..+++++.+||.+||..||.+|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          242 PTHGQMTVTRLVNTLKEGKRLPCP----PNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             SCCGGGHHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CcccccCHHHHHHHHhccCCCCCC----CCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            0000011222333343332 2222    468999999999999999999999999875

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-34  Score=293.94  Aligned_cols=253  Identities=18%  Similarity=0.260  Sum_probs=163.9

Q ss_pred             hhcccCceeceeCceEEEEEEEccCC----cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTE----LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~----~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|.+ .+.||+|+||.||+|....++    ..||||++..... .....+.+|++++..+ +||||+++++++.+....+
T Consensus        45 ~~~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           45 CVTR-QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TEEE-EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEE
T ss_pred             Hhhc-ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcE
Confidence            3443 578999999999999987654    3599999964322 2344678999999987 5999999999987654322


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +                      +.++.-+ +              .+...           +..    .....+ 
T Consensus       123 ----l----------------------v~e~~~~-~--------------~L~~~-----------l~~----~~~~~~-  145 (333)
T 1mqb_A          123 ----I----------------------ITEYMEN-G--------------ALDKF-----------LRE----KDGEFS-  145 (333)
T ss_dssp             ----E----------------------EEECCTT-E--------------EHHHH-----------HHH----TTTCSC-
T ss_pred             ----E----------------------EEeCCCC-C--------------cHHHH-----------HHh----CCCCCC-
Confidence                1                      1111000 0              00000           000    000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...++   .                     +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       146 ~~~~~---~---------------------i~~q---i~~aL~~LH--~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~  193 (333)
T 1mqb_A          146 VLQLV---G---------------------MLRG---IAAGMKYLA--NMNYVHRDLAARNILVN---SNLVCKVSDFGL  193 (333)
T ss_dssp             HHHHH---H---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEECCCCC
T ss_pred             HHHHH---H---------------------HHHH---HHHHHHHHH--hCCeeCCCCChheEEEC---CCCcEEECCCCc
Confidence            00000   0                     2333   667778888  99999999999999994   445799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      ++.........     .......||+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+       
T Consensus       194 ~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~pf~~~~-------  255 (333)
T 1mqb_A          194 SRVLEDDPEAT-----YTTSGGKIPIRWTAPEAISY------RKFTSASDVWSFGIVMWEVMTYGERPYWELS-------  255 (333)
T ss_dssp             ----------------------CCCGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-------
T ss_pred             chhhccccccc-----cccCCCCccccccCchhccc------CCCCchhhhHHHHHHHHHHHcCCCCCcccCC-------
Confidence            87543221100     01123357889999999863      468899999999999999998 999997643       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                              ...+...+..+. .++.  ...+++++.+||.+||..||.+||++.+++++
T Consensus       256 --------~~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          256 --------NHEVMKAINDGF-RLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             --------HHHHHHHHHTTC-CCCC--CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             --------HHHHHHHHHCCC-cCCC--cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                    233555565542 2222  23689999999999999999999999999865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.7e-34  Score=307.37  Aligned_cols=249  Identities=21%  Similarity=0.291  Sum_probs=170.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|... ++..||||+++... .....+.+|+.+|..+ +|||||++++++..... +   .
T Consensus       188 ~~~~~-~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~~~~-~---l  259 (454)
T 1qcf_A          188 ESLKL-EKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTL-QHDKLVKLHAVVTKEPI-Y---I  259 (454)
T ss_dssp             GGEEE-EEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSC-E---E
T ss_pred             HHeEE-EEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhC-CCCCEeeEEEEEeCCcc-E---E
Confidence            34444 478999999999999875 46789999997533 3567899999999987 59999999998753211 1   0


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-                 + +              .+...+...        ..      .... ...+
T Consensus       260 v------~e~~~-----------------~-g--------------~L~~~l~~~--------~~------~~~~-~~~~  286 (454)
T 1qcf_A          260 I------TEFMA-----------------K-G--------------SLLDFLKSD--------EG------SKQP-LPKL  286 (454)
T ss_dssp             E------ECCCT-----------------T-C--------------BHHHHHHSH--------HH------HTCC-HHHH
T ss_pred             E------EeecC-----------------C-C--------------cHHHHHHhc--------cC------CCCC-HHHH
Confidence            1      11110                 0 0              000000000        00      0000 0000


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      +       .                 +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       287 ~-------~-----------------~~~q---i~~~l~~LH--~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~~~  334 (454)
T 1qcf_A          287 I-------D-----------------FSAQ---IAEGMAFIE--QRNYIHRDLRAANILVS---ASLVCKIADFGLARVI  334 (454)
T ss_dssp             H-------H-----------------HHHH---HHHHHHHHH--HTTCCCSSCSGGGEEEC---TTCCEEECSTTGGGGB
T ss_pred             H-------H-----------------HHHH---HHHHHHHHH--hCCccCCCCCHHHEEEC---CCCcEEEeeCCCceEc
Confidence            0       0                 2333   677788888  99999999999999994   4457999999999754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......+|+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+           
T Consensus       335 ~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~el~t~g~~P~~~~~-----------  390 (454)
T 1qcf_A          335 EDNEYT-------AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-----------  390 (454)
T ss_dssp             CCHHHH-------TTCSSSSCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------
T ss_pred             CCCcee-------ccCCCcccccccCHHHhcc------CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-----------
Confidence            321100       0123457889999999973      468999999999999999999 999998753           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                          ...+...+..+ +.++..  ..+++++.+||.+||..||.+|||++++++
T Consensus       391 ----~~~~~~~i~~~-~~~~~~--~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          391 ----NPEVIRALERG-YRMPRP--ENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             ----HHHHHHHHHHT-CCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----HHHHHHHHHcC-CCCCCC--CCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                23344555554 233322  468999999999999999999999999875

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-34  Score=293.50  Aligned_cols=266  Identities=20%  Similarity=0.249  Sum_probs=163.1

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhh-cCCCCeeeeeeeeccccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHC-QGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~-~~HpnIv~l~~~~~~~~~  120 (539)
                      ...+.+.|++ .+.||+|+||.||+|.+.  ++.||||++...   ......+|.+++... .+||||+++++++.+...
T Consensus        32 ~~~~~~~y~~-~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           32 QRTIAKQIQM-VKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             HTTHHHHCEE-EEEEEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             ccccccceEE-EeEeecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            4456677876 578999999999999864  889999998542   234556677666553 379999999998866532


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ..            ..+.+          +.++.-+ +              .+...+           ..      ...
T Consensus       106 ~~------------~~~~l----------v~e~~~~-g--------------~L~~~l-----------~~------~~~  131 (337)
T 3mdy_A          106 SW------------TQLYL----------ITDYHEN-G--------------SLYDYL-----------KS------TTL  131 (337)
T ss_dssp             GG------------CEEEE----------EECCCTT-C--------------BHHHHH-----------HH------CCB
T ss_pred             CC------------CceEE----------EEeccCC-C--------------cHHHHh-----------hc------cCC
Confidence            11            00000          1111000 0              000000           00      000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh--------CCCCCCCCCCceeecCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ--------GIAHRDLKPENILCVHPDQL  272 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~--------gIvHRDlKpeNiL~~~~~~~  272 (539)
                      + ...+|                        .+..+   ++.++.|+|  ++        ||+||||||+|||+.   ..
T Consensus       132 ~-~~~~~------------------------~i~~~---i~~~l~~lH--~~~~~~~~~~~ivH~Dikp~Nill~---~~  178 (337)
T 3mdy_A          132 D-AKSML------------------------KLAYS---SVSGLCHLH--TEIFSTQGKPAIAHRDLKSKNILVK---KN  178 (337)
T ss_dssp             C-HHHHH------------------------HHHHH---HHHHHHHHH--SCBCSTTCBCCEECSCCCGGGEEEC---TT
T ss_pred             C-HHHHH------------------------HHHHH---HHHHHHHHH--HhhhhhccCCCEEecccchHHEEEC---CC
Confidence            0 00000                        02333   667778888  66        999999999999994   44


Q ss_pred             CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCc------ccchhhhhHHHHHHHhC
Q psy16343        273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK------RCDLWSLGVVVYILLCG  346 (539)
Q Consensus       273 ~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~------~~DiWSlGvily~ll~G  346 (539)
                      +.+||+|||++..........    .....+.+||+.|+|||++..      ..++.      ++|||||||++|+|++|
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEV----DIPPNTRVGTKRYMPPEVLDE------SLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             SCEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTT------CCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCceeeccccccc----cCCCCCCccCcceeChhhccc------ccCCccccCccccchHHHHHHHHHHHhc
Confidence            579999999987543222110    001235689999999999964      22333      38999999999999999


Q ss_pred             ----------CCCCCCCCCCCCCcccCccchhhHHHHHHHHhcCC--CCCCCCC-CCCCCHHHHHHHHHhccccccCCCC
Q psy16343        347 ----------YPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGH--YDFPEGE-WSTISDEAKDLIRRLLVKDARKRLS  413 (539)
Q Consensus       347 ----------~~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~p~~~-~~~~s~~~~dli~~lL~~dP~~R~t  413 (539)
                                ..||......+.          ........+....  ..+|... ...+++++.+||.+||..||.+|||
T Consensus       249 ~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  318 (337)
T 3mdy_A          249 CVSGGIVEEYQLPYHDLVPSDP----------SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT  318 (337)
T ss_dssp             BCBTTBCCCCCCTTTTTSCSSC----------CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred             cCcccccccccccHhhhcCCCC----------chhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCC
Confidence                      556554322211          1122222222222  2222110 1235678999999999999999999


Q ss_pred             HHHHhcC
Q psy16343        414 AASVLKH  420 (539)
Q Consensus       414 a~e~l~H  420 (539)
                      ++|+++|
T Consensus       319 ~~ell~~  325 (337)
T 3mdy_A          319 ALRVKKT  325 (337)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999976

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-34  Score=298.31  Aligned_cols=251  Identities=20%  Similarity=0.278  Sum_probs=159.1

Q ss_pred             CceeceeCceEEEEEEEccCC---cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTE---LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~---~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      .+.||+|+||.||+|....++   ..||||++++... ....++.+|+.++.++ +||||+++++++.......      
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~------  166 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSP------  166 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCC------
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCe------
Confidence            468999999999999876543   4689999865332 2346788999999987 5999999999864332111      


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                              ++           +.++--+ +              .+...+..               ..... ...+++.
T Consensus       167 --------~l-----------v~e~~~~-g--------------~L~~~l~~---------------~~~~~-~~~~~~~  196 (373)
T 3c1x_A          167 --------LV-----------VLPYMKH-G--------------DLRNFIRN---------------ETHNP-TVKDLIG  196 (373)
T ss_dssp             --------EE-----------EEECCTT-C--------------BHHHHHHC---------------TTCCC-BHHHHHH
T ss_pred             --------EE-----------EEECCCC-C--------------CHHHHHhh---------------cccCC-CHHHHHH
Confidence                    00           1111000 0              00000000               00000 0000110


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                              +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++....
T Consensus       197 ------------------------i~~q---i~~aL~~LH--~~~ivHrDlkp~NIll~---~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          197 ------------------------FGLQ---VAKGMKFLA--SKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             ------------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEECCC--------
T ss_pred             ------------------------HHHH---HHHHHHHHH--HCCEecCccchheEEEC---CCCCEEEeeccccccccc
Confidence                                    2233   667788888  99999999999999994   445799999999975432


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccch
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .....    ........||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+..+          
T Consensus       245 ~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~----------  304 (373)
T 3c1x_A          245 KEFDS----VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----------  304 (373)
T ss_dssp             -----------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC----------
T ss_pred             ccccc----ccccCCCCCcccccChHHhcC------CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH----------
Confidence            21100    001224568899999999874      468999999999999999999 788887654322          


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           +...+..+.....+   ..+++++.+||.+||..||.+|||++|++++
T Consensus       305 -----~~~~~~~~~~~~~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          305 -----ITVYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             -----HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----HHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 33344444432222   3579999999999999999999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.3e-35  Score=298.85  Aligned_cols=271  Identities=18%  Similarity=0.208  Sum_probs=173.1

Q ss_pred             chhcccCceeceeCceEEEEEE----EccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~----~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.|++ .+.||+|+||.||+|+    +..+++.||||++.+........+.+|++++.++ +||||+++++++.......
T Consensus        23 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           23 RHLKY-ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCE
T ss_pred             hhhhh-hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCce
Confidence            45655 5789999999999998    5678899999999765444456688999999997 6999999999875432110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                    +.          -+.++--+ +              .+...+..        ..       ...+ 
T Consensus       101 --------------~~----------lv~e~~~~-~--------------~L~~~l~~--------~~-------~~~~-  125 (327)
T 3lxl_A          101 --------------LR----------LVMEYLPS-G--------------CLRDFLQR--------HR-------ARLD-  125 (327)
T ss_dssp             --------------EE----------EEEECCTT-C--------------BHHHHHHH--------HG-------GGCC-
T ss_pred             --------------EE----------EEEeecCC-C--------------CHHHHHHh--------cc-------cCCC-
Confidence                          00          01111000 0              00000000        00       0000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...+|                        .|..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       126 ~~~~~------------------------~i~~q---i~~al~~lH--~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~  173 (327)
T 3lxl_A          126 ASRLL------------------------LYSSQ---ICKGMEYLG--SRRCVHRDLAARNILVES---EAHVKIADFGL  173 (327)
T ss_dssp             HHHHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEEE---TTEEEECCGGG
T ss_pred             HHHHH------------------------HHHHH---HHHHHHHHH--hCCccCCCCChhhEEECC---CCCEEEccccc
Confidence            00000                        02333   667788888  999999999999999954   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      +..........     .......||+.|+|||++.+      ..|+.++|||||||++|+|++|..||............
T Consensus       174 ~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~  242 (327)
T 3lxl_A          174 AKLLPLDKDYY-----VVREPGQSPIFWYAPESLSD------NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG  242 (327)
T ss_dssp             CEECCTTCSEE-----ECSSCCCSCGGGSCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC
T ss_pred             ceecccCCccc-----eeeccCCccccccCHHHhcc------CCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc
Confidence            87543222100     01234578999999999864      45888999999999999999999999754211000000


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ..........+...+..+. ..+.  ...+++++++||.+||..||.+|||++|+++|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          243 CERDVPALSRLLELLEEGQ-RLPA--PPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             ----CCHHHHHHHHHHTTC-CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccccccHHHHHHHhhccc-CCCC--CCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            0000001122333333332 1121  24689999999999999999999999999654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3.4e-34  Score=290.96  Aligned_cols=268  Identities=16%  Similarity=0.169  Sum_probs=166.3

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|.+ .+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++..+ .||||+++++++.+....+  
T Consensus        29 ~~~y~~-~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~--  103 (326)
T 3uim_A           29 SDNFSN-KNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERL--  103 (326)
T ss_dssp             TTSSCS-TTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEECCSSCCE--
T ss_pred             hhcccc-ceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEEecCCceE--
Confidence            345554 57899999999999974 4688999999965322 2233688999999886 5999999999987654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                      +.++--+ +              .+...           +..... .....+ ..
T Consensus       104 --l----------------------v~e~~~~-~--------------~L~~~-----------l~~~~~-~~~~~~-~~  131 (326)
T 3uim_A          104 --L----------------------VYPYMAN-G--------------SVASC-----------LRERPE-SQPPLD-WP  131 (326)
T ss_dssp             --E----------------------EEECCTT-C--------------BHHHH-----------HHCCST-TCCCCC-HH
T ss_pred             --E----------------------EEEeccC-C--------------CHHHH-----------HHhccc-cCCCCC-HH
Confidence              1                      1111000 0              00000           000000 000000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhh---CCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQ---GIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~---gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                      .++   .                     +..+   ++.++.|+|  ++   ||+||||||+|||+.   ..+.+||+|||
T Consensus       132 ~~~---~---------------------i~~~---i~~~l~~lH--~~~~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg  179 (326)
T 3uim_A          132 KRQ---R---------------------IALG---SARGLAYLH--DHCDPKIIHRDVKAANILLD---EEFEAVVGDFG  179 (326)
T ss_dssp             HHH---H---------------------HHHH---HHHHHHHHH--HSSSSCEECCCCSGGGEEEC---TTCCEEECCCS
T ss_pred             HHH---H---------------------HHHH---HHHHHHHHH--hCCCCCeEeCCCchhhEEEC---CCCCEEeccCc
Confidence            000   0                     2233   667788888  88   999999999999994   44569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +++.......       ......+||+.|+|||++..      ..|+.++|||||||++|+|++|.+||.........  
T Consensus       180 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--  244 (326)
T 3uim_A          180 LAKLMDYKDT-------HVTTAVRGTIGHIAPEYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD--  244 (326)
T ss_dssp             SCEECCSSSS-------CEECCCCSCGGGCCHHHHHH------SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS--
T ss_pred             cccccCcccc-------cccccccCCcCccCHHHhcc------CCCCccccchhHHHHHHHHHhCCCccccccccccc--
Confidence            9875432221       12235679999999999864      35889999999999999999999999621100000  


Q ss_pred             cCccchhhHHHHHHHH-hcCC------CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCC
Q psy16343        362 RGETCHACQEILFHSI-QQGH------YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW  422 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i-~~~~------~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw  422 (539)
                       .    .......... ....      ...+.......+.++.+||.+||..||.+|||+.|+++|-+
T Consensus       245 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          245 -D----VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             -C----SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             -c----hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence             0    0000000000 0000      00111111223478999999999999999999999999854

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.7e-34  Score=290.54  Aligned_cols=254  Identities=20%  Similarity=0.296  Sum_probs=165.2

Q ss_pred             cCceeceeCceEEEEEEEccCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .++.||+|+||.||+|..  ++..||||++....    ......+.+|++++..+ +||||+++++++.+....+    +
T Consensus        35 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~----l  107 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLC----L  107 (307)
T ss_dssp             TCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE----E
T ss_pred             cCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceE----E
Confidence            468999999999999975  68899999986432    12346788999999997 5999999999987654322    1


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            +.++.-+ +              .+...+..        ...     ....+ ...++
T Consensus       108 ----------------------v~e~~~~-~--------------~L~~~l~~--------~~~-----~~~~~-~~~~~  136 (307)
T 2nru_A          108 ----------------------VYVYMPN-G--------------SLLDRLSC--------LDG-----TPPLS-WHMRC  136 (307)
T ss_dssp             ----------------------EEECCTT-C--------------BHHHHHHT--------GGG-----CCCCC-HHHHH
T ss_pred             ----------------------EEEecCC-C--------------cHHHHHHh--------ccC-----CCCCC-HHHHH
Confidence                                  1111000 0              00000000        000     00000 00000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                              .+..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++....
T Consensus       137 ------------------------~i~~~---i~~~l~~lH--~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~~~  184 (307)
T 2nru_A          137 ------------------------KIAQG---AANGINFLH--ENHHIHRDIKSANILLD---EAFTAKISDFGLARASE  184 (307)
T ss_dssp             ------------------------HHHHH---HHHHHHHHH--HTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECC
T ss_pred             ------------------------HHHHH---HHHHHHHHh--cCCeecCCCCHHHEEEc---CCCcEEEeecccccccc
Confidence                                    02233   667778888  99999999999999994   44579999999987543


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      ....      .......+||+.|+|||++.+       .|+.++|+|||||++|+|++|.+||.+.......        
T Consensus       185 ~~~~------~~~~~~~~g~~~y~aPE~~~~-------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--------  243 (307)
T 2nru_A          185 KFAQ------TVMTSRIVGTTAYMAPEALRG-------EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL--------  243 (307)
T ss_dssp             SCSS------CEECSSCCSCGGGCCHHHHTT-------EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT--------
T ss_pred             cccc------cccccccCCCcCcCChHHhcC-------CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH--------
Confidence            2111      011234689999999999852       4788999999999999999999999875432211        


Q ss_pred             hhHHHHHHHHhcCCCC--------CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        368 ACQEILFHSIQQGHYD--------FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~--------~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ..+...+......        ++. .....+.++.+||.+||..||.+|||+++++++
T Consensus       244 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          244 ---LDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             ---THHHHHHHTTSCCHHHHSCSSCSC-CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ---HHHHHHhhhhhhhhhhhccccccc-cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence               0111222221110        110 112345788999999999999999999999865

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=7.8e-35  Score=296.80  Aligned_cols=183  Identities=21%  Similarity=0.306  Sum_probs=111.5

Q ss_pred             chhhhHHHhhhhh---------CCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCccc
Q psy16343        240 HACQEILFHSIQQ---------GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF  310 (539)
Q Consensus       240 ~~~~~~~~h~h~~---------gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y  310 (539)
                      ++.++.|+|  ++         ||+||||||+|||+.   ..+.+||+|||+++..................+.+||+.|
T Consensus       120 i~~~L~~LH--~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y  194 (336)
T 3g2f_A          120 VTRGLAYLH--TELPRGDHYKPAISHRDLNSRNVLVK---NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY  194 (336)
T ss_dssp             HHHHHHHHH--CCBCCGGGCBCCEECSSCSGGGEEEC---TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGG
T ss_pred             HHHHHHHHH--hhhccccccccceeecccccceEEEc---CCCcEEEeeccceeecccccccCccccccccccCCCccce
Confidence            667788888  77         999999999999994   4457999999999755432211111111223456899999


Q ss_pred             ccchhhcccCCC-CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC-CCCCcccCc--cchhhHHHHHHHHhc--CCCCC
Q psy16343        311 MAPEIVNAFMGP-EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG-EDCGWQRGE--TCHACQEILFHSIQQ--GHYDF  384 (539)
Q Consensus       311 ~APEvl~~~~~~-~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~-~~~~~~~~~--~~~~~~~~~~~~i~~--~~~~~  384 (539)
                      +|||++.+.... ....|+.++|||||||++|+|++|..||..... .+.......  ......+.....+..  ....+
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (336)
T 3g2f_A          195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKF  274 (336)
T ss_dssp             CCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCC
T ss_pred             eCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCC
Confidence            999998631000 002356789999999999999999766544322 211100000  000001111111111  12333


Q ss_pred             CCC--CCCCCCHHHHHHHHHhccccccCCCCHHHH------hcCCCccCCC
Q psy16343        385 PEG--EWSTISDEAKDLIRRLLVKDARKRLSAASV------LKHPWISTAG  427 (539)
Q Consensus       385 p~~--~~~~~s~~~~dli~~lL~~dP~~R~ta~e~------l~Hpw~~~~~  427 (539)
                      |..  .+...++++++||.+||..||++|||++|+      +.++|-++..
T Consensus       275 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~  325 (336)
T 3g2f_A          275 PEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS  325 (336)
T ss_dssp             CTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred             CcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence            332  112255689999999999999999999999      4588887654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.6e-34  Score=313.00  Aligned_cols=249  Identities=20%  Similarity=0.317  Sum_probs=167.2

Q ss_pred             eeceeCceEEEEEEEcc--CCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         55 ILGKGAYASVQTCVNIL--TELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~--t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .||+|+||.||+|....  ++..||||++++.. ......+.+|+++|..+ +|||||++++++.++. .+    +    
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~~~-~~----l----  412 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEA-LM----L----  412 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEESSS-EE----E----
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEeccCC-eE----E----
Confidence            69999999999998763  55679999997543 23467889999999987 6999999999986532 11    1    


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhH
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGV  211 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gv  211 (539)
                                        |.+|--+ +              .+...+..               .....+ ...++    
T Consensus       413 ------------------v~E~~~~-g--------------~L~~~l~~---------------~~~~l~-~~~~~----  439 (613)
T 2ozo_A          413 ------------------VMEMAGG-G--------------PLHKFLVG---------------KREEIP-VSNVA----  439 (613)
T ss_dssp             ------------------EEECCTT-C--------------BHHHHHTT---------------CTTTSC-HHHHH----
T ss_pred             ------------------EEEeCCC-C--------------cHHHHHhh---------------ccCCCC-HHHHH----
Confidence                              1111000 0              00000000               000000 00000    


Q ss_pred             HHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCC
Q psy16343        212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS  291 (539)
Q Consensus       212 il~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~  291 (539)
                         .                 +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+++.+.....
T Consensus       440 ---~-----------------i~~q---i~~~L~~LH--~~~iiHrDlkp~NILl~~---~~~vkL~DFGla~~~~~~~~  491 (613)
T 2ozo_A          440 ---E-----------------LLHQ---VSMGMKYLE--EKNFVHRNLAARNVLLVN---RHYAKISDFGLSKALGADDS  491 (613)
T ss_dssp             ---H-----------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEEE---TTEEEECCCSTTTTCC----
T ss_pred             ---H-----------------HHHH---HHHHHHHHH--HCCEEcCcCCHHHEEEcC---CCcEEEeeccCcccccCCCc
Confidence               0                 2333   677888888  999999999999999954   45699999999986533221


Q ss_pred             CCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhhH
Q psy16343        292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQ  370 (539)
Q Consensus       292 ~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~~  370 (539)
                      ...     ......||+.|+|||++..      ..|+.++|||||||++|+|++ |..||.+.+.               
T Consensus       492 ~~~-----~~~~~~~~~~y~APE~~~~------~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~---------------  545 (613)
T 2ozo_A          492 YYT-----ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG---------------  545 (613)
T ss_dssp             ---------------CCTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS---------------
T ss_pred             eee-----eccCCCCccceeCHhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH---------------
Confidence            100     1123356789999999963      468999999999999999998 9999987542               


Q ss_pred             HHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh---cCCCcc
Q psy16343        371 EILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL---KHPWIS  424 (539)
Q Consensus       371 ~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l---~Hpw~~  424 (539)
                      ..+...|..+. ..+|    ..+++++.+||.+||..||.+||++++++   ++.|+.
T Consensus       546 ~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          546 PEVMAFIEQGKRMECP----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             HHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            23556666654 2333    36899999999999999999999999875   444443

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.5e-34  Score=288.37  Aligned_cols=254  Identities=19%  Similarity=0.247  Sum_probs=164.0

Q ss_pred             cchhcccCceeceeCceEEEEEEEcc-CCc--EEEEEEeccCC---CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNIL-TEL--EYAVKIIDKLP---GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~-t~~--~vAvK~i~k~~---~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .+.|++ .+.||+|+||.||+|.+.. ++.  .||||++....   ......+.+|++++..+ +||||+++++++.+..
T Consensus        17 ~~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   94 (291)
T 1u46_A           17 EKDLRL-LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP   94 (291)
T ss_dssp             GGGEEE-EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred             hhHeee-eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC
Confidence            345665 5789999999999998643 333  68999986432   22345788999999997 5999999999987543


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~  198 (539)
                      .+     +                      +.++.-+ +              .+...+.. ......+           
T Consensus        95 ~~-----~----------------------v~e~~~~-~--------------~L~~~l~~~~~~~~~~-----------  121 (291)
T 1u46_A           95 MK-----M----------------------VTELAPL-G--------------SLLDRLRKHQGHFLLG-----------  121 (291)
T ss_dssp             CE-----E----------------------EEECCTT-C--------------BHHHHHHHHGGGSCHH-----------
T ss_pred             ce-----e----------------------eEecccC-C--------------CHHHHHHhccCCcCHH-----------
Confidence            11     1                      1111000 0              00000000 0000000           


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                            .+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+
T Consensus       122 ------~~~~------------------------~~~~---i~~~l~~lH--~~~i~H~dikp~Nili~~---~~~~kl~  163 (291)
T 1u46_A          122 ------TLSR------------------------YAVQ---VAEGMGYLE--SKRFIHRDLAARNLLLAT---RDLVKIG  163 (291)
T ss_dssp             ------HHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEEEE---TTEEEEC
T ss_pred             ------HHHH------------------------HHHH---HHHHHHHHH--hCCcccCCCchheEEEcC---CCCEEEc
Confidence                  0000                        2233   667788888  899999999999999954   3469999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED  357 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~  357 (539)
                      |||++..........     .......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+   
T Consensus       164 Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~---  229 (291)
T 1u46_A          164 DFGLMRALPQNDDHY-----VMQEHRKVPFAWCAPESLKT------RTFSHASDTWMFGVTLWEMFTYGQEPWIGLN---  229 (291)
T ss_dssp             CCTTCEECCC-CCEE-----EC-----CCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC---
T ss_pred             cccccccccccccch-----hhhccCCCCceeeCchhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCcccCC---
Confidence            999987543322100     01224578899999999864      458889999999999999999 999998653   


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  ...+...+......++.  ...+++++++||.+||..||.+|||+.+++++
T Consensus       230 ------------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          230 ------------GSQILHKIDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             ------------HHHHHHHHHTSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------HHHHHHHHHccCCCCCC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                        23355566555444443  24689999999999999999999999999974

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=6.9e-35  Score=294.74  Aligned_cols=271  Identities=21%  Similarity=0.289  Sum_probs=169.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+..+++.||||++..........+.+|++++..+ +||||+++++++........   
T Consensus        29 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~---  103 (317)
T 2buj_A           29 KHYLF-IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKH---  103 (317)
T ss_dssp             EEEEE-EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEE---
T ss_pred             eEEEE-EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCc---
Confidence            45665 57899999999999999999999999998654434456788999999987 69999999998864221100   


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                               .+.          -+.++--+ +              .+...           +..... .....+ ...+
T Consensus       104 ---------~~~----------lv~e~~~~-~--------------~L~~~-----------l~~~~~-~~~~~~-~~~~  136 (317)
T 2buj_A          104 ---------EAW----------LLLPFFKR-G--------------TLWNE-----------IERLKD-KGNFLT-EDQI  136 (317)
T ss_dssp             ---------EEE----------EEEECCTT-C--------------BHHHH-----------HHHHHT-TTCCCC-HHHH
T ss_pred             ---------eeE----------EEEEeCCC-C--------------cHHHH-----------HHHHHh-cCCCCC-HHHH
Confidence                     000          01111000 0              00000           000000 000000 0001


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      |.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++...
T Consensus       137 ~~------------------------i~~q---i~~~L~~LH--~~~ivH~dlkp~NIl~~---~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          137 LW------------------------LLLG---ICRGLEAIH--AKGYAHRDLKPTNILLG---DEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             HH------------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTSCEEECCCSSCEES
T ss_pred             HH------------------------HHHH---HHHHHHHHH--hCCcccCCCCHHHEEEc---CCCCEEEEecCcchhc
Confidence            10                        2333   667788888  89999999999999994   4456999999987643


Q ss_pred             ccCCCCCC-CCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHS-PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~-~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ........ ...........||+.|+|||++...   ....|+.++|||||||++|+|++|..||.+.....        
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------  253 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ---SHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--------  253 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC---SEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--------
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccC---CCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--------
Confidence            21100000 0000001234689999999998631   11236889999999999999999999996421100        


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                           ..+...+.. ...+|.  ...+++++++||.+||..||.+|||++++++|
T Consensus       254 -----~~~~~~~~~-~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          254 -----DSVALAVQN-QLSIPQ--SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -----SCHHHHHHC-C--CCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----chhhHHhhc-cCCCCc--cccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                 012222222 333333  24689999999999999999999999999987

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=8.6e-35  Score=294.81  Aligned_cols=273  Identities=21%  Similarity=0.201  Sum_probs=171.2

Q ss_pred             ccccchhcccCceeceeCceEEEEEE----EccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         43 SCFQDLYRLKGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        43 ~~f~~~y~~~~~~LG~G~fG~V~~~~----~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      ..|.+.|....+.||+|+||.||+|.    +..+++.||||++.+... .....+.+|++++..+. ||||+++++++.+
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~  104 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCED  104 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCC-CcchhhEEEEEec
Confidence            34677773336789999999998775    345788999999975432 23456889999999975 9999999999876


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ......  .++     +|.+-                 + +              .+...+..                 
T Consensus       105 ~~~~~~--~lv-----~e~~~-----------------~-~--------------~L~~~l~~-----------------  128 (318)
T 3lxp_A          105 AGAASL--QLV-----MEYVP-----------------L-G--------------SLRDYLPR-----------------  128 (318)
T ss_dssp             TTTTEE--EEE-----ECCCT-----------------T-C--------------BHHHHGGG-----------------
T ss_pred             CCCceE--EEE-----Eeccc-----------------C-C--------------cHHHHHhh-----------------
Confidence            421100  010     11110                 0 0              00000000                 


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      ...+ ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||
T Consensus       129 ~~~~-~~~~~~------------------------i~~~---l~~~l~~LH--~~~ivH~Dikp~Nil~~---~~~~~kl  175 (318)
T 3lxp_A          129 HSIG-LAQLLL------------------------FAQQ---ICEGMAYLH--AQHYIHRDLAARNVLLD---NDRLVKI  175 (318)
T ss_dssp             SCCC-HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCEEE
T ss_pred             CCCC-HHHHHH------------------------HHHH---HHHHHHHHH--hCCccCCCCchheEEEc---CCCCEEE
Confidence            0000 000110                        2333   667788888  99999999999999994   4467999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||++..........     .......||+.|+|||++..      ..|+.++|||||||++|+|++|..||.......
T Consensus       176 ~Dfg~a~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~  244 (318)
T 3lxp_A          176 GDFGLAKAVPEGHEYY-----RVREDGDSPVFWYAPECLKE------YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF  244 (318)
T ss_dssp             CCGGGCEECCTTCSEE-----EC---CCCCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred             CCcccccccccccccc-----ccccCCCCCceeeChHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCcccccchhh
Confidence            9999987553322100     01234578999999999974      457889999999999999999999997532100


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ..+............+...+..+. ..+.  ...+++++.+||.+||..||.+|||++|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          245 LELIGIAQGQMTVLRLTELLERGE-RLPR--PDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHCSCCHHHHHHHHHHHHHTTC-CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhcccccchhHHHHHHHHhccc-CCCC--CccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            000000000001112223333332 2221  2468999999999999999999999999984

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=299.00  Aligned_cols=253  Identities=16%  Similarity=0.216  Sum_probs=162.0

Q ss_pred             hhcccCceeceeCceEEEEE-----EEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcC--CCCeeeeeeeeccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTC-----VNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG--HPNIIQLLEYYEDDEN  120 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~-----~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~--HpnIv~l~~~~~~~~~  120 (539)
                      .|.+ .+.||+|+||.||+|     .+..+++.||||++...   ....+.+|++++..+..  |+||+++++++.....
T Consensus        66 ~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           66 LVYV-HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             EEEE-EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             EEEE-EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            3554 468999999999999     46788999999999653   35567788888876532  8999999999876544


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-                 + +              .+...+           ...........
T Consensus       142 ~~---lv------~e~~~-----------------~-g--------------~L~~~l-----------~~~~~~~~~~l  169 (365)
T 3e7e_A          142 SV---LV------GELYS-----------------Y-G--------------TLLNAI-----------NLYKNTPEKVM  169 (365)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHH-----------HHHHTSTTCSC
T ss_pred             cE---EE------EeccC-----------------C-C--------------cHHHHH-----------HHhhcccccCC
Confidence            33   11      11110                 0 0              000000           00000000000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecC--------CCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVH--------PDQL  272 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~--------~~~~  272 (539)
                          +   ...++                  .+..|   ++.++.|+|  ++|||||||||+|||+..        .+..
T Consensus       170 ----~---~~~~~------------------~i~~q---i~~~L~~lH--~~~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          170 ----P---QGLVI------------------SFAMR---MLYMIEQVH--DCEIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             ----C---HHHHH------------------HHHHH---HHHHHHHHH--TTTEECCCCSGGGEEECGGGTCC------C
T ss_pred             ----C---HHHHH------------------HHHHH---HHHHHHHHh--hCCeecCCCCHHHEEecccccCcccccccc
Confidence                0   00000                  03334   677788888  899999999999999965        1225


Q ss_pred             CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  352 (539)
Q Consensus       273 ~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~  352 (539)
                      +.+||+|||+|+.......      .....+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|++||..
T Consensus       220 ~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPK------GTIFTAKCETSGFQCVEMLSN------KPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCT------TEEECCSSCTTSCCCHHHHTT------CCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             CCEEEeeCchhhhhhccCC------CceeeeecCCCCCCChHHhcC------CCCCccccHHHHHHHHHHHHhCCCcccc
Confidence            6799999999975432111      112356789999999999963      4689999999999999999999999975


Q ss_pred             CCCCCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCC
Q psy16343        353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP  421 (539)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hp  421 (539)
                      .....  +.               +   ...++.   ...++...+++.+||..||.+|++..+.+.+.
T Consensus       288 ~~~~~--~~---------------~---~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          288 NEGGE--CK---------------P---EGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             EETTE--EE---------------E---CSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             CCCCc--ee---------------e---chhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            43211  00               0   011111   12467889999999999999998765555543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4.1e-34  Score=283.71  Aligned_cols=242  Identities=19%  Similarity=0.269  Sum_probs=160.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+  +|+.||||+++...  ....+.+|++++..+ +||||+++++++.+.....   .
T Consensus        21 ~~y~~-~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~---~   91 (278)
T 1byg_A           21 KELKL-LQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGL---Y   91 (278)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CC---E
T ss_pred             hhceE-EeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCce---E
Confidence            44555 47899999999999976  58899999996432  456788999999987 5999999999865432111   0


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC--CcccccccccccCCCCCCCCccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA--EFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~--~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      +                      +.++--+ +              .+...+...  .....                 .
T Consensus        92 l----------------------v~e~~~~-~--------------~L~~~l~~~~~~~~~~-----------------~  117 (278)
T 1byg_A           92 I----------------------VTEYMAK-G--------------SLVDYLRSRGRSVLGG-----------------D  117 (278)
T ss_dssp             E----------------------EECCCTT-E--------------EHHHHHHHHHHHHCCH-----------------H
T ss_pred             E----------------------EEecCCC-C--------------CHHHHHHhcccccCCH-----------------H
Confidence            1                      1111000 0              000000000  00000                 0


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .+|       .                 +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||++.
T Consensus       118 ~~~-------~-----------------~~~~---i~~~l~~lH--~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~  165 (278)
T 1byg_A          118 CLL-------K-----------------FSLD---VCEAMEYLE--GNNFVHRDLAARNVLVS---EDNVAKVSDFGLTK  165 (278)
T ss_dssp             HHH-------H-----------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTSCEEECCCCC--
T ss_pred             HHH-------H-----------------HHHH---HHHHHHHHH--hCCccccCCCcceEEEe---CCCcEEEeeccccc
Confidence            000       0                 2233   667778888  99999999999999994   44579999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      .....           .....||+.|+|||++..      ..|+.++|+|||||++|+|++ |.+||.+.+..       
T Consensus       166 ~~~~~-----------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-------  221 (278)
T 1byg_A          166 EASST-----------QDTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-------  221 (278)
T ss_dssp             ---------------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-------
T ss_pred             ccccc-----------ccCCCccccccCHHHhCC------CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-------
Confidence            43321           123468999999999863      468899999999999999998 99999765321       


Q ss_pred             ccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        364 ETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              .+...+..+. +.++    ..+++++++||.+||..||.+|||+.|+++
T Consensus       222 --------~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          222 --------DVVPRVEKGYKMDAP----DGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             --------GHHHHHTTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------HHHHHHhcCCCCCCc----ccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence                    2344554442 2222    468999999999999999999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1e-33  Score=301.12  Aligned_cols=253  Identities=19%  Similarity=0.267  Sum_probs=168.8

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+.. +..||||+++... .....+.+|+++|+++ +||||+++++++.++. .+   .
T Consensus       184 ~~~~~-~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~---i  255 (452)
T 1fmk_A          184 ESLRL-EVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSEEP-IY---I  255 (452)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CE---E
T ss_pred             hHcee-eeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCc-eE---E
Confidence            34454 4689999999999998864 4569999997533 3456789999999997 5999999999886521 11   0


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC--CCcccccccccccCCCCCCCCccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS--AEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt--~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      |      +|.+-                 + +              .+...+..  ...+..+                 
T Consensus       256 v------~e~~~-----------------~-g--------------sL~~~l~~~~~~~~~~~-----------------  280 (452)
T 1fmk_A          256 V------TEYMS-----------------K-G--------------SLLDFLKGETGKYLRLP-----------------  280 (452)
T ss_dssp             E------ECCCT-----------------T-C--------------BHHHHHSHHHHTTCCHH-----------------
T ss_pred             E------ehhhc-----------------C-C--------------CHHHHHHhcCCCCCCHH-----------------
Confidence            1      11110                 0 0              00000000  0000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++       .                 +..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++
T Consensus       281 ~~~-------~-----------------i~~q---i~~~l~~LH--~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~  328 (452)
T 1fmk_A          281 QLV-------D-----------------MAAQ---IASGMAYVE--RMNYVHRDLRAANILVG---ENLVCKVADFGLAR  328 (452)
T ss_dssp             HHH-------H-----------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC
T ss_pred             HHH-------H-----------------HHHH---HHHHHHHHH--hCCeeCCCCChhhEEEC---CCCCEEECCCccce
Confidence            000       0                 2333   667788888  99999999999999994   44579999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      ........       ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+..         
T Consensus       329 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwslG~~l~el~t~g~~P~~~~~---------  386 (452)
T 1fmk_A          329 LIEDNEYT-------ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMV---------  386 (452)
T ss_dssp             ---------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC---------
T ss_pred             ecCCCcee-------cccCCcccccccCHhHHhc------CCCCccccHHhHHHHHHHHHhCCCCCCCCCC---------
Confidence            54322110       1123457889999999873      468999999999999999999 999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc--CCCccC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK--HPWIST  425 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~--Hpw~~~  425 (539)
                            ...+...+..+. .++..  ..+++++.+||.+||..||++|||++++++  +.++..
T Consensus       387 ------~~~~~~~i~~~~-~~~~~--~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          387 ------NREVLDQVERGY-RMPCP--PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             ------HHHHHHHHHTTC-CCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             ------HHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence                  233455555542 22221  368999999999999999999999999886  455544

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1e-33  Score=289.00  Aligned_cols=270  Identities=22%  Similarity=0.289  Sum_probs=169.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhh-cCCCCeeeeeeeecccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHC-QGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~-~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.+.|++ .+.||+|+||.||+|.+  +++.||||++...   ....+.+|++++... .+||||+++++++....... 
T Consensus        40 ~~~~y~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~-  112 (342)
T 1b6c_B           40 IARTIVL-QESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW-  112 (342)
T ss_dssp             HHHHCEE-EEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC-
T ss_pred             ccccEEE-EeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc-
Confidence            5566776 57899999999999987  5899999999642   345678899988874 47999999999887653211 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                                 ..+.          -+.++.-+ +              .+...           +..      ...+ .
T Consensus       113 -----------~~~~----------lv~e~~~~-g--------------~L~~~-----------l~~------~~~~-~  138 (342)
T 1b6c_B          113 -----------TQLW----------LVSDYHEH-G--------------SLFDY-----------LNR------YTVT-V  138 (342)
T ss_dssp             -----------CCEE----------EEECCCTT-C--------------BHHHH-----------HHH------CCBC-H
T ss_pred             -----------ceeE----------EEEeecCC-C--------------cHHHH-----------Hhc------cCcc-H
Confidence                       0000          01111000 0              00000           000      0000 0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhh------hhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI------QQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h------~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                      ..+|.                        +..+   ++.++.|+|.+      ++||+||||||+|||+.   ..+.+||
T Consensus       139 ~~~~~------------------------i~~~---i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~---~~~~~kL  188 (342)
T 1b6c_B          139 EGMIK------------------------LALS---TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCI  188 (342)
T ss_dssp             HHHHH------------------------HHHH---HHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC---TTSCEEE
T ss_pred             HHHHH------------------------HHHH---HHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC---CCCCEEE
Confidence            00111                        2233   55666777732      78999999999999994   4457999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC----------C
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG----------Y  347 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G----------~  347 (539)
                      +|||++..........    .......+||+.|+|||++.+........++.++|||||||++|+|++|          .
T Consensus       189 ~Dfg~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          189 ADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CCCTTCEEEETTTTEE----EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             EECCCceecccccccc----ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            9999987543322100    0012356899999999998641100000233689999999999999999          7


Q ss_pred             CCCCCCCCCCCCcccCccchhhHHHHHHHHhcCCCC--CCCCCCC--CCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD--FPEGEWS--TISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       348 ~PF~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~~~--~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      .||.+....+.          ..+.+...+......  +|. .|.  ..++.+++||.+||..||++|||++|+++|
T Consensus       265 ~p~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          265 LPYYDLVPSDP----------SVEEMRKVVCEQKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CTTTTTSCSSC----------CHHHHHHHHTTSCCCCCCCG-GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cCccccCcCcc----------cHHHHHHHHHHHHhCCCCcc-cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            78876532211          123344444433322  221 121  234678999999999999999999999976

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=2.5e-33  Score=304.32  Aligned_cols=255  Identities=20%  Similarity=0.255  Sum_probs=172.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|.+.. +..||||+++... ...+.+.+|+++|+++ +|||||++++++.++. .+   .
T Consensus       267 ~~~~~-~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~-~~---l  338 (535)
T 2h8h_A          267 ESLRL-EVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSEEP-IY---I  338 (535)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CE---E
T ss_pred             hhhhh-heecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhC-CCCCEeeEEEEEeecc-ce---E
Confidence            34444 4689999999999998865 4679999997533 3457889999999997 5999999999886521 11   0


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |      +|.+-                 + +              .+...+..        ..      ....      
T Consensus       339 v------~e~~~-----------------~-g--------------sL~~~l~~--------~~------~~~l------  360 (535)
T 2h8h_A          339 V------TEYMS-----------------K-G--------------SLLDFLKG--------ET------GKYL------  360 (535)
T ss_dssp             E------ECCCT-----------------T-E--------------EHHHHHSH--------HH------HTTC------
T ss_pred             e------eehhc-----------------C-C--------------cHHHHHhh--------cC------CCCC------
Confidence            1      11110                 0 0              00000000        00      0000      


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       +...++ .                 +..+   ++.++.|+|  ++||+||||||+|||+.   ..+.+||+|||+++..
T Consensus       361 -~~~~~~-~-----------------i~~q---i~~~L~~LH--~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          361 -RLPQLV-D-----------------MAAQ---IASGMAYVE--RMNYVHRDLRAANILVG---ENLVCKVADFGLARLI  413 (535)
T ss_dssp             -CHHHHH-H-----------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTC
T ss_pred             -CHHHHH-H-----------------HHHH---HHHHHHHHH--hCCeeCCCCCHhhEEEc---CCCcEEEcccccceec
Confidence             000000 0                 2333   667788888  99999999999999994   4457999999999754


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......||..|+|||++..      ..|+.++|||||||++|+|++ |..||.+..           
T Consensus       414 ~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~-----------  469 (535)
T 2h8h_A          414 EDNEYT-------ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----------  469 (535)
T ss_dssp             CCHHHH-------TTCSTTSCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-----------
T ss_pred             CCCcee-------cccCCcCcccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----------
Confidence            321100       0123457889999999873      468999999999999999999 999998753           


Q ss_pred             chhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC--CCccC
Q psy16343        366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH--PWIST  425 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H--pw~~~  425 (539)
                          ...+...+..+. .++..  ..+++++.+||.+||..||++|||++++++.  .++..
T Consensus       470 ----~~~~~~~i~~~~-~~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          470 ----NREVLDQVERGY-RMPCP--PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             ----HHHHHHHHHTTC-CCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             ----HHHHHHHHHcCC-CCCCC--CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence                233555555542 22221  3689999999999999999999999998863  55543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.98  E-value=8.5e-33  Score=306.68  Aligned_cols=249  Identities=20%  Similarity=0.333  Sum_probs=167.2

Q ss_pred             hhcccCceeceeCceEEEEEEEccC---CcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILT---ELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t---~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .|++ ++.||+|+||.||+|.+..+   +..||||++..... .....+.+|+.++..+ +|||||++++++.++.. + 
T Consensus       391 ~y~i-~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~-~-  466 (656)
T 2j0j_A          391 RIEL-GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVITENPV-W-  466 (656)
T ss_dssp             GEEE-EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSC-E-
T ss_pred             cEEE-eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCce-E-
Confidence            3444 57899999999999998654   45799999864322 2235688999999987 59999999998854321 1 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                         +                      +.++--+ +              .+...           +..    .....+ .
T Consensus       467 ---l----------------------v~E~~~~-g--------------~L~~~-----------l~~----~~~~l~-~  490 (656)
T 2j0j_A          467 ---I----------------------IMELCTL-G--------------ELRSF-----------LQV----RKFSLD-L  490 (656)
T ss_dssp             ---E----------------------EEECCTT-C--------------BHHHH-----------HHH----TTTTCC-H
T ss_pred             ---E----------------------EEEcCCC-C--------------cHHHH-----------HHh----ccCCCC-H
Confidence               1                      1111000 0              00000           000    000000 0


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .+++   .                     +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||++
T Consensus       491 ~~~~---~---------------------i~~q---i~~aL~~LH--~~givHrDikp~NILl~~---~~~vkL~DFG~a  538 (656)
T 2j0j_A          491 ASLI---L---------------------YAYQ---LSTALAYLE--SKRFVHRDIAARNVLVSS---NDCVKLGDFGLS  538 (656)
T ss_dssp             HHHH---H---------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEEE---TTEEEECCCCCC
T ss_pred             HHHH---H---------------------HHHH---HHHHHHHHH--hCCccccccchHhEEEeC---CCCEEEEecCCC
Confidence            0000   0                     2333   667788888  899999999999999954   356999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      +........       ......||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+        
T Consensus       539 ~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--------  597 (656)
T 2j0j_A          539 RYMEDSTYY-------KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------  597 (656)
T ss_dssp             CSCCC-----------------CCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------
T ss_pred             eecCCCcce-------eccCCCCCcceeCHHHhcC------CCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--------
Confidence            765322110       1123467899999999964      468999999999999999997 999998753        


Q ss_pred             CccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        363 GETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ...+...+..+. ..+|    ..+++++.+||.+||..||.+|||+.|++++
T Consensus       598 -------~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          598 -------NNDVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             -------HHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------HHHHHHHHHcCCCCCCC----ccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                   223455565543 3333    3689999999999999999999999999853

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.98  E-value=5.3e-33  Score=282.54  Aligned_cols=269  Identities=19%  Similarity=0.199  Sum_probs=169.2

Q ss_pred             chhcccCceeceeCceEEEEEE----EccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCV----NILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~----~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.|++ .+.||+|+||.||+|.    +..+++.||||++..........+.+|++++..+ +||||+++++++.......
T Consensus        41 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           41 RHLKF-LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             GGEEE-EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----C
T ss_pred             HHcee-eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCc
Confidence            34554 5789999999999998    4668999999999765444456788999999997 5999999999876543110


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                                   ..+           +.++--+ +              .+...           +..    .....+ 
T Consensus       119 -------------~~l-----------v~e~~~~-~--------------~L~~~-----------l~~----~~~~~~-  143 (326)
T 2w1i_A          119 -------------LKL-----------IMEYLPY-G--------------SLRDY-----------LQK----HKERID-  143 (326)
T ss_dssp             -------------CEE-----------EECCCTT-C--------------BHHHH-----------HHH----STTSSC-
T ss_pred             -------------eEE-----------EEECCCC-C--------------CHHHH-----------HHh----cccCCC-
Confidence                         001           1111000 0              00000           000    000000 


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                      ...+|.                        +..+   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       144 ~~~~~~------------------------i~~q---i~~aL~~LH--~~~ivH~dikp~NIli~~---~~~~kL~Dfg~  191 (326)
T 2w1i_A          144 HIKLLQ------------------------YTSQ---ICKGMEYLG--TKRYIHRDLATRNILVEN---ENRVKIGDFGL  191 (326)
T ss_dssp             HHHHHH------------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEEEE---TTEEEECCCTT
T ss_pred             HHHHHH------------------------HHHH---HHHHHHHHH--hCCEeccCCCcceEEEcC---CCcEEEecCcc
Confidence            000000                        2233   667788888  999999999999999954   35699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc-c
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-Q  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~-~  361 (539)
                      +..........     .......||+.|+|||++.+      ..|+.++|||||||++|+|++|..||......-... .
T Consensus       192 ~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~  260 (326)
T 2w1i_A          192 TKVLPQDKEYY-----KVKEPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG  260 (326)
T ss_dssp             CEECCSSCSEE-----ECSSCCSCCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHC
T ss_pred             hhhcccccccc-----ccccCCCCceeEECchhhcC------CCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhc
Confidence            87543322100     01123467889999999874      358889999999999999999999986421000000 0


Q ss_pred             cCccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        362 RGETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                      ...........+...+..+ .+..|    ..+++++.+||.+||..||++|||+.|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          261 NDKQGQMIVFHLIELLKNNGRLPRP----DGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             TTCCTHHHHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccchhhhHHHHHHHhhcCCCCCCC----CcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            0000000011122333332 22222    468999999999999999999999999884

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.98  E-value=4.7e-33  Score=281.36  Aligned_cols=259  Identities=20%  Similarity=0.220  Sum_probs=166.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||.||+|.+..   .||+|++....  ......+.+|+.++..+ +||||+++++++.+....+  
T Consensus        33 ~~~~~-~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~--  105 (319)
T 2y4i_B           33 EQLEI-GELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLA--  105 (319)
T ss_dssp             SCEEC-CCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEE--
T ss_pred             HHeEE-eeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceE--
Confidence            34554 6789999999999998753   49999986432  22234567899999886 5999999999987654322  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+....               ...+ ..
T Consensus       106 -iv------~e~~~-----------------~-~--------------~L~~~l~~~~---------------~~~~-~~  130 (319)
T 2y4i_B          106 -II------TSLCK-----------------G-R--------------TLYSVVRDAK---------------IVLD-VN  130 (319)
T ss_dssp             -EE------CBCCC-----------------S-E--------------EHHHHTTSSC---------------CCCC-SH
T ss_pred             -EE------eeccc-----------------C-C--------------cHHHHHHhcC---------------CCCC-HH
Confidence             11      11110                 0 0              0000000000               0000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      ++|.                        +..+   ++.++.|+|  ++||+||||||+|||+.    .+.+||+|||+++
T Consensus       131 ~~~~------------------------i~~q---i~~al~~lH--~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~  177 (319)
T 2y4i_B          131 KTRQ------------------------IAQE---IVKGMGYLH--AKGILHKDLKSKNVFYD----NGKVVITDFGLFS  177 (319)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HTTCCCCCCCSTTEEEC------CCEECCCSCCC
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--hCCccccCCChhhEEEe----CCCEEEeecCCcc
Confidence            1111                        2333   667788888  99999999999999994    2469999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCC---CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP---EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~---~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      ........   ..........||+.|+|||++......   ....|+.++|||||||++|+|++|..||.+..       
T Consensus       178 ~~~~~~~~---~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------  247 (319)
T 2y4i_B          178 ISGVLQAG---RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-------  247 (319)
T ss_dssp             -------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-------
T ss_pred             cccccccc---ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------
Confidence            54221110   011123456799999999998642100   12357889999999999999999999997653       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                              .+.+...+..+.....  ....++.++.+||.+||..||.+|||++++++.
T Consensus       248 --------~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          248 --------AEAIIWQMGTGMKPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             --------HHHHHHHHHTTCCCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             --------HHHHHHHhccCCCCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                    2334445554432221  123578899999999999999999999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.6e-33  Score=311.73  Aligned_cols=246  Identities=20%  Similarity=0.273  Sum_probs=169.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEcc-CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNIL-TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~-t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||.||+|.+.. +++.||||++..... .....+.+|++++.++ +|||||++++++.......
T Consensus        78 ~~~~y~i-~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           78 VAGQYEV-KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             ETTTEEE-EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTS
T ss_pred             eCCceEE-EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCC
Confidence            4466776 4789999999999999976 789999999864322 2234678899999987 5999999999987654310


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      .          +...+           +.+|--+ +              .+......  .++.+               
T Consensus       156 ~----------~~~~l-----------v~E~~~g-~--------------~L~~~~~~--~l~~~---------------  182 (681)
T 2pzi_A          156 D----------PVGYI-----------VMEYVGG-Q--------------SLKRSKGQ--KLPVA---------------  182 (681)
T ss_dssp             C----------EEEEE-----------EEECCCC-E--------------ECC----C--CCCHH---------------
T ss_pred             C----------ceeEE-----------EEEeCCC-C--------------cHHHHHhC--CCCHH---------------
Confidence            0          00001           1122000 0              00000000  00000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                              .++.                  |..+   ++.++.|+|  ++|||||||||+|||+..    +.+||+|||+
T Consensus       183 --------~~~~------------------~~~q---i~~aL~~lH--~~giiHrDlkp~NIll~~----~~~kl~DFG~  227 (681)
T 2pzi_A          183 --------EAIA------------------YLLE---ILPALSYLH--SIGLVYNDLKPENIMLTE----EQLKLIDLGA  227 (681)
T ss_dssp             --------HHHH------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEECS----SCEEECCCTT
T ss_pred             --------HHHH------------------HHHH---HHHHHHHHH--HCCCeecccChHHeEEeC----CcEEEEeccc
Confidence                    0000                  2333   677888888  999999999999999954    2699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      ++.....            .+.+||+.|+|||++..       +++.++|||||||++|+|++|.+||.+......    
T Consensus       228 a~~~~~~------------~~~~gt~~y~aPE~~~~-------~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----  284 (681)
T 2pzi_A          228 VSRINSF------------GYLYGTPGFQAPEIVRT-------GPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----  284 (681)
T ss_dssp             CEETTCC------------SCCCCCTTTSCTTHHHH-------CSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----
T ss_pred             chhcccC------------CccCCCccccCHHHHcC-------CCCCceehhhhHHHHHHHHhCCCCCcccccccc----
Confidence            8754321            25689999999999863       357899999999999999999999976421110    


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                         .  ....+...++.+.+||.+||.+||.+||+..+++.|+|+.
T Consensus       285 -------------------~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          285 -------------------P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             -------------------C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             -------------------c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                               0  0000112467899999999999999999999999999874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=7e-32  Score=269.63  Aligned_cols=228  Identities=15%  Similarity=0.098  Sum_probs=153.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---HHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      +.+.|++ .+.||+|+||.||+|.+..+++.||||++.......   ...+.+|++++..+ +||||+++++++++....
T Consensus        29 ~~~~y~i-~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~  106 (286)
T 3uqc_A           29 ANGRYRL-LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGG  106 (286)
T ss_dssp             TTTTEEE-EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred             ecCcEEE-EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcE
Confidence            5567876 478999999999999999999999999997543322   35688999999886 699999999999765433


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +   .|                       .+|.-+ +              .+...+.. . ..|+              
T Consensus       107 ~---lv-----------------------~e~~~g-~--------------~L~~~l~~-~-~~~~--------------  129 (286)
T 3uqc_A          107 L---VV-----------------------AEWIRG-G--------------SLQEVADT-S-PSPV--------------  129 (286)
T ss_dssp             E---EE-----------------------EECCCE-E--------------EHHHHHTT-C-CCHH--------------
T ss_pred             E---EE-----------------------EEecCC-C--------------CHHHHHhc-C-CChH--------------
Confidence            2   11                       111000 0              00000000 0 0000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                         ++   -                     .+..|   ++.++.|+|  ++||+||||||+|||+..   .+.+||+++|
T Consensus       130 ---~~---~---------------------~i~~q---l~~aL~~lH--~~givH~Dikp~NIll~~---~g~~kl~~~~  174 (286)
T 3uqc_A          130 ---GA---I---------------------RAMQS---LAAAADAAH--RAGVALSIDHPSRVRVSI---DGDVVLAYPA  174 (286)
T ss_dssp             ---HH---H---------------------HHHHH---HHHHHHHHH--HTTCCCCCCSGGGEEEET---TSCEEECSCC
T ss_pred             ---HH---H---------------------HHHHH---HHHHHHHHH--HCCCccCCCCcccEEEcC---CCCEEEEecc
Confidence               00   0                     02333   667788888  999999999999999954   3557887443


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                                                  |++             .|+.++|||||||++|+|++|.+||.+.+..+....
T Consensus       175 ----------------------------~~~-------------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~  213 (286)
T 3uqc_A          175 ----------------------------TMP-------------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP  213 (286)
T ss_dssp             ----------------------------CCT-------------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE
T ss_pred             ----------------------------ccC-------------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH
Confidence                                        222             256789999999999999999999998654321100


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ..            .+..+....+...+..+++++++||.+||.+||.+| |++|+++.
T Consensus       214 ~~------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          214 AE------------RDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             CC------------BCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HH------------HHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            00            001122222222235689999999999999999999 99999863

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=3.4e-29  Score=273.04  Aligned_cols=230  Identities=14%  Similarity=0.065  Sum_probs=138.5

Q ss_pred             eeceeCceEEEEEEEccCCcEEEEEEeccCCC----------CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPG----------HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~----------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .++.|++|.+..++...+|+.||||++.+...          ...+++.+|+++|.++..|+||++++++++++...+  
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y--  318 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW--  318 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE--
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE--
Confidence            46788899888888889999999999965421          123468899999999988999999999999987766  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.|-                 |.               .|.                             
T Consensus       319 -LV------MEyv~-----------------G~---------------~L~-----------------------------  330 (569)
T 4azs_A          319 -LV------MEKLP-----------------GR---------------LLS-----------------------------  330 (569)
T ss_dssp             -EE------EECCC-----------------SE---------------EHH-----------------------------
T ss_pred             -EE------EecCC-----------------CC---------------cHH-----------------------------
Confidence             33      33321                 10               011                             


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                +++....|+..     ..+++|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+|+
T Consensus       331 ----------d~i~~~~~l~~-----~~I~~Q---Il~AL~ylH--~~GIIHRDIKPeNILL~---~dg~vKL~DFGlAr  387 (569)
T 4azs_A          331 ----------DMLAAGEEIDR-----EKILGS---LLRSLAALE--KQGFWHDDVRPWNVMVD---ARQHARLIDFGSIV  387 (569)
T ss_dssp             ----------HHHHTTCCCCH-----HHHHHH---HHHHHHHHH--HTTCEESCCCGGGEEEC---TTSCEEECCCTTEE
T ss_pred             ----------HHHHhCCCCCH-----HHHHHH---HHHHHHHHH--HCCceeccCchHhEEEC---CCCCEEEeecccCe
Confidence                      11111111100     014455   788899999  99999999999999995   44679999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ....+.|||+.|||||++.+       .+...+|+||+|+++|.|++|..||..            
T Consensus       388 ~~~~~~--------~~~~t~vGTp~YmAPE~l~g-------~~~~~~d~~s~g~~~~~l~~~~~~~~~------------  440 (569)
T 4azs_A          388 TTPQDC--------SWPTNLVQSFFVFVNELFAE-------NKSWNGFWRSAPVHPFNLPQPWSNWLY------------  440 (569)
T ss_dssp             SCC-----------CCSHHHHHHHHHHHHHHC------------------------CCCCTTHHHHHH------------
T ss_pred             eCCCCC--------ccccCceechhhccHHHhCC-------CCCCcccccccccchhhhccccchhHH------------
Confidence            654322        13457899999999999863       366789999999999998777655421            


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                                 .+.    ..+...|     .+.+++..++..+|..|+.......|+|..
T Consensus       441 -----------~l~----~~~~~~~-----~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  480 (569)
T 4azs_A          441 -----------AVW----QEPVERW-----NFVLLLALFEKKAKLPSAEQQRGATEQWII  480 (569)
T ss_dssp             -----------HHH----TSCGGGC-----SHHHHHHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred             -----------Hhh----cCCCCCC-----cHHHHHHHHhCCCCCCCCChhhhccchhHH
Confidence                       111    1111111     246677778888888888877777777753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.83  E-value=2.3e-21  Score=194.33  Aligned_cols=91  Identities=34%  Similarity=0.610  Sum_probs=74.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||||||+   +..+.+||+|||+++.+......      ....+.+||+.|||||++..      ..|
T Consensus       147 ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~~------~~~~~~~GTp~YmAPEvl~~------~~y  211 (311)
T 4aw0_A          147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQ------ARANSFVGTAQYVSPELLTE------KSA  211 (311)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTTC------CCBCCCCSCGGGCCHHHHHH------SCB
T ss_pred             HHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCCc------ccccCcccCcccCCHHHHcC------CCC
Confidence            4578899999999999999   45567999999998654322111      02346789999999999863      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       212 ~~~~DiWSlGvilyeml~G~~PF~~~  237 (311)
T 4aw0_A          212 CKSSDLWALGCIIYQLVAGLPPFRAG  237 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.82  E-value=1.4e-21  Score=211.86  Aligned_cols=99  Identities=16%  Similarity=0.187  Sum_probs=74.0

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  319 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~  319 (539)
                      ++.++.|+|  ++||+||||||+|||+..     .+||+|||+++.......... .......+.+||+.|||||++...
T Consensus       440 i~~aL~~LH--~~gIiHrDiKp~NILl~~-----~~kL~DFGla~~~~~~~~~~~-~~~~~~~~~~GT~~y~APEv~~~~  511 (540)
T 3en9_A          440 IGEIVGKLH--KNDVIHNDLTTSNFIFDK-----DLYIIDFGLGKISNLDEDKAV-DLIVFKKAVLSTHHEKFDEIWERF  511 (540)
T ss_dssp             HHHHHHHHH--HTTEECTTCCTTSEEESS-----SEEECCCTTCEECCCHHHHHH-HHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred             HHHHHHHHH--HCcCccCCCCHHHEEECC-----eEEEEECccCEECCCcccccc-chhhhhhhhcCCCCcCCHHHHHHH
Confidence            777888888  999999999999999953     699999999986532110000 000012367999999999999752


Q ss_pred             CCCCCCCCCcccchhhhhHHHHHHHhCCCCC
Q psy16343        320 MGPEASGYDKRCDLWSLGVVVYILLCGYPPF  350 (539)
Q Consensus       320 ~~~~~~~y~~~~DiWSlGvily~ll~G~~PF  350 (539)
                          ..+|+..+|+||.++-..+...++.++
T Consensus       512 ----~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          512 ----LEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             ----HHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ----HHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                246888999999998888888777665

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.82  E-value=5.8e-21  Score=194.27  Aligned_cols=89  Identities=30%  Similarity=0.581  Sum_probs=73.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+.....        ...+.+||+.|||||++.      ...|
T Consensus       185 ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~~~--------~~~~~~GTp~YmAPEvl~------~~~y  247 (346)
T 4fih_A          185 VLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVP--------RRKSLVGTPYWMAPELIS------RLPY  247 (346)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSC--------CBCCCCSCGGGCCHHHHT------TCCB
T ss_pred             HHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecCCCCC--------cccccccCcCcCCHHHHC------CCCC
Confidence            4578899999999999999   4556799999999865432211        233678999999999985      3579


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       248 ~~~~DiWSlGvilyeml~G~~PF~~~  273 (346)
T 4fih_A          248 GPEVDIWSLGIMVIEMVDGEPPYFNE  273 (346)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999999999764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.81  E-value=9.3e-21  Score=189.74  Aligned_cols=89  Identities=40%  Similarity=0.647  Sum_probs=71.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.......        ...+.+||+.|||||++.      ...|
T Consensus       141 ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~~~--------~~~~~~GT~~YmAPE~~~------~~~y  203 (304)
T 3ubd_A          141 HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEK--------KAYSFCGTVEYMAPEVVN------RRGH  203 (304)
T ss_dssp             HHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC-----C--------CCCSCCCCGGGCCHHHHH------TSCC
T ss_pred             HHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccCCCc--------cccccccCcccCCHHHhc------cCCC
Confidence            4578899999999999999   4556799999999864322211        223568999999999985      3578


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       204 ~~~~DiwSlGvilyemltG~~PF~~~  229 (304)
T 3ubd_A          204 TQSADWWSFGVLMFEMLTGTLPFQGK  229 (304)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCCcccchHHHHHHHHhCCCCCCCc
Confidence            99999999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.81  E-value=1.7e-20  Score=190.20  Aligned_cols=95  Identities=28%  Similarity=0.393  Sum_probs=70.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+..++  ..+||+|||+++.+..........   ...+.+||+.|||||++.      ...|
T Consensus       165 ylH~~~IiHRDlKp~NILl~~~g--~~vKl~DFGla~~~~~~~~~~~~~---~~~~~~GT~~YmAPE~~~------~~~y  233 (336)
T 4g3f_A          165 YLHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLL---TGDYIPGTETHMAPEVVM------GKPC  233 (336)
T ss_dssp             HHHTTTEECSCCCGGGEEECTTS--CCEEECCCTTCEEC---------------CCCCCCGGGCCHHHHT------TCCC
T ss_pred             HHHHCCceecccCHHHEEEeCCC--CEEEEeeCCCCeEccCCCccccee---cCCccccCccccCHHHHC------CCCC
Confidence            45788999999999999995322  369999999986543322111100   112457999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       234 ~~~~DiwSlGvilyemltG~~Pf~~~  259 (336)
T 4g3f_A          234 DAKVDIWSSCCMMLHMLNGCHPWTQY  259 (336)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             CcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            99999999999999999999999864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.80  E-value=2e-20  Score=195.01  Aligned_cols=89  Identities=30%  Similarity=0.581  Sum_probs=73.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+.....        ...+.+||+.|||||++.      ...|
T Consensus       262 ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~~~~~--------~~~~~~GTp~YmAPEvl~------~~~y  324 (423)
T 4fie_A          262 VLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVP--------RRKSLVGTPYWMAPELIS------RLPY  324 (423)
T ss_dssp             HHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECCSSCC--------CBCCCEECTTTCCHHHHT------TCCB
T ss_pred             HHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECCCCCc--------cccccccCcCcCCHHHHC------CCCC
Confidence            4578899999999999999   4556799999999865432211        233678999999999985      3579


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       325 ~~~~DiWSlGvilyeml~G~~PF~~~  350 (423)
T 4fie_A          325 GPEVDIWSLGIMVIEMVDGEPPYFNE  350 (423)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999999999764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.80  E-value=3.8e-20  Score=184.24  Aligned_cols=86  Identities=28%  Similarity=0.488  Sum_probs=69.3

Q ss_pred             ccccCC--eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKR--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~--IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|.++  ||||||||+|||+..  ..+.+||+|||+++.....          ...+.+||+.|||||++.       .
T Consensus       144 ylH~~~~~IiHRDlKp~NILl~~--~~g~vKl~DFGla~~~~~~----------~~~~~~GTp~YmAPE~~~-------~  204 (290)
T 3fpq_A          144 FLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS----------FAKAVIGTPEFMAPEMYE-------E  204 (290)
T ss_dssp             HHHTSSSCCCCCCCCGGGEEESS--TTSCEEECCTTGGGGCCTT----------SBEESCSSCCCCCGGGGG-------T
T ss_pred             HHHHCCCCEEecccChhheeEEC--CCCCEEEEeCcCCEeCCCC----------ccCCcccCccccCHHHcC-------C
Confidence            346666  999999999999953  2457999999998532211          223568999999999874       3


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      .|+.++|||||||++|+|+||++||.+
T Consensus       205 ~y~~~~DiwSlGvilyelltg~~Pf~~  231 (290)
T 3fpq_A          205 KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            589999999999999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.80  E-value=7.7e-21  Score=193.66  Aligned_cols=89  Identities=29%  Similarity=0.564  Sum_probs=72.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.......        ...+.+||+.|||||++.      ...|
T Consensus       140 ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~~~~--------~~~~~~GT~~YmAPE~l~------~~~y  202 (350)
T 4b9d_A          140 HVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNSTVE--------LARACIGTPYYLSPEICE------NKPY  202 (350)
T ss_dssp             HHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCHHHH--------HHHHHHSCCTTCCHHHHT------TCCC
T ss_pred             HHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecCCcc--------cccccCCCccccCHHHHC------CCCC
Confidence            4577899999999999999   4556799999999865332110        112457999999999985      3579


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       203 ~~~~DiwSlGvilyemltG~~PF~~~  228 (350)
T 4b9d_A          203 NNKSDIWALGCVLYELCTLKHAFEAG  228 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.79  E-value=4e-20  Score=182.56  Aligned_cols=88  Identities=38%  Similarity=0.676  Sum_probs=63.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC-
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG-  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~-  199 (539)
                      +.|.++||||||||+||++   +..+.+||+|||+++......         ...+.+||+.|||||++..      .. 
T Consensus       127 ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~~---------~~~~~~GT~~Y~APE~~~~------~~y  188 (275)
T 3hyh_A          127 YCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGN---------FLKTSCGSPNYAAPEVISG------KLY  188 (275)
T ss_dssp             HHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC------------------------CTTSCHHHHSS------SSC
T ss_pred             HHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCCCC---------ccCCeeECcccCChhhhcC------CCC
Confidence            4577899999999999999   455679999999985432211         2235689999999999853      33 


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++||||+||++|+|++|+.||.+.
T Consensus       189 ~~~~~DiwSlGvily~lltg~~PF~~~  215 (275)
T 3hyh_A          189 AGPEVDVWSCGVILYVMLCRRLPFDDE  215 (275)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCChhhhHHHHHHHHHHHHCCCCCCCC
Confidence            467999999999999999999999764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.78  E-value=5.9e-20  Score=184.25  Aligned_cols=93  Identities=30%  Similarity=0.471  Sum_probs=69.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||++   ..+.+||+|||+++........      ....+.+||+.|||||++...   ....|
T Consensus       147 yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~~~~------~~~~~~~GT~~ymAPE~l~~~---~~~~y  214 (307)
T 3omv_A          147 YLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWSGS------QQVEQPTGSVLWMAPEVIRMQ---DNNPF  214 (307)
T ss_dssp             HHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSCBC------------------CCCCTTSCCHHHHHCC---SSCCC
T ss_pred             HHHHCCccCCccCHHHEEEC---CCCcEEEeeccCceecccCCcc------eeecccccCCCccCHHHhhcc---CCCCC
Confidence            44778999999999999994   4567999999998643221111      022356899999999998531   12458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|||+||+.||.+
T Consensus       215 ~~ksDVwS~Gvvl~Elltg~~Pf~~  239 (307)
T 3omv_A          215 SFQSDVYSYGIVLYELMTGELPYSH  239 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcHHHhHhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999999976

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.78  E-value=9.1e-20  Score=198.94  Aligned_cols=88  Identities=34%  Similarity=0.606  Sum_probs=73.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||||||+   +..+++||+|||+++.....          ...+.+||+.|||||++..     ...|
T Consensus       307 yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~~~~----------~~~t~~GTp~YmAPEvl~~-----~~~y  368 (689)
T 3v5w_A          307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK----------KPHASVGTHGYMAPEVLQK-----GVAY  368 (689)
T ss_dssp             HHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC----------CCCSCCSCGGGCCHHHHST-----TCCC
T ss_pred             HHHHCCccccCCchHHeEE---eCCCCEEecccceeeecCCC----------CCCCccCCcCccCHHHHhC-----CCCC
Confidence            4578899999999999999   55678999999998643321          2336789999999999842     3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       369 ~~~vDiWSLGvilYEmLtG~~PF~~~  394 (689)
T 3v5w_A          369 DSSADWFSLGCMLFKLLRGHSPFRQH  394 (689)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.75  E-value=3.8e-19  Score=185.06  Aligned_cols=94  Identities=28%  Similarity=0.491  Sum_probs=72.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+.......    .....+.+||+.|||||++..     ...|
T Consensus       173 ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGla~~~~~~~~~~----~~~~~~~~GT~~Y~APEv~~~-----~~~~  240 (398)
T 4b99_A          173 YMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEH----QYFMTEYVATRWYRAPELMLS-----LHEY  240 (398)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTCBCC-----------CCCCCSSCCCCTTCCHHHHTT-----CSCC
T ss_pred             HHHHCcCcCCCcCcccccc---CCCCCEEEeecceeeecccCcccc----ccccccceeChHhcCHHHhcC-----CCCC
Confidence            4578899999999999999   456679999999986543221111    012346789999999998753     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       241 ~~~~DiWSlG~il~ell~G~~pF~g~  266 (398)
T 4b99_A          241 TQAIDLWSVGCIFGEMLARRQLFPGK  266 (398)
T ss_dssp             CTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred             CChhheehhHHHHHHHHHCCCCCCCC
Confidence            89999999999999999999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.75  E-value=4.8e-19  Score=182.16  Aligned_cols=115  Identities=28%  Similarity=0.456  Sum_probs=80.9

Q ss_pred             CCCeeeeeeeeccccc------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCc
Q psy16343        105 HPNIIQLLEYYEDDEN------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  160 (539)
Q Consensus       105 HpnIv~l~~~~~~~~~------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~  160 (539)
                      ..++.-+++|++.++.                        +.|.++||||||||||||+...  .+.+||+|||+++...
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~--~~~~kl~DFGla~~~~  169 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRR--LKKYALVDFGLAQGTH  169 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECT
T ss_pred             CCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCC--CCeEEECcCCCCcccC
Confidence            4566666788765532                        4578899999999999999532  3579999999986433


Q ss_pred             CCCCCCC--------------------CCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCC
Q psy16343        161 FNTSVHS--------------------PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY  220 (539)
Q Consensus       161 ~~~~~~~--------------------~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~  220 (539)
                      .......                    ......+.+.+||+.|+|||++..     ...|+.++|+||+||++|+|++|+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~y~~~~DiWSlG~il~ell~G~  244 (361)
T 4f9c_A          170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-----CPNQTTAIDMWSAGVIFLSLLSGR  244 (361)
T ss_dssp             TCSCGGGGGC--------------------------CCCCGGGCCHHHHTT-----CSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             CccccccccccccccccccccccccccccccccccccccCccccCHHHHcC-----CCCCCCccchhhhHHHHHHHHHCC
Confidence            2111000                    000112345689999999998853     245889999999999999999999


Q ss_pred             CCCCCC
Q psy16343        221 PPFYGN  226 (539)
Q Consensus       221 ~Pf~~~  226 (539)
                      .||...
T Consensus       245 ~Pf~~~  250 (361)
T 4f9c_A          245 YPFYKA  250 (361)
T ss_dssp             SSSSCC
T ss_pred             CCCCCC
Confidence            999754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.72  E-value=9.9e-19  Score=175.76  Aligned_cols=91  Identities=26%  Similarity=0.450  Sum_probs=72.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +....+||+|||+++.+.......      ...+.+||+.|||||++..      ..|
T Consensus       160 yLH~~~iiHRDLK~~NILl---~~~~~~Ki~DFGlar~~~~~~~~~------~~~~~~gt~~ymAPE~l~~------~~~  224 (308)
T 4gt4_A          160 YLSSHHVVHKDLATRNVLV---YDKLNVKISDLGLFREVYAADYYK------LLGNSLLPIRWMAPEAIMY------GKF  224 (308)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CGGGCEEECCSCCBCGGGGGGCBC------SSSSSCBCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCCCCCCccccceEE---CCCCCEEECCcccceeccCCCcee------EecccccCCcccCHHHHhC------CCC
Confidence            3477899999999999999   455679999999986543222111      1224579999999998853      569


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |..||.+.
T Consensus       225 s~ksDVwSfGvvl~El~t~g~~Pf~~~  251 (308)
T 4gt4_A          225 SIDSDIWSYGVVLWEVFSYGLQPYCGY  251 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred             CccchhhhHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999998 89999763

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.72  E-value=4.7e-19  Score=177.35  Aligned_cols=91  Identities=25%  Similarity=0.420  Sum_probs=71.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +....+||+|||+++.........      ......||+.|||||++..      ..|
T Consensus       143 yLH~~~iiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~------~~~~~~gt~~ymAPE~~~~------~~~  207 (299)
T 4asz_A          143 YLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDYYR------VGGHTMLPIRWMPPESIMY------RKF  207 (299)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCEE------ETTTEEECGGGCCHHHHHH------CCC
T ss_pred             HHHhCCcccCccCHhhEEE---CCCCcEEECCcccceecCCCCcee------ecCceecChhhcCHHHHcC------CCC
Confidence            4577899999999999999   455679999999986432221110      1113468999999999863      569


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |+.||.+.
T Consensus       208 ~~k~DVwS~Gvvl~Ellt~G~~Pf~~~  234 (299)
T 4asz_A          208 TTESDVWSLGVVLWEIFTYGKQPWYQL  234 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            999999999999999998 89999763

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.72  E-value=1.2e-18  Score=176.91  Aligned_cols=91  Identities=26%  Similarity=0.396  Sum_probs=66.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +....+||+|||+++.+.......      .....+||+.|||||++.      ...|
T Consensus       173 yLH~~~iiHRDLKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~------~~~~~~gt~~ymAPE~~~------~~~~  237 (329)
T 4aoj_A          173 YLAGLHFVHRDLATRNCLV---GQGLVVKIGDFGMSRDIYSTDYYR------VGGRTMLPIRWMPPESIL------YRKF  237 (329)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC----------------------CCCCGGGCCHHHHT------TCCC
T ss_pred             HHhcCCeecccccHhhEEE---CCCCcEEEcccccceeccCCCcce------ecCcccccccccChhhhc------CCCC
Confidence            4477899999999999999   455679999999986543221111      112357899999999885      3568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |+.||.+.
T Consensus       238 ~~~sDvwS~Gvvl~Ellt~G~~Pf~~~  264 (329)
T 4aoj_A          238 TTESDVWSFGVVLWEIFTYGKQPWYQL  264 (329)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred             CccccccchHHHHHHHHcCCCCCCCCC
Confidence            999999999999999999 89999763

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.71  E-value=8.4e-19  Score=179.48  Aligned_cols=91  Identities=30%  Similarity=0.506  Sum_probs=71.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+.......      ...+.+||+.|||||++..      ..|
T Consensus       200 yLH~~~iiHRDLK~~NILl---~~~~~vKi~DFGlar~~~~~~~~~------~~~~~~gt~~ymAPE~l~~------~~y  264 (353)
T 4ase_A          200 FLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYV------RKGDARLPLKWMAPETIFD------RVY  264 (353)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTTCTTSE------EETTEEECGGGCCHHHHHH------CCC
T ss_pred             hHhhCCeecCccCccceee---CCCCCEEECcchhhhhcccCCCce------eeccccccccccCHHHHhc------CCC
Confidence            3477899999999999999   455679999999986543221110      1123568999999999863      569


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |..||.+.
T Consensus       265 ~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          265 TIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            999999999999999998 99999763

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.71  E-value=1.3e-18  Score=174.66  Aligned_cols=96  Identities=25%  Similarity=0.304  Sum_probs=66.9

Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..+||||||||+|||+   +..+.+||+|||+++...........    ...+.+||+.|||||++..........++.+
T Consensus       126 ~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~~~~~~~----~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k  198 (303)
T 3hmm_A          126 KPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEVLDDSINMKHFESFKR  198 (303)
T ss_dssp             BCCEECSCCCGGGEEE---CTTSCEEECCCTTCEEEETTTTEESC----C-----CCGGGCCHHHHTTCSCTTCHHHHHH
T ss_pred             CCCEeeccCCcccEEE---CCCCCEEEEeCCCCccccCCCCceee----ecccccccccccCHHHhcccccccCCccChh
Confidence            4489999999999999   55678999999998644322211100    1124579999999998853111111236779


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +|||||||++|||+||.+||...
T Consensus       199 ~DVwS~Gvvl~El~tg~~~~~~~  221 (303)
T 3hmm_A          199 ADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             HHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             HhhhhHHHHHHHHHHCCCCCCcc
Confidence            99999999999999999988653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.71  E-value=2.4e-18  Score=172.33  Aligned_cols=93  Identities=32%  Similarity=0.551  Sum_probs=62.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCC----CCCCccCCCCCCCcccccccccccCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL----ATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~----~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +.|.++||||||||+|||+.   ..+.+||+|||+++.+..........    ......+.+||+.|||||++.      
T Consensus       133 ylH~~~IiHRDlKp~NILl~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~------  203 (299)
T 4g31_A          133 FLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH------  203 (299)
T ss_dssp             HHHHTTCCCCCCCGGGEEEC---TTCCEEECCCCCC--------------------------CCCTTSCHHHHT------
T ss_pred             HHHHCcCccccCcHHHeEEC---CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHc------
Confidence            56778999999999999994   45679999999986544322111000    000123468999999999985      


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ...|+.++||||+||++|+|++   ||.+
T Consensus       204 ~~~y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          204 GNSYSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             CCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence            3579999999999999999996   7754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.70  E-value=5.4e-18  Score=168.51  Aligned_cols=51  Identities=25%  Similarity=0.238  Sum_probs=43.1

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN  317 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~  317 (539)
                      ++.++.|+|  ++||+||||||+|||+.    .+.+||+|||+|+                     .+..|+|||++.
T Consensus       202 i~~~l~~lH--~~giiHrDlkp~NILl~----~~~vkl~DFG~a~---------------------~~~~~~a~e~l~  252 (282)
T 1zar_A          202 ILEEVAKFY--HRGIVHGDLSQYNVLVS----EEGIWIIDFPQSV---------------------EVGEEGWREILE  252 (282)
T ss_dssp             HHHHHHHHH--HTTEECSCCSTTSEEEE----TTEEEECCCTTCE---------------------ETTSTTHHHHHH
T ss_pred             HHHHHHHHH--HCCCEeCCCCHHHEEEE----CCcEEEEECCCCe---------------------ECCCCCHHHHHH
Confidence            667788888  99999999999999996    4569999999875                     345689999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.66  E-value=2.6e-17  Score=179.38  Aligned_cols=90  Identities=38%  Similarity=0.647  Sum_probs=73.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+|||+... ..+.+||+|||+++.+....         ...+.+||+.|||||++.      ...|
T Consensus       270 ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~~~~---------~~~~~~GT~~y~APEv~~------~~~y  333 (573)
T 3uto_A          270 HMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQ---------SVKVTTGTAEFAAPEVAE------GKPV  333 (573)
T ss_dssp             HHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEECCTTS---------EEEEECSSGGGCCHHHHT------TCCB
T ss_pred             HHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeEccCCC---------ceeeeEECccccCHHHhC------CCCC
Confidence            4577899999999999999543 23679999999986543221         233568999999999985      3578


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       334 ~~~~DiWSlGvilyeml~G~~Pf~~~  359 (573)
T 3uto_A          334 GYYTDMWSVGVLSYILLSGLSPFGGE  359 (573)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            99999999999999999999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.59  E-value=6.3e-16  Score=160.92  Aligned_cols=89  Identities=29%  Similarity=0.474  Sum_probs=71.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++..      ..+
T Consensus       168 ~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~--------~~~~~~gt~~Y~aPE~l~~------~~~  230 (396)
T 4dc2_A          168 YLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD--------TTSTFCGTPNYIAPEILRG------EDY  230 (396)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC--------CBCCCCBCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccCCC--------ccccccCCcccCCchhhcC------CCC
Confidence            3477899999999999999   4556799999999853221111        2335689999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       231 ~~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          231 GFSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            89999999999999999999999754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.59  E-value=3e-16  Score=160.93  Aligned_cols=89  Identities=35%  Similarity=0.584  Sum_probs=68.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++..      ..+
T Consensus       139 ~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  201 (353)
T 3txo_A          139 FLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGV--------TTATFCGTPDYIAPEILQE------MLY  201 (353)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC-----------------CCGGGCCHHHHHH------HHC
T ss_pred             HHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCCc--------cccccCCCcCeEChhhcCC------CCc
Confidence            4467799999999999999   4556799999999853221111        2235689999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       202 ~~~~DiwslG~il~ell~G~~Pf~~~  227 (353)
T 3txo_A          202 GPAVDWWAMGVLLYEMLCGHAPFEAE  227 (353)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCccCCCcchHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.58  E-value=8.2e-16  Score=156.72  Aligned_cols=89  Identities=33%  Similarity=0.649  Sum_probs=71.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++.      ...+
T Consensus       120 ~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~------~~~~  182 (337)
T 1o6l_A          120 YLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA--------TMKTFCGTPEYLAPEVLE------DNDY  182 (337)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC--------CBCCCEECGGGCCGGGGS------SSCB
T ss_pred             HHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCCC--------cccccccChhhCChhhhc------CCCC
Confidence            4466799999999999999   4556799999999854221111        223567999999999885      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       183 ~~~~DiwslG~il~ell~g~~Pf~~~  208 (337)
T 1o6l_A          183 GRAVDWWGLGVVMYEMMCGRLPFYNQ  208 (337)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhcccchhHHHHHhcCCCCCCCC
Confidence            89999999999999999999999763

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.58  E-value=8.2e-16  Score=157.71  Aligned_cols=89  Identities=33%  Similarity=0.603  Sum_probs=71.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        ...+.+||+.|+|||++.      ...+
T Consensus       136 ~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~------~~~~  198 (353)
T 2i0e_A          136 FLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV--------TTKTFCGTPDYIAPEIIA------YQPY  198 (353)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC--------CBCCCCSCGGGCCHHHHT------TCCB
T ss_pred             HHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccCCc--------ccccccCCccccChhhhc------CCCc
Confidence            4567799999999999999   4556799999999854221111        223568999999999885      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       199 ~~~~DiwslG~il~ell~G~~Pf~~~  224 (353)
T 2i0e_A          199 GKSVDWWAFGVLLYEMLAGQAPFEGE  224 (353)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCcccccchHHHHHHHHcCCCCCCCC
Confidence            89999999999999999999999764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.58  E-value=5.7e-16  Score=159.34  Aligned_cols=93  Identities=18%  Similarity=0.297  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccC--------CCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccc
Q psy16343        121 HERHKRIAHRDLKPENILCVH--------PDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF  192 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~--------~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~  192 (539)
                      +.|..+||||||||+||++..        .+..+.+||+|||++..+......      ......+||+.|+|||++.. 
T Consensus       187 ~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-  259 (365)
T 3e7e_A          187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG------TIFTAKCETSGFQCVEMLSN-  259 (365)
T ss_dssp             HHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTT------EEECCSSCTTSCCCHHHHTT-
T ss_pred             HHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCC------ceeeeecCCCCCCChHHhcC-
Confidence            347779999999999999965        222678999999998543211110      02234679999999998853 


Q ss_pred             cCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       193 ~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                           ..++.++|||||||++|+|++|+.||..
T Consensus       260 -----~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          260 -----KPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             -----CCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             -----CCCCccccHHHHHHHHHHHHhCCCcccc
Confidence                 4588999999999999999999999853

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.58  E-value=1.5e-15  Score=168.66  Aligned_cols=89  Identities=33%  Similarity=0.603  Sum_probs=72.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+|||+   +..+.+||+|||+++.......        ...+.+||+.|+|||++.      ...|
T Consensus       457 ~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~~~--------~~~~~~GT~~Y~APE~l~------~~~~  519 (674)
T 3pfq_A          457 FLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGV--------TTKTFCGTPDYIAPEIIA------YQPY  519 (674)
T ss_dssp             HHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCTTC--------CBCCCCSCSSSCCHHHHT------CCCB
T ss_pred             HHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccCCc--------ccccccCCCcccCHhhhc------CCCC
Confidence            4577899999999999999   4556799999999854222111        223568999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|.+||.+.
T Consensus       520 ~~~~DvwSlGvilyelltG~~Pf~~~  545 (674)
T 3pfq_A          520 GKSVDWWAFGVLLYEMLAGQAPFEGE  545 (674)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CccceEechHHHHHHHHcCCCCCCCC
Confidence            99999999999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.58  E-value=5.7e-16  Score=163.34  Aligned_cols=95  Identities=36%  Similarity=0.685  Sum_probs=72.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+||++   +..+.+||+|||+++........       .....+||+.|+|||++..... ....+
T Consensus       190 ~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~~~~~-------~~~~~~GT~~Y~APE~l~~~~~-~~~~~  258 (437)
T 4aw2_A          190 SVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTV-------QSSVAVGTPDYISPEILQAMEG-GKGRY  258 (437)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTSCE-------ECCSCCSCGGGCCHHHHHHHHT-SCCEE
T ss_pred             HHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhcccCCCc-------ccccccCCcCeeChHHHhhccc-CCCCC
Confidence            3467799999999999999   45567999999998543322111       1124579999999998852111 12457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       259 ~~~~DvwSlGvil~elltG~~Pf~~~  284 (437)
T 4aw2_A          259 GPECDWWSLGVCMYEMLYGETPFYAE  284 (437)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.57  E-value=1.1e-15  Score=156.39  Aligned_cols=89  Identities=35%  Similarity=0.601  Sum_probs=71.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++..      ..+
T Consensus       133 ~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  195 (345)
T 1xjd_A          133 FLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA--------KTNTFCGTPDYIAPEILLG------QKY  195 (345)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC--------CBCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccCCC--------cccCCCCCcccCChhhhcC------CCC
Confidence            3467799999999999999   4556799999999854221111        2235689999999998853      468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       196 ~~~~DiwslG~il~ell~g~~Pf~~~  221 (345)
T 1xjd_A          196 NHSVDWWSFGVLLYEMLIGQSPFHGQ  221 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CChhhhHHHHHHHHHHhcCCCCCCCC
Confidence            89999999999999999999999764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.57  E-value=5.8e-16  Score=162.00  Aligned_cols=94  Identities=33%  Similarity=0.631  Sum_probs=71.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.........       ...+.+||+.|+|||++....  ....+
T Consensus       183 ~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~~~~-------~~~~~~gt~~Y~APE~l~~~~--~~~~~  250 (410)
T 3v8s_A          183 AIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMV-------RCDTAVGTPDYISPEVLKSQG--GDGYY  250 (410)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTSEE-------ECCSCCSCGGGCCHHHHHTTT--TTCEE
T ss_pred             HHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccCCcc-------cccCCcCCccccCHHHhhccC--CCcCC
Confidence            4577899999999999999   55667999999998543322110       122568999999999886311  11127


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       251 ~~~~DiwSlGvilyell~G~~Pf~~~  276 (410)
T 3v8s_A          251 GRECDWWSVGVFLYEMLVGDTPFYAD  276 (410)
T ss_dssp             ETHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CCcceEecchHHHHHHHhCCCCCCCC
Confidence            78999999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.57  E-value=1.1e-15  Score=157.88  Aligned_cols=89  Identities=40%  Similarity=0.671  Sum_probs=71.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++.      ...+
T Consensus       154 ~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~------~~~~  216 (373)
T 2r5t_A          154 YLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNS--------TTSTFCGTPEYLAPEVLH------KQPY  216 (373)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBCCCC--------CCCSBSCCCCCCCHHHHT------TCCC
T ss_pred             HHHHCCceecCCCHHHEEE---CCCCCEEEeeCccccccccCCC--------ccccccCCccccCHHHhC------CCCC
Confidence            3477899999999999999   4556799999999854221111        223568999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       217 ~~~~DiwslG~il~ell~G~~Pf~~~  242 (373)
T 2r5t_A          217 DRTVDWWCLGAVLYEMLYGLPPFYSR  242 (373)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCC
Confidence            89999999999999999999999764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.57  E-value=1.3e-15  Score=158.92  Aligned_cols=91  Identities=46%  Similarity=0.867  Sum_probs=68.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.+||+|||+++......         ...+.+||+.|+|||++.      ...+
T Consensus       176 ~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~------~~~~  240 (400)
T 1nxk_A          176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---------SLTTPCYTPYYVAPEVLG------PEKY  240 (400)
T ss_dssp             HHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------------CTTCCGGGSC------CCCS
T ss_pred             HHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC---------ccccCCCCCCccCHhhcC------CCCC
Confidence            3467799999999999999765557889999999985432211         223567899999999874      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       241 ~~~~DiwslG~il~ell~g~~pf~~~  266 (400)
T 1nxk_A          241 DKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_dssp             SSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.57  E-value=2e-15  Score=156.58  Aligned_cols=91  Identities=37%  Similarity=0.650  Sum_probs=72.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++..+....         ...+.+||+.|+|||++...   ....+
T Consensus       130 ~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~---------~~~~~~gt~~Y~aPE~~~~~---~~~~~  194 (384)
T 4fr4_A          130 YLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRET---------QITTMAGTKPYMAPEMFSSR---KGAGY  194 (384)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCGGGTCCC---SSCCB
T ss_pred             HHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCCC---------ceeccCCCccccCCeeeccC---CCCCC
Confidence            4566799999999999999   455679999999985433221         22356899999999988531   13458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       195 ~~~~DiwSlG~il~elltG~~Pf~~~  220 (384)
T 4fr4_A          195 SFAVDWWSLGVTAYELLRGRRPYHIR  220 (384)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             CccceeechHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.57  E-value=1.6e-15  Score=160.31  Aligned_cols=92  Identities=37%  Similarity=0.727  Sum_probs=74.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++......+.+||+|||++........        .....+||+.|+|||++.      ...+
T Consensus       125 ~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~--------~~~~~~gt~~Y~APE~l~------~~~~  190 (444)
T 3soa_A          125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--------AWFGFAGTPGYLSPEVLR------KDPY  190 (444)
T ss_dssp             HHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC--------BCCCSCSCGGGCCHHHHT------TCCB
T ss_pred             HHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc--------eeecccCCcccCCHHHhc------CCCC
Confidence            45677999999999999997665667899999999854332211        223567999999999885      2468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       191 ~~~~DIwSlGvilyell~G~~Pf~~~  216 (444)
T 3soa_A          191 GKPVDLWACGVILYILLVGYPPFWDE  216 (444)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCccccHHHHHHHHHHHhCCCCCCCc
Confidence            89999999999999999999999764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.57  E-value=1.4e-15  Score=157.86  Aligned_cols=98  Identities=35%  Similarity=0.555  Sum_probs=70.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCC-------------CCCCCCccCCCCCCCccccc
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-------------PLATPLLLTPVGSAEFMAPE  187 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~-------------~~~~~~l~~~~gt~~y~aPE  187 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++..........             ..........+||+.|+|||
T Consensus       124 ~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  200 (388)
T 3oz6_A          124 YLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPE  200 (388)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHH
T ss_pred             HHHhCCEEeCCCCHHHeEE---cCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHH
Confidence            4566799999999999999   4556799999999864432111000             00011233568999999999


Q ss_pred             ccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       188 ~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++..     ...++.++||||+||++|+|++|.+||.+.
T Consensus       201 ~~~~-----~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          201 ILLG-----STKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             HHTT-----CCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             HhcC-----CCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            8752     246889999999999999999999999874

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.56  E-value=8.6e-16  Score=160.78  Aligned_cols=96  Identities=35%  Similarity=0.738  Sum_probs=72.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccC-CCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG-PEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~-~~~~~  199 (539)
                      +.|..+||||||||+||++   +..+++||+|||++.........       .....+||+.|+|||++..... .....
T Consensus       177 ~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~~~~~-------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~  246 (412)
T 2vd5_A          177 SVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTV-------RSLVAVGTPDYLSPEILQAVGGGPGTGS  246 (412)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTTSCE-------ECSSCCSCGGGCCHHHHHHHHTCTTCSE
T ss_pred             HHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccCCCcc-------ccceeccccCcCCHHHHhhcccCcCCCC
Confidence            3477899999999999999   55668999999998544322111       1124579999999998853110 01245


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++||||+||++|+|++|..||.+.
T Consensus       247 ~~~~~DiwSlGvilyelltG~~Pf~~~  273 (412)
T 2vd5_A          247 YGPECDWWALGVFAYEMFYGQTPFYAD  273 (412)
T ss_dssp             ECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence            789999999999999999999999864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.56  E-value=2e-15  Score=155.29  Aligned_cols=91  Identities=36%  Similarity=0.710  Sum_probs=73.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       143 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  207 (362)
T 2bdw_A          143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKK------DPY  207 (362)
T ss_dssp             HHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC---------SCCCSCSCTTTCCHHHHTT------CCC
T ss_pred             HHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc---------ccccCCCCccccCHHHHcc------CCC
Confidence            4467799999999999999776666779999999985433211         1224579999999998852      468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       208 ~~~~DiwslG~il~~ll~g~~Pf~~~  233 (362)
T 2bdw_A          208 SKPVDIWACGVILYILLVGYPPFWDE  233 (362)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            89999999999999999999999763

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.56  E-value=1.9e-15  Score=152.64  Aligned_cols=86  Identities=40%  Similarity=0.758  Sum_probs=70.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.....           ...+.+||+.|+|||++.      ...+
T Consensus       121 ~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~-----------~~~~~~gt~~y~aPE~~~------~~~~  180 (318)
T 1fot_A          121 YLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD-----------VTYTLCGTPDYIAPEVVS------TKPY  180 (318)
T ss_dssp             HHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS-----------CBCCCCSCTTTCCHHHHT------TCCB
T ss_pred             HHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCC-----------ccccccCCccccCHhHhc------CCCC
Confidence            4466799999999999999   4556799999999854321           123467999999999885      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       181 ~~~~DiwslG~il~ell~g~~pf~~~  206 (318)
T 1fot_A          181 NKSIDWWSFGILIYEMLAGYTPFYDS  206 (318)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CcccchhhhHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999763

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.55  E-value=1.7e-15  Score=154.76  Aligned_cols=89  Identities=29%  Similarity=0.474  Sum_probs=70.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++..      ..+
T Consensus       125 ~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  187 (345)
T 3a8x_A          125 YLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD--------TTSTFCGTPNYIAPEILRG------EDY  187 (345)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTTC--------CBCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCCC--------cccccCCCccccCccccCC------CCC
Confidence            4466799999999999999   4556799999999853221111        2235689999999998853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||...
T Consensus       188 ~~~~DiwslG~il~ell~g~~pf~~~  213 (345)
T 3a8x_A          188 GFSVDWWALGVLMFEMMAGRSPFDIV  213 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTT
T ss_pred             ChHHhHHHHHHHHHHHHhCCCCcCCc
Confidence            89999999999999999999999753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.55  E-value=2e-15  Score=160.61  Aligned_cols=88  Identities=30%  Similarity=0.488  Sum_probs=67.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++......         .....+||+.|+|||++..      ..|
T Consensus       179 ~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  240 (464)
T 3ttj_A          179 HLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGY  240 (464)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCCC-----CC---------CC----CCCTTCCHHHHTT------CCC
T ss_pred             HHHHCCcccCCCChHhEEE---eCCCCEEEEEEEeeeecCCCc---------ccCCCcccccccCHHHHcC------CCC
Confidence            4577899999999999999   445679999999985432211         1234679999999999853      468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       241 ~~~~DiwSlG~il~ell~g~~pF~g~  266 (464)
T 3ttj_A          241 KENVDIWSVGCIMGEMVRHKILFPGR  266 (464)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.54  E-value=2.7e-15  Score=153.68  Aligned_cols=91  Identities=37%  Similarity=0.673  Sum_probs=73.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++...+....+||+|||++........        .....+||+.|+|||++..      ..+
T Consensus       145 ~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  210 (351)
T 3c0i_A          145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--------VAGGRVGTPHFMAPEVVKR------EPY  210 (351)
T ss_dssp             HHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC--------BCCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe--------eecCCcCCcCccCHHHHcC------CCC
Confidence            45677999999999999997766667799999999854332111        1224579999999999853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||.+
T Consensus       211 ~~~~DiwslG~il~~ll~g~~pf~~  235 (351)
T 3c0i_A          211 GKPVDVWGCGVILFILLSGCLPFYG  235 (351)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             CchHhhHHHHHHHHHHHHCCCCCCC
Confidence            8999999999999999999999976

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.54  E-value=3.1e-15  Score=157.07  Aligned_cols=90  Identities=33%  Similarity=0.520  Sum_probs=70.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...  ...+||+|||+++......         .....+||+.|+|||++..     ...+
T Consensus       171 ~LH~~~ivHrDlkp~NILl~~~--~~~~kl~DFG~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~  234 (420)
T 1j1b_A          171 YIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGE---------PNVSYICSRYYRAPELIFG-----ATDY  234 (420)
T ss_dssp             HHHTTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECCTTC---------CCCSCCSCTTSCCHHHHTT-----CSSC
T ss_pred             HHHHCCccccCCChhhEEEeCC--CCeEEeccchhhhhcccCC---------CceeeeeCCCcCCHHHHcC-----CCCC
Confidence            4577899999999999999532  3458999999986432221         1224578999999998742     2358


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       235 ~~~~DiwSlG~il~ell~G~~pf~~~  260 (420)
T 1j1b_A          235 TSSIDVWSAGCVLAELLLGQPIFPGD  260 (420)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.53  E-value=2.4e-15  Score=154.00  Aligned_cols=86  Identities=40%  Similarity=0.736  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.....           ...+.+||+.|+|||++..      ..+
T Consensus       156 ~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~  215 (350)
T 1rdq_E          156 YLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG-----------RTWTLCGTPEALAPEIILS------KGY  215 (350)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS-----------CBCCCEECGGGCCHHHHTT------CCB
T ss_pred             HHHHCCcccccCccceEEE---CCCCCEEEcccccceeccC-----------CcccccCCccccCHHHhcC------CCC
Confidence            4477899999999999999   4556799999999854321           1224579999999998853      468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       216 ~~~~DiwslG~il~ell~g~~Pf~~~  241 (350)
T 1rdq_E          216 NKAVDWWALGVLIYEMAAGYPPFFAD  241 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCcCCEecccHhHhHHhhCCCCCCCC
Confidence            89999999999999999999999764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.53  E-value=3.2e-15  Score=161.43  Aligned_cols=89  Identities=34%  Similarity=0.569  Sum_probs=71.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++..+.....        .....+||+.|+|||++..      ..+
T Consensus       304 ~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~~~~~~~~--------~~~~~~GT~~Y~APE~l~~------~~~  366 (543)
T 3c4z_A          304 HLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQT--------KTKGYAGTPGFMAPELLLG------EEY  366 (543)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCTTCC--------CBCCCCSCTTTSCHHHHTT------CCB
T ss_pred             HHHHcCCcccCCChHHEEE---eCCCCEEEeecceeeeccCCCc--------ccccccCCccccChhhhcC------CCC
Confidence            3466799999999999999   4556799999999854332211        1124579999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       367 ~~~~DiwSlGvilyelltG~~PF~~~  392 (543)
T 3c4z_A          367 DFSVDYFALGVTLYEMIAARGPFRAR  392 (543)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred             ChHHhcCcchHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.53  E-value=2.7e-15  Score=152.22  Aligned_cols=88  Identities=38%  Similarity=0.660  Sum_probs=70.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       129 ~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  190 (328)
T 3fe3_A          129 YCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGG---------KLDAFCGAPPYAAPELFQG------KKY  190 (328)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSSSC---------GGGTTSSSGGGCCHHHHHT------CCC
T ss_pred             HHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCCCC---------ccccccCCcceeCcccccC------CCc
Confidence            4566799999999999999   455679999999985433221         2235679999999998853      233


Q ss_pred             -CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 -DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 -~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                       +.++||||+||++|+|++|..||.+.
T Consensus       191 ~~~~~DiwslG~il~ell~g~~pf~~~  217 (328)
T 3fe3_A          191 DGPEVDVWSLGVILYTLVSGSLPFDGQ  217 (328)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence             47899999999999999999999764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.53  E-value=5.3e-15  Score=148.75  Aligned_cols=90  Identities=31%  Similarity=0.553  Sum_probs=69.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....+||+.|+|||++..     ...+
T Consensus       134 ~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  197 (311)
T 3niz_A          134 HCHQHRILHRDLKPQNLLIN---SDGALKLADFGLARAFGIPVR--------SYTHEVVTLWYRAPDVLMG-----SKKY  197 (311)
T ss_dssp             HHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEETTSCCC-----------CCCCCCTTCCHHHHTT-----CCSC
T ss_pred             HHHHCCcccCCCchHhEEEC---CCCCEEEccCcCceecCCCcc--------cccCCcccCCcCCHHHhcC-----CCCC
Confidence            34667999999999999994   456799999999854322111        1224578999999998742     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       198 ~~~~DiwslG~il~~ll~g~~pf~~~  223 (311)
T 3niz_A          198 STSVDIWSIGCIFAEMITGKPLFPGV  223 (311)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CchHHhHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.53  E-value=3.9e-15  Score=148.69  Aligned_cols=89  Identities=35%  Similarity=0.600  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....+||+.|+|||++..      ..+
T Consensus       131 ~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  193 (297)
T 3fxz_A          131 FLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQS--------KRSTMVGTPYWMAPEVVTR------KAY  193 (297)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSTTC--------CBCCCCSCGGGCCHHHHHC------SCB
T ss_pred             HHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCceecCCccc--------ccCCccCCcCccChhhhcC------CCC
Confidence            44677999999999999994   456799999998754332211        1224579999999998853      467


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       194 ~~~~DiwslG~il~ell~g~~pf~~~  219 (297)
T 3fxz_A          194 GPKVDIWSLGIMAIEMIEGEPPYLNE  219 (297)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.52  E-value=3.8e-15  Score=153.11  Aligned_cols=168  Identities=18%  Similarity=0.196  Sum_probs=119.5

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccC-----CcEEEEEEeccCCCCCHHHHHHHHHHHHhh--------------cCC
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILT-----ELEYAVKIIDKLPGHSRSRVFKEVETFHHC--------------QGH  105 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t-----~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~--------------~~H  105 (539)
                      ..+.|++ .+.||+|+||.||+|.+..+     ++.||||++....    ..+.+|++++..+              .+|
T Consensus        33 ~~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h  107 (364)
T 3op5_A           33 AAAAWKV-GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN----GPLFTELKFYQRAAKPEQIQKWIRTRKLKY  107 (364)
T ss_dssp             TCCEEEE-EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC----HHHHHHHHHHHHHCCHHHHHHHHHHTTCSC
T ss_pred             CCCeEEE-EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc----hhHHHHHHHHHhhhhhHHHHHHHHHhhccC
Confidence            4446776 57899999999999998765     5789999986532    2334444444332              249


Q ss_pred             CCeeeeeeeecccc--------------------------------------------cccccCCeeeecCCCCCeeccC
Q psy16343        106 PNIIQLLEYYEDDE--------------------------------------------NHERHKRIAHRDLKPENILCVH  141 (539)
Q Consensus       106 pnIv~l~~~~~~~~--------------------------------------------~~~~~~~IiHrDLK~enill~~  141 (539)
                      |||+++++++....                                            .+.|..+|+||||||+||++..
T Consensus       108 ~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          108 LGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             CCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             CCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence            99999988765421                                            0346779999999999999963


Q ss_pred             CCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCC
Q psy16343        142 PDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP  221 (539)
Q Consensus       142 ~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~  221 (539)
                      . ..+.+||+|||+++.+........ ..........||+.|+|||++..      ..++.++|||||||++|+|++|..
T Consensus       188 ~-~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~  259 (364)
T 3op5_A          188 K-NPDQVYLVDYGLAYRYCPEGVHKA-YAADPKRCHDGTIEFTSIDAHNG------VAPSRRGDLEILGYCMIQWLTGHL  259 (364)
T ss_dssp             S-CTTCEEECCCTTCEESSGGGCCCC-SSCCSSCCCCCCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred             C-CCCeEEEEECCcceecccCCcccc-cccCcccccCCCCCccCHHHhCC------CCCCchhhHHHHHHHHHHHHhCCC
Confidence            2 346799999999865432211110 00001124569999999998853      458899999999999999999999


Q ss_pred             CCCC
Q psy16343        222 PFYG  225 (539)
Q Consensus       222 Pf~~  225 (539)
                      ||.+
T Consensus       260 Pf~~  263 (364)
T 3op5_A          260 PWED  263 (364)
T ss_dssp             TTGG
T ss_pred             Cccc
Confidence            9975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.52  E-value=5.5e-15  Score=156.79  Aligned_cols=92  Identities=32%  Similarity=0.468  Sum_probs=63.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCC-------------------CCCCCccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP-------------------LATPLLLTPVGSA  181 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~-------------------~~~~~l~~~~gt~  181 (539)
                      +.|..+||||||||+|||+   +..+.+||+|||+++...........                   .........+||+
T Consensus       171 ~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  247 (458)
T 3rp9_A          171 YVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTR  247 (458)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCC
T ss_pred             HHHhCCcCCCCCChhhEEE---CCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccc
Confidence            4577899999999999999   45567999999998654322111000                   0001233568899


Q ss_pred             CcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCC
Q psy16343        182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY  220 (539)
Q Consensus       182 ~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~  220 (539)
                      .|+|||++..     ...++.++||||+||++|+|++|.
T Consensus       248 ~Y~aPE~~~~-----~~~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          248 WYRAPELILL-----QENYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             TTCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred             cccChHHhhC-----CCCCCcHhHHHHHHHHHHHHHHhc
Confidence            9999997632     346899999999999999999943

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.52  E-value=5.3e-15  Score=152.11  Aligned_cols=91  Identities=43%  Similarity=0.718  Sum_probs=71.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC-CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ-LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~-~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++...+. ...+||+|||++.......         .....+||+.|+|||++.      ...
T Consensus       130 ~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~------~~~  194 (361)
T 2yab_A          130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVN------YEP  194 (361)
T ss_dssp             HHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHT------TCC
T ss_pred             HHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC---------ccccCCCCccEECchHHc------CCC
Confidence            446679999999999999964432 2379999999985433221         123457999999999885      246


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++|+||+||++|+|++|.+||.+.
T Consensus       195 ~~~~~DiwslGvil~~ll~g~~Pf~~~  221 (361)
T 2yab_A          195 LGLEADMWSIGVITYILLSGASPFLGD  221 (361)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCC
Confidence            889999999999999999999999764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.52  E-value=7e-15  Score=148.22  Aligned_cols=90  Identities=29%  Similarity=0.551  Sum_probs=70.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+||+.|+|||++..     ...+
T Consensus       123 ~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  186 (317)
T 2pmi_A          123 FCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVN--------TFSSEVVTLWYRAPDVLMG-----SRTY  186 (317)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCEETTSCCC--------CCCCCCSCCTTCCHHHHTT-----CCCC
T ss_pred             HHHHCCeeeCCCChHHeEE---cCCCCEEECcCccceecCCCcc--------cCCCCcccccccCchHhhC-----CCCC
Confidence            4466799999999999999   4456799999998754322111        1224578999999998742     2357


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       187 ~~~~DiwslG~il~el~~g~~pf~~~  212 (317)
T 2pmi_A          187 STSIDIWSCGCILAEMITGKPLFPGT  212 (317)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.52  E-value=4.3e-15  Score=155.08  Aligned_cols=97  Identities=28%  Similarity=0.360  Sum_probs=69.2

Q ss_pred             ccccCCeeeecCCCCCeeccCC-CCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHP-DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~-~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++... +..+.+||+|||++...........     .....+||+.|+|||++..     ...
T Consensus       143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-----~~~  212 (405)
T 3rgf_A          143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA-----DLDPVVVTFWYRAPELLLG-----ARH  212 (405)
T ss_dssp             HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC---------------------CCCTTCCHHHHTT-----CCS
T ss_pred             HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccc-----cCCCceecCcccCchhhcC-----CCc
Confidence            4577799999999999999654 4457899999999854332111000     1234578999999998753     235


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      ++.++||||+||++|+|++|.+||.+..
T Consensus       213 ~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          213 YTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             ccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            8899999999999999999999998753

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.52  E-value=3.7e-15  Score=149.65  Aligned_cols=114  Identities=74%  Similarity=1.351  Sum_probs=75.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++......... ...........+||+.|+|||++..... ....+
T Consensus       126 ~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~  203 (316)
T 2ac3_A          126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSE-EASIY  203 (316)
T ss_dssp             HHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------------------CCSGGGCCHHHHHHTSH-HHHHH
T ss_pred             HHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc-ccccccccccccCCcCccChHHhhcccc-cccCC
Confidence            446679999999999999977666667999999998654322110 0111112335579999999998753110 01236


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCc
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  236 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~  236 (539)
                      +.++||||+||++|+|++|..||.+....++.|...
T Consensus       204 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~  239 (316)
T 2ac3_A          204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG  239 (316)
T ss_dssp             TTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC---
T ss_pred             CcccccHhHHHHHHHHHHCCCCCccccccccccccc
Confidence            789999999999999999999999988777777655

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.52  E-value=4.4e-15  Score=154.55  Aligned_cols=90  Identities=31%  Similarity=0.458  Sum_probs=71.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..  ..+.+||+|||+++......         .....+||+.|+|||++..     ...+
T Consensus       156 ~LH~~~ivHrDlkp~Nill~~--~~~~~kL~DFG~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~  219 (394)
T 4e7w_A          156 YIHSIGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGE---------PNVSYICSRYYRAPELIFG-----ATNY  219 (394)
T ss_dssp             HHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEECCTTC---------CCCSSCSCGGGCCHHHHTT-----CSSC
T ss_pred             HHHHCCccCCCCCHHHEEEcC--CCCcEEEeeCCCcccccCCC---------CCcccccCcCccCHHHHcC-----CCCC
Confidence            457789999999999999952  34579999999985432221         1224578999999998742     2458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       220 ~~~~DiwSlG~il~ell~g~~pf~~~  245 (394)
T 4e7w_A          220 TTNIDIWSTGCVMAELMQGQPLFPGE  245 (394)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.52  E-value=5.1e-15  Score=156.61  Aligned_cols=89  Identities=34%  Similarity=0.628  Sum_probs=69.8

Q ss_pred             cccc-CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERH-KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~-~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|. .+|+||||||+||++.   ..+.+||+|||+++.......        .....+||+.|+|||++..      ..
T Consensus       263 ~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~  325 (446)
T 4ejn_A          263 YLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGA--------TMKTFCGTPEYLAPEVLED------ND  325 (446)
T ss_dssp             HHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCCCCCTTCC-------------CCSSSCGGGCCHHHHHT------SC
T ss_pred             HHhhcCCEEECCCCHHHEEEC---CCCCEEEccCCCceeccCCCc--------ccccccCCccccCHhhcCC------CC
Confidence            3465 7899999999999994   456799999999853221111        2235689999999998853      56


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++|||||||++|+|++|..||.+.
T Consensus       326 ~~~~~DiwslG~il~ell~g~~Pf~~~  352 (446)
T 4ejn_A          326 YGRAVDWWGLGVVMYEMMCGRLPFYNQ  352 (446)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCccchhhhHHHHHHHhhCCCCCCCC
Confidence            889999999999999999999999764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.51  E-value=5.9e-15  Score=147.83  Aligned_cols=88  Identities=36%  Similarity=0.544  Sum_probs=70.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       135 ~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  196 (308)
T 3g33_A          135 FLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQM---------ALTPVVVTLWYRAPEVLLQ------STY  196 (308)
T ss_dssp             HHHHTTCCCSCCCTTTEEE---CTTSCEEECSCSCTTTSTTCC---------CSGGGGCCCSSCCHHHHHT------SCC
T ss_pred             HHHHCCcccCCCCHHHEEE---cCCCCEEEeeCccccccCCCc---------ccCCccccccccCchHHcC------CCC
Confidence            4466789999999999999   445679999999985432211         1224578999999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       197 ~~~~DiwslG~il~~l~~g~~pf~~~  222 (308)
T 3g33_A          197 ATPVDMWSVGCIFAEMFRRKPLFCGN  222 (308)
T ss_dssp             CSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.51  E-value=7.1e-15  Score=148.93  Aligned_cols=89  Identities=44%  Similarity=0.696  Sum_probs=67.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....+||+.|+|||++..      ..+
T Consensus       136 ~lH~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  198 (327)
T 3a62_A          136 HLHQKGIIYRDLKPENIMLN---HQGHVKLTDFGLCKESIHDGT--------VTHTFCGTIEYMAPEILMR------SGH  198 (327)
T ss_dssp             HHHHTTCCCCCCCTTTEEEC---TTSCEEECCCSCC------------------CTTSSCCTTSCHHHHTT------SCC
T ss_pred             HHHhCCEEcccCCHHHeEEC---CCCcEEEEeCCcccccccCCc--------cccccCCCcCccCHhhCcC------CCC
Confidence            34677999999999999994   456799999998753221111        1224579999999998852      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       199 ~~~~DiwslG~il~el~~g~~pf~~~  224 (327)
T 3a62_A          199 NRAVDWWSLGALMYDMLTGAPPFTGE  224 (327)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCcccchhHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.51  E-value=7.8e-15  Score=148.60  Aligned_cols=99  Identities=24%  Similarity=0.310  Sum_probs=72.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC--CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ--LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~--~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|..+|+||||||+||++...+.  ...+||+|||++........... ..........||+.|+|||++..      .
T Consensus       120 ~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~  192 (330)
T 2izr_A          120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH-IPYREHKSLTGTARYMSINTHLG------K  192 (330)
T ss_dssp             HHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHTT------C
T ss_pred             HHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc-ccccccCCcCCCccccChHHHcC------C
Confidence            456779999999999999965432  22399999999864332211100 00001235679999999998853      5


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++.++|||||||++|+|++|..||.+.
T Consensus       193 ~~~~~~Di~slG~il~ell~g~~Pf~~~  220 (330)
T 2izr_A          193 EQSRRDDLEALGHMFMYFLRGSLPWQGL  220 (330)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence            5889999999999999999999999764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.51  E-value=2.9e-15  Score=154.40  Aligned_cols=159  Identities=16%  Similarity=0.208  Sum_probs=110.0

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhc-CCCCeeeeeeee-------c-
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQ-GHPNIIQLLEYY-------E-  116 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~-~HpnIv~l~~~~-------~-  116 (539)
                      |++ .+.||+|+||.||+|.+..+++.||||++.+...   .....+.+|+.++..+. +||||++++..+       . 
T Consensus        64 y~~-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           64 LKL-VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred             eee-eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence            554 5789999999999999999999999999976432   12345667765555443 599977633111       0 


Q ss_pred             ----------------------------ccc----------------------------------cccccCCeeeecCCC
Q psy16343        117 ----------------------------DDE----------------------------------NHERHKRIAHRDLKP  134 (539)
Q Consensus       117 ----------------------------~~~----------------------------------~~~~~~~IiHrDLK~  134 (539)
                                                  .+.                                  .+.|.++|+||||||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp  222 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTP  222 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCH
Confidence                                        010                                  023667999999999


Q ss_pred             CCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHH
Q psy16343        135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY  214 (539)
Q Consensus       135 enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~  214 (539)
                      +||++.   ..+.+||+|||++......           .....+++.|+|||++..    ....++.++|||||||++|
T Consensus       223 ~NIll~---~~~~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~----~~~~~~~~~DiwSlG~il~  284 (371)
T 3q60_A          223 DNLFIM---PDGRLMLGDVSALWKVGTR-----------GPASSVPVTYAPREFLNA----STATFTHALNAWQLGLSIY  284 (371)
T ss_dssp             GGEEEC---TTSCEEECCGGGEEETTCE-----------EEGGGSCGGGCCHHHHTC----SEEECCHHHHHHHHHHHHH
T ss_pred             HHEEEC---CCCCEEEEecceeeecCCC-----------ccCccCCcCCcChhhccC----CCCCcCccccHHHHHHHHH
Confidence            999994   4567999999998543211           113456799999998842    1145789999999999999


Q ss_pred             HHHhCCCCCCCC
Q psy16343        215 ILLCGYPPFYGN  226 (539)
Q Consensus       215 ~lltG~~Pf~~~  226 (539)
                      +|++|..||.+.
T Consensus       285 elltg~~Pf~~~  296 (371)
T 3q60_A          285 RVWCLFLPFGLV  296 (371)
T ss_dssp             HHHHSSCSTTBC
T ss_pred             HHHhCCCCCCCc
Confidence            999999999764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.51  E-value=7.9e-15  Score=149.35  Aligned_cols=89  Identities=38%  Similarity=0.649  Sum_probs=69.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         ...+.+||+.|+|||++..     ....
T Consensus       123 ~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~  185 (336)
T 3h4j_B          123 YCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGN---------FLKTSCGSPNYAAPEVING-----KLYA  185 (336)
T ss_dssp             HHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTTSB---------TTCCCTTSTTTSCGGGSCC-----SGGG
T ss_pred             HHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccCCc---------ccccccCCcCcCCHHHHcC-----CCCC
Confidence            3455689999999999999   455679999999985432211         2235679999999998753     1123


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       186 ~~~~DiwslG~il~~ll~g~~Pf~~~  211 (336)
T 3h4j_B          186 GPEVDVWSCGIVLYVMLVGRLPFDDE  211 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred             CCccchhHHHHHHHHHHhCCCCCCCc
Confidence            67899999999999999999999764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.51  E-value=4.8e-15  Score=160.74  Aligned_cols=88  Identities=34%  Similarity=0.626  Sum_probs=71.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+||++   +..+.+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       301 yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~~~~---------~~~~~~GT~~Y~APEvl~~------~~~  362 (576)
T 2acx_A          301 DLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQ---------TIKGRVGTVGYMAPEVVKN------ERY  362 (576)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCTTC---------CEECCCSCGGGCCHHHHTT------CEE
T ss_pred             HHHHCCEeccCCchheEEE---eCCCCeEEEecccceecccCc---------cccccCCCccccCHHHHcC------CCC
Confidence            3467799999999999999   455679999999985432211         1234589999999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       363 ~~~~DiwSLGvilyeLltG~~PF~~~  388 (576)
T 2acx_A          363 TFSPDWWALGCLLYEMIAGQSPFQQR  388 (576)
T ss_dssp             SSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred             CccchHHHHHHHHHHHHhCCCCCccc
Confidence            89999999999999999999999764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.50  E-value=3.2e-15  Score=152.63  Aligned_cols=92  Identities=41%  Similarity=0.880  Sum_probs=71.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCC-CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~-~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++...+ ....+||+|||++........        ...+.+||+.|+|||++..      ..
T Consensus       131 ~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~  196 (342)
T 2qr7_A          131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLMTPCYTANFVAPEVLER------QG  196 (342)
T ss_dssp             HHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC--------CBCCSSCCSSCCCHHHHHH------HH
T ss_pred             HHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC--------ceeccCCCccccCHHHhcC------CC
Confidence            34677999999999999986443 335699999999854332211        2335679999999998853      34


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++||||+||++|+|++|..||.+.
T Consensus       197 ~~~~~DiwslG~il~ell~g~~Pf~~~  223 (342)
T 2qr7_A          197 YDAACDIWSLGVLLYTMLTGYTPFANG  223 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             CCCccCeeeHhHHHHHHhcCCCCCCCC
Confidence            778999999999999999999999753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.50  E-value=7.7e-15  Score=146.27  Aligned_cols=90  Identities=33%  Similarity=0.664  Sum_probs=66.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.........       .....+||+.|+|||++..      ..+
T Consensus       126 ~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~  189 (294)
T 4eqm_A          126 HAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLT-------QTNHVLGTVQYFSPEQAKG------EAT  189 (294)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC--------------------CCSSCCHHHHHT------CCC
T ss_pred             HHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCcccccccccc-------ccCccccCccccCHhHhcC------CCC
Confidence            4466799999999999999   44567999999988543221110       1123568999999998753      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       190 ~~~~Di~slG~~l~~ll~g~~pf~~~  215 (294)
T 4eqm_A          190 DECTDIYSIGIVLYEMLVGEPPFNGE  215 (294)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.50  E-value=9.6e-15  Score=144.89  Aligned_cols=99  Identities=24%  Similarity=0.261  Sum_probs=73.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.+||+|||++........... ..........|++.|+|||++..      ..+
T Consensus       120 ~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~~~  192 (296)
T 4hgt_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH-IPYRENKNLTGTARYASINTHLG------IEQ  192 (296)
T ss_dssp             HHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-CCCCCSCCCCSCGGGCCHHHHTT------CCC
T ss_pred             HHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc-CCCCcccccCCCccccchHHhcC------CCC
Confidence            44677999999999999996555567799999999864432221100 00001224578999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       193 ~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 4hgt_A          193 SRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CchhHHHHHHHHHHHHhcCCCCCccc
Confidence            88999999999999999999999764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.50  E-value=4.6e-15  Score=150.26  Aligned_cols=92  Identities=39%  Similarity=0.725  Sum_probs=55.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++........        ...+.+||+.|+|||++.      ...+
T Consensus       121 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~------~~~~  186 (325)
T 3kn6_A          121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--------PLKTPCFTLHYAAPELLN------QNGY  186 (325)
T ss_dssp             HHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------------------CCC
T ss_pred             HHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--------cccccCCCcCccCHHHhc------CCCC
Confidence            44667999999999999997666556799999999853322111        223457899999999875      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       187 ~~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          187 DESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             CCccchHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.50  E-value=1.4e-14  Score=146.79  Aligned_cols=91  Identities=42%  Similarity=0.718  Sum_probs=71.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCC-CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~-~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++...+ ....+||+|||++.......         .....+||+.|+|||++.      ...
T Consensus       129 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~------~~~  193 (326)
T 2y0a_A          129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVN------YEP  193 (326)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS---------CCCCCCSCTTTCCHHHHT------TCC
T ss_pred             HHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC---------ccccccCCcCcCCceeec------CCC
Confidence            34667999999999999996543 23479999999985443221         122457999999999885      246


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++||||+||++|+|++|..||.+.
T Consensus       194 ~~~~~DiwslG~il~~ll~g~~pf~~~  220 (326)
T 2y0a_A          194 LGLEADMWSIGVITYILLSGASPFLGD  220 (326)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             CCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            889999999999999999999999764

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=1.2e-14  Score=149.68  Aligned_cols=87  Identities=28%  Similarity=0.443  Sum_probs=70.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++....           .....++|+.|+|||++..     ...+
T Consensus       143 ~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~  203 (367)
T 1cm8_A          143 YIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS-----------EMTGYVVTRWYRAPEVILN-----WMRY  203 (367)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCS-----------SCCSSCSCGGGCCTHHHHT-----TTCC
T ss_pred             HHHHCCccccCcCHHHEEE---cCCCCEEEEeeeccccccc-----------ccCcCcCCCCcCCHHHHhC-----CCCC
Confidence            4466799999999999999   4456799999999854321           1224578999999998753     2458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|+.||.+.
T Consensus       204 ~~~~DiwslG~il~ell~g~~pf~~~  229 (367)
T 1cm8_A          204 TQTVDIWSVGCIMAEMITGKTLFKGS  229 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.49  E-value=1.4e-14  Score=143.91  Aligned_cols=99  Identities=24%  Similarity=0.261  Sum_probs=73.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.+||+|||++........... ..........|++.|+|||++..      ..+
T Consensus       120 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~~~  192 (296)
T 3uzp_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH-IPYRENKNLTGTARYASINTHLG------IEQ  192 (296)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-CCCCCSCCCCSCTTTCCHHHHTT------CCC
T ss_pred             HHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc-cccccccccccccccCChhhhcC------CCC
Confidence            44667999999999999996545567899999999854432221100 00001234579999999998753      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       193 ~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          193 SRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            88999999999999999999999764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.49  E-value=7.3e-15  Score=154.66  Aligned_cols=88  Identities=36%  Similarity=0.553  Sum_probs=69.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+. ..+||+|||++.....           ...+.+||+.|+|||++..      ..+
T Consensus       215 ~LH~~~ivHrDlKp~NILl~~~~~-~~vkL~DFG~a~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~  276 (429)
T 3kvw_A          215 ALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCYEHQ-----------RVYTYIQSRFYRAPEVILG------ARY  276 (429)
T ss_dssp             HHHHHTEECSCCSGGGEEESSTTS-CCEEECCCTTCEETTC-----------CCCSSCSCGGGCCHHHHHT------BCC
T ss_pred             HHHHCCeecCCCCHHHeEEccCCC-cceEEeecccceecCC-----------cccccCCCCCccChHHHhC------CCC
Confidence            346678999999999999954322 3499999998743211           2235679999999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|.+||.+.
T Consensus       277 ~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          277 GMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.49  E-value=1.6e-14  Score=147.54  Aligned_cols=94  Identities=24%  Similarity=0.415  Sum_probs=71.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++...........    ......+||+.|+|||++..     ...+
T Consensus       139 ~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-----~~~~  206 (351)
T 3mi9_A          139 YIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQP----NRYTNRVVTLWYRPPELLLG-----ERDY  206 (351)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCCCSSSSC----CCCCSSCSCGGGCCHHHHTT-----CCSC
T ss_pred             HHHHCCeeCCCCCHHHEEE---cCCCCEEEccchhcccccccccccc----cccCCcccccCccCchhhcC-----CCCC
Confidence            4466799999999999999   4456799999999854432211110    12234578999999998742     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       207 ~~~~DiwslG~il~ell~g~~pf~~~  232 (351)
T 3mi9_A          207 GPPIDLWGAGCIMAEMWTRSPIMQGN  232 (351)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.49  E-value=7.7e-15  Score=152.51  Aligned_cols=95  Identities=31%  Similarity=0.558  Sum_probs=67.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC-----
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-----  195 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~-----  195 (539)
                      +.|..+|+||||||+||++.    .+.+||+|||++..+.......      .....+||+.|+|||++......     
T Consensus       170 ~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~  239 (390)
T 2zmd_A          170 TIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSV------VKDSQVGAVNYMPPEAIKDMSSSRENGK  239 (390)
T ss_dssp             HHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCCC---------------CCSCCCGGGCCHHHHHCC--------
T ss_pred             HHHHCCeeecCCCHHHEEEE----CCeEEEEecCccccccCCCccc------cCCCCCcCCCccChHHhhhccccccccc
Confidence            45778999999999999994    2569999999986543221110      11245799999999988532110     


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ....++.++|||||||++|+|++|..||.+
T Consensus       240 ~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  269 (390)
T 2zmd_A          240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ  269 (390)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence            123588999999999999999999999965

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.49  E-value=1.1e-14  Score=155.77  Aligned_cols=90  Identities=44%  Similarity=0.865  Sum_probs=72.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         .....+||+.|+|||++.       ..+
T Consensus       136 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~-------~~~  199 (486)
T 3mwu_A          136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLR-------GTY  199 (486)
T ss_dssp             HHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-------------CCTTGGGGCCGGGGG-------SCC
T ss_pred             HHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC---------ccCCCcCCCCCCCHHHhC-------CCC
Confidence            4567799999999999999776667789999999985432221         223457999999999875       248


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       200 ~~~~DiwslG~il~~ll~g~~pf~~~  225 (486)
T 3mwu_A          200 DEKCDVWSAGVILYILLSGTPPFYGK  225 (486)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.49  E-value=1.3e-14  Score=148.60  Aligned_cols=89  Identities=31%  Similarity=0.478  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccCC----------------------CCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHP----------------------DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV  178 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~----------------------~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~  178 (539)
                      +.|..+|+||||||+||++..+                      .....+||+|||++.....           .....+
T Consensus       152 ~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----------~~~~~~  220 (360)
T 3llt_A          152 YLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----------YHGSII  220 (360)
T ss_dssp             HHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----------CCCSCC
T ss_pred             HHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC-----------CCcCcc
Confidence            4467799999999999999642                      1256799999999753221           112457


Q ss_pred             CCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       179 gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||+.|+|||++..      ..++.++||||+||++|+|++|..||.+.
T Consensus       221 gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          221 NTRQYRAPEVILN------LGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             SCGGGCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcccccCcHHHcC------CCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence            8999999998853      46889999999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.49  E-value=6.3e-15  Score=146.25  Aligned_cols=90  Identities=27%  Similarity=0.526  Sum_probs=67.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+||+.|+|||++..     ...+
T Consensus       115 ~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  178 (288)
T 1ob3_A          115 YCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVR--------KYTHEIVTLWYRAPDVLMG-----SKKY  178 (288)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC-----------------CCCTTCCHHHHTT-----CCSC
T ss_pred             HHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCcccc--------ccccccccccccCchheeC-----CCCC
Confidence            4466799999999999999   4456799999998754321111        1123468999999998742     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       179 ~~~~DiwslG~il~~l~~g~~pf~~~  204 (288)
T 1ob3_A          179 STTIDIWSVGCIFAEMVNGTPLFPGV  204 (288)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.49  E-value=2.1e-14  Score=142.64  Aligned_cols=99  Identities=23%  Similarity=0.304  Sum_probs=72.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCC--CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD--QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~--~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|..+|+||||||+||++...+  ....+||+|||++........... ..........||+.|+|||++..      .
T Consensus       121 ~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~  193 (298)
T 1csn_A          121 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH-IPYREKKNLSGTARYMSINTHLG------R  193 (298)
T ss_dssp             HHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHTT------C
T ss_pred             HHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc-ccccCccCCCCCcccCCchhhcC------C
Confidence            34778999999999999996543  234599999999864432211100 00001234579999999998753      4


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++.++||||+||++|+|++|..||.+.
T Consensus       194 ~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          194 EQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence            5789999999999999999999999764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.49  E-value=1.8e-14  Score=149.08  Aligned_cols=85  Identities=34%  Similarity=0.566  Sum_probs=68.8

Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..+|+||||||+||++..+ ..+.+||+|||++.....           .....+||+.|+|||++..      ..++.+
T Consensus       177 ~~~ivHrDlkp~NIll~~~-~~~~~kL~DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~------~~~~~~  238 (382)
T 2vx3_A          177 ELSIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQLGQ-----------RIYQYIQSRFYRSPEVLLG------MPYDLA  238 (382)
T ss_dssp             TTCEECCCCSGGGEEESST-TSCCEEECCCTTCEETTC-----------CCCSSCSCGGGCCHHHHTT------CCCCTH
T ss_pred             CCCEEcCCCCcccEEEecC-CCCcEEEEeccCceeccc-----------ccccccCCccccChHHHcC------CCCCcH
Confidence            4689999999999999542 345799999999854321           1234578999999998853      458899


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +|||||||++|+|++|.+||.+.
T Consensus       239 ~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          239 IDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.48  E-value=1.5e-14  Score=155.07  Aligned_cols=90  Identities=40%  Similarity=0.822  Sum_probs=73.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         .....+||+.|+|||++.       ..+
T Consensus       151 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~l~-------~~~  214 (494)
T 3lij_A          151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---------KMKERLGTAYYIAPEVLR-------KKY  214 (494)
T ss_dssp             HHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB---------CBCCCCSCTTTCCHHHHT-------TCB
T ss_pred             HHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc---------cccccCCCcCeeCHHHHc-------ccC
Confidence            4577799999999999999776666789999999975433211         223457999999999874       358


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       215 ~~~~DiwslG~il~~ll~g~~pf~~~  240 (494)
T 3lij_A          215 DEKCDVWSIGVILFILLAGYPPFGGQ  240 (494)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCchhHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.48  E-value=1.2e-14  Score=148.66  Aligned_cols=91  Identities=41%  Similarity=0.844  Sum_probs=65.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       163 ~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  227 (349)
T 2w4o_A          163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------LMKTVCGTPGYCAPEILRG------CAY  227 (349)
T ss_dssp             HHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------------------CGGGSCHHHHTT------CCC
T ss_pred             HHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc---------ccccccCCCCccCHHHhcC------CCC
Confidence            3467799999999999999765667889999999875432111         1224578999999998852      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       228 ~~~~DiwslG~il~ell~g~~pf~~~  253 (349)
T 2w4o_A          228 GPEVDMWSVGIITYILLCGFEPFYDE  253 (349)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.48  E-value=1.5e-14  Score=149.12  Aligned_cols=91  Identities=26%  Similarity=0.445  Sum_probs=69.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.........      ......+++.|+|||++..      ..+
T Consensus       218 ~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  282 (370)
T 2psq_A          218 YLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK------KTTNGRLPVKWMAPEALFD------RVY  282 (370)
T ss_dssp             HHHHTTEECSCCCGGGEEE---CTTCCEEECCCSSCEETTCCCTTC------TTTTTTSCGGGCCHHHHHT------CCC
T ss_pred             HHHhCCeeccccchhhEEE---CCCCCEEEccccCCcccCccccee------cccCCCcccceECHhHhcC------CCC
Confidence            3477899999999999999   455679999999985433211110      1123356789999998852      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       283 ~~~~DvwslG~il~ellt~g~~p~~~~  309 (370)
T 2psq_A          283 THQSDVWSFGVLMWEIFTLGGSPYPGI  309 (370)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            899999999999999999 99999763

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.48  E-value=6.5e-15  Score=154.24  Aligned_cols=159  Identities=21%  Similarity=0.295  Sum_probs=111.5

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeee-------------------
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQ-------------------  110 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~-------------------  110 (539)
                      +++||+|+||+||+|.+..+|+.||||++.....   ...+.+.+|+.++..+.+++|+..                   
T Consensus        83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (413)
T 3dzo_A           83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK  162 (413)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred             ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence            5789999999999999999999999999863322   224667889888877642132111                   


Q ss_pred             --eeeeecc---------------------------------cc------------------cccccCCeeeecCCCCCe
Q psy16343        111 --LLEYYED---------------------------------DE------------------NHERHKRIAHRDLKPENI  137 (539)
Q Consensus       111 --l~~~~~~---------------------------------~~------------------~~~~~~~IiHrDLK~eni  137 (539)
                        +.+++..                                 ..                  .+.|.++||||||||+||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NI  242 (413)
T 3dzo_A          163 KKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI  242 (413)
T ss_dssp             --------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             CccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceE
Confidence              0000000                                 00                  134778999999999999


Q ss_pred             eccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc---CC-CCCCCCcccchhhhhHHH
Q psy16343        138 LCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM---GP-EASGYDKRCDLWSLGVVV  213 (539)
Q Consensus       138 ll~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~---~~-~~~~~~~~~Dvws~Gvil  213 (539)
                      ++.   ..+.+||+|||+++.....           ....+| +.|+|||++....   .. ....++.++|||||||++
T Consensus       243 Ll~---~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          243 VLD---QRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             EEC---TTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             EEe---cCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            994   4556999999997542211           224567 9999999884211   00 234577899999999999


Q ss_pred             HHHHhCCCCCCCC
Q psy16343        214 YILLCGYPPFYGN  226 (539)
Q Consensus       214 ~~lltG~~Pf~~~  226 (539)
                      |+|++|+.||.+.
T Consensus       308 ~elltg~~Pf~~~  320 (413)
T 3dzo_A          308 YWIWCADLPNTDD  320 (413)
T ss_dssp             HHHHHSSCCCCTT
T ss_pred             HHHHHCCCCCCCc
Confidence            9999999999763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.48  E-value=1.3e-14  Score=149.48  Aligned_cols=87  Identities=31%  Similarity=0.465  Sum_probs=62.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++....           .....+||+.|+|||++..     ...+
T Consensus       147 ~LH~~givH~Dlkp~NIll---~~~~~~kL~DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~  207 (367)
T 2fst_X          147 YIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTAD-----------EMTGYVATRWYRAPEIMLN-----WMHY  207 (367)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECC--------------------------CCCTTCCHHHHTT-----CCSC
T ss_pred             HHHHCCeeeCCCCHhhEEE---CCCCCEEEeeccccccccc-----------cCCCcCcCcCccChHHHcC-----CcCC
Confidence            3456689999999999999   4456799999999854221           1224578999999998753     2458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       208 ~~~~DiwslG~il~ell~g~~pf~~~  233 (367)
T 2fst_X          208 NQTVDIWSVGCIMAELLTGRTLFPGT  233 (367)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.48  E-value=1.4e-14  Score=152.09  Aligned_cols=93  Identities=37%  Similarity=0.713  Sum_probs=67.5

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++...+....+||+|||++.......         ...+.+||+.|+|||++...   ....++
T Consensus       255 LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~---~~~~~~  322 (419)
T 3i6u_A          255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSV---GTAGYN  322 (419)
T ss_dssp             HHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------------CTTCCTTTTC-------CTTH
T ss_pred             HHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc---------cccccCCCCCccCceeeecC---CCCCCC
Confidence            467799999999999999776666779999999985432211         12345799999999987421   124578


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++|+||+||++|+|++|..||.+.
T Consensus       323 ~~~DiwslG~il~~lltg~~pf~~~  347 (419)
T 3i6u_A          323 RAVDCWSLGVILFICLSGYPPFSEH  347 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             chhhhHhHHHHHHHHHHCCCCCCCC
Confidence            8999999999999999999999753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.48  E-value=1.7e-14  Score=148.25  Aligned_cols=93  Identities=32%  Similarity=0.569  Sum_probs=71.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++...........     .....+||+.|+|||++..     ...+
T Consensus       143 ~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-----~~~~  209 (364)
T 3qyz_A          143 YIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTG-----FLTEYVATRWYRAPEIMLN-----SKGY  209 (364)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCGGGCBCC-----TTCCCCSCGGGCCHHHHHT-----BCSC
T ss_pred             HHHHCCeecCCCChHhEEE---CCCCCEEEEeCcceEecCCCCCccc-----cccccccccCCCCCHHhcC-----CCCC
Confidence            4466799999999999999   4456799999999854332211110     1234579999999998642     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       210 ~~~~DiwslG~il~ell~g~~pf~~~  235 (364)
T 3qyz_A          210 TKSIDIWSVGCILAEMLSNRPIFPGK  235 (364)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcchhHHHHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999774

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.48  E-value=6.6e-15  Score=152.17  Aligned_cols=165  Identities=18%  Similarity=0.237  Sum_probs=118.6

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhc--CCCCeeeee-------e
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQ--GHPNIIQLL-------E  113 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~--~HpnIv~l~-------~  113 (539)
                      .+.|++ .+.||+|+||.||+|++..+|+.||||++.+.   .......+.+|++++..+.  +|||||+++       +
T Consensus        72 ~~~y~~-~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           72 PRTLVR-GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CEEEEE-EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CceEEE-cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            355665 57899999999999999999999999999643   2233567889996555443  699999876       3


Q ss_pred             eeccc-----------------------------c----------------------------------cccccCCeeee
Q psy16343        114 YYEDD-----------------------------E----------------------------------NHERHKRIAHR  130 (539)
Q Consensus       114 ~~~~~-----------------------------~----------------------------------~~~~~~~IiHr  130 (539)
                      ++++.                             .                                  .+.|..+|+||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            22211                             0                                  02366799999


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc-----CCCCCCCCcccc
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM-----GPEASGYDKRCD  205 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~~D  205 (539)
                      ||||+||++.   ..+.+||+|||++.....           .....+| +.|+|||++....     ......++.++|
T Consensus       231 Dikp~NIll~---~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D  295 (377)
T 3byv_A          231 YLRPVDIVLD---QRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD  295 (377)
T ss_dssp             CCCGGGEEEC---TTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred             CCCHHHEEEc---CCCCEEEEechhheecCC-----------cccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence            9999999994   446799999999853211           1224567 9999999886420     000125889999


Q ss_pred             hhhhhHHHHHHHhCCCCCCCC
Q psy16343        206 LWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||||||++|+|++|..||.+.
T Consensus       296 vwSlG~il~elltg~~Pf~~~  316 (377)
T 3byv_A          296 AWALGLVIYWIWCADLPITKD  316 (377)
T ss_dssp             HHHHHHHHHHHHHSSCCC---
T ss_pred             HHHHHHHHHHHHHCCCCCccc
Confidence            999999999999999999764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.48  E-value=2.1e-14  Score=153.30  Aligned_cols=99  Identities=25%  Similarity=0.318  Sum_probs=74.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+...+..+.+||+|||+++.......... ..........||+.|+|||++..      ..+
T Consensus       118 yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~------~~~  190 (483)
T 3sv0_A          118 FVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH-IPYRENKNLTGTARYASVNTHLG------IEQ  190 (483)
T ss_dssp             HHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHTT------CCC
T ss_pred             HHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc-cccccccccCCCccccCHHHhcC------CCC
Confidence            45677999999999999996555667899999999865433221100 00001124579999999999853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       191 s~~sDvwSlGvil~elltG~~Pf~~~  216 (483)
T 3sv0_A          191 SRRDDLESLGYVLMYFLRGSLPWQGL  216 (483)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            89999999999999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.48  E-value=1.1e-14  Score=146.32  Aligned_cols=92  Identities=34%  Similarity=0.625  Sum_probs=64.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........     .....+|++.|+|||++..      ..+
T Consensus       131 ~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~------~~~  196 (311)
T 3ork_A          131 FSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSVT-----QTAAVIGTAQYLSPEQARG------DSV  196 (311)
T ss_dssp             HHHHTTCCCCCCCGGGEEEE---TTSCEEECCCSCC-----------------------CCTTCCHHHHHT------CCC
T ss_pred             HHHHCCCCcCCCCHHHEEEc---CCCCEEEeeccCcccccccccccc-----cccccCcCcccCCHHHhcC------CCC
Confidence            44667999999999999994   445699999999854332211100     1223568999999998853      468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       197 ~~~~Di~slG~~l~~ll~g~~pf~~~  222 (311)
T 3ork_A          197 DARSDVYSLGCVLYEVLTGEPPFTGD  222 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.48  E-value=2e-14  Score=142.74  Aligned_cols=89  Identities=25%  Similarity=0.447  Sum_probs=68.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+||+.|+|||++..     ...+
T Consensus       116 ~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  179 (292)
T 3o0g_A          116 FCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVR--------CYSAEVVTLWYRPPDVLFG-----AKLY  179 (292)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSCCS--------CCCSCCSCGGGCCHHHHTT-----CSCC
T ss_pred             HHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCccc--------cccCCccccCCcChHHHcC-----CCCc
Confidence            4566799999999999999   4456799999999854322211        1224578999999998753     2347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||..
T Consensus       180 ~~~~DiwslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          180 STSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             CTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             CchHHHHHHHHHHHHHHHcCCCCcC
Confidence            8999999999999999999888644

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.47  E-value=1.6e-14  Score=146.04  Aligned_cols=90  Identities=29%  Similarity=0.551  Sum_probs=66.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        .....+||+.|+|||++..     ...+
T Consensus       115 ~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  178 (324)
T 3mtl_A          115 YCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTK--------TYDNEVVTLWYRPPDILLG-----STDY  178 (324)
T ss_dssp             HHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEEECC--------------------CGGGCCHHHHTT-----CCCC
T ss_pred             HHHHCCccCCCcCHHHEEEC---CCCCEEEccCcccccccCCcc--------ccccccCcccccChhhhcC-----CCCC
Confidence            44667999999999999994   456799999998754322111        1224468999999998742     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       179 ~~~~DiwslG~il~~l~~g~~pf~~~  204 (324)
T 3mtl_A          179 STQIDMWGVGCIFYEMATGRPLFPGS  204 (324)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=2.3e-14  Score=146.22  Aligned_cols=90  Identities=31%  Similarity=0.472  Sum_probs=70.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+||+.|+|||++..     ...+
T Consensus       127 ~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  190 (346)
T 1ua2_A          127 YLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNR--------AYTHQVVTRWYRAPELLFG-----ARMY  190 (346)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCC--------CCCCSCCCCTTCCHHHHTT-----CSCC
T ss_pred             HHHHCCEECCCCCHHHEEE---cCCCCEEEEecccceeccCCcc--------cCCcccccccccCchHhhC-----CCCC
Confidence            3467799999999999999   4456799999999854322111        1224578999999998742     2357


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|.+||.+.
T Consensus       191 ~~~~DiwslG~il~ell~g~~~~~~~  216 (346)
T 1ua2_A          191 GVGVDMWAVGCILAELLLRVPFLPGD  216 (346)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.47  E-value=1.6e-14  Score=149.53  Aligned_cols=92  Identities=28%  Similarity=0.445  Sum_probs=71.7

Q ss_pred             ccccC-CeeeecCCCCCeeccCCC----------------------------------------------CCCCeEEEec
Q psy16343        121 HERHK-RIAHRDLKPENILCVHPD----------------------------------------------QLSPVKLCDF  153 (539)
Q Consensus       121 ~~~~~-~IiHrDLK~enill~~~~----------------------------------------------~~~~ikl~Df  153 (539)
                      +.|.+ +|+||||||+||++...+                                              ....+||+||
T Consensus       161 ~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  240 (397)
T 1wak_A          161 YLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADL  240 (397)
T ss_dssp             HHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCG
T ss_pred             HHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccc
Confidence            44666 899999999999996432                                              1137999999


Q ss_pred             cccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCC
Q psy16343        154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE  229 (539)
Q Consensus       154 gl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~  229 (539)
                      |++.....           .....+||+.|+|||++..      ..++.++|||||||++|+|++|..||.+....
T Consensus       241 G~a~~~~~-----------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~  299 (397)
T 1wak_A          241 GNACWVHK-----------HFTEDIQTRQYRSLEVLIG------SGYNTPADIWSTACMAFELATGDYLFEPHSGE  299 (397)
T ss_dssp             GGCEETTB-----------CSCSCCSCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred             cccccccc-----------cCccCCCCCcccCChhhcC------CCCCcHHHHHHHHHHHHHHhhCCCCCCCCccc
Confidence            98754321           1224578999999998853      45889999999999999999999999875443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.47  E-value=1.6e-14  Score=148.97  Aligned_cols=88  Identities=31%  Similarity=0.508  Sum_probs=63.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       142 ~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  203 (371)
T 2xrw_A          142 HLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGY  203 (371)
T ss_dssp             HHHHTTCCCSCCCGGGEEEC---TTSCEEECCCCC-------------------------CTTCCHHHHTT------CCC
T ss_pred             HHHHCCeecccCCHHHEEEc---CCCCEEEEEeeccccccccc---------ccCCceecCCccCHHHhcC------CCC
Confidence            44667999999999999994   45679999999975432111         1224578999999999853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       204 ~~~~DiwslG~il~el~~g~~pf~~~  229 (371)
T 2xrw_A          204 KENVDIWSVGCIMGEMIKGGVLFPGT  229 (371)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.47  E-value=2.2e-14  Score=145.07  Aligned_cols=91  Identities=26%  Similarity=0.451  Sum_probs=68.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.........      ......++..|+|||++..      ..+
T Consensus       130 ~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  194 (325)
T 3kex_A          130 YLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDKQL------LYSEAKTPIKWMALESIHF------GKY  194 (325)
T ss_dssp             HHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGGSCCCTTCC------C-----CCTTTSCHHHHHH------CCC
T ss_pred             HHHhCCCCCCccchheEEE---CCCCeEEECCCCcccccCcccccc------cccCCCCcccccChHHhcc------CCC
Confidence            3467799999999999999   445679999999986543222111      1123457789999998853      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++||||+||++|+|++ |..||.+.
T Consensus       195 ~~~~Di~slG~~l~el~~~g~~p~~~~  221 (325)
T 3kex_A          195 THQSDVWSYGVTVWELMTFGAEPYAGL  221 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             ChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence            899999999999999999 99999763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.47  E-value=2.4e-14  Score=144.62  Aligned_cols=89  Identities=33%  Similarity=0.591  Sum_probs=70.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        ......||+.|+|||++..      ..+
T Consensus       156 ~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  218 (321)
T 2c30_A          156 YLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQISKDVP--------KRKSLVGTPYWMAPEVISR------SLY  218 (321)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSSSC--------CBCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeeeeecccCcc--------ccccccCCccccCHhhhcC------CCC
Confidence            34667999999999999994   456799999998754332111        1224579999999998852      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       219 ~~~~Dv~slG~il~el~~g~~pf~~~  244 (321)
T 2c30_A          219 ATEVDIWSLGIMVIEMVDGEPPYFSD  244 (321)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=1e-14  Score=147.47  Aligned_cols=90  Identities=30%  Similarity=0.542  Sum_probs=70.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++... ..+.+||+|||++.......         ......|++.|+|||++..      ..+
T Consensus       117 ~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  180 (321)
T 1tki_A          117 FLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGD---------NFRLLFTAPEYYAPEVHQH------DVV  180 (321)
T ss_dssp             HHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTC---------EEEEEESCGGGSCHHHHTT------CEE
T ss_pred             HHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeECCCCC---------ccccccCChhhcCcHHhcC------CCC
Confidence            4466799999999999999642 24679999999985433221         1223468999999998853      447


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       181 ~~~~DiwslG~il~~ll~g~~pf~~~  206 (321)
T 1tki_A          181 STATDMWSLGTLVYVLLSGINPFLAE  206 (321)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCcCC
Confidence            88999999999999999999999764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.47  E-value=2.5e-14  Score=145.59  Aligned_cols=89  Identities=27%  Similarity=0.542  Sum_probs=71.1

Q ss_pred             ccccCCeeeecCCCCCeeccCC----------------CCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcc
Q psy16343        121 HERHKRIAHRDLKPENILCVHP----------------DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM  184 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~----------------~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~  184 (539)
                      +.|..+|+||||||+||++...                +....+||+|||++.....           .....+||+.|+
T Consensus       138 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~  206 (355)
T 2eu9_A          138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE-----------HHTTIVATRHYR  206 (355)
T ss_dssp             HHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS-----------CCCSSCSCGGGC
T ss_pred             HHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc-----------cccCCcCCCccc
Confidence            4466799999999999999654                2457799999998753211           112457899999


Q ss_pred             cccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       185 aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |||++..      ..++.++|+||+||++|+|++|..||.+.
T Consensus       207 aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (355)
T 2eu9_A          207 PPEVILE------LGWAQPCDVWSIGCILFEYYRGFTLFQTH  242 (355)
T ss_dssp             CHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCeeeec------CCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            9998852      45889999999999999999999999764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=1.6e-14  Score=148.09  Aligned_cols=92  Identities=41%  Similarity=0.593  Sum_probs=69.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++........       .....+||+.|+|||++..    ....+
T Consensus       174 ~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~----~~~~~  239 (355)
T 1vzo_A          174 HLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETE-------RAYDFCGTIEYMAPDIVRG----GDSGH  239 (355)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEECCGGGGG-------GGCGGGSCCTTCCHHHHTT----CC---
T ss_pred             HHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCeecccCCCC-------cccCcccCcCccChhhhcC----CCCCC
Confidence            3467899999999999999   45567999999987543221110       1224579999999998853    12347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||...
T Consensus       240 ~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          240 DKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCccC
Confidence            78999999999999999999999754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.47  E-value=1.5e-14  Score=146.33  Aligned_cols=92  Identities=32%  Similarity=0.546  Sum_probs=69.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++..........      .....+||+.|+|||++..     ...+
T Consensus       120 ~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~-----~~~~  185 (323)
T 3tki_A          120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLKR-----REFH  185 (323)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEETTEEC------CBCSCCSCGGGSCHHHHHC-----SSBC
T ss_pred             HHHHCCccccccchHHEEE---eCCCCEEEEEeeccceeccCCccc------ccCCCccCcCccCcHHhcc-----CCCC
Confidence            3456799999999999999   445679999999985432221110      1224579999999998853     1224


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       186 ~~~~DiwslG~il~~ll~g~~pf~~~  211 (323)
T 3tki_A          186 AEPVDVWSCGIVLTAMLAGELPWDQP  211 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCC
Confidence            67899999999999999999999764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.47  E-value=2.4e-14  Score=142.68  Aligned_cols=91  Identities=33%  Similarity=0.563  Sum_probs=68.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        ......||+.|+|||++....   ...+
T Consensus       152 ~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~  217 (298)
T 2zv2_A          152 YLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDA--------LLSNTVGTPAFMAPESLSETR---KIFS  217 (298)
T ss_dssp             HHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCEECSSSSC--------EECCCCSCGGGCCGGGCCTTC---CCEE
T ss_pred             HHHHCCeeccCCCHHHEEEC---CCCCEEEecCCCccccccccc--------cccCCcCCccccChhhhccCC---CCCC
Confidence            34566899999999999994   456799999999754332211        122457999999999875311   1113


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       218 ~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          218 GKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCC
Confidence            6789999999999999999999975

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.46  E-value=7.5e-15  Score=151.30  Aligned_cols=94  Identities=22%  Similarity=0.381  Sum_probs=72.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++...+....+||+|||+++.+.......      ......||+.|+|||++..      ..+
T Consensus       196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  263 (367)
T 3l9p_A          196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR------KGGCAMLPVKWMPPEAFME------GIF  263 (367)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCT------TCCGGGSCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccc------cCCCcCCcccEECHHHhcC------CCC
Confidence            4477899999999999999766666779999999875332111100      1123467899999998753      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       264 ~~~~DvwslG~il~ellt~g~~pf~~~  290 (367)
T 3l9p_A          264 TSKTDTWSFGVLLWEIFSLGYMPYPSK  290 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999998 99999763

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.46  E-value=2.6e-14  Score=146.19  Aligned_cols=87  Identities=29%  Similarity=0.553  Sum_probs=68.9

Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..+|+||||||+||++..  ..+.+||+|||++.......         .....+||+.|+|||++..     ...++.+
T Consensus       149 ~~~ivH~Dlkp~NIll~~--~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~  212 (360)
T 3e3p_A          149 SVNVCHRDIKPHNVLVNE--ADGTLKLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFG-----NQHYTTA  212 (360)
T ss_dssp             TTCCBCSCCCGGGEEEET--TTTEEEECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTT-----CSSCCTH
T ss_pred             CCCeecCcCCHHHEEEeC--CCCcEEEeeCCCceecCCCC---------CcccccCCcceeCHHHHcC-----CCCCCcH
Confidence            779999999999999953  24579999999985433221         1224578999999998742     2347889


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCC
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +||||+||++|+|++|..||.+.
T Consensus       213 ~Di~slG~il~ell~g~~pf~~~  235 (360)
T 3e3p_A          213 VDIWSVGCIFAEMMLGEPIFRGD  235 (360)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCC
Confidence            99999999999999999999764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.46  E-value=2.5e-14  Score=150.74  Aligned_cols=97  Identities=31%  Similarity=0.437  Sum_probs=66.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCC--------------CCCCCCccCCCCCCCcccc
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS--------------PLATPLLLTPVGSAEFMAP  186 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~--------------~~~~~~l~~~~gt~~y~aP  186 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++..........              ......+...+||+.|+||
T Consensus       144 ~LH~~givHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP  220 (432)
T 3n9x_A          144 FIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP  220 (432)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCH
T ss_pred             HHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCH
Confidence            4466799999999999999   4556799999999865432211100              0000123467899999999


Q ss_pred             cccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       187 E~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      |++..     ...++.++||||+||++|+|++|..||..
T Consensus       221 E~~~~-----~~~~~~~~DiwSlG~il~ell~g~~p~~~  254 (432)
T 3n9x_A          221 ELILL-----QENYTKSIDIWSTGCIFAELLNMLQSHIN  254 (432)
T ss_dssp             HHHTT-----CSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred             HHHhc-----CCCCCcccccchHHHHHHHHHhccccccc
Confidence            98632     34688999999999999999997776654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.46  E-value=1.3e-14  Score=147.79  Aligned_cols=95  Identities=31%  Similarity=0.560  Sum_probs=65.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC-----
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-----  195 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~-----  195 (539)
                      +.|..+|+||||||+||++.    .+.+||+|||++..........      .....+||+.|+|||++......     
T Consensus       123 ~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~  192 (343)
T 3dbq_A          123 TIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSV------VKDSQVGTVNYMPPEAIKDMSSSRENGK  192 (343)
T ss_dssp             HHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC------------------CCCCSSCCHHHHHHCC-------
T ss_pred             HHHhCCeecCCCCcceEEEE----CCcEEEeecccccccCcccccc------cCCCCcCCcCcCCHHHHhhccccccccc
Confidence            44667999999999999994    2459999999986443221110      11245799999999987532111     


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ....++.++|||||||++|+|++|..||.+
T Consensus       193 ~~~~~~~~~DiwslG~il~ell~g~~pf~~  222 (343)
T 3dbq_A          193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ  222 (343)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence            124578899999999999999999999965

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.46  E-value=3.1e-14  Score=146.50  Aligned_cols=93  Identities=39%  Similarity=0.727  Sum_probs=71.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++..+....         .....+||+.|+|||++..........+
T Consensus       215 ~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~  282 (365)
T 2y7j_A          215 FLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGY  282 (365)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCB
T ss_pred             HHHhCCeecCCCCHHHEEE---CCCCCEEEEecCcccccCCCc---------ccccCCCCCCccChhhccccccccCcCC
Confidence            3466799999999999999   445679999999875433221         1224579999999998754322223457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||.+
T Consensus       283 ~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          283 GKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CchhhHHhHHHHHHHHHHCCCCCCC
Confidence            8899999999999999999999975

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.46  E-value=2.7e-14  Score=147.83  Aligned_cols=90  Identities=33%  Similarity=0.535  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..  ..+.+||+|||++.......         .....+|++.|+|||++..     ...+
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~  219 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLG-----ATEY  219 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTT-----CSSC
T ss_pred             HHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcC-----CCCC
Confidence            456779999999999999952  24579999999985432221         1224578999999998752     2348


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       220 ~~~~DiwslG~il~ell~g~~pf~~~  245 (383)
T 3eb0_A          220 TPSIDLWSIGCVFGELILGKPLFSGE  245 (383)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcchhhhhHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.46  E-value=2.9e-14  Score=147.84  Aligned_cols=98  Identities=21%  Similarity=0.332  Sum_probs=70.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........... .........+||+.|+|||++..    ....+
T Consensus       143 ~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~----~~~~~  214 (389)
T 3gni_B          143 YIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSPEVLQQ----NLQGY  214 (389)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEECEETTEECS-CBCCCCTTCTTTGGGSCHHHHST----TSSCB
T ss_pred             HHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceeecccccccc-ccccccccccccccccCHHHHhc----cCCCC
Confidence            4566799999999999999   4556799999998643221111000 00001223478999999998853    12458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       215 ~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          215 DAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence            89999999999999999999999764

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.46  E-value=1.1e-14  Score=155.61  Aligned_cols=90  Identities=39%  Similarity=0.817  Sum_probs=73.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.+||+|||++.......         .....+||+.|+|||++.       ..+
T Consensus       141 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~-------~~~  204 (484)
T 3nyv_A          141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---------KMKDKIGTAYYIAPEVLH-------GTY  204 (484)
T ss_dssp             HHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC---------SHHHHTTGGGTCCHHHHH-------TCC
T ss_pred             HHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc---------ccccCCCCccccCceeec-------CCC
Confidence            4567799999999999999766667789999999875432211         123457999999999874       248


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       205 ~~~~DiwslG~il~~ll~g~~pf~~~  230 (484)
T 3nyv_A          205 DEKCDVWSTGVILYILLSGCPPFNGA  230 (484)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCcceeHHHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.46  E-value=2.6e-14  Score=143.67  Aligned_cols=87  Identities=30%  Similarity=0.510  Sum_probs=61.7

Q ss_pred             cccCC--eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        122 ERHKR--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       122 ~~~~~--IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .|..+  |+||||||+||++   +..+.+||+|||++........        ......||+.|+|||++..      ..
T Consensus       153 LH~~~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~  215 (309)
T 3p86_A          153 LHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTFL--------SSKSAAGTPEWMAPEVLRD------EP  215 (309)
T ss_dssp             HHTSSSCCCCTTCCGGGEEE---CTTCCEEECCCC-------------------------CCTTSCHHHHTT------CC
T ss_pred             HHcCCCCEECCCCChhhEEE---eCCCcEEECCCCCCcccccccc--------ccccCCCCccccChhhhcC------CC
Confidence            45667  9999999999999   4556799999998753221110        1124578999999998853      45


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ++.++||||+||++|+|++|..||.+
T Consensus       216 ~~~~~DiwslG~il~elltg~~Pf~~  241 (309)
T 3p86_A          216 SNEKSDVYSFGVILWELATLQQPWGN  241 (309)
T ss_dssp             CCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            78899999999999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.45  E-value=3.5e-14  Score=143.41  Aligned_cols=89  Identities=31%  Similarity=0.552  Sum_probs=70.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC----------------CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcc
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ----------------LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM  184 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~----------------~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~  184 (539)
                      +.|..+|+||||||+||++...+.                ...+||+|||++.....           .....+||+.|+
T Consensus       133 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~  201 (339)
T 1z57_A          133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-----------HHSTLVSTRHYR  201 (339)
T ss_dssp             HHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS-----------CCCSSCSCGGGC
T ss_pred             HHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc-----------ccccccCCcccc
Confidence            456679999999999999965432                55799999998753221           112457899999


Q ss_pred             cccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       185 aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |||++..      ..++.++|+||+||++|+|++|..||.+.
T Consensus       202 aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~  237 (339)
T 1z57_A          202 APEVILA------LGWSQPCDVWSIGCILIEYYLGFTVFPTH  237 (339)
T ss_dssp             CHHHHTT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ChHHhhC------CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence            9998852      45889999999999999999999999764

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.45  E-value=2.6e-14  Score=141.56  Aligned_cols=90  Identities=40%  Similarity=0.707  Sum_probs=69.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.+||+|||++.......         ......|++.|+|||++.       ..+
T Consensus       139 ~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~-------~~~  202 (285)
T 3is5_A          139 YFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---------HSTNAAGTALYMAPEVFK-------RDV  202 (285)
T ss_dssp             HHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------------------CTTGGGCCHHHHT-------TCC
T ss_pred             HHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc---------cCcCcccccCcCChHHhc-------cCC
Confidence            3466799999999999999776667789999999985432211         112456899999999874       357


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       203 ~~~~Di~slG~il~~ll~g~~pf~~~  228 (285)
T 3is5_A          203 TFKCDIWSAGVVMYFLLTGCLPFTGT  228 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcccCeehHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.45  E-value=3.6e-14  Score=152.48  Aligned_cols=90  Identities=44%  Similarity=0.865  Sum_probs=73.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         .....+||+.|+|||++.       ..+
T Consensus       161 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~-------~~~  224 (504)
T 3q5i_A          161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY---------KLRDRLGTAYYIAPEVLK-------KKY  224 (504)
T ss_dssp             HHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHT-------TCB
T ss_pred             HHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC---------ccccccCCcCCCCHHHhc-------cCC
Confidence            4467799999999999999776666679999999985433221         223457999999999874       358


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       225 ~~~~DiwslG~il~~ll~g~~pf~~~  250 (504)
T 3q5i_A          225 NEKCDVWSCGVIMYILLCGYPPFGGQ  250 (504)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.45  E-value=1.4e-14  Score=146.25  Aligned_cols=96  Identities=24%  Similarity=0.363  Sum_probs=69.8

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++   +..+.+||+|||++..........      .....+||+.|+|||++..... ....++
T Consensus       147 ~~~~~ivH~Dlkp~Nill---~~~~~~kL~DFg~a~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~-~~~~~~  216 (322)
T 3soc_A          147 GHKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKSAG------DTHGQVGTRRYMAPEVLEGAIN-FQRDAF  216 (322)
T ss_dssp             EEECEEECSCCSGGGEEE---CTTCCEEECCCTTCEEECTTSCCC------CCTTCCCCGGGCCHHHHTTCCC-CCHHHH
T ss_pred             ccCCCEEeCCCChHhEEE---CCCCeEEEccCCcccccccccCcc------ccccCccCccccCHhhcccccc-cCcCCC
Confidence            345589999999999999   455679999999985433221111      1223579999999998853110 012355


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      .++|||||||++|+|++|..||.+..
T Consensus       217 ~~~DiwslG~il~el~tg~~pf~~~~  242 (322)
T 3soc_A          217 LRIDMYAMGLVLWELASRCTAADGPV  242 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred             ccchhHHHHHHHHHHHhCCCCCCCCc
Confidence            67899999999999999999998753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.45  E-value=2.8e-14  Score=143.32  Aligned_cols=86  Identities=28%  Similarity=0.451  Sum_probs=65.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         ......||+.|+|||++.       ..+
T Consensus       172 ~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~-------~~~  232 (311)
T 3p1a_A          172 HLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVELGTAG---------AGEVQEGDPRYMAPELLQ-------GSY  232 (311)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTCEECC---------------CCCCCGGGCCGGGGG-------TCC
T ss_pred             HHHHCCEecCCCCHHHEEE---CCCCCEEEccceeeeecccCC---------CCcccCCCccccCHhHhc-------CCC
Confidence            3466799999999999999   445679999999875432211         112346899999999874       257


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..|+.+
T Consensus       233 ~~~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          233 GTAADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             STHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCC
Confidence            8899999999999999999776644

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.45  E-value=1.4e-14  Score=144.14  Aligned_cols=89  Identities=28%  Similarity=0.412  Sum_probs=62.1

Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..+|+||||||+||++.   ..+.+||+|||++............    .....+||+.|+|||++..........++.+
T Consensus       131 ~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (301)
T 3q4u_A          131 KPAIAHRDLKSKNILVK---KNGQCCIADLGLAVMHSQSTNQLDV----GNNPRVGTKRYMAPEVLDETIQVDCFDSYKR  203 (301)
T ss_dssp             BCEEECSCCCGGGEEEC---TTSCEEECCCTTCEEEETTTTEEEC----CCCCCCCCGGGCCHHHHTTCCCTTCHHHHHH
T ss_pred             CCCeecCCCChHhEEEc---CCCCEEEeeCCCeeecccccccccc----cccccccccceeChhhhcCcCCCCcccCCch
Confidence            56899999999999994   4567999999987543222111000    1123479999999998853211000034468


Q ss_pred             cchhhhhHHHHHHHhC
Q psy16343        204 CDLWSLGVVVYILLCG  219 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG  219 (539)
                      +|||||||++|+|++|
T Consensus       204 ~DvwslG~il~el~tg  219 (301)
T 3q4u_A          204 VDIWAFGLVLWEVARR  219 (301)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHhh
Confidence            9999999999999999

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.45  E-value=2.5e-14  Score=148.44  Aligned_cols=90  Identities=39%  Similarity=0.725  Sum_probs=70.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++... ..+.+||+|||++.......         .....+||+.|+|||++..      ..+
T Consensus       164 ~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  227 (387)
T 1kob_A          164 HMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDE---------IVKVTTATAEFAAPEIVDR------EPV  227 (387)
T ss_dssp             HHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTS---------CEEEECSSGGGCCHHHHTT------CCB
T ss_pred             HHHhCCeeecccchHHeEEecC-CCCceEEEecccceecCCCc---------ceeeeccCCCccCchhccC------CCC
Confidence            3467799999999999999532 33579999999985432211         1223468999999998852      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       228 ~~~~DiwSlG~il~elltg~~Pf~~~  253 (387)
T 1kob_A          228 GFYTDMWAIGVLGYVLLSGLSPFAGE  253 (387)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             CCcccEeeHhHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999763

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.45  E-value=4.4e-14  Score=139.42  Aligned_cols=91  Identities=36%  Similarity=0.710  Sum_probs=72.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         ......|++.|+|||++..      ..+
T Consensus       120 ~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~  184 (284)
T 3kk8_A          120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKK------DPY  184 (284)
T ss_dssp             HHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC---------BCCCSCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc---------cccCCCCCcCCcCchhhcC------CCC
Confidence            4466799999999999999776666779999999875432211         1123568999999998852      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~pf~~~  210 (284)
T 3kk8_A          185 SKPVDIWACGVILYILLVGYPPFWDE  210 (284)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcccchHHHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.45  E-value=2.6e-14  Score=146.16  Aligned_cols=87  Identities=34%  Similarity=0.536  Sum_probs=69.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.....            ....+||+.|+|||++...   ....+
T Consensus       169 ~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~------------~~~~~gt~~y~aPE~~~~~---~~~~~  230 (348)
T 1u5q_A          169 YLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP------------ANSFVGTPYWMAPEVILAM---DEGQY  230 (348)
T ss_dssp             HHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSSS------------BCCCCSCGGGCCHHHHHTT---SSCCB
T ss_pred             HHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCceecCC------------CCcccCCcceeCHhhhccc---cCCCC
Confidence            44677999999999999995   445799999998754321            1135789999999987432   12457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||.+
T Consensus       231 ~~~~DiwslG~il~ell~g~~p~~~  255 (348)
T 1u5q_A          231 DGKVDVWSLGITCIELAERKPPLFN  255 (348)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            8899999999999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.45  E-value=3.7e-14  Score=151.03  Aligned_cols=89  Identities=37%  Similarity=0.649  Sum_probs=69.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         ...+.+||+.|+|||++..     ....
T Consensus       131 ~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~  193 (476)
T 2y94_A          131 YCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGE---------FLRTSCGSPNYAAPEVISG-----RLYA  193 (476)
T ss_dssp             HHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCTTC---------CBCCCCSCSTTCCHHHHTT-----CCBC
T ss_pred             HHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhccccc---------cccccCCCcCeEChhhccC-----CCCC
Confidence            4466799999999999999   445679999999985432211         2335679999999998853     1223


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       194 ~~~~DiwSlGvil~elltG~~Pf~~~  219 (476)
T 2y94_A          194 GPEVDIWSSGVILYALLCGTLPFDDD  219 (476)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCcceehhhHHHHHHHhhCCCCCCCC
Confidence            67899999999999999999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.45  E-value=4.9e-14  Score=138.69  Aligned_cols=90  Identities=42%  Similarity=0.819  Sum_probs=72.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..++....++|+|||++.......         ......|++.|+|||++.       ..+
T Consensus       121 ~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~-------~~~  184 (277)
T 3f3z_A          121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---------MMRTKVGTPYYVSPQVLE-------GLY  184 (277)
T ss_dssp             HHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHT-------TCB
T ss_pred             HHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc---------chhccCCCCCccChHHhc-------ccC
Confidence            4466799999999999999766667789999999875433221         122457899999999874       237


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~p~~~~  210 (277)
T 3f3z_A          185 GPECDEWSAGVMMYVLLCGYPPFSAP  210 (277)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhehhHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999763

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.45  E-value=4.5e-14  Score=142.33  Aligned_cols=91  Identities=26%  Similarity=0.409  Sum_probs=69.8

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++   +..+.+||+|||++..........      ......|++.|+|||++..      ..++
T Consensus       155 lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~  219 (321)
T 2qkw_B          155 LHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTH------LSTVVKGTLGYIDPEYFIK------GRLT  219 (321)
T ss_dssp             HHHTTEECSCCCSTTEEE---CTTCCEEECCCTTCEECSSSSCCC------CBCCCEEETTTCCHHHHHH------CBCC
T ss_pred             hcCCCeecCCCCHHHEEE---CCCCCEEEeecccccccccccccc------cccccCCCccccCHHHhcC------CCCC
Confidence            466799999999999999   455679999999875322111100      1123458999999998753      4578


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      .++||||+||++|+|++|+.||.+..
T Consensus       220 ~~~Di~slG~il~ell~g~~p~~~~~  245 (321)
T 2qkw_B          220 EKSDVYSFGVVLFEVLCARSAIVQSL  245 (321)
T ss_dssp             THHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred             cccchHhHHHHHHHHHhCCCcccccC
Confidence            89999999999999999999997653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.44  E-value=6.1e-14  Score=137.28  Aligned_cols=55  Identities=18%  Similarity=0.189  Sum_probs=41.1

Q ss_pred             CceeceeCceEEEEEEEccCCcE--EEEEEeccCCCC------------------------CHHHHHHHHHHHHhhcCCC
Q psy16343         53 GEILGKGAYASVQTCVNILTELE--YAVKIIDKLPGH------------------------SRSRVFKEVETFHHCQGHP  106 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~--vAvK~i~k~~~~------------------------~~~~~~~Ei~~l~~~~~Hp  106 (539)
                      .+.||+|+||.||+|.+..+|+.  ||||+++.....                        ....+.+|+.+|..+. |+
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~  130 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK-EA  130 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH-hC
Confidence            46899999999999998888999  999997532110                        0125778999998875 66


Q ss_pred             Ce
Q psy16343        107 NI  108 (539)
Q Consensus       107 nI  108 (539)
                      ||
T Consensus       131 ~i  132 (258)
T 1zth_A          131 GV  132 (258)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.44  E-value=3.2e-14  Score=144.03  Aligned_cols=90  Identities=34%  Similarity=0.635  Sum_probs=69.4

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++......+.+||+|||++.......         .....+|++.|+|||++.      ...++
T Consensus       147 LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~------~~~~~  211 (327)
T 3lm5_A          147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---------ELREIMGTPEYLAPEILN------YDPIT  211 (327)
T ss_dssp             HHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------------------CCCGGGCCHHHHT------TCCCC
T ss_pred             HHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc---------ccccccCCcCccCCeeec------CCCCC
Confidence            466789999999999999764446789999999985432211         122457999999999885      34678


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++|+||+||++|+|++|..||.+.
T Consensus       212 ~~~DiwslG~il~~ll~g~~pf~~~  236 (327)
T 3lm5_A          212 TATDMWNIGIIAYMLLTHTSPFVGE  236 (327)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCC
Confidence            8999999999999999999999763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.44  E-value=3.4e-14  Score=144.87  Aligned_cols=97  Identities=22%  Similarity=0.257  Sum_probs=71.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+ ...+||+|||+++.+........ ..........|++.|+|||++..      ..+
T Consensus       166 ~LH~~~ivH~Dlkp~NIll~~~~-~~~~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~~~  237 (345)
T 2v62_A          166 YIHENEYVHGDIKAANLLLGYKN-PDQVYLADYGLSYRYCPNGNHKQ-YQENPRKGHNGTIEFTSLDAHKG------VAL  237 (345)
T ss_dssp             HHHHTTEECSCCSGGGEEEESSS-TTSEEECCCTTCEESSGGGCCCC-CCCCGGGCSCSCTTTCCHHHHHT------CCC
T ss_pred             HHHhCCeeCCCcCHHHEEEccCC-CCcEEEEeCCCceeccccccccc-chhccccccCCCccccCHHHhcC------CCC
Confidence            34667999999999999996533 23799999999865432211110 00011234579999999998753      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||.+
T Consensus       238 ~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          238 SRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccc
Confidence            8999999999999999999999964

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.44  E-value=3.1e-14  Score=144.81  Aligned_cols=88  Identities=34%  Similarity=0.522  Sum_probs=68.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.......         .....+||+.|+|||++..     ...+
T Consensus       145 ~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~  207 (335)
T 3dls_A          145 YLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLMG-----NPYR  207 (335)
T ss_dssp             HHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHTT-----CCBC
T ss_pred             HHHhCCeEEeccCHHHEEEc---CCCcEEEeecccceECCCCC---------ceeccCCCccccChhhhcC-----CCCC
Confidence            34677999999999999994   45679999999875433221         1234579999999998753     1223


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||..
T Consensus       208 ~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          208 GPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             CCcccchhHHHHHHHHHhCCCchhh
Confidence            7789999999999999999999954

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.44  E-value=3.5e-14  Score=146.69  Aligned_cols=90  Identities=43%  Similarity=0.745  Sum_probs=70.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++... ....+||+|||++.......         .....+||+.|+|||++.      ...+
T Consensus       202 ~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~------~~~~  265 (373)
T 2x4f_A          202 HMHQMYILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPRE---------KLKVNFGTPEFLAPEVVN------YDFV  265 (373)
T ss_dssp             HHHHTTEECCCCCGGGEEEEET-TTTEEEECCCSSCEECCTTC---------BCCCCCSSCTTCCHHHHT------TCBC
T ss_pred             HHHHCCcccccCCHHHEEEecC-CCCcEEEEeCCCceecCCcc---------ccccccCCCcEeChhhcc------CCCC
Confidence            3466799999999999998532 23569999999985433221         122346999999999874      2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       266 ~~~~DiwslG~il~elltg~~pf~~~  291 (373)
T 2x4f_A          266 SFPTDMWSVGVIAYMLLSGLSPFLGD  291 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.44  E-value=1.6e-14  Score=146.33  Aligned_cols=170  Identities=23%  Similarity=0.368  Sum_probs=112.8

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHh-hcCCCCeeeeeeeec---------
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH-CQGHPNIIQLLEYYE---------  116 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~-~~~HpnIv~l~~~~~---------  116 (539)
                      +.|++ .+.||+|+||.||+|+.  +++.||||++...   ....+..|.+++.. ..+||||+++++++.         
T Consensus        13 ~~y~~-~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           13 DNLKL-LELIGRGRYGAVYKGSL--DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TSEEE-EEEEEECSSEEEEEEEE--TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             HHhhe-eeecccCCCeEEEEEEE--CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            34554 57899999999999965  7899999999642   23444555554432 247999999975321         


Q ss_pred             ---------ccc--------------------------cccccC---------CeeeecCCCCCeeccCCCCCCCeEEEe
Q psy16343        117 ---------DDE--------------------------NHERHK---------RIAHRDLKPENILCVHPDQLSPVKLCD  152 (539)
Q Consensus       117 ---------~~~--------------------------~~~~~~---------~IiHrDLK~enill~~~~~~~~ikl~D  152 (539)
                               .+.                          .+.|..         +|+||||||+||++.   ..+.+||+|
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~kL~D  163 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDGTCVISD  163 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTSCEEECC
T ss_pred             EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCCcEEEee
Confidence                     111                          023566         999999999999994   456799999


Q ss_pred             ccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC-CCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        153 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-EASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       153 fgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ||++..+..................+||+.|+|||++...... ....++.++|||||||++|+|++|..||..
T Consensus       164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            9998654322111100011122345799999999988531100 002355789999999999999999777654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.44  E-value=1.3e-14  Score=146.90  Aligned_cols=91  Identities=29%  Similarity=0.412  Sum_probs=67.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||+++.........      ......+++.|+|||++..      ..+
T Consensus       132 ~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  196 (327)
T 3poz_A          132 YLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEKEY------HAEGGKVPIKWMALESILH------RIY  196 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTHHHHHTTTCC-------------CCCGGGSCHHHHHH------CCC
T ss_pred             HHhhCCeeCCCCChheEEEC---CCCCEEEccCcceeEccCCcccc------cccCCCccccccChHHhcc------CCC
Confidence            44667999999999999994   44569999999875432221111      1112356789999998853      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       197 ~~~~Di~slG~il~ellt~g~~p~~~~  223 (327)
T 3poz_A          197 THQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CchhhhhhhHHHHHHHHhcCCCCccCC
Confidence            899999999999999999 99999763

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.44  E-value=2.1e-14  Score=145.44  Aligned_cols=93  Identities=27%  Similarity=0.462  Sum_probs=66.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCC--CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD--QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~--~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|..+|+||||||+||++...+  ....+||+|||++........        .....+||+.|+|||++..     ..
T Consensus       147 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~  213 (329)
T 3gbz_A          147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR--------QFTHEIITLWYRPPEILLG-----SR  213 (329)
T ss_dssp             HHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-------------------CCTTCCHHHHTT-----CC
T ss_pred             HHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc--------ccCCCcCCccccCHHHhcC-----CC
Confidence            44677999999999999996543  345699999998754321111        1224568999999998753     23


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++.++||||+||++|+|++|..||.+.
T Consensus       214 ~~~~~~DiwslG~il~ell~g~~pf~~~  241 (329)
T 3gbz_A          214 HYSTSVDIWSIACIWAEMLMKTPLFPGD  241 (329)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence            4789999999999999999999999764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.43  E-value=3.5e-14  Score=142.95  Aligned_cols=96  Identities=31%  Similarity=0.546  Sum_probs=71.4

Q ss_pred             ccccCCeeeecCCCCCeecc-CCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc--CCCC
Q psy16343        121 HERHKRIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM--GPEA  197 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~-~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~--~~~~  197 (539)
                      +.|..+|+||||||+||++. ..+....+||+|||++.......         ......||+.|+|||++....  ....
T Consensus       127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~  197 (319)
T 4euu_A          127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQ  197 (319)
T ss_dssp             HHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCC
T ss_pred             HHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC---------ceeecccCCCccCHHHhhhcccccccc
Confidence            44667999999999999974 33445569999999985433221         122456899999999875211  1113


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ..++.++||||+||++|+|++|..||..
T Consensus       198 ~~~~~~~DiwslG~il~el~~g~~pf~~  225 (319)
T 4euu_A          198 KKYGATVDLWSIGVTFYHAATGSLPFRP  225 (319)
T ss_dssp             CCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            5678899999999999999999999965

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.43  E-value=6.4e-14  Score=144.46  Aligned_cols=87  Identities=28%  Similarity=0.462  Sum_probs=67.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.....           .....+||+.|+|||++..     ...+
T Consensus       159 ~LH~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~  219 (371)
T 4exu_A          159 YIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADA-----------EMTGYVVTRWYRAPEVILS-----WMHY  219 (371)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTCCEEECSTTCC-------------------CTTCCCTTSCHHHHSC-----CSCC
T ss_pred             HHHHCCCcCCCcCHHHeEE---CCCCCEEEEecCccccccc-----------CcCCcccCccccCHHHhcC-----CCCC
Confidence            3466799999999999999   4556799999998753221           1224578999999998753     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       220 ~~~~DiwslG~il~el~~g~~pf~~~  245 (371)
T 4exu_A          220 NQTVDIWSVGCIMAEMLTGKTLFKGK  245 (371)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.42  E-value=5.7e-14  Score=140.64  Aligned_cols=90  Identities=31%  Similarity=0.547  Sum_probs=65.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+|++.|+|||++..     ...+
T Consensus       117 ~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~-----~~~~  180 (311)
T 4agu_A          117 FCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSD--------YYDDEVATRWYRSPELLVG-----DTQY  180 (311)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC--------------------GGGCCHHHHHT-----CSCC
T ss_pred             HHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCccc--------ccCCCcCCccccChHHHhc-----CCCC
Confidence            4466699999999999999   4456799999998754322111        1124578999999998752     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       181 ~~~~Di~slG~il~~l~~g~~p~~~~  206 (311)
T 4agu_A          181 GPPVDVWAIGCVFAELLSGVPLWPGK  206 (311)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.42  E-value=7e-14  Score=141.60  Aligned_cols=90  Identities=34%  Similarity=0.602  Sum_probs=66.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++........        .....+|++.|+|||++..     ...+
T Consensus       139 ~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~-----~~~~  202 (331)
T 4aaa_A          139 FCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE--------VYDDEVATRWYRAPELLVG-----DVKY  202 (331)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC--------------------CCCCCTTCCHHHHTT-----CTTC
T ss_pred             HHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecCCcc--------ccCCCcCCccccCcccccC-----CCCc
Confidence            4466799999999999999   4456799999998754322111        1224568999999998752     2357


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       203 ~~~~Di~slG~il~~l~~g~~pf~~~  228 (331)
T 4aaa_A          203 GKAVDVWAIGCLVTEMFMGEPLFPGD  228 (331)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             chHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.42  E-value=3e-14  Score=144.30  Aligned_cols=91  Identities=29%  Similarity=0.412  Sum_probs=64.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       132 ~LH~~~ivH~Dikp~NIl~~---~~~~~kL~DfG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  196 (327)
T 3lzb_A          132 YLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEKEY------HAEGGKVPIKWMALESILH------RIY  196 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEEE---ETTEEEECCTTC----------------------CCCGGGSCHHHHHH------CCC
T ss_pred             HHhhCCCcCCCCCHHHEEEc---CCCCEEEccCcceeEccCccccc------cccCCCccccccCHHHHcC------CCC
Confidence            45667999999999999994   34569999999985432221110      1123346788999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++||||+||++|+|++ |..||.+.
T Consensus       197 ~~~~Di~slG~il~ell~~g~~p~~~~  223 (327)
T 3lzb_A          197 THQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            899999999999999999 99999763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.42  E-value=7.7e-14  Score=141.82  Aligned_cols=97  Identities=35%  Similarity=0.567  Sum_probs=69.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..+ ....+||+|||++...........    .......||+.|+|||++..    ....+
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~----~~~~~  253 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEY----YGMTTKAGTPYFVAPEVLNT----TNESY  253 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTC----SSSCC
T ss_pred             HHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCcccc----ccccccCCCccccCchhhcc----CCCCC
Confidence            4466799999999999999532 224799999998854322111000    01224578999999998753    12457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       254 ~~~~DiwslG~il~el~~g~~pf~~~  279 (345)
T 3hko_A          254 GPKCDAWSAGVLLHLLLMGAVPFPGV  279 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.42  E-value=8.4e-14  Score=146.76  Aligned_cols=102  Identities=29%  Similarity=0.487  Sum_probs=69.2

Q ss_pred             ccccCCeeeecCCCCCeeccCC----------CCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccc
Q psy16343        121 HERHKRIAHRDLKPENILCVHP----------DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN  190 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~----------~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~  190 (539)
                      +.|..+|+||||||+||++...          +....+||+|||++...........    ......+||+.|+|||++.
T Consensus       130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~  205 (434)
T 2rio_A          130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR----TNLNNPSGTSGWRAPELLE  205 (434)
T ss_dssp             HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC------------------CCTTSCHHHHS
T ss_pred             HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccce----eeecCCCCCCCccCHHHhc
Confidence            4566799999999999999754          2445799999999865432211100    0122457999999999885


Q ss_pred             cccC-CCCCCCCcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        191 AFMG-PEASGYDKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       191 ~~~~-~~~~~~~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      .... .....++.++||||+||++|+|++ |..||...
T Consensus       206 ~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  243 (434)
T 2rio_A          206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK  243 (434)
T ss_dssp             CCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred             cccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence            3211 012468899999999999999999 89999653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.41  E-value=3.1e-14  Score=145.56  Aligned_cols=165  Identities=27%  Similarity=0.437  Sum_probs=125.6

Q ss_pred             cchhcccCceeceeCceEEEEEE-----EccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCV-----NILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~-----~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      .+.|++ .+.||+|+||.||+|.     +..+++.||||++.+... .....+.+|++++.++.+|||||++++++.+..
T Consensus        21 ~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           21 RDRLKL-GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             GGGEEE-EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             ccceee-ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            455665 5789999999999998     556778999999975332 223568899999999878999999987653210


Q ss_pred             --------------------------------------------------------------------------------
Q psy16343        120 --------------------------------------------------------------------------------  119 (539)
Q Consensus       120 --------------------------------------------------------------------------------  119 (539)
                                                                                                      
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence                                                                                            


Q ss_pred             ---------------------------cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCC
Q psy16343        120 ---------------------------NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP  172 (539)
Q Consensus       120 ---------------------------~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~  172 (539)
                                                 .+.|..+|+||||||+||++.   ..+.+||+|||++..........      
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~------  250 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYV------  250 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCE------
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccch------
Confidence                                       134778999999999999994   45679999999985432211110      


Q ss_pred             CccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       173 ~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      ......||+.|+|||++..      ..++.++|||||||++|+|++ |..||.+.
T Consensus       251 ~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~  299 (359)
T 3vhe_A          251 RKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGV  299 (359)
T ss_dssp             EC--CEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hccccCCCceeEChhhhcC------CCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence            1123467889999998853      458899999999999999998 99999764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.41  E-value=4e-14  Score=145.47  Aligned_cols=90  Identities=22%  Similarity=0.387  Sum_probs=68.2

Q ss_pred             ccccC-CeeeecCCCCCeeccCC---CCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        121 HERHK-RIAHRDLKPENILCVHP---DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       121 ~~~~~-~IiHrDLK~enill~~~---~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +.|.+ +|+||||||+||++...   +....+||+|||++.....           .....+||+.|+|||++..     
T Consensus       146 ~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----  209 (373)
T 1q8y_A          146 YMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----------HYTNSIQTREYRSPEVLLG-----  209 (373)
T ss_dssp             HHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB-----------CCCSCCSCGGGCCHHHHHT-----
T ss_pred             HHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC-----------CCCCCCCCccccCcHHHhC-----
Confidence            44666 89999999999999643   2334699999998754321           1123478999999998853     


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                       ..++.++|||||||++|+|++|..||.+..
T Consensus       210 -~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          210 -APWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             -CCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             -CCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence             457899999999999999999999998653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.41  E-value=3.1e-14  Score=144.77  Aligned_cols=90  Identities=47%  Similarity=0.911  Sum_probs=56.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++......          ......|++.|+|||++.      ...+
T Consensus       143 ~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~~t~~y~aPE~~~------~~~~  206 (336)
T 3fhr_A          143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN----------ALQTPCYTPYYVAPEVLG------PEKY  206 (336)
T ss_dssp             HHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------------------CHH
T ss_pred             HHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc----------ccccCCCCcCccChhhhC------CCCC
Confidence            346679999999999999977666778999999987543211          122456899999999874      2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       207 ~~~~Di~slG~il~~l~~g~~pf~~~  232 (336)
T 3fhr_A          207 DKSCDMWSLGVIMYILLCGFPPFYSN  232 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            78999999999999999999999764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.41  E-value=1.4e-13  Score=137.86  Aligned_cols=97  Identities=26%  Similarity=0.348  Sum_probs=69.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCC------CCCCCccCCCCCCCcccccccccccC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP------LATPLLLTPVGSAEFMAPEIVNAFMG  194 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~------~~~~~l~~~~gt~~y~aPE~~~~~~~  194 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++............      .........+||+.|+|||++.    
T Consensus       123 ~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----  195 (310)
T 3s95_A          123 YLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN----  195 (310)
T ss_dssp             HHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHT----
T ss_pred             HHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhc----
Confidence            4466799999999999999   45567999999998543322111000      0000112567999999999885    


Q ss_pred             CCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        195 PEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       195 ~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                        ...++.++||||+||++|+|++|..||...
T Consensus       196 --~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          196 --GRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             --TCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             --CCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence              356889999999999999999999998754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.41  E-value=7e-14  Score=147.26  Aligned_cols=97  Identities=29%  Similarity=0.425  Sum_probs=67.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC--CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ--LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~--~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|..+|+||||||+||++..++.  ...+||+|||++...........     .....+||+.|+|||++...   ...
T Consensus       133 ~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~-----~~~~~~gt~~y~APE~l~~~---~~~  204 (432)
T 3p23_A          133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS-----RRSGVPGTEGWIAPEMLSED---CKE  204 (432)
T ss_dssp             HHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----------------CCSCTTSCCGGGTSCC------
T ss_pred             HHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCccee-----eccccCCCcCccChhhhhcc---ccc
Confidence            457779999999999999965432  34578999999865432211100     12245799999999988531   124


Q ss_pred             CCCcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      .++.++||||+||++|+|++ |..||..
T Consensus       205 ~~t~~~DiwSlG~il~ellt~g~~pf~~  232 (432)
T 3p23_A          205 NPTYTVDIFSAGCVFYYVISEGSHPFGK  232 (432)
T ss_dssp             CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence            56779999999999999999 8999854

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.41  E-value=1.1e-13  Score=139.40  Aligned_cols=91  Identities=43%  Similarity=0.718  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC-CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ-LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~-~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++...+. ...+||+|||++.......         ......|++.|+|||++..      ..
T Consensus       130 ~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~  194 (321)
T 2a2a_A          130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNY------EP  194 (321)
T ss_dssp             HHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC---------CCCCCCSCGGGCCHHHHTT------CC
T ss_pred             HHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc---------cccccCCCCCccCcccccC------CC
Confidence            346679999999999999964432 2379999999875433221         1224568999999998752      45


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++|+||+||++|+|++|..||.+.
T Consensus       195 ~~~~~Di~slG~il~~l~~g~~pf~~~  221 (321)
T 2a2a_A          195 LGLEADMWSIGVITYILLSGASPFLGD  221 (321)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCccccHHHHHHHHHHHHCCCCCCCC
Confidence            788999999999999999999999763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.41  E-value=1.1e-13  Score=136.88  Aligned_cols=90  Identities=30%  Similarity=0.521  Sum_probs=68.5

Q ss_pred             cccCC--eeeecCCCCCeeccCCCC--CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        122 ERHKR--IAHRDLKPENILCVHPDQ--LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       122 ~~~~~--IiHrDLK~enill~~~~~--~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      .|..+  |+||||||+||++...+.  ...+||+|||++.....           ......|++.|+|||++..    ..
T Consensus       138 lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~----~~  202 (287)
T 4f0f_A          138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH-----------SVSGLLGNFQWMAPETIGA----EE  202 (287)
T ss_dssp             HHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS-----------CEECCCCCCTTSCGGGSSC----SS
T ss_pred             HHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc-----------cccccCCCccccCchhhcc----CC
Confidence            45567  999999999999965432  23489999998753211           1224578999999998742    12


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ..++.++|+||+||++|+|++|..||...
T Consensus       203 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~  231 (287)
T 4f0f_A          203 ESYTEKADTYSFAMILYTILTGEGPFDEY  231 (287)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            45778999999999999999999999753

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.41  E-value=4.6e-14  Score=142.80  Aligned_cols=91  Identities=25%  Similarity=0.414  Sum_probs=66.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++...........     ......+|+.|+|||++..      ..+
T Consensus       166 ~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~------~~~  231 (325)
T 3kul_A          166 YLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAY-----TTTGGKIPIRWTAPEAIAF------RTF  231 (325)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECC----CCE-----ECC---CCGGGSCHHHHHH------CEE
T ss_pred             HHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccccccCcccee-----eccCCCCcccccCHhHhcC------CCC
Confidence            3467799999999999999   4556799999999854332211100     1112345778999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++||||+||++|+|++ |..||.+
T Consensus       232 ~~~~Di~slG~il~ell~~g~~p~~~  257 (325)
T 3kul_A          232 SSASDVWSFGVVMWEVLAYGERPYWN  257 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCccc
Confidence            889999999999999999 9999965

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.41  E-value=5.1e-14  Score=142.06  Aligned_cols=87  Identities=25%  Similarity=0.434  Sum_probs=68.0

Q ss_pred             cccC---CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        122 ERHK---RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       122 ~~~~---~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      .|..   +|+||||||+||++   +..+.+||+|||++.........       ......||+.|+|||++..      .
T Consensus       147 lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~  210 (326)
T 3uim_A          147 LHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTH-------VTTAVRGTIGHIAPEYLST------G  210 (326)
T ss_dssp             HHHSSSSCEECCCCSGGGEEE---CTTCCEEECCCSSCEECCSSSSC-------EECCCCSCGGGCCHHHHHH------S
T ss_pred             HHhCCCCCeEeCCCchhhEEE---CCCCCEEeccCccccccCccccc-------ccccccCCcCccCHHHhcc------C
Confidence            4566   89999999999999   44567999999998543221111       1123458999999998753      3


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      .++.++||||+||++|+|++|..||.
T Consensus       211 ~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          211 KSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             EECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CCCccccchhHHHHHHHHHhCCCccc
Confidence            47889999999999999999999995

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.41  E-value=5.6e-14  Score=144.42  Aligned_cols=90  Identities=34%  Similarity=0.605  Sum_probs=60.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++... ....+||+|||+++......         .....+||+.|+|||++..      ..+
T Consensus       131 ~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~  194 (361)
T 3uc3_A          131 YCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHS---------QPKSTVGTPAYIAPEVLLR------QEY  194 (361)
T ss_dssp             HHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC------------------------CTTSCHHHHHC------SSC
T ss_pred             HHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccccccccC---------CCCCCcCCCCcCChhhhcC------CCC
Confidence            4467799999999999999532 23459999999875322111         1124579999999998753      334


Q ss_pred             C-cccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 D-KRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~-~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      . .++||||+||++|+|++|..||.+.
T Consensus       195 ~~~~~DiwslG~il~ell~g~~Pf~~~  221 (361)
T 3uc3_A          195 DGKIADVWSCGVTLYVMLVGAYPFEDP  221 (361)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred             CCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence            4 4489999999999999999999764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=6.9e-14  Score=141.49  Aligned_cols=92  Identities=24%  Similarity=0.301  Sum_probs=60.6

Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      +|+||||||+||++.   ..+.+||+|||++............    .....+||+.|+|||++..........++.++|
T Consensus       162 ~ivH~Dikp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  234 (337)
T 3mdy_A          162 AIAHRDLKSKNILVK---KNGTCCIADLGLAVKFISDTNEVDI----PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMAD  234 (337)
T ss_dssp             CEECSCCCGGGEEEC---TTSCEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHH
T ss_pred             CEEecccchHHEEEC---CCCCEEEEeCCCceeeccccccccC----CCCCCccCcceeChhhcccccCCccccCccccc
Confidence            899999999999994   4567999999997543322111000    112457999999999885311100000112489


Q ss_pred             hhhhhHHHHHHHhCCCCCC
Q psy16343        206 LWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~  224 (539)
                      ||||||++|+|++|..|+.
T Consensus       235 iwslG~il~el~tg~~~~~  253 (337)
T 3mdy_A          235 MYSFGLILWEVARRCVSGG  253 (337)
T ss_dssp             HHHHHHHHHHHHTTBCBTT
T ss_pred             hHHHHHHHHHHHhccCccc
Confidence            9999999999999965553

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.41  E-value=7.8e-14  Score=140.85  Aligned_cols=90  Identities=28%  Similarity=0.444  Sum_probs=69.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+  ..+||+|||++.......         ......|++.|+|||++..     ...+
T Consensus       145 ~lH~~~ivH~Dikp~Nil~~~~~--~~~kl~Dfg~a~~~~~~~---------~~~~~~~~~~y~aPE~~~~-----~~~~  208 (330)
T 3nsz_A          145 YCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQ---------EYNVRVASRYFKGPELLVD-----YQMY  208 (330)
T ss_dssp             HHHHTTEECCCCSGGGEEEETTT--TEEEECCCTTCEECCTTC---------CCCSCCSCGGGCCHHHHTT-----CCCC
T ss_pred             HHHhCCeeeCCCCHHHEEEcCCC--CEEEEEeCCCceEcCCCC---------ccccccccccccChhhhcC-----CCcC
Confidence            34778999999999999995322  369999999985433221         1224578999999998742     2458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||...
T Consensus       209 ~~~~DiwslG~il~~ll~g~~p~~~~  234 (330)
T 3nsz_A          209 DYSLDMWSLGCMLASMIFRKEPFFHG  234 (330)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccC
Confidence            88999999999999999999999653

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.40  E-value=1.2e-13  Score=139.11  Aligned_cols=88  Identities=35%  Similarity=0.574  Sum_probs=69.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.......         ......|++.|+|||++..      ..+
T Consensus       135 ~lH~~gi~H~dlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~  196 (326)
T 1blx_A          135 FLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQ------SSY  196 (326)
T ss_dssp             HHHHTTCCCCCCCGGGEEEC---TTCCEEECSCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHTT------CCC
T ss_pred             HHHHCCceeccCCHHHeEEc---CCCCEEEecCcccccccCCC---------CccccccccceeCHHHHhc------CCC
Confidence            34667999999999999994   45679999999875432111         1224568999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       197 ~~~~Di~slG~il~~l~~g~~pf~~~  222 (326)
T 1blx_A          197 ATPVDLWSVGCIFAEMFRRKPLFRGS  222 (326)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC
Confidence            88999999999999999999999764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.40  E-value=6.5e-14  Score=141.11  Aligned_cols=91  Identities=22%  Similarity=0.353  Sum_probs=63.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||.+..      ..+
T Consensus       152 ~LH~~~ivH~Dikp~NIli~---~~~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  216 (323)
T 3qup_A          152 YLSSRNFIHRDLAARNCMLA---EDMTVCVADFGLSRKIYSGDYYR------QGCASKLPVKWLALESLAD------NLY  216 (323)
T ss_dssp             HHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC-----------------------CCGGGCCHHHHHH------CCC
T ss_pred             HHHcCCcccCCCCcceEEEc---CCCCEEEeecccccccccccccc------ccccccCcccccCchhhcC------CCC
Confidence            44667999999999999994   45679999999985432221110      1112346778999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++||||+||++|+|++ |..||.+.
T Consensus       217 ~~~~Di~slG~il~ell~~g~~p~~~~  243 (323)
T 3qup_A          217 TVHSDVWAFGVTMWEIMTRGQTPYAGI  243 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCccchhhHHHHHHHHHhCCCCCcccc
Confidence            899999999999999999 89999763

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.40  E-value=6e-14  Score=141.44  Aligned_cols=94  Identities=36%  Similarity=0.698  Sum_probs=71.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         ......|++.|+|||++...   ....+
T Consensus       129 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~---~~~~~  196 (322)
T 2ycf_A          129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSV---GTAGY  196 (322)
T ss_dssp             HHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH---------HHHHHHSCCTTCCHHHHHHT---TTTTC
T ss_pred             HHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc---------ccccccCCcCccCchhhccC---CCCCC
Confidence            3466799999999999999766666679999999875432110         11234689999999987421   12457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       197 ~~~~Di~slG~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          197 NRAVDCWSLGVILFICLSGYPPFSEH  222 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCccc
Confidence            88999999999999999999999753

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.40  E-value=1e-13  Score=141.41  Aligned_cols=98  Identities=29%  Similarity=0.467  Sum_probs=69.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCC--CCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP--LATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~--~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++............  .........+||+.|+|||++..     ..
T Consensus       127 ~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~  198 (353)
T 2b9h_A          127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT-----SA  198 (353)
T ss_dssp             HHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS-----CC
T ss_pred             HHHHCCeecCCCCHHHeEE---cCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc-----CC
Confidence            4466699999999999999   44567999999998544321111000  00001224578999999998642     24


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++.++|+||+||++|+|++|..||.+.
T Consensus       199 ~~~~~~Di~slG~il~~l~~g~~pf~~~  226 (353)
T 2b9h_A          199 KYSRAMDVWSCGCILAELFLRRPIFPGR  226 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            5788999999999999999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.40  E-value=1.4e-13  Score=135.65  Aligned_cols=87  Identities=36%  Similarity=0.656  Sum_probs=66.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++......          ......|++.|+|||++.      ...+
T Consensus       124 ~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~------~~~~  184 (279)
T 3fdn_A          124 YCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS----------RRTDLCGTLDYLPPEMIE------GRMH  184 (279)
T ss_dssp             HHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC------------------CCCCTTCCHHHHT------TCCC
T ss_pred             HHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcc----------cccccCCCCCccCHhHhc------cCCC
Confidence            4456699999999999999   45567999999987432211          112457899999999875      2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       185 ~~~~Di~slG~il~~l~~g~~p~~~~  210 (279)
T 3fdn_A          185 DEKVDLWSLGVLCYEFLVGKPPFEAN  210 (279)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CccchhHhHHHHHHHHHHCCCCCCCC
Confidence            78999999999999999999999753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.40  E-value=1.2e-13  Score=143.06  Aligned_cols=91  Identities=27%  Similarity=0.456  Sum_probs=69.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       206 ~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DFG~a~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  270 (382)
T 3tt0_A          206 YLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYK------KTTNGRLPVKWMAPEALFD------RIY  270 (382)
T ss_dssp             HHHHTTCCCSCCCGGGEEEC---TTCCEEECSCSCCCCSSCCCTTC------CCTTCCCGGGGSCHHHHHS------CCC
T ss_pred             HHHhCCEecCCCCcceEEEc---CCCcEEEcccCcccccccccccc------cccCCCCCcceeCHHHhcC------CCC
Confidence            34677999999999999994   45679999999985433211110      1123456789999998853      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       271 ~~~~DiwslG~il~ellt~g~~p~~~~  297 (382)
T 3tt0_A          271 THQSDVWSFGVLLWEIFTLGGSPYPGV  297 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999999 99999763

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.40  E-value=9e-14  Score=138.88  Aligned_cols=90  Identities=42%  Similarity=0.844  Sum_probs=71.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+..+.++|+|||++......          ......|++.|+|||++..      ..+
T Consensus       121 ~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~  184 (304)
T 2jam_A          121 YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----------IMSTACGTPGYVAPEVLAQ------KPY  184 (304)
T ss_dssp             HHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB----------TTHHHHSCCCBCCTTTBSS------CSC
T ss_pred             HHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC----------ccccccCCCCccChHHhcc------CCC
Confidence            446679999999999999976666778999999987432111          1123468999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       185 ~~~~Di~slG~il~~l~~g~~pf~~~  210 (304)
T 2jam_A          185 SKAVDCWSIGVITYILLCGYPPFYEE  210 (304)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999763

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.40  E-value=1e-13  Score=141.67  Aligned_cols=96  Identities=22%  Similarity=0.301  Sum_probs=70.0

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++...+ ...+||+|||++........... ..........|++.|+|||++..      ..++
T Consensus       175 LH~~~ivH~Dikp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~------~~~~  246 (352)
T 2jii_A          175 LHENEYVHGNVTAENIFVDPED-QSQVTLAGYGFAFRYCPSGKHVA-YVEGSRSPHEGDLEFISMDLHKG------CGPS  246 (352)
T ss_dssp             HHHTTCBCSCCCGGGEEEETTE-EEEEEECCGGGCBCSSGGGCCCC-CCTTSSCTTCSCTTTCCHHHHTT------CCCC
T ss_pred             HHhCCccCCCCCHHHEEEcCCC-CceEEEecCcceeeccCCCcccc-ccccccccccCCccccCHHHHcc------CCCC
Confidence            4677999999999999995322 12699999999865432211100 00001123479999999998853      4688


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      .++|||||||++|+|++|..||.+
T Consensus       247 ~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          247 RRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             chhhHHHHHHHHHHHHhCCCCccc
Confidence            999999999999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.39  E-value=1.3e-13  Score=140.93  Aligned_cols=87  Identities=28%  Similarity=0.445  Sum_probs=66.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.....           .....+|++.|+|||++..     ...+
T Consensus       141 ~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~  201 (353)
T 3coi_A          141 YIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHADA-----------EMTGYVVTRWYRAPEVILS-----WMHY  201 (353)
T ss_dssp             HHHHTTCCCSSCCGGGEEEC---TTCCEEECSTTCTTC-------------------CCSBCCSCHHHHSC-----CSCC
T ss_pred             HHHHCCcccCCCCHHHEeEC---CCCcEEEeecccccCCCC-----------CccccccCcCcCCHHHHhC-----cCCC
Confidence            34566899999999999994   456799999998754221           1123468999999998753     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       202 ~~~~Di~slG~il~el~~g~~pf~~~  227 (353)
T 3coi_A          202 NQTVDIWSVGCIMAEMLTGKTLFKGK  227 (353)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.39  E-value=4.8e-14  Score=139.24  Aligned_cols=90  Identities=31%  Similarity=0.464  Sum_probs=60.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..   .+.+||+|||++.........       ......+++.|+|||++..      ..+
T Consensus       131 ~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  194 (281)
T 1mp8_A          131 YLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESINF------RRF  194 (281)
T ss_dssp             HHHHTTCCCSCCSGGGEEEEE---TTEEEECC--------------------------CCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCeecccccHHHEEECC---CCCEEECccccccccCccccc-------ccccCCCcccccChhhccc------CCC
Confidence            446679999999999999953   456999999987543221110       1112346788999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       195 ~~~~Di~slG~~l~ell~~g~~pf~~~  221 (281)
T 1mp8_A          195 TSASDVWMFGVCMWEILMHGVKPFQGV  221 (281)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCccCchHHHHHHHHHHhcCCCCCCcC
Confidence            889999999999999996 99999764

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.39  E-value=1.1e-13  Score=141.77  Aligned_cols=89  Identities=29%  Similarity=0.463  Sum_probs=64.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         ......|++.|+|||++..     ...+
T Consensus       149 ~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~  211 (362)
T 3pg1_A          149 VLHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTADA---------NKTHYVTHRWYRAPELVMQ-----FKGF  211 (362)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECCTTC------------------------CGGGCCHHHHTT-----CTTC
T ss_pred             HHHHCcCEecCCChHHEEE---cCCCCEEEEecCccccccccc---------ccceecccceecCcHHhcC-----CCCC
Confidence            3466799999999999999   445679999999875322111         1123568899999998753     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       212 ~~~~DiwslG~il~~l~~g~~pf~~~  237 (362)
T 3pg1_A          212 TKLVDMWSAGCVMAEMFNRKALFRGS  237 (362)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.39  E-value=1.1e-13  Score=139.53  Aligned_cols=94  Identities=30%  Similarity=0.519  Sum_probs=66.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCC----CCCCccCCCCCCCcccccccccccCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL----ATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~----~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.............    ........+||+.|+|||++..     
T Consensus       179 ~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----  250 (332)
T 3qd2_B          179 FLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG-----  250 (332)
T ss_dssp             HHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC-----
T ss_pred             HHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcC-----
Confidence            34667999999999999994   45679999999986543321110000    0001224579999999998853     


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCC
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPF  223 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf  223 (539)
                       ..++.++||||+||++|+|++|..|+
T Consensus       251 -~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          251 -NNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             -CCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             -CCCcchhhHHHHHHHHHHHHHcCCCh
Confidence             46889999999999999999987664

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.39  E-value=7.8e-14  Score=138.38  Aligned_cols=93  Identities=30%  Similarity=0.473  Sum_probs=62.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..   .+.++|+|||++.........      .......|++.|+|||++...   ....+
T Consensus       135 ~lH~~~i~H~Dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~---~~~~~  202 (289)
T 3og7_A          135 YLHAKSIIHRDLKSNNIFLHE---DNTVKIGDFGLATEKSRWSGS------HQFEQLSGSILWMAPEVIRMQ---DSNPY  202 (289)
T ss_dssp             HHHHTTCCCSCCCGGGEEEET---TTEEEECCCC------------------------CCCTTCCHHHHC-------CCS
T ss_pred             HHHhCCcccccCccceEEECC---CCCEEEccceecccccccccc------ccccccCCCccccCchhhccc---CCCCC
Confidence            346678999999999999953   457999999987533211110      012245689999999987521   13457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||.+
T Consensus       203 ~~~~Di~slG~il~el~~g~~p~~~  227 (289)
T 3og7_A          203 SFQSDVYAFGIVLYELMTGQLPYSN  227 (289)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             CcccchHHHHHHHHHHHHCCCCccc
Confidence            8899999999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.39  E-value=2.1e-13  Score=138.51  Aligned_cols=89  Identities=31%  Similarity=0.613  Sum_probs=70.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        ......|++.|+|||++..      ..+
T Consensus       156 ~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  218 (335)
T 2owb_A          156 YLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGE--------RKKVLCGTPNYIAPEVLSK------KGH  218 (335)
T ss_dssp             HHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECCSTTC--------CBCCCCSCCSSCCHHHHHT------SCB
T ss_pred             HHHHCCCEecCCCchhEEEc---CCCCEEEeeccCceecccCcc--------cccccCCCccccCHHHhcc------CCC
Confidence            45677999999999999994   456799999999754332211        1123568999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++|..||.+.
T Consensus       219 ~~~~Di~slG~il~~l~~g~~pf~~~  244 (335)
T 2owb_A          219 SFEVDVWSIGCIMYTLLVGKPPFETS  244 (335)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhHHHHHHHHHHHHHCcCCCCCC
Confidence            88999999999999999999999763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.39  E-value=1.5e-13  Score=135.19  Aligned_cols=89  Identities=34%  Similarity=0.587  Sum_probs=51.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++........        ......|++.|+|||++..      ..+
T Consensus       127 ~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~  189 (278)
T 3cok_A          127 YLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMPHE--------KHYTLCGTPNYISPEIATR------SAH  189 (278)
T ss_dssp             HHHHTTEECSSCCGGGEEEC---TTCCEEECCCTTCEECC----------------------------------------
T ss_pred             HHHHCCeecCCCCHHHEEEc---CCCCEEEEeecceeeccCCCC--------cceeccCCCCcCCcchhcC------CCC
Confidence            34566899999999999994   456799999998754322111        1124568999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||...
T Consensus       190 ~~~~Di~slG~il~~l~~g~~p~~~~  215 (278)
T 3cok_A          190 GLESDVWSLGCMFYTLLIGRPPFDTD  215 (278)
T ss_dssp             --CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCh
Confidence            78999999999999999999999754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=1.2e-13  Score=142.56  Aligned_cols=93  Identities=26%  Similarity=0.418  Sum_probs=61.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++...........    ......+++.|+|||++..      ..+
T Consensus       207 ~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~  273 (373)
T 3c1x_A          207 FLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVH----NKTGAKLPVKWMALESLQT------QKF  273 (373)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTCCEEECCC-------------------------CCGGGSCHHHHHH------CCC
T ss_pred             HHHHCCEecCccchheEEE---CCCCCEEEeecccccccccccccccc----ccCCCCCcccccChHHhcC------CCC
Confidence            3467799999999999999   44567999999998543221110000    1112356788999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |.+||.+.
T Consensus       274 ~~~~DvwSlG~il~ellt~~~~p~~~~  300 (373)
T 3c1x_A          274 TTKSDVWSFGVLLWELMTRGAPPYPDV  300 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             CcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence            899999999999999999 67777653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.38  E-value=2.6e-13  Score=134.11  Aligned_cols=87  Identities=31%  Similarity=0.589  Sum_probs=68.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++......          ......|++.|+|||++..      ..+
T Consensus       129 ~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~  189 (284)
T 2vgo_A          129 YCHERKVIHRDIKPENLLMG---YKGELKIADFGWSVHAPSL----------RRRTMCGTLDYLPPEMIEG------KTH  189 (284)
T ss_dssp             HHHTTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECSSS----------CBCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCceecCCCHHHEEEc---CCCCEEEecccccccCccc----------ccccccCCCCcCCHHHhcc------CCC
Confidence            44667999999999999994   4557999999987432211          1123568999999998753      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||...
T Consensus       190 ~~~~Di~slG~il~~l~~g~~pf~~~  215 (284)
T 2vgo_A          190 DEKVDLWCAGVLCYEFLVGMPPFDSP  215 (284)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CcccchhhHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.38  E-value=2.6e-13  Score=134.42  Aligned_cols=85  Identities=28%  Similarity=0.495  Sum_probs=66.8

Q ss_pred             cccCC--eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        122 ERHKR--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       122 ~~~~~--IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .|..+  |+||||||+||++..  ..+.+||+|||++......          ......|++.|+|||++.       ..
T Consensus       145 lH~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~~~~~~~~----------~~~~~~~t~~y~aPE~~~-------~~  205 (290)
T 1t4h_A          145 LHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS----------FAKAVIGTPEFMAPEMYE-------EK  205 (290)
T ss_dssp             HHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCTT----------SBEESCSSCCCCCGGGGG-------TC
T ss_pred             HHcCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCCccccccc----------ccccccCCcCcCCHHHHh-------cc
Confidence            45556  999999999999952  3457999999987432111          122456899999999874       34


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ++.++|+||+||++|+|++|..||.+
T Consensus       206 ~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          206 YDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            78899999999999999999999965

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=8.3e-14  Score=141.61  Aligned_cols=91  Identities=29%  Similarity=0.507  Sum_probs=69.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......|++.|+|||++..      ..+
T Consensus       187 ~LH~~~ivH~Dikp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  251 (344)
T 1rjb_A          187 FLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYV------VRGNARLPVKWMAPESLFE------GIY  251 (344)
T ss_dssp             HHHHTTEEETTCSGGGEEEE---TTTEEEECCCGGGSCGGGCTTSE------EETTEEECGGGCCHHHHHH------CCC
T ss_pred             HHHhCCcccCCCChhhEEEc---CCCcEEeCCCccCcccccCccce------eccCccCccCccCHHHhcc------CCC
Confidence            34778999999999999994   44579999999985433221110      1113356788999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       252 ~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          252 TIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            899999999999999998 99999764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.38  E-value=1.4e-13  Score=134.92  Aligned_cols=83  Identities=39%  Similarity=0.646  Sum_probs=61.4

Q ss_pred             eeeecCCCCCeeccCCC-----CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        127 IAHRDLKPENILCVHPD-----QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       127 IiHrDLK~enill~~~~-----~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      |+||||||+||++....     ..+.+||+|||++......          ......|++.|+|||.+..      ..++
T Consensus       129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~------~~~~  192 (271)
T 3dtc_A          129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT----------TKMSAAGAYAWMAPEVIRA------SMFS  192 (271)
T ss_dssp             CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----------------------CCGGGSCHHHHHH------CCCS
T ss_pred             eeecCCchHHEEEecccccccccCcceEEccCCcccccccc----------cccCCCCccceeCHHHhcc------CCCC
Confidence            89999999999996532     2567999999987533211          1123468999999998753      4578


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      .++|+||+||++|+|++|..||.+
T Consensus       193 ~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          193 KGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCC
Confidence            899999999999999999999976

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.38  E-value=1.6e-13  Score=138.63  Aligned_cols=99  Identities=28%  Similarity=0.509  Sum_probs=55.1

Q ss_pred             ccccCC--eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCC----CCCCCCccCCCCCCCcccccccccccC
Q psy16343        121 HERHKR--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS----PLATPLLLTPVGSAEFMAPEIVNAFMG  194 (539)
Q Consensus       121 ~~~~~~--IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~----~~~~~~l~~~~gt~~y~aPE~~~~~~~  194 (539)
                      +.|..+  |+||||||+||++.   ..+.+||+|||++...........    ...........|++.|+|||++...  
T Consensus       151 ~LH~~~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--  225 (337)
T 3ll6_A          151 HMHRQKPPIIHRDLKVENLLLS---NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY--  225 (337)
T ss_dssp             HHHTSSSCCBCCCCCGGGCEEC---TTSCEEBCCCTTCBCCSSCC-------------------------------CC--
T ss_pred             HHHhCCCCEEEccCCcccEEEC---CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc--
Confidence            345557  99999999999994   455799999999854432211100    0000011245689999999987422  


Q ss_pred             CCCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        195 PEASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       195 ~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                       ....++.++|||||||++|+|++|..||..
T Consensus       226 -~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          226 -SNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             -TTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             -ccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence             134578899999999999999999999964

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.38  E-value=1.1e-13  Score=137.01  Aligned_cols=91  Identities=33%  Similarity=0.597  Sum_probs=61.7

Q ss_pred             ccccC-CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~-~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|.. +|+||||||+||++   +..+.+||+|||++.......         ......|++.|+|||++....  ....
T Consensus       124 ~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~--~~~~  189 (290)
T 3fme_A          124 HLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDV---------AKDIDAGCKPYMAPERINPEL--NQKG  189 (290)
T ss_dssp             HHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC------------------------CCCCCCSCHHHHSCCT--TC--
T ss_pred             HHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCCcccccccc---------cccccCCCccccChhhcChhh--cCcC
Confidence            34555 89999999999999   445679999999875432211         111346899999999873211  2345


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ++.++|+||+||++|+|++|..||..
T Consensus       190 ~~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          190 YSVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccc
Confidence            78899999999999999999999965

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.37  E-value=9.5e-14  Score=147.19  Aligned_cols=90  Identities=27%  Similarity=0.446  Sum_probs=68.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++........       ......+++.|+|||++..      ..+
T Consensus       299 ~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  362 (454)
T 1qcf_A          299 FIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNEYT-------AREGAKFPIKWTAPEAINF------GSF  362 (454)
T ss_dssp             HHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGGBCCHHHH-------TTCSSSSCGGGSCHHHHHH------CCC
T ss_pred             HHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceEcCCCcee-------ccCCCcccccccCHHHhcc------CCC
Confidence            4567799999999999999   44567999999998643221100       0012245778999998853      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       363 ~~~~DvwslG~~l~el~t~g~~P~~~~  389 (454)
T 1qcf_A          363 TIKSDVWSFGILLMEIVTYGRIPYPGM  389 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999999 99999763

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.37  E-value=1.9e-13  Score=144.76  Aligned_cols=86  Identities=23%  Similarity=0.419  Sum_probs=67.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.....           .....+++.|+|||++..      ..+
T Consensus       304 ~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~-----------~~~~~~~~~y~aPE~~~~------~~~  363 (450)
T 1k9a_A          304 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST-----------QDTGKLPVKWTAPEALRE------KKF  363 (450)
T ss_dssp             HHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEECC-----------------CCCTTTSCHHHHHS------SCC
T ss_pred             HHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCccccccc-----------ccCCCCCcceeCHHHhcC------CCC
Confidence            3467799999999999999   44567999999998532211           112246788999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       364 ~~~sDvwslG~~l~el~t~g~~P~~~~  390 (450)
T 1k9a_A          364 STKSDVWSFGILLWEIYSFGRVPYPRI  390 (450)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999998 99999763

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.37  E-value=1.9e-13  Score=136.57  Aligned_cols=90  Identities=28%  Similarity=0.466  Sum_probs=68.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++..........      ......|++.|+|||.+..       .+
T Consensus       148 ~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~-------~~  211 (307)
T 2nru_A          148 FLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTV------MTSRIVGTTAYMAPEALRG-------EI  211 (307)
T ss_dssp             HHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCSCSSCE------ECSSCCSCGGGCCHHHHTT-------EE
T ss_pred             HHhcCCeecCCCCHHHEEE---cCCCcEEEeecccccccccccccc------cccccCCCcCcCChHHhcC-------CC
Confidence            3466799999999999999   455679999999875432211100      1123468999999998742       36


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++|..||.+.
T Consensus       212 ~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          212 TPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             CccchhHHHHHHHHHHHHCCCCcccC
Confidence            78999999999999999999999764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.37  E-value=1e-13  Score=138.78  Aligned_cols=91  Identities=26%  Similarity=0.393  Sum_probs=68.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       165 ~lH~~~ivH~dikp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  229 (314)
T 2ivs_A          165 YLAEMKLVHRDLAARNILVA---EGRKMKISDFGLSRDVYEEDSYV------KRSQGRIPVKWMAIESLFD------HIY  229 (314)
T ss_dssp             HHHHTTEECCCCSGGGEEEE---TTTEEEECCCTTCEECTTTSCEE------CSSCCCSCGGGCCHHHHHH------CEE
T ss_pred             HHHHCCCcccccchheEEEc---CCCCEEEccccccccccccccce------eccCCCCcccccChhhhcC------CCc
Confidence            45677999999999999995   44569999999875432221110      1123356788999998753      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       230 ~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          230 TTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            889999999999999999 99999764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.37  E-value=3.4e-13  Score=133.94  Aligned_cols=89  Identities=31%  Similarity=0.613  Sum_probs=69.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        ......|++.|+|||++..      ..+
T Consensus       130 ~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~  192 (294)
T 2rku_A          130 YLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGE--------RKKVLCGTPNYIAPEVLSK------KGH  192 (294)
T ss_dssp             HHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECCSTTC--------CBCCCCSCCSSCCHHHHTT------SCB
T ss_pred             HHHHCCccccCCChHhEEEc---CCCCEEEEeccCceecccCcc--------ccccccCCCCcCCcchhcc------CCC
Confidence            44667999999999999994   456799999998754332211        1123468999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       193 ~~~~Di~slG~~l~~l~~g~~p~~~~  218 (294)
T 2rku_A          193 SFEVDVWSIGCIMYTLLVGKPPFETS  218 (294)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            78999999999999999999999763

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.37  E-value=2.2e-13  Score=136.54  Aligned_cols=82  Identities=37%  Similarity=0.738  Sum_probs=60.8

Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      .+|+||||||+||++...+  ..+||+|||++......           .....|++.|+|||++.      ...++.++
T Consensus       124 ~~ivH~dlkp~NIll~~~~--~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~------~~~~~~~~  184 (307)
T 2eva_A          124 KALIHRDLKPPNLLLVAGG--TVLKICDFGTACDIQTH-----------MTNNKGSAAWMAPEVFE------GSNYSEKC  184 (307)
T ss_dssp             SCCCCCCCSGGGEEEETTT--TEEEECCCCC-----------------------CCTTSSCHHHHT------CCCCCTHH
T ss_pred             CCeecCCCChhHEEEeCCC--CEEEEcccccccccccc-----------cccCCCCCceEChhhhC------CCCCCcHH
Confidence            5899999999999995322  23799999987532211           11346899999999885      24688999


Q ss_pred             chhhhhHHHHHHHhCCCCCCC
Q psy16343        205 DLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      |||||||++|+|++|..||..
T Consensus       185 Di~slG~il~el~~g~~p~~~  205 (307)
T 2eva_A          185 DVFSWGIILWEVITRRKPFDE  205 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTT
T ss_pred             HHHHHHHHHHHHHHCCCCchh
Confidence            999999999999999999965

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.37  E-value=2.6e-13  Score=133.17  Aligned_cols=91  Identities=31%  Similarity=0.533  Sum_probs=68.1

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++.   ..+.++|+|||++..........      ......|++.|+|||++..     ...++
T Consensus       121 lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~-----~~~~~  186 (276)
T 2yex_A          121 LHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLKR-----REFHA  186 (276)
T ss_dssp             HHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECEETTEEC------CBCCCCSCGGGCCGGGGTC-----SSBCH
T ss_pred             HHhCCeeccCCChHHEEEc---cCCCEEEeeCCCccccCCCcchh------cccCCccccCccChHHHhc-----CCCCC
Confidence            4556899999999999994   45679999999875432211100      1224578999999998752     12246


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++|+||+||++|+|++|..||.+.
T Consensus       187 ~~~Di~slG~il~~l~~g~~p~~~~  211 (276)
T 2yex_A          187 EPVDVWSCGIVLTAMLAGELPWDQP  211 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred             CcchHHHHHHHHHHHHhCCCCCCCC
Confidence            7899999999999999999999764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.37  E-value=1.5e-13  Score=141.86  Aligned_cols=91  Identities=23%  Similarity=0.401  Sum_probs=59.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++..........     ......+++.|+|||++..      ..+
T Consensus       162 ~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  227 (373)
T 2qol_A          162 YLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAY-----TTRGGKIPIRWTSPEAIAY------RKF  227 (373)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTCCEEECCC---------------------------CTTSCHHHHHH------CCC
T ss_pred             HHHHCCeeCCCCCcceEEE---cCCCCEEECcCccccccccCCccce-----eccCCCcCCCccChhhhcc------CCc
Confidence            4467799999999999999   4556799999999854332211000     0112235678999998853      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|||||||++|+|++ |..||.+
T Consensus       228 ~~~~Dv~SlG~il~ellt~g~~P~~~  253 (373)
T 2qol_A          228 TSASDVWSYGIVLWEVMSYGERPYWE  253 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred             CchhcHHHHHHHHHHHHhCCCCCCCC
Confidence            899999999999999998 9999965

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.36  E-value=2e-13  Score=136.74  Aligned_cols=94  Identities=24%  Similarity=0.382  Sum_probs=68.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..  ....+||+|||++..........     .......++..|+|||.+..     ...+
T Consensus       135 ~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~-----~~~~  202 (320)
T 2i6l_A          135 YIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHK-----GHLSEGLVTKWYRSPRLLLS-----PNNY  202 (320)
T ss_dssp             HHHHTTCBCCCCSGGGEEEET--TTTEEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHC-----TTCC
T ss_pred             HHHhCCEecCCCCHHHEEEcC--CCCeEEEccCccccccCCCcccc-----cccccccccccccCcHHhcC-----cccC
Confidence            445669999999999999953  23569999999885432211110     01223467899999998742     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++|..||.+.
T Consensus       203 ~~~~Di~slG~il~el~~g~~pf~~~  228 (320)
T 2i6l_A          203 TKAIDMWAAGCIFAEMLTGKTLFAGA  228 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhhHhHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.36  E-value=1.3e-13  Score=138.97  Aligned_cols=88  Identities=31%  Similarity=0.498  Sum_probs=67.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..  ..+.+||+|||++......          ......|++.|+|||++..     ...+
T Consensus       164 ~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~Dfg~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~  226 (320)
T 3a99_A          164 HCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDT----------VYTDFDGTRVYSPPEWIRY-----HRYH  226 (320)
T ss_dssp             HHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEECCSS----------CBCCCCSCGGGSCHHHHHH-----SCBC
T ss_pred             HHHHCCcEeCCCCHHHEEEeC--CCCCEEEeeCccccccccc----------cccCCCCCccCCChHHhcc-----CCCC
Confidence            346779999999999999952  3456999999987543221          1223568999999998753     1234


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+|||||++|+|++|..||..
T Consensus       227 ~~~~Di~slG~il~el~~g~~pf~~  251 (320)
T 3a99_A          227 GRSAAVWSLGILLYDMVCGDIPFEH  251 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             CccchHHhHHHHHHHHHHCCCCCCC
Confidence            6789999999999999999999964

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.36  E-value=2.8e-13  Score=135.85  Aligned_cols=90  Identities=34%  Similarity=0.503  Sum_probs=61.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.........       ......|++.|+|||++..      ..+
T Consensus       149 ~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  212 (309)
T 2h34_A          149 AAHAAGATHRDVKPENILVS---ADDFAYLVDFGIASATTDEKLT-------QLGNTVGTLYYMAPERFSE------SHA  212 (309)
T ss_dssp             HHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC-----------------------CCGGGCCGGGTCC---------
T ss_pred             HHHHCcCCcCCCChHHEEEc---CCCCEEEecCccCccccccccc-------cccccCCCcCccCHHHHcC------CCC
Confidence            44666899999999999994   4467999999987543221110       1123468999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++|..||.+.
T Consensus       213 ~~~~Di~slG~il~~l~~g~~pf~~~  238 (309)
T 2h34_A          213 TYRADIYALTCVLYECLTGSPPYQGD  238 (309)
T ss_dssp             -CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred             CchHhHHHHHHHHHHHHHCCCCCCCc
Confidence            88999999999999999999999753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.36  E-value=1.1e-13  Score=140.54  Aligned_cols=91  Identities=27%  Similarity=0.466  Sum_probs=68.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       189 ~LH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  253 (343)
T 1luf_A          189 YLSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYK------ADGNDAIPIRWMPPESIFY------NRY  253 (343)
T ss_dssp             HHHHTTCCCSCCSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----------CCBCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCeecCCCCcceEEEC---CCCeEEEeecCCCcccccCcccc------ccCCCcccceecChhhhcc------CCc
Confidence            45778999999999999994   45679999999875332111100      1123457889999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++ |..||.+.
T Consensus       254 ~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          254 TTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            899999999999999999 99999763

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.36  E-value=1.8e-13  Score=134.00  Aligned_cols=89  Identities=24%  Similarity=0.404  Sum_probs=67.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++.........       ......+++.|+|||.+..      ..+
T Consensus       119 ~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  182 (268)
T 3sxs_A          119 FLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDDQYV-------SSVGTKFPVKWSAPEVFHY------FKY  182 (268)
T ss_dssp             HHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCTTCEE-------ECCSCCCCGGGCCHHHHHH------SEE
T ss_pred             HHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecchhhhh-------cccCCCcCcccCCHHHHhc------cCC
Confidence            3466799999999999999   45567999999987543222111       1112346678999998853      347


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|+||+||++|+|++ |..||..
T Consensus       183 ~~~~Di~slG~il~~l~~~g~~p~~~  208 (268)
T 3sxs_A          183 SSKSDVWAFGILMWEVFSLGKMPYDL  208 (268)
T ss_dssp             ETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             chhhhhHHHHHHHHHHHcCCCCCccc
Confidence            789999999999999999 9999965

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.36  E-value=3.3e-13  Score=133.06  Aligned_cols=91  Identities=43%  Similarity=0.711  Sum_probs=68.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCC-CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~-~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|..+|+||||||+||++...+ ....++|+|||++.......         ......|++.|+|||++.      ...
T Consensus       123 ~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~------~~~  187 (283)
T 3bhy_A          123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---------EFKNIFGTPEFVAPEIVN------YEP  187 (283)
T ss_dssp             HHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----------------CCCGGGCCHHHHT------TCC
T ss_pred             HHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC---------cccccCCCcCccCcceec------CCC
Confidence            44667999999999999996543 23479999999875432211         112346899999999875      245


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++|+||+||++|+|++|..||.+.
T Consensus       188 ~~~~~Di~slG~il~~l~~g~~p~~~~  214 (283)
T 3bhy_A          188 LGLEADMWSIGVITYILLSGASPFLGE  214 (283)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence            788999999999999999999999763

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.36  E-value=1.2e-13  Score=137.15  Aligned_cols=91  Identities=29%  Similarity=0.369  Sum_probs=65.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........     ......++..|+|||.+..      ..+
T Consensus       129 ~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  194 (295)
T 3ugc_A          129 YLGTKRYIHRDLATRNILVE---NENRVKIGDFGLTKVLPQDKEFFK-----VKEPGESPIFWYAPESLTE------SKF  194 (295)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCSCC------------------CTTCGGGGCCHHHHHH------CCC
T ss_pred             HHhcCCcccCCCCHhhEEEc---CCCeEEEccCcccccccCCcceee-----eccCCCCccceeCcHHhcC------CCC
Confidence            34667999999999999995   345699999999854332211100     1112346678999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||..
T Consensus       195 ~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          195 SVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             ChHHHHHHHHHHHHHHHhcccccCC
Confidence            8999999999999999999998854

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.36  E-value=1.8e-13  Score=136.84  Aligned_cols=91  Identities=31%  Similarity=0.495  Sum_probs=69.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       160 ~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  224 (313)
T 1t46_A          160 FLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYV------VKGNARLPVKWMAPESIFN------CVY  224 (313)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---TTTEEEECCCGGGSCTTSCTTSE------ECSSSEECGGGCCHHHHHH------CCC
T ss_pred             HHHHCCeecCCCccceEEEc---CCCCEEEccccccccccccccce------eccCCCCcceeeChHHhcC------CCC
Confidence            44667999999999999994   44569999999875433221110      1113456788999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++||||+||++|+|++ |..||.+.
T Consensus       225 ~~~~Di~slG~il~ellt~g~~p~~~~  251 (313)
T 1t46_A          225 TFESDVWSYGIFLWELFSLGSSPYPGM  251 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence            899999999999999999 99999764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.36  E-value=1.3e-13  Score=135.14  Aligned_cols=90  Identities=22%  Similarity=0.394  Sum_probs=68.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++.........       ......+++.|+|||++..      ..+
T Consensus       121 ~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  184 (269)
T 4hcu_A          121 YLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVKWASPEVFSF------SRY  184 (269)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGGGBCCHHHH-------STTSTTCCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCeecCCcchheEEE---cCCCCEEeccccccccccccccc-------cccCcccccccCCHHHhcC------CCC
Confidence            4466789999999999999   44467999999987543221100       1113356778999998853      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       185 ~~~~Di~slG~~l~~ll~~g~~p~~~~  211 (269)
T 4hcu_A          185 SSKSDVWSFGVLMWEVFSEGKIPYENR  211 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence            889999999999999999 99999753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.35  E-value=3.2e-13  Score=134.14  Aligned_cols=93  Identities=41%  Similarity=0.735  Sum_probs=70.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.......         ......|++.|+|||++..........+
T Consensus       139 ~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~  206 (298)
T 1phk_A          139 ALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGY  206 (298)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCB
T ss_pred             HHHHCCcccCCCCcceEEE---cCCCcEEEecccchhhcCCCc---------ccccccCCccccCHHHhccccccccccC
Confidence            3466799999999999999   445679999999875433211         1224568999999998753222223457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       207 ~~~~Di~slG~~l~~l~~g~~p~~~  231 (298)
T 1phk_A          207 GKEVDMWSTGVIMYTLLAGSPPFWH  231 (298)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CcccccHhHHHHHHHHHHCCCCCcC
Confidence            8899999999999999999999965

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.35  E-value=1.3e-13  Score=138.05  Aligned_cols=91  Identities=30%  Similarity=0.501  Sum_probs=68.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......|++.|+|||++..      ..+
T Consensus       163 ~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~t~~y~aPE~~~~------~~~  227 (316)
T 2xir_A          163 FLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYV------RKGDARLPLKWMAPETIFD------RVY  227 (316)
T ss_dssp             HHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTTCTTSE------EETTEEECGGGCCHHHHHH------CCC
T ss_pred             HHHhCCcccccCccceEEEC---CCCCEEECCCccccccccCccce------eccCCCcceeecCchhhcc------ccc
Confidence            34667999999999999994   45679999999875432211100      1113457889999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       228 ~~~~Di~slG~il~~l~t~g~~p~~~~  254 (316)
T 2xir_A          228 TIQSDVWSFGVLLWEIFSLGASPYPGV  254 (316)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cchhHHHHHHHHHHHHHhCCCCCCccc
Confidence            899999999999999998 99999763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.35  E-value=3.7e-13  Score=134.28  Aligned_cols=88  Identities=34%  Similarity=0.551  Sum_probs=69.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++........        ......|++.|+|||++..      ..+
T Consensus       134 ~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~  196 (303)
T 3a7i_A          134 YLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI--------KRNTFVGTPFWMAPEVIKQ------SAY  196 (303)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECBTTBC--------CBCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHHCCCccCCCChheEEEC---CCCCEEEeecccceecCcccc--------ccCccCCCcCccCHHHHhc------CCC
Confidence            34667999999999999994   456799999998754322111        1124568999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+|||||++|+|++|..||..
T Consensus       197 ~~~~Di~slG~il~~l~~g~~p~~~  221 (303)
T 3a7i_A          197 DSKADIWSLGITAIELARGEPPHSE  221 (303)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CchhhhHHHHHHHHHHccCCCCCCC
Confidence            8899999999999999999999965

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.35  E-value=1.9e-13  Score=137.50  Aligned_cols=90  Identities=23%  Similarity=0.376  Sum_probs=68.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       153 ~lH~~~i~H~dikp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  217 (322)
T 1p4o_A          153 YLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKD------GVF  217 (322)
T ss_dssp             HHHHTTCBCSCCSGGGEEEC---TTCCEEECCTTCCCGGGGGGCEE------GGGSSEECGGGCCHHHHHH------CCC
T ss_pred             HHHHCCCccCCCccceEEEc---CCCeEEECcCccccccccccccc------cccCCCCCCCccChhhhcc------CCC
Confidence            45677999999999999994   45679999999875432211100      1123456889999998753      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|+||+||++|+|++ |..||.+
T Consensus       218 ~~~~Di~slG~il~el~~~g~~p~~~  243 (322)
T 1p4o_A          218 TTYSDVWSFGVVLWEIATLAEQPYQG  243 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             CchhhHHHHHHHHHHHHhcCCCcccc
Confidence            889999999999999999 8899865

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.35  E-value=1.6e-13  Score=135.40  Aligned_cols=89  Identities=27%  Similarity=0.395  Sum_probs=66.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..   .+.+||+|||++.........       ......+++.|+|||++..      ..+
T Consensus       128 ~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  191 (281)
T 3cc6_A          128 YLESINCVHRDIAVRNILVAS---PECVKLGDFGLSRYIEDEDYY-------KASVTRLPIKWMSPESINF------RRF  191 (281)
T ss_dssp             HHHHTTCCCCCCSGGGEEEEE---TTEEEECCCCGGGCC----------------CCCCCGGGCCHHHHHH------CCC
T ss_pred             HHHHCCcccCCCccceEEECC---CCcEEeCccCCCccccccccc-------ccccCCCCcceeCchhhcc------CCC
Confidence            446679999999999999953   456999999987543221110       0112346788999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|+||+||++|+|++ |..||..
T Consensus       192 ~~~~Di~slG~il~~llt~g~~p~~~  217 (281)
T 3cc6_A          192 TTASDVWMFAVCMWEILSFGKQPFFW  217 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CchhccHHHHHHHHHHHhCCCCCccc
Confidence            889999999999999998 9999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.35  E-value=7.9e-14  Score=145.07  Aligned_cols=96  Identities=31%  Similarity=0.531  Sum_probs=69.8

Q ss_pred             ccccCCeeeecCCCCCeeccC-CCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC--CC
Q psy16343        121 HERHKRIAHRDLKPENILCVH-PDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP--EA  197 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~-~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~--~~  197 (539)
                      +.|..+|+||||||+||++.. .+....+||+|||++.......         ......||+.|+|||++......  ..
T Consensus       127 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~  197 (396)
T 4eut_A          127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQ  197 (396)
T ss_dssp             HHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG---------GSSCSSSCCTTCCHHHHHHHCC--CHH
T ss_pred             HHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC---------ccccccCCccccCHHHhhccccccccc
Confidence            346669999999999999743 3445569999999985433221         12245799999999987531100  01


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ..++.++|||||||++|+|++|..||..
T Consensus       198 ~~~~~~~DiwSlG~il~el~tg~~Pf~~  225 (396)
T 4eut_A          198 KKYGATVDLWSIGVTFYHAATGSLPFRP  225 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred             cCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            3466789999999999999999999975

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.35  E-value=1.7e-13  Score=150.67  Aligned_cols=92  Identities=27%  Similarity=0.432  Sum_probs=66.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||+++.+........     ......+++.|+|||++..      ..+
T Consensus       451 ~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGla~~~~~~~~~~~-----~~~~~~~~~~y~APE~~~~------~~~  516 (613)
T 2ozo_A          451 YLEEKNFVHRNLAARNVLLV---NRHYAKISDFGLSKALGADDSYYT-----ARSAGKWPLKWYAPECINF------RKF  516 (613)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---ETTEEEECCCSTTTTCC-------------------CCTTSCHHHHHH------CCC
T ss_pred             HHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccCcccccCCCceee-----eccCCCCccceeCHhhhcC------CCC
Confidence            34677999999999999995   445799999999865432211100     0112235678999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       517 ~~~sDvwSlGv~l~ellt~G~~Pf~~~  543 (613)
T 2ozo_A          517 SSRSDVWSYGVTMWEALSYGQKPYKKM  543 (613)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            899999999999999998 99999763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.35  E-value=2.6e-13  Score=136.05  Aligned_cols=91  Identities=22%  Similarity=0.345  Sum_probs=64.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||.+..      ..+
T Consensus       162 ~LH~~~ivH~dikp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  226 (313)
T 3brb_A          162 YLSNRNFLHRDLAARNCMLR---DDMTVCVADFGLSKKIYSGDYYR------QGRIAKMPVKWIAIESLAD------RVY  226 (313)
T ss_dssp             HHHTTTCCCCCCSGGGEEEC---TTSCEEECSCSCC----------------------CCGGGSCHHHHHS------SCC
T ss_pred             HHHhCCcccCCCCcceEEEc---CCCcEEEeecCcceecccccccC------cccccCCCccccCchhhcC------CCc
Confidence            34677999999999999994   45679999999875432221110      1112346788999998853      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++ |..||.+.
T Consensus       227 ~~~~Di~slG~il~el~~~g~~p~~~~  253 (313)
T 3brb_A          227 TSKSDVWAFGVTMWEIATRGMTPYPGV  253 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            889999999999999999 88998763

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.35  E-value=3.2e-13  Score=134.23  Aligned_cols=92  Identities=25%  Similarity=0.405  Sum_probs=66.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++...........    .......+++.|+|||.+..      ..+
T Consensus       143 ~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~  209 (298)
T 3f66_A          143 YLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSV----HNKTGAKLPVKWMALESLQT------QKF  209 (298)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGGCCCSCGGGCBC---------CCBCGGGSCHHHHHH------CCC
T ss_pred             HHHhCCccCCCCchheEEE---CCCCCEEECcccccccccccchhcc----ccccCCCCCccccChHHhcC------CCC
Confidence            3466799999999999999   4556799999999854332211100    01123457789999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhC-CCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCG-YPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG-~~Pf~~  225 (539)
                      +.++|+||+||++|+|++| .+||.+
T Consensus       210 ~~~~Di~slG~il~~l~~~~~~~~~~  235 (298)
T 3f66_A          210 TTKSDVWSFGVLLWELMTRGAPPYPD  235 (298)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            8899999999999999995 556654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.35  E-value=2.4e-13  Score=133.94  Aligned_cols=87  Identities=20%  Similarity=0.237  Sum_probs=65.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCC----------------CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcc
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM  184 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~----------------~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~  184 (539)
                      +.|..+|+||||||+||++...+                ....+||+|||++......            ....|++.|+
T Consensus       130 ~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------~~~~gt~~y~  197 (289)
T 1x8b_A          130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------------QVEEGDSRFL  197 (289)
T ss_dssp             HHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS------------CCCCCCGGGC
T ss_pred             HHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc------------cccCCCcccc
Confidence            45667999999999999997543                4557999999987543211            1235899999


Q ss_pred             cccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCC
Q psy16343        185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       185 aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      |||++..     ...++.++||||+||++|+|++|.+++.
T Consensus       198 aPE~~~~-----~~~~~~~~Di~slG~il~~l~~~~~~~~  232 (289)
T 1x8b_A          198 ANEVLQE-----NYTHLPKADIFALALTVVCAAGAEPLPR  232 (289)
T ss_dssp             CHHHHTT-----CCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred             ChhHhcC-----CCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence            9998852     2345679999999999999999987764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=4.2e-13  Score=133.19  Aligned_cols=91  Identities=25%  Similarity=0.370  Sum_probs=67.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++...........    .......+++.|+|||.+..      ..+
T Consensus       139 ~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~  205 (298)
T 3pls_A          139 YLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSV----QQHRHARLPVKWTALESLQT------YRF  205 (298)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTTTTGGGGCS----CCSSCTTCGGGGSCHHHHTT------CCC
T ss_pred             HHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCcccccCCccccc----ccCcCCCCCccccChhhhcc------CCC
Confidence            4467799999999999999   4556799999999854322211100    01123457889999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      +.++|+||+||++|+|++|..|+.
T Consensus       206 ~~~~Di~slG~il~~l~~g~~~~~  229 (298)
T 3pls_A          206 TTKSDVWSFGVLLWELLTRGAPPY  229 (298)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred             ChhhchhhHHHHHHHHhhCCCCCC
Confidence            889999999999999999665554

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.35  E-value=4.6e-13  Score=134.16  Aligned_cols=88  Identities=32%  Similarity=0.522  Sum_probs=69.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+|+||||+||++.   ..+.++|+|||++........        ......|++.|+|||++..      ..+
T Consensus       140 ~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~  202 (314)
T 3com_A          140 YLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLTDTMA--------KRNTVIGTPFWMAPEVIQE------IGY  202 (314)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECBTTBS--------CBCCCCSCGGGCCHHHHSS------SCB
T ss_pred             HHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccchhhhhhcc--------ccCccCCCCCccChhhcCC------CCC
Confidence            34677999999999999994   446799999998754322111        1124468999999998753      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||..
T Consensus       203 ~~~~Di~slG~il~~l~~g~~p~~~  227 (314)
T 3com_A          203 NCVADIWSLGITAIEMAEGKPPYAD  227 (314)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCC
Confidence            8899999999999999999999965

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.35  E-value=1.2e-13  Score=142.72  Aligned_cols=90  Identities=23%  Similarity=0.364  Sum_probs=66.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.........      ......+++.|+|||.+..      ..+
T Consensus       228 ~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  292 (377)
T 3cbl_A          228 YLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGVYAA------SGGLRQVPVKWTAPEALNY------GRY  292 (377)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTTSEEEC------CSSCCEEEGGGSCHHHHHH------CEE
T ss_pred             HHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCCCceee------cCCCCCCCcCcCCHhHhcc------CCC
Confidence            3477899999999999999   445679999999975422111000      0001224567999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|||||||++|+|++ |..||.+
T Consensus       293 ~~~~DvwslG~il~el~t~g~~p~~~  318 (377)
T 3cbl_A          293 SSESDVWSFGILLWETFSLGASPYPN  318 (377)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            889999999999999998 9999976

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.35  E-value=1.8e-13  Score=135.07  Aligned_cols=89  Identities=24%  Similarity=0.419  Sum_probs=68.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++.........       ......+++.|+|||++..      ..+
T Consensus       135 ~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  198 (283)
T 3gen_A          135 YLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMY------SKF  198 (283)
T ss_dssp             HHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCCHHHH-------STTSTTSCGGGCCHHHHHH------CCC
T ss_pred             HHHHCCccCCCCccceEEE---cCCCCEEEccccccccccccccc-------cccCCccCcccCCHHHhcc------CCC
Confidence            3467799999999999999   44567999999987543211100       1113346788999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|+||+||++|+|++ |..||.+
T Consensus       199 ~~~~Dv~slG~~l~~l~t~g~~p~~~  224 (283)
T 3gen_A          199 SSKSDIWAFGVLMWEIYSLGKMPYER  224 (283)
T ss_dssp             SHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCccc
Confidence            889999999999999998 9999975

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.35  E-value=1.5e-13  Score=138.90  Aligned_cols=94  Identities=22%  Similarity=0.390  Sum_probs=70.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++..........      ......|++.|+|||++..      ..+
T Consensus       155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  222 (327)
T 2yfx_A          155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR------KGGCAMLPVKWMPPEAFME------GIF  222 (327)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHH------CCC
T ss_pred             HHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccc------cCCCcCCCcceeCHhHhcC------CCC
Confidence            4466799999999999999766666779999999874322111100      1123457889999998753      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       223 ~~~~Di~slG~il~ellt~g~~p~~~~  249 (327)
T 2yfx_A          223 TSKTDTWSFGVLLWEIFSLGYMPYPSK  249 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence            889999999999999998 99999753

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.34  E-value=1.1e-13  Score=152.86  Aligned_cols=92  Identities=25%  Similarity=0.462  Sum_probs=66.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||+++.+........     ......+++.|+|||++..      ..+
T Consensus       484 yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~-----~~~~~~~t~~y~APE~~~~------~~~  549 (635)
T 4fl3_A          484 YLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYK-----AQTHGKWPVKWYAPECINY------YKF  549 (635)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---ETTEEEECCTTHHHHTTC------------------CGGGSCHHHHHH------CCC
T ss_pred             HHHHCCEeCCCCChHhEEEe---CCCCEEEEEcCCccccccCccccc-----cccCCCCceeeeChhhhcC------CCC
Confidence            34778999999999999995   445799999999864432221110     1112346788999999853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       550 ~~~sDvwSlGv~l~ellt~G~~Pf~~~  576 (635)
T 4fl3_A          550 SSKSDVWSFGVLMWEAFSYGQKPYRGM  576 (635)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999998 99999764

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.34  E-value=3.3e-13  Score=135.97  Aligned_cols=93  Identities=31%  Similarity=0.551  Sum_probs=63.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        ......|++.|+|||++.... .....+
T Consensus       144 ~lH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~-~~~~~~  211 (326)
T 2x7f_A          144 HLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIACDE-NPDATY  211 (326)
T ss_dssp             HHHHTTCCCCCCSGGGEEEC---TTCCEEECCCTTTC---------------------CCGGGCCHHHHC---------C
T ss_pred             HHHHCCccccCCcHHHEEEc---CCCCEEEeeCcCceecCcCcc--------ccccccCCccccChhhhcccc-ccCcCC
Confidence            34667999999999999994   456799999998754321110        112346899999999875211 113457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||.+
T Consensus       212 ~~~~Di~slG~il~~l~~g~~p~~~  236 (326)
T 2x7f_A          212 DFKSDLWSLGITAIEMAEGAPPLCD  236 (326)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCC
Confidence            8899999999999999999999965

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.34  E-value=1.5e-13  Score=140.82  Aligned_cols=86  Identities=33%  Similarity=0.605  Sum_probs=66.6

Q ss_pred             cccC-CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        122 ERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       122 ~~~~-~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .|.. +|+||||||+||++.   ..+.++|+|||++......          ......|++.|+|||++..      ..+
T Consensus       147 lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~----------~~~~~~gt~~y~aPE~~~~------~~~  207 (360)
T 3eqc_A          147 LREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDS----------MANSFVGTRSYMSPERLQG------THY  207 (360)
T ss_dssp             HHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCHHHHHH----------C----CCCCTTCCHHHHTT------CCC
T ss_pred             HHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCCcccccc----------cccCCCCCCCeECHHHHcC------CCC
Confidence            3443 799999999999994   4567999999987432111          1123478999999998853      468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||...
T Consensus       208 ~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          208 SVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             SHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.34  E-value=1.4e-13  Score=139.33  Aligned_cols=91  Identities=25%  Similarity=0.430  Sum_probs=68.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       179 ~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  243 (333)
T 2i1m_A          179 FLASKNCIHRDVAARNVLLT---NGHVAKIGDFGLARDIMNDSNYI------VKGNARLPVKWMAPESIFD------CVY  243 (333)
T ss_dssp             HHHHTTEECSCCSGGGCEEE---GGGEEEBCCCGGGCCGGGCTTSE------ECSSCEECGGGSCHHHHHH------CCC
T ss_pred             HHhcCCcccCCcccceEEEC---CCCeEEECcccccccccccccee------ecCCCCCCccccCHHHhcc------CCC
Confidence            45677999999999999994   44569999999985432221110      1113356788999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       244 ~~~~Di~slG~il~el~t~g~~p~~~~  270 (333)
T 2i1m_A          244 TVQSDVWSYGILLWEIFSLGLNPYPGI  270 (333)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence            899999999999999998 89999763

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.34  E-value=2.1e-13  Score=134.98  Aligned_cols=92  Identities=28%  Similarity=0.441  Sum_probs=68.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++...........     ......+++.|+|||++..      ..+
T Consensus       125 ~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  190 (287)
T 1u59_A          125 YLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSYYT-----ARSAGKWPLKWYAPECINF------RKF  190 (287)
T ss_dssp             HHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEECTTCSCEEC-----CCCSSCCCGGGCCHHHHHH------CEE
T ss_pred             HHHHCCEeeCCCchheEEEc---CCCCEEECcccceeeeccCcceee-----ccccccccccccCHHHhcc------CCC
Confidence            34566899999999999995   445799999998754432211110     1123356789999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       191 ~~~~Di~slG~il~ellt~g~~p~~~~  217 (287)
T 1u59_A          191 SSRSDVWSYGVTMWEALSYGQKPYKKM  217 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            889999999999999998 99999763

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.34  E-value=3.9e-13  Score=134.04  Aligned_cols=93  Identities=28%  Similarity=0.468  Sum_probs=68.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++.........      .......|++.|+|||++...    ...+
T Consensus       124 ~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~----~~~~  190 (305)
T 2wtk_C          124 YLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAEALHPFAAD------DTCRTSQGSPAFQPPEIANGL----DTFS  190 (305)
T ss_dssp             HHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEECCTTCSS------CEECCCCSCGGGCCHHHHTCC----SCEE
T ss_pred             HHHHCCeeecCCCcccEEEc---CCCcEEeeccccccccCccccc------cccccCCCCCCCcChhhccCc----ccCC
Confidence            44666999999999999994   4567999999987543211110      012245689999999987531    1224


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       191 ~~~~Di~slG~il~~l~~g~~p~~~~  216 (305)
T 2wtk_C          191 GFKVDIWSAGVTLYNITTGLYPFEGD  216 (305)
T ss_dssp             SHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            67899999999999999999999753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.33  E-value=3.1e-13  Score=137.03  Aligned_cols=91  Identities=26%  Similarity=0.445  Sum_probs=68.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++..........      ......+++.|+|||++..      ..+
T Consensus       172 ~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  236 (334)
T 2pvf_A          172 YLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNIDYYK------KTTNGRLPVKWMAPEALFD------RVY  236 (334)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECTTTSSEE------CCSCCCCCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCeeCCCCccceEEE---cCCCCEEEcccccccccccccccc------ccCCCCcccceeChHHhcC------CCc
Confidence            3466799999999999999   445679999999875432211100      1112356788999998753      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++||||+||++|+|++ |..||.+.
T Consensus       237 ~~~~Di~slG~il~ellt~g~~p~~~~  263 (334)
T 2pvf_A          237 THQSDVWSFGVLMWEIFTLGGSPYPGI  263 (334)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence            889999999999999999 99999763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.33  E-value=2.1e-13  Score=146.10  Aligned_cols=90  Identities=24%  Similarity=0.407  Sum_probs=68.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++........       ......+++.|+|||++..      ..+
T Consensus       333 ~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  396 (495)
T 1opk_A          333 YLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMTGDTYT-------AHAGAKFPIKWTAPESLAY------NKF  396 (495)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEECCTTCCEE-------CCTTCCCCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCcccCCCChhhEEE---CCCCcEEEeecccceeccCCcee-------ecCCCcCCcceeCHhHHhc------CCC
Confidence            4467799999999999999   44567999999998643221111       0112345678999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       397 ~~~sDvwSlG~~l~el~t~g~~p~~~~  423 (495)
T 1opk_A          397 SIKSDVWAFGVLLWEIATYGMSPYPGI  423 (495)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence            889999999999999999 99999763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.33  E-value=3.5e-13  Score=136.68  Aligned_cols=91  Identities=23%  Similarity=0.388  Sum_probs=63.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........     ......+++.|+|||++..      ..+
T Consensus       162 ~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  227 (333)
T 1mqb_A          162 YLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLEDDPEATY-----TTSGGKIPIRWTAPEAISY------RKF  227 (333)
T ss_dssp             HHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC----------------------CCCGGGSCHHHHHS------CCC
T ss_pred             HHHhCCeeCCCCChheEEEC---CCCcEEECCCCcchhhcccccccc-----ccCCCCccccccCchhccc------CCC
Confidence            34677999999999999994   456799999998754332111000     1112345778999998852      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~  225 (539)
                      +.++|||||||++|+|++ |..||.+
T Consensus       228 ~~~~Di~slG~il~ellt~g~~pf~~  253 (333)
T 1mqb_A          228 TSASDVWSFGIVMWEVMTYGERPYWE  253 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCccc
Confidence            889999999999999999 9999965

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.33  E-value=3.7e-13  Score=132.54  Aligned_cols=86  Identities=23%  Similarity=0.414  Sum_probs=63.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++......           .....+++.|+|||++..      ..+
T Consensus       132 ~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~------~~~  191 (278)
T 1byg_A          132 YLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASST-----------QDTGKLPVKWTAPEALRE------KKF  191 (278)
T ss_dssp             HHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC-----------------------CCTTTSCHHHHHH------CCC
T ss_pred             HHHhCCccccCCCcceEEEe---CCCcEEEeecccccccccc-----------ccCCCccccccCHHHhCC------CCC
Confidence            44667999999999999994   4567999999987532211           112356789999998753      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||...
T Consensus       192 ~~~~Di~slG~il~~l~t~g~~p~~~~  218 (278)
T 1byg_A          192 STKSDVWSFGILLWEIYSFGRVPYPRI  218 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             CchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            889999999999999998 99999753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.33  E-value=2.4e-13  Score=137.30  Aligned_cols=88  Identities=31%  Similarity=0.456  Sum_probs=66.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.......         ......+++.|+|||++..      ..+
T Consensus       157 ~LH~~~ivH~dlkp~NIl~~---~~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~  218 (327)
T 1fvr_A          157 YLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNY------SVY  218 (327)
T ss_dssp             HHHHTTEECSCCSGGGEEEC---GGGCEEECCTTCEESSCEEC---------CC----CCTTTCCHHHHHH------CEE
T ss_pred             HHHhCCccCCCCccceEEEc---CCCeEEEcccCcCccccccc---------cccCCCCCccccChhhhcc------ccC
Confidence            44677999999999999994   45579999999875322111         1112346788999998753      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       219 ~~~~Di~slG~il~ellt~g~~pf~~~  245 (327)
T 1fvr_A          219 TTNSDVWSYGVLLWEIVSLGGTPYCGM  245 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CchhcchHHHHHHHHHHcCCCCCCCCC
Confidence            889999999999999998 99999763

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.33  E-value=3.8e-13  Score=132.38  Aligned_cols=90  Identities=27%  Similarity=0.437  Sum_probs=68.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.........       ......+++.|+|||++..      ..+
T Consensus       124 ~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  187 (279)
T 1qpc_A          124 FIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYT-------AREGAKFPIKWTAPEAINY------GTF  187 (279)
T ss_dssp             HHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEECSSSCEE-------CCTTCCCCTTTSCHHHHHH------CEE
T ss_pred             HHHHCCeeccCCCHhhEEEc---CCCCEEECCCcccccccCcccc-------cccCCCCccCccChhhhcc------CCC
Confidence            34667999999999999994   4567999999987543322111       1112346788999998853      357


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       188 ~~~~Di~slG~il~el~~~g~~p~~~~  214 (279)
T 1qpc_A          188 TIKSDVWSFGILLTEIVTHGRIPYPGM  214 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCccc
Confidence            789999999999999999 89999763

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.33  E-value=2.7e-13  Score=143.65  Aligned_cols=90  Identities=27%  Similarity=0.362  Sum_probs=65.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.+||+|||+++........       ......++..|+|||.+..      ..+
T Consensus       295 ~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  358 (452)
T 1fmk_A          295 YVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY------GRF  358 (452)
T ss_dssp             HHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC---------------------CCGGGSCHHHHHH------CCC
T ss_pred             HHHhCCeeCCCCChhhEEEC---CCCCEEECCCccceecCCCcee-------cccCCcccccccCHhHHhc------CCC
Confidence            34677999999999999994   4567999999998643321110       0112346778999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       359 ~~~sDvwslG~~l~el~t~g~~P~~~~  385 (452)
T 1fmk_A          359 TIKSDVWSFGILLTELTTKGRVPYPGM  385 (452)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CccccHHhHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999999 99999763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.33  E-value=6.9e-13  Score=133.10  Aligned_cols=99  Identities=26%  Similarity=0.294  Sum_probs=67.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC---CC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP---EA  197 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~---~~  197 (539)
                      +.|..+|+||||||+||++.    .+.++|+|||++..........   .........|++.|+|||++......   ..
T Consensus       145 ~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~  217 (319)
T 2y4i_B          145 YLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSISGVLQAGR---REDKLRIQNGWLCHLAPEIIRQLSPDTEEDK  217 (319)
T ss_dssp             HHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCC
T ss_pred             HHHhCCccccCCChhhEEEe----CCCEEEeecCCccccccccccc---cccccccCCCcccccChHHhhhccccccccc
Confidence            34677999999999999995    3579999999864322111100   00122244688999999988642111   12


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ..++.++|||||||++|+|++|..||.+.
T Consensus       218 ~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          218 LPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            35788999999999999999999999753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.33  E-value=3.7e-13  Score=133.22  Aligned_cols=90  Identities=44%  Similarity=0.865  Sum_probs=70.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         ......|++.|+|||++.       ..+
T Consensus       136 ~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~-------~~~  199 (287)
T 2wei_A          136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLR-------GTY  199 (287)
T ss_dssp             HHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS---------SCSCHHHHHTTCCHHHHT-------TCC
T ss_pred             HHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC---------ccccccCcccccChHHhc-------CCC
Confidence            3466799999999999999766666789999999875432211         112345788999999874       247


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       200 ~~~~Di~slG~~l~~l~~g~~p~~~~  225 (287)
T 2wei_A          200 DEKCDVWSAGVILYILLSGTPPFYGK  225 (287)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCchhhHhHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999763

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.33  E-value=3.8e-13  Score=134.88  Aligned_cols=95  Identities=31%  Similarity=0.575  Sum_probs=65.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC-----
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP-----  195 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~-----  195 (539)
                      +.|..+|+||||||+||++..    +.+||+|||++..........      ......|++.|+|||++......     
T Consensus       142 ~LH~~~ivH~dlkp~NIl~~~----~~~kL~Dfg~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~  211 (313)
T 3cek_A          142 TIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSV------VKDSQVGTVNYMPPEAIKDMSSSRENGK  211 (313)
T ss_dssp             HHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCC--------------------CCGGGCCHHHHTTCC-------
T ss_pred             HHHHCCceecCCCcccEEEEC----CeEEEeeccccccccCccccc------cccCCCCCCCcCCHHHHhhccccccccc
Confidence            346679999999999999942    569999999985433221110      11234689999999987532110     


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ....++.++|||||||++|+|++|..||..
T Consensus       212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (313)
T 3cek_A          212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ  241 (313)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence            123578899999999999999999999965

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.32  E-value=3.4e-13  Score=132.81  Aligned_cols=86  Identities=31%  Similarity=0.521  Sum_probs=67.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.......         ......|++.|+|||++..      ..+
T Consensus       137 ~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~------~~~  198 (284)
T 2a19_B          137 YIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISS------QDY  198 (284)
T ss_dssp             HHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHC------SCC
T ss_pred             HHHhCCeeeccCCHHHEEEc---CCCCEEECcchhheeccccc---------cccccCCcccccChhhhcc------CCC
Confidence            44667999999999999995   34569999999875433221         1123468999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      +.++|+|||||++|+|++|..||.
T Consensus       199 ~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          199 GKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             CTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             cchhhhHHHHHHHHHHHhcCCcch
Confidence            889999999999999999988764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.32  E-value=2.9e-13  Score=136.68  Aligned_cols=91  Identities=36%  Similarity=0.666  Sum_probs=53.0

Q ss_pred             ccccC-CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~-~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|.. +|+||||||+||++.   ..+.+||+|||++.......         ......|++.|+|||++....  ....
T Consensus       140 ~lH~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~--~~~~  205 (327)
T 3aln_A          140 HLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSI---------AKTRDAGCRPYMAPERIDPSA--SRQG  205 (327)
T ss_dssp             HHHHHHSCCCSCCCGGGEEEE---TTTEEEECCCSSSCC-----------------------------------------
T ss_pred             HHhccCCEeECCCCHHHEEEc---CCCCEEEccCCCceeccccc---------ccccCCCCccccCceeecccc--CcCC
Confidence            34555 899999999999994   44579999999875432211         111236899999999874211  1345


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ++.++|+|||||++|+|++|..||.+
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~pf~~  231 (327)
T 3aln_A          206 YDVRSDVWSLGITLYELATGRFPYPK  231 (327)
T ss_dssp             CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            78899999999999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.32  E-value=5.1e-13  Score=133.71  Aligned_cols=89  Identities=36%  Similarity=0.701  Sum_probs=60.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++........        ......|++.|+|||++..      ..+
T Consensus       151 ~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~  213 (310)
T 2wqm_A          151 HMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTT--------AAHSLVGTPYYMSPERIHE------NGY  213 (310)
T ss_dssp             HHHHTTCCCCCCCGGGEEEC---TTSCEEECCC--------------------------CCSSCCHHHHTT------CCC
T ss_pred             HHhhCCeeCCCCcHHHEEEc---CCCCEEEEeccceeeecCCCc--------cccccCCCeeEeChHHhCC------CCC
Confidence            44667999999999999994   456799999998754322111        1123468999999998752      457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+|||||++|+|++|..||.+.
T Consensus       214 ~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          214 NFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCccc
Confidence            88999999999999999999999763

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.32  E-value=2.8e-13  Score=137.33  Aligned_cols=89  Identities=27%  Similarity=0.376  Sum_probs=61.4

Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                      ..+|+||||||+||++.   ..+.+||+|||++...........    .......|++.|+|||++..........++.+
T Consensus       165 ~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  237 (342)
T 1b6c_B          165 KPAIAHRDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKR  237 (342)
T ss_dssp             BCEEECSCCSGGGEEEC---TTSCEEECCCTTCEEEETTTTEEE----ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHH
T ss_pred             cCCeeeCCCCHHHEEEC---CCCCEEEEECCCceeccccccccc----cccccCCcCcccCCHhhhcccccccccccCCc
Confidence            56899999999999994   455799999998754322211000    01124478999999998853111000023368


Q ss_pred             cchhhhhHHHHHHHhC
Q psy16343        204 CDLWSLGVVVYILLCG  219 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG  219 (539)
                      +|||||||++|+|++|
T Consensus       238 ~Di~slG~il~el~tg  253 (342)
T 1b6c_B          238 ADIYAMGLVFWEIARR  253 (342)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHhc
Confidence            9999999999999999

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.31  E-value=2.6e-13  Score=134.94  Aligned_cols=95  Identities=28%  Similarity=0.483  Sum_probs=66.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........   ........|++.|+|||++..     ...+
T Consensus       136 ~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-----~~~~  204 (303)
T 2vwi_A          136 YLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITR---NKVRKTFVGTPCWMAPEVMEQ-----VRGY  204 (303)
T ss_dssp             HHHHTTCCCCCCSGGGEEEC---TTCCEEECCCHHHHHCC------------------CCCTTCCHHHHHH-----HHCC
T ss_pred             HHHhCCCCCCCCChhhEEEc---CCCCEEEEeccchheeccCCCccc---hhhhcccCCCccccCHHHhcc-----ccCC
Confidence            44667999999999999994   456799999998743322111000   001123468999999998753     1347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|..||.+.
T Consensus       205 ~~~~Di~slG~il~~l~~g~~pf~~~  230 (303)
T 2vwi_A          205 DFKADIWSFGITAIELATGAAPYHKY  230 (303)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCccC
Confidence            78999999999999999999999763

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.31  E-value=4.3e-13  Score=132.94  Aligned_cols=91  Identities=33%  Similarity=0.564  Sum_probs=68.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...  .+.+||+|||++........        ......|++.|+|||++...    ...+
T Consensus       137 ~lH~~~i~H~dl~p~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~----~~~~  202 (295)
T 2clq_A          137 YLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINP--------CTETFTGTLQYMAPEIIDKG----PRGY  202 (295)
T ss_dssp             HHHHTTEECCCCSGGGEEEETT--TCCEEECCTTTCEESCC-------------CCCCCCGGGCCHHHHHHG----GGGC
T ss_pred             HHHhCCEEccCCChhhEEEECC--CCCEEEeecccccccCCCCC--------cccccCCCccccChhhhcCC----CCCC
Confidence            3466799999999999999531  45799999998754322111        12245689999999987531    1237


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+|||||++|+|++|..||..
T Consensus       203 ~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          203 GKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             SHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCccC
Confidence            7899999999999999999999964

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.31  E-value=2.2e-13  Score=134.75  Aligned_cols=92  Identities=26%  Similarity=0.412  Sum_probs=66.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........     ......++..|+|||++..      ..+
T Consensus       136 ~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  201 (291)
T 1u46_A          136 YLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALPQNDDHYV-----MQEHRKVPFAWCAPESLKT------RTF  201 (291)
T ss_dssp             HHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEECCC-CCEEE-----C-----CCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCcccCCCchheEEEc---CCCCEEEccccccccccccccchh-----hhccCCCCceeeCchhhcC------CCC
Confidence            44667999999999999995   345699999998754332211100     1113356778999998853      346


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       202 ~~~~Di~slG~il~~l~~~g~~p~~~~  228 (291)
T 1u46_A          202 SHASDTWMFGVTLWEMFTYGQEPWIGL  228 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCcccC
Confidence            789999999999999999 99999753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.31  E-value=2.8e-13  Score=136.42  Aligned_cols=91  Identities=25%  Similarity=0.333  Sum_probs=67.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||++...........     ......+++.|+|||++..      ..+
T Consensus       149 ~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  214 (318)
T 3lxp_A          149 YLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR-----VREDGDSPVFWYAPECLKE------YKF  214 (318)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECCTTCSEEE-----C---CCCCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCccCCCCchheEEE---cCCCCEEECCccccccccccccccc-----cccCCCCCceeeChHHhcC------CCC
Confidence            3466799999999999999   4456799999999854432211100     1123457888999998853      346


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||..
T Consensus       215 ~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          215 YYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCcccc
Confidence            7899999999999999999999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.31  E-value=1.4e-12  Score=143.25  Aligned_cols=90  Identities=31%  Similarity=0.547  Sum_probs=72.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++...+....+||+|||++.......         ......|++.|+|||++.      ...+
T Consensus       136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~---------~~~~~~gt~~Y~APE~l~------~~~~  200 (676)
T 3qa8_A          136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---------LCTEFVGTLQYLAPELLE------QKKY  200 (676)
T ss_dssp             HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC---------CCCCCCSCCTTCSSCSSC------CSCC
T ss_pred             HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc---------ccccccCCcccCChHHhc------cCCC
Confidence            3466799999999999999876666669999999985433221         112457899999999874      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       201 s~ksDIwSLGviLyeLltG~~Pf~~  225 (676)
T 3qa8_A          201 TVTVDYWSFGTLAFECITGFRPFLP  225 (676)
T ss_dssp             STTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhHHHHHHHHHHHHHHCCCCCCc
Confidence            8899999999999999999999965

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.30  E-value=3.2e-13  Score=133.45  Aligned_cols=89  Identities=26%  Similarity=0.430  Sum_probs=67.4

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++   +..+.++|+|||++.........       ......+++.|+|||++..      ..++
T Consensus       127 lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~  190 (288)
T 3kfa_A          127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYT-------AHAGAKFPIKWTAPESLAY------NKFS  190 (288)
T ss_dssp             HHHHTCCCSCCSGGGEEE---CGGGCEEECCCCGGGTSCSSSSE-------EETTEEECGGGCCHHHHHH------CCCC
T ss_pred             HHHCCccCCCCCcceEEE---cCCCCEEEccCccceeccCCccc-------cccCCccccCcCChhhhcc------CCCC
Confidence            455689999999999999   44567999999987543221110       1112346788999998853      4578


Q ss_pred             cccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       202 ~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      .++|+||+||++|+|++ |..||.+.
T Consensus       191 ~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          191 IKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            89999999999999999 99999763

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.30  E-value=7.8e-13  Score=129.14  Aligned_cols=85  Identities=16%  Similarity=0.300  Sum_probs=64.6

Q ss_pred             cccCC--eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        122 ERHKR--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       122 ~~~~~--IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .|..+  |+||||||+||++   +..+.++|+|||++....             .....||+.|+|||++...   ....
T Consensus       127 lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~~~~~-------------~~~~~~t~~y~aPE~~~~~---~~~~  187 (271)
T 3kmu_A          127 LHTLEPLIPRHALNSRSVMI---DEDMTARISMADVKFSFQ-------------SPGRMYAPAWVAPEALQKK---PEDT  187 (271)
T ss_dssp             HTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSCCTTS-------------CTTCBSCGGGSCHHHHHSC---GGGS
T ss_pred             HhcCCCceecCCCccceEEE---cCCcceeEEeccceeeec-------------ccCccCCccccChhhhccC---CCCC
Confidence            34456  9999999999999   445678999998864321             1134689999999987531   1122


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      ++.++||||+||++|+|++|..||.+
T Consensus       188 ~~~~~Di~slG~il~el~~g~~p~~~  213 (271)
T 3kmu_A          188 NRRSADMWSFAVLLWELVTREVPFAD  213 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCccc
Confidence            34479999999999999999999975

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.30  E-value=2.5e-13  Score=134.72  Aligned_cols=92  Identities=25%  Similarity=0.461  Sum_probs=67.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..   .+.+||+|||++...........     ......+++.|+|||.+..      ..+
T Consensus       132 ~LH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  197 (291)
T 1xbb_A          132 YLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYK-----AQTHGKWPVKWYAPECINY------YKF  197 (291)
T ss_dssp             HHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCEECCTTCSEEE-----C----CCCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCeEcCCCCcceEEEeC---CCcEEEccCCcceeeccCCCccc-----ccccCCCCceeeChHHhcc------CCC
Confidence            346679999999999999953   45699999998754332211100     0112346788999998853      347


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       198 ~~~~Di~slG~il~~l~~~g~~p~~~~  224 (291)
T 1xbb_A          198 SSKSDVWSFGVLMWEAFSYGQKPYRGM  224 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence            789999999999999999 99999763

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.30  E-value=4.1e-13  Score=131.10  Aligned_cols=90  Identities=22%  Similarity=0.394  Sum_probs=67.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.++|+|||++.........       ......+++.|+|||++..      ..+
T Consensus       119 ~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  182 (267)
T 3t9t_A          119 YLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVKWASPEVFSF------SRY  182 (267)
T ss_dssp             HHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGGBCCHHHH-------STTSTTCCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCcccCCCchheEEE---CCCCCEEEccccccccccccccc-------ccccccccccccChhhhcC------CCc
Confidence            4466789999999999999   44567999999987543211100       1112356788999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++ |..||.+.
T Consensus       183 ~~~~Di~slG~il~~l~~~g~~p~~~~  209 (267)
T 3t9t_A          183 SSKSDVWSFGVLMWEVFSEGKIPYENR  209 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cchhchhhhHHHHHHHhccCCCCCCCC
Confidence            889999999999999999 89999753

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.30  E-value=2.2e-13  Score=135.58  Aligned_cols=90  Identities=26%  Similarity=0.306  Sum_probs=67.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..   .+.++|+|||++...........     ......|+..|+|||++..      ..+
T Consensus       141 ~lH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  206 (302)
T 4e5w_A          141 YLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEYYT-----VKDDRDSPVFWYAPECLMQ------SKF  206 (302)
T ss_dssp             HHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCEECCTTCCEEE-----CCCCTTCCGGGCCHHHHHH------CEE
T ss_pred             HhhcCCcccCCCchheEEEcC---CCCEEECcccccccccCCCccee-----ccCCCCCCccccCCeeecC------CCC
Confidence            346679999999999999943   45699999998754432221100     1123467888999998753      456


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      +.++|+||+||++|+|++|..|+.
T Consensus       207 ~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          207 YIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CcchhHHHHHHHHHHHHHccCCCc
Confidence            789999999999999999998864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.30  E-value=2.3e-13  Score=137.48  Aligned_cols=91  Identities=26%  Similarity=0.395  Sum_probs=68.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++...........     ......|++.|+|||++..      ..+
T Consensus       142 ~lH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  207 (327)
T 3lxl_A          142 YLGSRRCVHRDLAARNILVE---SEAHVKIADFGLAKLLPLDKDYYV-----VREPGQSPIFWYAPESLSD------NIF  207 (327)
T ss_dssp             HHHHTTEECSCCSGGGEEEE---ETTEEEECCGGGCEECCTTCSEEE-----CSSCCCSCGGGSCHHHHHH------CEE
T ss_pred             HHHhCCccCCCCChhhEEEC---CCCCEEEcccccceecccCCccce-----eeccCCccccccCHHHhcc------CCC
Confidence            34667999999999999994   445699999998854332211100     1113457888999998753      447


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||..
T Consensus       208 ~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          208 SRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             ChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            7899999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.29  E-value=7.6e-13  Score=129.92  Aligned_cols=88  Identities=36%  Similarity=0.622  Sum_probs=60.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.++|+|||++.......         ......|++.|+|||.+..     ....
T Consensus       126 ~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-----~~~~  188 (276)
T 2h6d_A          126 YCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGE---------FLRTSCGSPNYAAPEVISG-----RLYA  188 (276)
T ss_dssp             HHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGGGCCCC----------------------CCTGGGTT-----SCCC
T ss_pred             HHHHCCCccCCCChhhEEEC---CCCCEEEeecccccccCCCc---------ceecccCCccccCHHHHcC-----CCCC
Confidence            34556899999999999994   45679999999875432211         1123468999999998753     1223


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||.+
T Consensus       189 ~~~~Di~slG~~l~~l~~g~~p~~~  213 (276)
T 2h6d_A          189 GPEVDIWSCGVILYALLCGTLPFDD  213 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCC
Confidence            5789999999999999999999965

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.29  E-value=7.6e-13  Score=132.61  Aligned_cols=91  Identities=36%  Similarity=0.643  Sum_probs=61.1

Q ss_pred             cccC-CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        122 ERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       122 ~~~~-~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .|.+ +|+||||||+||++   +..+.+||+|||++.......         ......|++.|+|||++.... .....+
T Consensus       140 lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~-~~~~~~  206 (318)
T 2dyl_A          140 LKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDK---------AKDRSAGCAAYMAPERIDPPD-PTKPDY  206 (318)
T ss_dssp             HHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC-----------------------CCTTCCHHHHC---------C
T ss_pred             HHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchhccCCc---------cccccCCCccccChhhccccc-ccccCC
Confidence            3443 89999999999999   445679999999875432211         112346899999999874211 113457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||..
T Consensus       207 ~~~~Di~slG~il~~l~~g~~pf~~  231 (318)
T 2dyl_A          207 DIRADVWSLGISLVELATGQFPYKN  231 (318)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccccchhhHHHHHHHHHhCCCCCCC
Confidence            8899999999999999999999965

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.29  E-value=3.2e-13  Score=133.55  Aligned_cols=87  Identities=16%  Similarity=0.260  Sum_probs=64.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCC-----CCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQL-----SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~-----~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      +.|..+|+||||||+||++...+..     ..+||+|||++......            ....|++.|+|||++..    
T Consensus       128 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~----  191 (289)
T 4fvq_A          128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK------------DILQERIPWVPPECIEN----  191 (289)
T ss_dssp             HHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH------------HHHHHTTTTSCHHHHHC----
T ss_pred             HHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc------------cccCCcCcccCHHHhCC----
Confidence            4466799999999999999654321     22999999987432111            12347889999998853    


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCC
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                       ...++.++||||+||++|+|++|..|+.
T Consensus       192 -~~~~~~~~DiwslG~il~el~~g~~~~~  219 (289)
T 4fvq_A          192 -PKNLNLATDKWSFGTTLWEICSGGDKPL  219 (289)
T ss_dssp             -GGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             -CCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence             2457889999999999999999655543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.29  E-value=5.9e-13  Score=133.37  Aligned_cols=87  Identities=29%  Similarity=0.454  Sum_probs=66.6

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .|..+|+||||||+||++..  ..+.+||+|||++......          ......|++.|+|||++..     ....+
T Consensus       155 lH~~~i~H~dlkp~Nil~~~--~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-----~~~~~  217 (312)
T 2iwi_A          155 CHSRGVVHRDIKDENILIDL--RRGCAKLIDFGSGALLHDE----------PYTDFDGTRVYSPPEWISR-----HQYHA  217 (312)
T ss_dssp             HHHHTEECCCCSGGGEEEET--TTTEEEECCCSSCEECCSS----------CBCCCCSCTTTSCHHHHHH-----SCBCH
T ss_pred             HHHCCeeecCCChhhEEEeC--CCCeEEEEEcchhhhcccC----------cccccCCcccccCceeeec-----CCCCC
Confidence            46678999999999999952  3456999999987543221          1224568999999998753     12234


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      .++|+||+||++|+|++|..||..
T Consensus       218 ~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          218 LPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             ccchHHHHHHHHHHHHHCCCCCCC
Confidence            589999999999999999999964

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.29  E-value=5.5e-13  Score=147.65  Aligned_cols=90  Identities=31%  Similarity=0.465  Sum_probs=66.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++.........       ......+++.|+|||++..      ..+
T Consensus       506 ~LH~~givHrDikp~NILl~---~~~~vkL~DFG~a~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~  569 (656)
T 2j0j_A          506 YLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESINF------RRF  569 (656)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---ETTEEEECCCCCCCSCCC-----------------CCGGGCCHHHHHH------CCC
T ss_pred             HHHhCCccccccchHhEEEe---CCCCEEEEecCCCeecCCCcce-------eccCCCCCcceeCHHHhcC------CCC
Confidence            34677999999999999995   3457999999998644322111       1112346789999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       570 ~~~~DiwSlG~il~ellt~g~~Pf~~~  596 (656)
T 2j0j_A          570 TSASDVWMFGVCMWEILMHGVKPFQGV  596 (656)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence            899999999999999997 99999763

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.29  E-value=4.3e-13  Score=145.15  Aligned_cols=90  Identities=27%  Similarity=0.362  Sum_probs=68.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||+++.+......       ......++..|+|||++..      ..+
T Consensus       378 ~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~  441 (535)
T 2h8h_A          378 YVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY------GRF  441 (535)
T ss_dssp             HHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTCCCHHHH-------TTCSTTSCGGGSCHHHHHH------CCC
T ss_pred             HHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccceecCCCcee-------cccCCcCcccccCHHHhcc------CCC
Confidence            34677999999999999994   4567999999998543221100       0112346778999998753      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |..||.+.
T Consensus       442 ~~~sDvwSlGv~l~el~t~g~~P~~~~  468 (535)
T 2h8h_A          442 TIKSDVWSFGILLTELTTKGRVPYPGM  468 (535)
T ss_dssp             CHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            899999999999999999 89999763

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.29  E-value=1.3e-12  Score=132.75  Aligned_cols=87  Identities=37%  Similarity=0.642  Sum_probs=67.3

Q ss_pred             ccc-CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        122 ERH-KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       122 ~~~-~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .|. .+|+||||||+||++   +..+.++|+|||++......          ......|++.|+|||++..     ...+
T Consensus       167 lH~~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-----~~~~  228 (348)
T 2pml_X          167 IHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSN-----ESSY  228 (348)
T ss_dssp             HHHTSCEECCCCCGGGEEE---CTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSS-----CCCE
T ss_pred             HhccCCEeecCCChHhEEE---cCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcC-----CCCC
Confidence            344 689999999999999   44567999999987543221          1224568999999998853     1245


Q ss_pred             Cc-ccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DK-RCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~-~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +. ++|+||+||++|+|++|..||.+.
T Consensus       229 ~~~~~Di~slG~il~~l~~g~~pf~~~  255 (348)
T 2pml_X          229 NGAKVDIWSLGICLYVMFYNVVPFSLK  255 (348)
T ss_dssp             EHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            55 899999999999999999999764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.28  E-value=2.9e-13  Score=133.12  Aligned_cols=83  Identities=41%  Similarity=0.701  Sum_probs=63.0

Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |+||||||+||++   +..+.+||+|||++........        ......|++.|+|||++..      ..++.++|+
T Consensus       137 ivH~dl~p~NIl~---~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di  199 (279)
T 2w5a_A          137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTS--------FAKTFVGTPYYMSPEQMNR------MSYNEKSDI  199 (279)
T ss_dssp             -CCCCCSGGGEEE---CSSSCEEECCCCHHHHC---CH--------HHHHHHSCCTTCCHHHHHC------C-CCHHHHH
T ss_pred             eEEeccchhhEEE---cCCCCEEEecCchheeeccccc--------cccccCCCccccChHHhcc------CCCCchhhH
Confidence            9999999999999   4456799999998754321110        1113468899999998853      457889999


Q ss_pred             hhhhHHHHHHHhCCCCCCCC
Q psy16343        207 WSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~  226 (539)
                      ||+||++|+|++|..||.+.
T Consensus       200 ~slG~il~~l~~g~~p~~~~  219 (279)
T 2w5a_A          200 WSLGCLLYELCALMPPFTAF  219 (279)
T ss_dssp             HHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHHHHHHHHHHCCCCCccc
Confidence            99999999999999999763

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.26  E-value=1.1e-12  Score=145.98  Aligned_cols=83  Identities=30%  Similarity=0.372  Sum_probs=67.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+||++..    +.+||+|||++......            ...+||+.|+|||++..       .+
T Consensus       197 ~lH~~giiHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~------------~~~~gt~~y~aPE~~~~-------~~  253 (681)
T 2pzi_A          197 YLHSIGLVYNDLKPENIMLTE----EQLKLIDLGAVSRINSF------------GYLYGTPGFQAPEIVRT-------GP  253 (681)
T ss_dssp             HHHHTTEECCCCSGGGEEECS----SCEEECCCTTCEETTCC------------SCCCCCTTTSCTTHHHH-------CS
T ss_pred             HHHHCCCeecccChHHeEEeC----CcEEEEecccchhcccC------------CccCCCccccCHHHHcC-------CC
Confidence            446679999999999999954    27999999987543211            23569999999998753       24


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|.+||.+.
T Consensus       254 ~~~sDi~slG~~l~~l~~g~~~~~~~  279 (681)
T 2pzi_A          254 TVATDIYTVGRTLAALTLDLPTRNGR  279 (681)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEETTE
T ss_pred             CCceehhhhHHHHHHHHhCCCCCccc
Confidence            78999999999999999999998764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.26  E-value=6e-13  Score=132.44  Aligned_cols=93  Identities=30%  Similarity=0.444  Sum_probs=66.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++.   ..+.+||+|||++........        ......|++.|+|||++.... .....+
T Consensus       132 ~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~-~~~~~~  199 (302)
T 2j7t_A          132 FLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKNLKTLQ--------KRDSFIGTPYWMAPEVVMCET-MKDTPY  199 (302)
T ss_dssp             HHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHHHHHHHHHH--------C-----CCGGGCCHHHHHHHH-TTSTTT
T ss_pred             HHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCCcccccccc--------ccccccCChhhcCCeeecccc-CCCCCC
Confidence            34667999999999999994   445799999997532110000        011346899999999873210 012457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|+||+||++|+|++|..||..
T Consensus       200 ~~~~Di~slG~il~~l~~g~~p~~~  224 (302)
T 2j7t_A          200 DYKADIWSLGITLIEMAQIEPPHHE  224 (302)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCcc
Confidence            8899999999999999999999975

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.24  E-value=2.8e-12  Score=131.57  Aligned_cols=43  Identities=16%  Similarity=0.175  Sum_probs=32.6

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCC-------CceeccCCCcc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLS-------PVKLCDFDLGS  284 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~-------~ikl~DFGla~  284 (539)
                      ++.++.++|  ++|||||||||+|||+..+++..       .+.|+||+-+.
T Consensus       214 ll~~l~~lH--~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          214 LIALILRLA--KHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             HHHHHHHHH--HTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             HHHHHHHHH--HCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            566777887  89999999999999997643211       26799998543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.23  E-value=9.2e-13  Score=133.04  Aligned_cols=91  Identities=29%  Similarity=0.359  Sum_probs=67.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++..   .+.+||+|||++...........     ......++..|+|||.+..      ..+
T Consensus       160 ~LH~~~ivH~dikp~NIli~~---~~~~kL~Dfg~~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~  225 (326)
T 2w1i_A          160 YLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEYYK-----VKEPGESPIFWYAPESLTE------SKF  225 (326)
T ss_dssp             HHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEECCSSCSEEE-----CSSCCSCCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCEeccCCCcceEEEcC---CCcEEEecCcchhhccccccccc-----cccCCCCceeEECchhhcC------CCC
Confidence            346679999999999999953   45699999998754332211100     0112346778999998753      347


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||..
T Consensus       226 ~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          226 SVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             EHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CchhhHHHHHHHHHHHHhcCCCCCC
Confidence            7899999999999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	539
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-39
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-31
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-37
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-31
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-37
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-30
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-36
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-29
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-35
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-29
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-35
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-29
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-35
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-31
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-34
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-28
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-34
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-32
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-33
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-30
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-33
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-30
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-33
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-28
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-32
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-28
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-32
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-32
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-31
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-26
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-31
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-28
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-31
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-28
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-30
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-26
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-30
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-22
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-28
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-26
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-28
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-25
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-28
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-24
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-28
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-25
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-28
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-26
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	7e-28
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-22
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-28
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-23
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-27
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-22
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-26
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-20
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-25
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-20
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-25
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-19
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-25
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-22
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-25
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-20
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-25
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-24
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-25
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-24
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-25
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-19
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-25
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-22
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-24
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-23
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-24
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-19
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-24
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-21
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-22
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-17
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-22
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-16
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-21
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-21
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-21
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-19
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-21
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-20
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-20
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-19
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-12
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-19
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	9e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-13
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-08
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-09
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.001

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 7e-39
 Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 33/229 (14%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              IAHRD+KPEN+L       + +KL DF        + S+ +P  TP          +
Sbjct: 129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP---------YY 179

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          YDK CD+WSLGV++YILLCGYPPFY N G               
Sbjct: 180 VAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------S 222

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA- 429
             +   I+ G Y+FP  EWS +S+E K LIR LL  +  +R++    + HPWI  +    
Sbjct: 223 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 282

Query: 430 HRPLVTPQVIRRNQSARE------LSSFAESAMSANRVILQHFSICKNP 472
             PL T +V++ ++   E       S+ A   +   ++ ++      NP
Sbjct: 283 QTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNP 331

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 1e-31
 Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 66/230 (28%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           D Y++  ++LG G    V    N  T+ ++A+K++   P     +  +EVE        P
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCP 65

Query: 107 NIIQLLEYYEDDENHERH------------------------------------------ 124
           +I+++++ YE+     +                                           
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125

Query: 125 ----KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
                 IAHRD+KPEN+L       + +KL DF        + S+ +P  TP        
Sbjct: 126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP-------- 177

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
             ++APE++          YDK CD+WSLGV++YILLCGYPPFY N G  
Sbjct: 178 -YYVAPEVLG------PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 220

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  137 bits (347), Expect = 1e-37
 Identities = 58/180 (32%), Positives = 78/180 (43%), Gaps = 27/180 (15%)

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           E++    +  I HRDLKPENIL    D    +KL DF     +     +           
Sbjct: 121 EVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLR---------E 168

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
             G+  ++APEI+   M     GY K  D+WS GV++Y LL G PPF+            
Sbjct: 169 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------ 222

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                    +   I  G+Y F   EW   SD  KDL+ R LV   +KR +A   L HP+ 
Sbjct: 223 ---------MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  120 bits (302), Expect = 2e-31
 Identities = 72/231 (31%), Positives = 92/231 (39%), Gaps = 62/231 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---------RSRVFKE 95
           F + Y  K EILG+G  + V+ C++  T  EYAVKIID   G S         R    KE
Sbjct: 1   FYENYEPK-EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 59

Query: 96  VETFHHCQGHPNIIQLLEYYEDDEN----------------------------------- 120
           V+      GHPNIIQL + YE +                                     
Sbjct: 60  VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 119

Query: 121 -----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
                      I HRDLKPENIL    D    +KL DF     +     +          
Sbjct: 120 LEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLR--------- 167

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
              G+  ++APEI+   M     GY K  D+WS GV++Y LL G PPF+  
Sbjct: 168 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 218

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  137 bits (347), Expect = 6e-37
 Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 34/219 (15%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  +    H DLKPENI+     + + +KL DF L + +    SV             
Sbjct: 137 LCHMHENNYVHLDLKPENIM-FTTKRSNELKLIDFGLTAHLDPKQSVK---------VTT 186

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+AEF APE+       E        D+WS+GV+ YILL G  PF G   ++        
Sbjct: 187 GTAEFAAPEVA------EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-------- 232

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
                     +++   ++  +  +S IS++ KD IR+LL+ D   R++    L+HPW++ 
Sbjct: 233 -------TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 285

Query: 426 AGTAHRPLVTPQVIR---RNQSARELSSFAESAMSANRV 461
                R    P       R+    +  ++ E      R+
Sbjct: 286 GNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRI 324

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  120 bits (301), Expect = 1e-30
 Identities = 58/225 (25%), Positives = 83/225 (36%), Gaps = 59/225 (26%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           D Y +  E LG GA+  V       T   +A K +       +  V KE++T    + HP
Sbjct: 26  DHYDI-HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HP 83

Query: 107 NIIQLLEYYEDDEN-----------------------------------------HERHK 125
            ++ L + +EDD                                           H    
Sbjct: 84  TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 143

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
              H DLKPENI+     + + +KL DF L + +    SV             G+AEF A
Sbjct: 144 NYVHLDLKPENIM-FTTKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAA 193

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           PE+       E        D+WS+GV+ YILL G  PF G   ++
Sbjct: 194 PEVA------EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 232

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 3e-36
 Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 31/216 (14%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L       I H D++PENI+     + S +K+ +F     +K   +       P      
Sbjct: 115 LQFLHSHNIGHFDIRPENII-YQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP------ 167

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
              E+ APE+       +        D+WSLG +VY+LL G  PF     +         
Sbjct: 168 ---EYYAPEV------HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-------- 210

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
                  +  +I    Y F E  +  IS EA D + RLLVK+ + R++A+  L+HPW+  
Sbjct: 211 -------IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263

Query: 426 AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRV 461
                   V   +  R      +       +SA R+
Sbjct: 264 KIERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAARI 299

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 7e-29
 Identities = 51/229 (22%), Positives = 82/229 (35%), Gaps = 64/229 (27%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
             + Y +  E LG+G +  V  CV   ++  Y  K + K+ G  +  V KE+   +  + 
Sbjct: 3   LYEKYMI-AEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIAR- 59

Query: 105 HPNIIQLLEYYEDDEN-------------------------------------------H 121
           H NI+ L E +E  E                                            H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
             +  I H D++PENI+     + S +K+ +F     +K   +       P         
Sbjct: 120 SHN--IGHFDIRPENII-YQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP--------- 167

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E+ APE+       +        D+WSLG +VY+LL G  PF     + 
Sbjct: 168 EYYAPEV------HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 2e-35
 Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 38/174 (21%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            + + HRD+KPEN+L     +   +K+ DF          SVH+P  +    T  G+ ++
Sbjct: 124 SKRVIHRDIKPENLLLGSAGE---LKIADFGW--------SVHAP--SSRRTTLCGTLDY 170

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           + PE++          +D++ DLWSLGV+ Y  L G PPF  N  ++             
Sbjct: 171 LPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE------------- 211

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              +  I +  + FP+     +++ A+DLI RLL  +  +R     VL+HPWI+
Sbjct: 212 --TYKRISRVEFTFPDF----VTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 259

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 2e-29
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 64/221 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGH 105
           + + G  LGKG + +V       ++   A+K++ K          ++ +EVE   H + H
Sbjct: 8   FEI-GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-H 65

Query: 106 PNIIQLLEYYEDDEN----------------------------------------HERHK 125
           PNI++L  Y+ D                                           +   K
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 125

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
           R+ HRD+KPEN+L     +   +K+ DF          SVH+P  +    T  G+ +++ 
Sbjct: 126 RVIHRDIKPENLLLGSAGE---LKIADFGW--------SVHAP--SSRRTTLCGTLDYLP 172

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PE++          +D++ DLWSLGV+ Y  L G PPF  N
Sbjct: 173 PEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 207

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (332), Expect = 3e-35
 Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 34/218 (15%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + +    GI HRDLKPEN+L    D+ S + + DF L       +         +L T  
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---------VLSTAC 170

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  ++APE++          Y K  D WS+GV+ YILLCGYPPFY              
Sbjct: 171 GTPGYVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK-------- 216

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
                  LF  I +  Y+F    W  ISD AKD IR L+ KD  KR +    L+HPWI+ 
Sbjct: 217 -------LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269

Query: 426 AGTAHRPL---VTPQVIRRNQSARELSSFAESAMSANR 460
                + +   V+ Q I++N +  +      +      
Sbjct: 270 DTALDKNIHQSVSEQ-IKKNFAKSKWKQAFNATAVVRH 306

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  116 bits (292), Expect = 1e-29
 Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 58/223 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQ 103
            +D+Y    ++LG GA++ V    +  T+   A+K I K         +  E+   H  +
Sbjct: 7   IRDIYDF-RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 65

Query: 104 GHPNIIQLLEYYEDDEN----------------------------------------HER 123
            HPNI+ L + YE   +                                        +  
Sbjct: 66  -HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 124

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
              I HRDLKPEN+L    D+ S + + DF L       +         +L T  G+  +
Sbjct: 125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---------VLSTACGTPGY 175

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +APE++          Y K  D WS+GV+ YILLCGYPPFY  
Sbjct: 176 VAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDE 212

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 9e-35
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 35/176 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
           H+    I HRDLK +NI    P     VK+ D  L + +K  +              +G+
Sbjct: 129 HTRTPPIIHRDLKCDNIFITGPT--GSVKIGDLGL-ATLKRASFAK---------AVIGT 176

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
            EFMAPE+           YD+  D+++ G+ +  +     P+                 
Sbjct: 177 PEFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYPYSECQ------------- 216

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                ++  +  G    P         E K++I   + ++  +R S   +L H + 
Sbjct: 217 -NAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (301), Expect = 3e-31
 Identities = 46/235 (19%), Positives = 79/235 (33%), Gaps = 68/235 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           +      +G+G++ +V   ++  T +E A   +    L    R R  +E E     Q HP
Sbjct: 10  FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HP 68

Query: 107 NIIQLLEYYEDDEN---------------------------------------------- 120
           NI++  + +E                                                  
Sbjct: 69  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           H R   I HRDLK +NI    P     VK+ D  L + +K  +              +G+
Sbjct: 129 HTRTPPIIHRDLKCDNIFITGPT--GSVKIGDLGL-ATLKRASFAK---------AVIGT 176

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
            EFMAPE+           YD+  D+++ G+ +  +     P+         ++R
Sbjct: 177 PEFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR 224

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  130 bits (327), Expect = 4e-34
 Identities = 67/264 (25%), Positives = 105/264 (39%), Gaps = 58/264 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  +  I H D+KPENI+C      S VK+ DF L + +  +  V             
Sbjct: 140 LKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVK---------VTT 189

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
            +AEF APEIV      +        D+W++GV+ Y+LL G  PF G    +        
Sbjct: 190 ATAEFAAPEIV------DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-------- 235

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
                     ++++  ++F E  +S++S EAKD I+ LL K+ RKRL+    L+HPW+  
Sbjct: 236 -------TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL-- 286

Query: 426 AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHFSICKNPKDEQWLATPTNMR 485
                      +    N ++R  SS                   +    E++   P    
Sbjct: 287 -----------KGDHSNLTSRIPSSRYNKI--------------RQKIKEKYADWPAPQP 321

Query: 486 LSPPSESLLVQRRQRLQSQSQSDN 509
                 +    R+ R Q     D+
Sbjct: 322 AIGRIANFSSLRKHRPQEYQIYDS 345

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  114 bits (287), Expect = 1e-28
 Identities = 57/225 (25%), Positives = 81/225 (36%), Gaps = 59/225 (26%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           D Y +  E LG GA+  V  CV   T   +  K I+      +  V  E+   +    HP
Sbjct: 29  DYYDI-LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HP 86

Query: 107 NIIQLLEYYEDDEN-----------------------------------------HERHK 125
            +I L + +ED                                            H    
Sbjct: 87  KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 146

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I H D+KPENI+C      S VK+ DF L + +  +  V              +AEF A
Sbjct: 147 SIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVK---------VTTATAEFAA 196

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           PEIV      +        D+W++GV+ Y+LL G  PF G    +
Sbjct: 197 PEIV------DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 235

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 9e-34
 Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 28/174 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              I HRDLK  NIL         +KL DF +        S  +        + +G+  +
Sbjct: 128 DNKIIHRDLKAGNILFTLDGD---IKLADFGV--------SAKNTRTIQRRDSFIGTPYW 176

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE+V      +   YD + D+WSLG+ +  +    PP +                   
Sbjct: 177 MAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR------------- 222

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
             +   I +        + S  S   KD +++ L K+   R + + +L+HP+++
Sbjct: 223 --VLLKIAKSEPPTLA-QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 273

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 4e-32
 Identities = 52/221 (23%), Positives = 83/221 (37%), Gaps = 55/221 (24%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           +D + + GE+ G GA+  V    N  T +  A K+ID            E++    C  H
Sbjct: 11  EDFWEIIGEL-GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 68

Query: 106 PNIIQLLEYYEDDEN-----------------HERHK----------------------- 125
           PNI++LL+ +  + N                  E  +                       
Sbjct: 69  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 128

Query: 126 -RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
            +I HRDLK  NIL         +KL DF +        S  +        + +G+  +M
Sbjct: 129 NKIIHRDLKAGNILFTLDGD---IKLADFGV--------SAKNTRTIQRRDSFIGTPYWM 177

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           APE+V      +   YD + D+WSLG+ +  +    PP + 
Sbjct: 178 APEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIEPPHHE 217

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 1e-33
 Identities = 56/221 (25%), Positives = 86/221 (38%), Gaps = 43/221 (19%)

Query: 230 DCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
           +     G+    C+E    L       + HRD+K +NIL         VKL DF   + I
Sbjct: 110 ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQI 166

Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
               S  S        T VG+  +MAPE+V          Y  + D+WSLG++   ++ G
Sbjct: 167 TPEQSKRS--------TMVGTPYWMAPEVV------TRKAYGPKVDIWSLGIMAIEMIEG 212

Query: 347 YPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVK 406
            PP+                      L+     G  +        +S   +D + R L  
Sbjct: 213 EPPYLN--------------ENPLRALYLIATNGTPELQN--PEKLSAIFRDFLNRCLDM 256

Query: 407 DARKRLSAASVLKHPWISTAGTAHRPL--VTPQVIRRNQSA 445
           D  KR SA  +L+H ++  A    +PL  +TP +I   + A
Sbjct: 257 DVEKRGSAKELLQHQFLKIA----KPLSSLTP-LIAAAKEA 292

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 4e-30
 Identities = 48/220 (21%), Positives = 82/220 (37%), Gaps = 58/220 (26%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           +  Y    E +G+GA  +V T +++ T  E A++ ++      +  +  E+      + +
Sbjct: 19  KKKYTR-FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-N 76

Query: 106 PNIIQLLEYYEDDEN---------------------------------------HERHKR 126
           PNI+  L+ Y   +                                             +
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRD+K +NIL         VKL DF   + I    S  S        T VG+  +MAP
Sbjct: 137 VIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAP 185

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E+V          Y  + D+WSLG++   ++ G PP+   
Sbjct: 186 EVV------TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 2e-33
 Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 30/174 (17%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             GI HRD+KPEN+L    D    +K+ DF L +  ++N          LL    G+  +
Sbjct: 121 GIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRER------LLNKMCGTLPY 171

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           +APE++          + +  D+WS G+V+  +L G  P+                    
Sbjct: 172 VAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------- 213

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
              +   ++         W  I      L+ ++LV++   R++   + K  W +
Sbjct: 214 -QEYSDWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 1e-30
 Identities = 56/223 (25%), Positives = 87/223 (39%), Gaps = 57/223 (25%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQ 103
           F + + L  + LG+GAY  VQ  VN +TE   AVKI+D          + KE+       
Sbjct: 3   FVEDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN 61

Query: 104 GHPNIIQL-------------LEYYEDDENHER--------------------------- 123
            H N+++              LEY    E  +R                           
Sbjct: 62  -HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
              I HRD+KPEN+L    D    +K+ DF L +  ++N          LL    G+  +
Sbjct: 121 GIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRER------LLNKMCGTLPY 171

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           +APE++          + +  D+WS G+V+  +L G  P+   
Sbjct: 172 VAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQP 209

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  127 bits (320), Expect = 2e-33
 Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 39/212 (18%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L +     + HRD+K  NIL   P     VKL DF   S +    S             V
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGL---VKLGDFGSASIMAPANSF------------V 172

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +MAPE++   +  +   YD + D+WSLG+    L    PP +              
Sbjct: 173 GTPYWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------- 219

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
                  L+H  Q        G WS   +  ++ +   L K  + R ++  +LKH ++  
Sbjct: 220 ----MSALYHIAQNESPALQSGHWS---EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL- 271

Query: 426 AGTAHRPLVTPQVIRRNQSA-RELSSFAESAM 456
                 P V   +I+R + A REL +     M
Sbjct: 272 --RERPPTVIMDLIQRTKDAVRELDNLQYRKM 301

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  112 bits (281), Expect = 3e-28
 Identities = 52/224 (23%), Positives = 78/224 (34%), Gaps = 63/224 (28%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHH 101
            + L+    EI G G++ +V    ++      A+K +      S      + KEV     
Sbjct: 13  PEKLFSDLREI-GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71

Query: 102 CQGHPNIIQLLEYYEDDEN---------------HERHKR-------------------- 126
            + HPN IQ    Y  +                  E HK+                    
Sbjct: 72  LR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130

Query: 127 -----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
                + HRD+K  NIL   P     VKL DF   S +    S             VG+ 
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGL---VKLGDFGSASIMAPANSF------------VGTP 175

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
            +MAPE++   +  +   YD + D+WSLG+    L    PP + 
Sbjct: 176 YWMAPEVI---LAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 1e-32
 Identities = 64/208 (30%), Positives = 89/208 (42%), Gaps = 39/208 (18%)

Query: 225 GNCGEDCGWQRGETCHACQEILFHSI--------QQGIAHRDLKPENILCVHPDQLSP-V 275
           G    D   ++              I           IAH DLKPENI+ +  +   P +
Sbjct: 97  GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 156

Query: 276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS 335
           K+ DF L   I F                 G+ EF+APEIVN              D+WS
Sbjct: 157 KIIDFGLAHKIDFGNEFK---------NIFGTPEFVAPEIVNY------EPLGLEADMWS 201

Query: 336 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE 395
           +GV+ YILL G  PF G+  ++                  ++   +Y+F +  +S  S  
Sbjct: 202 IGVITYILLSGASPFLGDTKQE---------------TLANVSAVNYEFEDEYFSNTSAL 246

Query: 396 AKDLIRRLLVKDARKRLSAASVLKHPWI 423
           AKD IRRLLVKD +KR++    L+HPWI
Sbjct: 247 AKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 2e-28
 Identities = 70/233 (30%), Positives = 93/233 (39%), Gaps = 64/233 (27%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRSRVFKEVET 98
             D Y   GE LG G +A V+ C    T L+YA K I K        G SR  + +EV  
Sbjct: 8   VDDYYDT-GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66

Query: 99  FHHCQGHPNIIQLLEYYEDDEN-------------------------------------- 120
               Q HPN+I L E YE+  +                                      
Sbjct: 67  LKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125

Query: 121 --HERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
             +    +IAH DLKPENI+ +  +   P +K+ DF L   I F                
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---------NI 176

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
            G+ EF+APEIVN              D+WS+GV+ YILL G  PF G+  ++
Sbjct: 177 FGTPEFVAPEIVN------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 4e-32
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 45/201 (22%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
              +  I HRD+KP NIL     +   +KLCDF +             L   +  + VG+
Sbjct: 121 RE-KHKIMHRDVKPSNILVNSRGE---IKLCDFGVSG----------QLIDSMANSFVGT 166

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED---------- 357
             +M+PE +        + Y  + D+WS+G+ +  +  G  P      ++          
Sbjct: 167 RSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220

Query: 358 ---------------CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRR 402
                               G        I        +   P+      S E +D + +
Sbjct: 221 GDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 280

Query: 403 LLVKDARKRLSAASVLKHPWI 423
            L+K+  +R     ++ H +I
Sbjct: 281 CLIKNPAERADLKQLMVHAFI 301

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 5e-32
 Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 64/222 (28%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQGHPNIIQ 110
           K   LG G    V    +  + L  A K+I   +    R+++ +E++  H C   P I+ 
Sbjct: 10  KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVG 68

Query: 111 LLEYYEDDEN------------------------------------------HERHKRIA 128
               +  D                                             E+H +I 
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-KIM 127

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRD+KP NIL     +   +KLCDF +             L   +  + VG+  +M+PE 
Sbjct: 128 HRDVKPSNILVNSRGE---IKLCDFGVSG----------QLIDSMANSFVGTRSYMSPER 174

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +        + Y  + D+WS+G+ +  +  G  P      ++
Sbjct: 175 LQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 1e-31
 Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 35/176 (19%)

Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
                 + HRDLKP N+          VKL DF L   +  +TS             VG+
Sbjct: 129 SDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAK--------AFVGT 177

Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
             +M+PE +N         Y+++ D+WSLG ++Y L    PPF     ++          
Sbjct: 178 PYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---------- 221

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                L   I++G +          SDE  ++I R+L      R S   +L++P I
Sbjct: 222 -----LAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (267), Expect = 1e-26
 Identities = 49/231 (21%), Positives = 74/231 (32%), Gaps = 72/231 (31%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           Y +    +G G+Y   Q             K +D   +    +  +  EV      + HP
Sbjct: 6   YEV-LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 63

Query: 107 NIIQLLEYYEDDEN---------------------------------------------- 120
           NI++  +   D  N                                              
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 121 --HERHK---RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
             H R      + HRDLKP N+          VKL DF L   +  +TS           
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAK-------- 172

Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             VG+  +M+PE +N         Y+++ D+WSLG ++Y L    PPF   
Sbjct: 173 AFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAF 217

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 2e-31
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 39/209 (18%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L     +GI +RDLK +NIL    D+   +K+ DF +        +  +        T  
Sbjct: 116 LQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTN--------TFC 164

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ +++APEI+          Y+   D WS GV++Y +L G  PF+G   E+        
Sbjct: 165 GTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-------- 210

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS-VLKHPWIS 424
                  LFHSI+  +  +P      +  EAKDL+ +L V++  KRL     + +HP   
Sbjct: 211 -------LFHSIRMDNPFYPRW----LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 259

Query: 425 T--AGTAHRPLVTPQVIRRNQSARELSSF 451
                   R  + P    + +S  + S+F
Sbjct: 260 EINWEELERKEIDPPFRPKVKSPFDCSNF 288

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 1e-28
 Identities = 46/221 (20%), Positives = 76/221 (34%), Gaps = 61/221 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGH 105
           + L  ++LGKG++  V       T   +A+K + K              E         H
Sbjct: 4   FIL-HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 106 PNIIQLLEYYEDDEN----------------------------------------HERHK 125
           P +  +   ++  EN                                            K
Sbjct: 63  PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 122

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I +RDLK +NIL    D+   +K+ DF +        +  +        T  G+ +++A
Sbjct: 123 GIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTN--------TFCGTPDYIA 171

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PEI+          Y+   D WS GV++Y +L G  PF+G 
Sbjct: 172 PEILL------GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 206

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 5e-31
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 40/186 (21%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L +   +GI HRDLKPENIL    ++   +++ DF     +   +            + V
Sbjct: 121 LEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK------QARANSFV 171

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+A++++PE++            K  DLW+LG ++Y L+ G PPF               
Sbjct: 172 GTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGN----------- 214

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA------SVLK 419
               + ++F  I +  YDFPE        +A+DL+ +LLV DA KRL          +  
Sbjct: 215 ----EYLIFQKIIKLEYDFPEK----FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266

Query: 420 HPWIST 425
           HP+  +
Sbjct: 267 HPFFES 272

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 1e-28
 Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 60/221 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           ++  G+ILG+G++++V     + T  EYA+KI++K   +  +    V +E +       H
Sbjct: 10  FKF-GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 67

Query: 106 PNIIQLLEYYEDDEN---------------------------------------HERHKR 126
           P  ++L   ++DDE                                           H +
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127

Query: 127 -IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I HRDLKPENIL    ++   +++ DF     +   +            + VG+A++++
Sbjct: 128 GIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK------QARANSFVGTAQYVS 178

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PE++            K  DLW+LG ++Y L+ G PPF   
Sbjct: 179 PELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAG 213

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  119 bits (298), Expect = 2e-30
 Identities = 58/251 (23%), Positives = 93/251 (37%), Gaps = 49/251 (19%)

Query: 213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQ--EILFHSIQQGIAHRDLKPENILCVHPD 270
           +   + G   F                +A +    L +   + I +RDLKPENIL    D
Sbjct: 82  IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---D 138

Query: 271 QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR 330
           +   +K+ DF             +     +  T  G+ +++APE+V+         Y+K 
Sbjct: 139 KNGHIKITDFG-----------FAKYVPDVTYTLCGTPDYIAPEVVST------KPYNKS 181

Query: 331 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWS 390
            D WS G+++Y +L GY PFY +                    +  I      FP     
Sbjct: 182 IDWWSFGILIYEMLAGYTPFYDSNTMK---------------TYEKILNAELRFPPF--- 223

Query: 391 TISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWIST---AGTAHRPLVTPQVIRRN 442
             +++ KDL+ RL+ +D  +RL         V  HPW           R + TP      
Sbjct: 224 -FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQ 282

Query: 443 QSARELSSFAE 453
           Q   + S F +
Sbjct: 283 QGQGDTSQFDK 293

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  107 bits (269), Expect = 2e-26
 Identities = 48/221 (21%), Positives = 82/221 (37%), Gaps = 65/221 (29%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGH 105
           +++    LG G++  V    +      YA+K++ K   +          E         H
Sbjct: 6   FQI-LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-H 63

Query: 106 PNIIQLLEYYEDDEN----------------------------------------HERHK 125
           P II++   ++D +                                         +   K
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 123

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            I +RDLKPENIL    D+   +K+ DF             +     +  T  G+ +++A
Sbjct: 124 DIIYRDLKPENILL---DKNGHIKITDFG-----------FAKYVPDVTYTLCGTPDYIA 169

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           PE+V+         Y+K  D WS G+++Y +L GY PFY +
Sbjct: 170 PEVVS------TKPYNKSIDWWSFGILIYEMLAGYTPFYDS 204

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 2e-30
 Identities = 60/247 (24%), Positives = 89/247 (36%), Gaps = 29/247 (11%)

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 245
           P +V  F     S  D+   L  +   V   L  Y       G      +       + +
Sbjct: 70  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129

Query: 246 LF-HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
            F HS    + HRDLKP+NIL     Q   +KL DF L     F  ++          + 
Sbjct: 130 DFLHS--HRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALT---------SV 175

Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED------- 357
           V +  + APE++        S Y    DLWS+G +   +    P F G+   D       
Sbjct: 176 VVTLWYRAPEVL------LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 229

Query: 358 -CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
             G    E       +   +         E   + I +  KDL+ + L  +  KR+SA S
Sbjct: 230 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 289

Query: 417 VLKHPWI 423
            L HP+ 
Sbjct: 290 ALSHPYF 296

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.8 bits (232), Expect = 8e-22
 Identities = 48/233 (20%), Positives = 74/233 (31%), Gaps = 70/233 (30%)

Query: 49  YRLKGEILGKGAYASVQTCVNILT-ELEYAVKIIDKLPGHS--RSRVFKEVETFHHCQG- 104
           Y      +G+GAY  V    ++       A+K +    G         +EV    H +  
Sbjct: 9   YEC-VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 105 -HPNIIQLLEYYEDDENHER---------------------------------------- 123
            HPN+++L +                                                  
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 124 ------HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
                   R+ HRDLKP+NIL     Q   +KL DF L     F  ++          + 
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALT---------SV 175

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           V +  + APE++        S Y    DLWS+G +   +    P F G+   D
Sbjct: 176 VVTLWYRAPEVL------LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 222

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  112 bits (282), Expect = 1e-28
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 29/180 (16%)

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
           + L  S Q GI HRD+KP NI+       + VK+ DF +   I  + +  +  A      
Sbjct: 122 QALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV---- 174

Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
            +G+A++++PE             D R D++SLG V+Y +L G PPF G+          
Sbjct: 175 -IGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------ 221

Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                    + +   +     P      +S +   ++ + L K+   R   A+ ++   +
Sbjct: 222 ---------VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  107 bits (267), Expect = 1e-26
 Identities = 53/238 (22%), Positives = 85/238 (35%), Gaps = 63/238 (26%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHH 101
             D Y L GEILG G  + V    ++    + AVK++        S   R  +E +    
Sbjct: 5   LSDRYEL-GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 102 CQGHPNIIQLLEYYEDDEN----------------------------------------- 120
              HP I+ + +  E +                                           
Sbjct: 64  LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122

Query: 121 ---HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
                    I HRD+KP NI+       + VK+ DF +   I  + +  +  A       
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV----- 174

Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR 235
           +G+A++++PE             D R D++SLG V+Y +L G PPF G+      +Q 
Sbjct: 175 IGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 226

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 1e-28
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 25/211 (11%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
              + HRDLKP N+L         +K+CDF L      +           L   V +  +
Sbjct: 127 SANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTG-----FLTEYVATRWY 178

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA-- 368
            APEI+    G     Y K  D+WS+G ++  +L   P F G    D          +  
Sbjct: 179 RAPEIMLNSKG-----YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 233

Query: 369 ---CQEILFHSIQQGHYDFPEGE-------WSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                 I+    +      P          +     +A DL+ ++L  +  KR+     L
Sbjct: 234 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293

Query: 419 KHPWISTAGTAHRPLVTPQVIRRNQSARELS 449
            HP++          +     + +    +L 
Sbjct: 294 AHPYLEQYYDPSDEPIAEAPFKFDMELDDLP 324

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-25
 Identities = 54/271 (19%), Positives = 88/271 (32%), Gaps = 60/271 (22%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPN 107
           Y      +G+GAY  V +  + + ++  A+K I      +   R  +E++     + H N
Sbjct: 10  YTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-HEN 67

Query: 108 IIQLLEYYEDDENHERH------------------------------------------- 124
           II + +        +                                             
Sbjct: 68  IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 127

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
             + HRDLKP N+L         +K+CDF L      +           L   V +  + 
Sbjct: 128 ANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTG-----FLTEYVATRWYR 179

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA-CQ 243
           APEI+         GY K  D+WS+G ++  +L   P F G    D          +  Q
Sbjct: 180 APEIMLNSK-----GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 234

Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSP 274
           E L   I     +  L   +   V  ++L P
Sbjct: 235 EDLNCIINLKARNYLLSLPHKNKVPWNRLFP 265

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 3e-28
 Identities = 46/237 (19%), Positives = 80/237 (33%), Gaps = 27/237 (11%)

Query: 212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQ--EILFHSIQQGIAHRDLKPENILCVHP 269
           +V+  +                      +     + L +  Q  I HRDLKP N+L    
Sbjct: 77  LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL--- 133

Query: 270 DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK 329
           D+   +KL DF L          ++          V +  + APE++          Y  
Sbjct: 134 DENGVLKLADFGLAKSFGSPNRAYTH--------QVVTRWYRAPELLFGARM-----YGV 180

Query: 330 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH---------ACQEILFHSIQQG 380
             D+W++G ++  LL   P   G+   D   +  ET            C    + + +  
Sbjct: 181 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240

Query: 381 HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQ 437
                   +S   D+  DLI+ L + +   R++A   LK  + S           P+
Sbjct: 241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPR 297

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 4e-24
 Identities = 47/222 (21%), Positives = 74/222 (33%), Gaps = 62/222 (27%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKIIDK-----LPGHSRSRVFKEVETFHHCQGHPNI 108
           + LG+G +A+V    +  T    A+K I                 +E++       HPNI
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNI 62

Query: 109 IQLLEYYEDDEN---------------------------------------HERHKR-IA 128
           I LL+ +    N                                          H+  I 
Sbjct: 63  IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122

Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
           HRDLKP N+L    D+   +KL DF L          ++          V +  + APE+
Sbjct: 123 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTH--------QVVTRWYRAPEL 171

Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +          Y    D+W++G ++  LL   P   G+   D
Sbjct: 172 LFGARM-----YGVGVDMWAVGCILAELLLRVPFLPGDSDLD 208

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 4e-28
 Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 42/178 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + H    G+ HRD+K ENIL         +KL DF  GSG     +V++           
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDF--GSGALLKDTVYT--------DFD 170

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+  +  PE +          + +   +WSLG+++Y ++CG  PF  +            
Sbjct: 171 GTRVYSPPEWIR-----YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------ 213

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                      I +G   F +     +S E + LIR  L      R +   +  HPW+
Sbjct: 214 ---------EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 5e-25
 Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 66/230 (28%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------LPGHSRSRVFKEVET 98
            +  Y++ G +LG G + SV + + +   L  A+K ++K          + +RV  EV  
Sbjct: 2   LESQYQV-GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60

Query: 99  FHHCQ-GHPNIIQLLEYYEDDEN------------------------------------- 120
                 G   +I+LL+++E  ++                                     
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120

Query: 121 ----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
               H  +  + HRD+K ENIL         +KL DF  GSG     +V++         
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDF--GSGALLKDTVYT--------D 168

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
             G+  +  PE +          + +   +WSLG+++Y ++CG  PF  +
Sbjct: 169 FDGTRVYSPPEWIR-----YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 4e-28
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 27/176 (15%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + +   + I HRDLK  NI      +   VK+ DF L       T       +       
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLA------TVKSRWSGSHQFEQLS 167

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           GS  +MAPE+       + + Y  + D+++ G+V+Y L+ G  P+               
Sbjct: 168 GSILWMAPEV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN------------- 211

Query: 366 CHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
               ++ +   + +G+      +  S      K L+   L K   +R     +L  
Sbjct: 212 -INNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (267), Expect = 1e-26
 Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 59/219 (26%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
             + G+ +G G++ +V          + AVK+++              EV      + H 
Sbjct: 10  ITV-GQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HV 64

Query: 107 NIIQLLEYYEDDE----------------------------------------NHERHKR 126
           NI+  + Y    +                                        ++   K 
Sbjct: 65  NILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRDLK  NI      +   VK+ DF L       T       +       GS  +MAP
Sbjct: 125 IIHRDLKSNNIFL---HEDLTVKIGDFGLA------TVKSRWSGSHQFEQLSGSILWMAP 175

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E+       + + Y  + D+++ G+V+Y L+ G  P+  
Sbjct: 176 EV---IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 7e-28
 Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 25/200 (12%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
                  L++  +  I HRD+K  N+L         +KL DF L        +      T
Sbjct: 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYT 179

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 V +  +  PE++          Y    DLW  G ++  +    P   GN  +  
Sbjct: 180 ----NRVVTLWYRPPELLL-----GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 230

Query: 359 GWQRGETCHACQEILFHSIQQGH----YDFPEGEWSTI---------SDEAKDLIRRLLV 405
                + C +    ++ ++         +  +G+   +            A DLI +LLV
Sbjct: 231 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 290

Query: 406 KDARKRLSAASVLKHPWIST 425
            D  +R+ +   L H +  +
Sbjct: 291 LDPAQRIDSDDALNHDFFWS 310

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.3 bits (236), Expect = 3e-22
 Identities = 38/262 (14%), Positives = 75/262 (28%), Gaps = 64/262 (24%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           Y      +G+G +  V    +  T  + A+K +              +E++     + H 
Sbjct: 12  YEK-LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HE 69

Query: 107 NIIQLLEYYEDDEN---------------------------------------------- 120
           N++ L+E      +                                              
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 129

Query: 121 --HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
             +    +I HRD+K  N+L         +KL DF L        +      T      V
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYT----NRV 182

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
            +  +  PE++          Y    DLW  G ++  +    P   GN  +       + 
Sbjct: 183 VTLWYRPPELLL-----GERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 237

Query: 239 CHACQEILFHSIQQGIAHRDLK 260
           C +    ++ ++     +  L+
Sbjct: 238 CGSITPEVWPNVDNYELYEKLE 259

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 7e-28
 Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 41/184 (22%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L +   + + +RD+K EN++    D+   +K+ DF L                  + T  
Sbjct: 118 LEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGL--------CKEGISDGATMKTFC 166

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E++APE++      E + Y +  D W LGVV+Y ++CG  PFY    E         
Sbjct: 167 GTPEYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-------- 212

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKH 420
                  LF  I      FP     T+S EAK L+  LL KD ++RL      A  V++H
Sbjct: 213 -------LFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261

Query: 421 PWIS 424
            +  
Sbjct: 262 RFFL 265

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 2e-23
 Identities = 45/220 (20%), Positives = 81/220 (36%), Gaps = 62/220 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGH 105
           +    ++LGKG +  V       T   YA+KI+ K    ++   +    E     + + H
Sbjct: 7   FDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-H 64

Query: 106 PNIIQLLEYYEDDEN----------------------------------------HERHK 125
           P +  L   ++  +                                         +   +
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
            + +RD+K EN++    D+   +K+ DF L                  + T  G+ E++A
Sbjct: 125 DVVYRDIKLENLML---DKDGHIKITDFGL--------CKEGISDGATMKTFCGTPEYLA 173

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           PE++      E + Y +  D W LGVV+Y ++CG  PFY 
Sbjct: 174 PEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  110 bits (276), Expect = 3e-27
 Identities = 55/272 (20%), Positives = 106/272 (38%), Gaps = 54/272 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            + + +RDLKP NIL    D+   V++ D  L           S           G+  +
Sbjct: 125 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV----------GTHGY 171

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D             
Sbjct: 172 MAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------------- 213

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWIST 425
               H I +           + S E + L+  LL +D  +RL      A  V + P+  +
Sbjct: 214 ---KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270

Query: 426 -------AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRV------ILQHFSICKNP 472
                        PL+ P+       A ++ SF E      ++      + ++F +  + 
Sbjct: 271 LDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISE 330

Query: 473 KDEQWLATPTNMRLSPPSESLLVQRRQRLQSQ 504
           + +Q +A      ++  ++ L  + R++ +++
Sbjct: 331 RWQQEVAETVFDTINAETDRL--EARKKTKNK 360

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 97.5 bits (242), Expect = 1e-22
 Identities = 45/227 (19%), Positives = 80/227 (35%), Gaps = 64/227 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-----LPGHSRSRVFKEVETFHHCQ 103
           + +   I+G+G +  V  C    T   YA+K +DK       G + +   + + +     
Sbjct: 6   FSV-HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 104 GHPNIIQLLEYYEDDEN----------------------------------------HER 123
             P I+ +   +   +                                         H  
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 124

Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
           ++ + +RDLKP NIL    D+   V++ D  L           S           G+  +
Sbjct: 125 NRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHASV----------GTHGY 171

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           MAPE++      +   YD   D +SLG +++ LL G+ PF  +  +D
Sbjct: 172 MAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 213

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 9e-26
 Identities = 42/184 (22%), Positives = 64/184 (34%), Gaps = 26/184 (14%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             GI HRD+KP+N+L       + +KLCDF     +                + + S  +
Sbjct: 140 SFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNV---------SYICSRYY 188

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE++          Y    D+WS G V+  LL G P F G+ G D   +  +      
Sbjct: 189 RAPELIFGATD-----YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243

Query: 371 EILFHSIQQGHYDF----------PEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
                 +   + +F           +        EA  L  RLL      RL+      H
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303

Query: 421 PWIS 424
            +  
Sbjct: 304 SFFD 307

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 4e-20
 Identities = 41/228 (17%), Positives = 73/228 (32%), Gaps = 70/228 (30%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL 111
             +++G G++  V       +    A+K + +     +    +E++       H NI++L
Sbjct: 24  DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLD-HCNIVRL 78

Query: 112 LEYYEDDENHER------------------------------------------------ 123
             ++      +                                                 
Sbjct: 79  RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138

Query: 124 -HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
               I HRD+KP+N+L       + +KLCDF     +                + + S  
Sbjct: 139 HSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNV---------SYICSRY 187

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           + APE++          Y    D+WS G V+  LL G P F G+ G D
Sbjct: 188 YRAPELIFGATD-----YTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  104 bits (261), Expect = 1e-25
 Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 52/248 (20%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
           Y++ G  +G+G++  +    N+L   + A+K   +       ++  E  T+    G   I
Sbjct: 7   YKV-GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGI 63

Query: 109 IQLLEYYEDDEN----------------------------------------HERHKRIA 128
             +  + ++  +                                            K + 
Sbjct: 64  PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLV 123

Query: 129 HRDLKPENILCVHPDQL--SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           +RD+KP+N L   P+    + + + DF +      +      +         G+A +M+ 
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGM-VKFYRDPVTKQHIPYREKKNLSGTARYMSI 182

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
                          +R DL +LG V    L G  P+ G        +        Q   
Sbjct: 183 NTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 236

Query: 247 FHSIQQGI 254
              +  G 
Sbjct: 237 LRELCAGF 244

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 88.3 bits (218), Expect = 5e-20
 Identities = 27/212 (12%), Positives = 59/212 (27%), Gaps = 21/212 (9%)

Query: 211 VVVYILLCGYPPFYGNCGEDCGW-QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHP 269
           +V+ +L          CG                  +    ++ + +RD+KP+N L   P
Sbjct: 78  LVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRP 137

Query: 270 DQL--SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
           +    + + + DF +      +      +         G+A +M+               
Sbjct: 138 NSKNANMIYVVDFGM-VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG------REQ 190

Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
            +R DL +LG V    L G  P+           +G      ++      ++        
Sbjct: 191 SRRDDLEALGHVFMYFLRGSLPW-----------QGLKAATNKQKYERIGEKKQSTPLRE 239

Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
             +   +E    +                +  
Sbjct: 240 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  104 bits (260), Expect = 1e-25
 Identities = 42/237 (17%), Positives = 82/237 (34%), Gaps = 31/237 (13%)

Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAH 256
           YD       L +V   L          C                ++   + +   + + H
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--TAKSFLLQLLNGIAYCHDRRVLH 123

Query: 257 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 316
           RDLKP+N+L     +   +K+ DF L          ++          + +  + AP+++
Sbjct: 124 RDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYT--------HEIVTLWYRAPDVL 172

Query: 317 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGETCHA 368
                  +  Y    D+WS+G +   ++ G P F G    D         G    +    
Sbjct: 173 M-----GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 369 CQEILFHSIQQGHYDFPEGE--WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
             E+  +      Y+    E     + +   DL+ ++L  D  +R++A   L+H + 
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 85.7 bits (211), Expect = 4e-19
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 61/224 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHP 106
           Y    E +G+G Y  V    N   E  +A+K I  +K      S   +E+      + H 
Sbjct: 4   YHG-LEKIGEGTYGVVYKAQNNYGE-TFALKKIRLEKEDEGIPSTTIREISILKELK-HS 60

Query: 107 NIIQLLEYYEDDEN----------------------------------------HERHKR 126
           NI++L +     +                                         +   +R
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRDLKP+N+L     +   +K+ DF L          ++          + +  + AP
Sbjct: 121 VLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYT--------HEIVTLWYRAP 169

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           +++       +  Y    D+WS+G +   ++ G P F G    D
Sbjct: 170 DVLM-----GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 1e-25
 Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 26/189 (13%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L       + HRDLKP+N+L    +    +KL DF L          ++          V
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYT--------HEV 163

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
            +  + APEI+          Y    D+WSLG +   ++     F G+   D  ++   T
Sbjct: 164 VTLWYRAPEILL-----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218

Query: 366 CHACQEILF---HSIQQGHYDFPEGE-------WSTISDEAKDLIRRLLVKDARKRLSAA 415
                E+++    S+      FP+            + ++ + L+ ++L  D  KR+SA 
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278

Query: 416 SVLKHPWIS 424
           + L HP+  
Sbjct: 279 AALAHPFFQ 287

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.2 bits (233), Expect = 5e-22
 Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 60/252 (23%)

Query: 54  EILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNIIQL 111
           E +G+G Y  V    N LT    A+K I  D       S   +E+        HPNI++L
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKL 66

Query: 112 LEYYEDDEN-----------------------------------------HERHKRIAHR 130
           L+    +                                                R+ HR
Sbjct: 67  LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126

Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           DLKP+N+L    +    +KL DF L          ++          V +  + APEI+ 
Sbjct: 127 DLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYT--------HEVVTLWYRAPEILL 175

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI 250
                    Y    D+WSLG +   ++     F G+   D  ++   T     E+++  +
Sbjct: 176 -----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230

Query: 251 QQGIAHRDLKPE 262
                ++   P+
Sbjct: 231 TSMPDYKPSFPK 242

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 1e-25
 Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 34/184 (18%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L H  + GI +RD+K ENIL    D    V L DF L      + +  +           
Sbjct: 142 LEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAY-------DFC 191

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E+MAP+IV        SG+DK  D WSLGV++Y LL G  PF  +  ++        
Sbjct: 192 GTIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-------- 239

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKH 420
                      I +            +S  AKDLI+RLL+KD +KRL      A  + +H
Sbjct: 240 -------SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292

Query: 421 PWIS 424
            +  
Sbjct: 293 LFFQ 296

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.1 bits (225), Expect = 1e-20
 Identities = 54/229 (23%), Positives = 83/229 (36%), Gaps = 62/229 (27%)

Query: 49  YRLKGEILGKGAYASV---QTCVNILTELEYAVKIIDKLP----GHSRSRVFKEVETFHH 101
           + L  ++LG GAY  V   +      T   YA+K++ K        +      E +   H
Sbjct: 26  FEL-LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 102 CQGHPNIIQLLEYYEDDEN----------------------------------------H 121
            +  P ++ L   ++ +                                          H
Sbjct: 85  IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 144

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
                I +RD+K ENIL    D    V L DF L      + +  +           G+ 
Sbjct: 145 LHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAY-------DFCGTI 194

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
           E+MAP+IV        SG+DK  D WSLGV++Y LL G  PF  +  ++
Sbjct: 195 EYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 239

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  104 bits (261), Expect = 2e-25
 Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 35/199 (17%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           L +    GI HRD+KP N++  H      ++L D+ L          +           V
Sbjct: 142 LDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYN---------VRV 190

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN------------ 353
            S  F  PE++  +       YD   D+WSLG ++  ++    PF+              
Sbjct: 191 ASRYFKGPELLVDYQM-----YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 245

Query: 354 -CGEDCGWQRGETCHACQEILFHSI------QQGHYDFPEGEWSTISDEAKDLIRRLLVK 406
             G +  +   +  +   +  F+ I      ++            +S EA D + +LL  
Sbjct: 246 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY 305

Query: 407 DARKRLSAASVLKHPWIST 425
           D + RL+A   ++HP+  T
Sbjct: 306 DHQSRLTAREAMEHPYFYT 324

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  102 bits (254), Expect = 1e-24
 Identities = 47/219 (21%), Positives = 80/219 (36%), Gaps = 59/219 (26%)

Query: 46  QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
           QD Y+L    LG+G Y+ V   +NI    +  VKI+       + ++ +E++   + +G 
Sbjct: 34  QDDYQL-VRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGG 89

Query: 106 PNIIQLLEYYEDDENHE---------------------------------------RHKR 126
           PNII L +  +D  +                                             
Sbjct: 90  PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 149

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I HRD+KP N++  H      ++L D+ L          +           V S  F  P
Sbjct: 150 IMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYHPGQEYN---------VRVASRYFKGP 198

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
           E++  +       YD   D+WSLG ++  ++    PF+ 
Sbjct: 199 ELLVDYQM-----YDYSLDMWSLGCMLASMIFRKEPFFH 232

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 5e-25
 Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            H   EI+    +  IAHRDLK +NIL     +     + D  L       T        
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPN 170

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                 VG+  +MAPE+++  +  +     KR D++++G+V + +         +     
Sbjct: 171 ----HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226

Query: 359 GWQRGETCHACQEILFHSIQQGHYD--FPEGEWST-ISDEAKDLIRRLLVKDARKRLSAA 415
            +          E +   + +       P    S         ++R     +   RL+A 
Sbjct: 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL 286

Query: 416 SVLK 419
            + K
Sbjct: 287 RIKK 290

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 4e-24
 Identities = 44/276 (15%), Positives = 77/276 (27%), Gaps = 65/276 (23%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ-GHPN 107
             L+ E +GKG +  V          E AVKI            F+E E +      H N
Sbjct: 5   IVLQ-ESIGKGRFGEVWRGK--WRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 58

Query: 108 IIQLLEYYEDDEN----------------------------------------------- 120
           I+  +     D                                                 
Sbjct: 59  ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHM 118

Query: 121 ----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
                +    IAHRDLK +NIL     +     + D  L       T             
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPN----H 171

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 236
            VG+  +MAPE+++  +  +     KR D++++G+V + +         +      +   
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231

Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQL 272
                  E +   + +     ++      C     +
Sbjct: 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 5e-25
 Identities = 47/239 (19%), Positives = 86/239 (35%), Gaps = 32/239 (13%)

Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAH 256
           +D       L +V          ++ +C  D   +         ++   L     + + H
Sbjct: 67  HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE--IVKSFLFQLLKGLGFCHSRNVLH 124

Query: 257 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 316
           RDLKP+N+L     +   +KL +F L          +S          V +  +  P+++
Sbjct: 125 RDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAE--------VVTLWYRPPDVL 173

Query: 317 NAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCGWQRGETCHACQEILFH 375
                  A  Y    D+WS G +   L     P F GN  +D   +         E  + 
Sbjct: 174 F-----GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 376 SIQQGHYDFPEGEW----------STISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
           S+ +     P   +            ++   +DL++ LL  +  +R+SA   L+HP+ S
Sbjct: 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (215), Expect = 1e-19
 Identities = 41/218 (18%), Positives = 69/218 (31%), Gaps = 60/218 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHP 106
           Y    E +G+G Y +V    N  T    A+K +  D       S   +E+      + H 
Sbjct: 4   YEK-LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HK 61

Query: 107 NIIQLLEYYEDDEN----------------------------------------HERHKR 126
           NI++L +    D+                                             + 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRDLKP+N+L     +   +KL +F L          +S          V +  +  P
Sbjct: 122 VLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAE--------VVTLWYRPP 170

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
           +++       A  Y    D+WS G +   L     P +
Sbjct: 171 DVLF-----GAKLYSTSIDMWSAGCIFAELANAGRPLF 203

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  103 bits (258), Expect = 8e-25
 Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 48/216 (22%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
             +     + +RDLKPEN+L         +++ DF     +K  T            T  
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKGRTW-----------TLC 199

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+ E +APEI+       + GY+K  D W+LGV++Y +  GYPPF+ +            
Sbjct: 200 GTPEALAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-------- 245

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKH 420
                  ++  I  G   FP    S  S + KDL+R LL  D  KR          +  H
Sbjct: 246 -------IYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294

Query: 421 PWIST---AGTAHRPLVTPQVIRRNQSARELSSFAE 453
            W +T        R +     I + +   + S+F +
Sbjct: 295 KWFATTDWIAIYQRKV-EAPFIPKFKGPGDTSNFDD 329

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.8 bits (240), Expect = 2e-22
 Identities = 56/252 (22%), Positives = 93/252 (36%), Gaps = 66/252 (26%)

Query: 18  KSNAERIEEARNKRRRKKTATSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYA 77
           +S  E + +A+    +K    S  T+     +    + LG G++  V    +  +   YA
Sbjct: 13  ESVKEFLAKAKEDFLKKWETPSQNTAQLDQ-FDR-IKTLGTGSFGRVMLVKHKESGNHYA 70

Query: 78  VKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYED----------------- 117
           +KI+DK              E          P +++L   ++D                 
Sbjct: 71  MKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129

Query: 118 ---------DENHERH--------------KRIAHRDLKPENILCVHPDQLSPVKLCDFD 154
                     E H R                 + +RDLKPEN+L         +++ DF 
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY---IQVTDFG 186

Query: 155 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 214
               +K  T            T  G+ E +APEI+       + GY+K  D W+LGV++Y
Sbjct: 187 FAKRVKGRTW-----------TLCGTPEALAPEII------LSKGYNKAVDWWALGVLIY 229

Query: 215 ILLCGYPPFYGN 226
            +  GYPPF+ +
Sbjct: 230 EMAAGYPPFFAD 241

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (252), Expect = 2e-24
 Identities = 40/248 (16%), Positives = 73/248 (29%), Gaps = 50/248 (20%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           + YRL G  +G G++  +    +I    E A+K+          ++  E + +   QG  
Sbjct: 7   NRYRL-GRKIGSGSFGDIYLGTDIAAGEEVAIKLECV--KTKHPQLHIESKIYKMMQGGV 63

Query: 107 NIIQLLEYYEDDEN---------------------------------------HERHKR- 126
            I  +     + +                                           H + 
Sbjct: 64  GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
             HRD+KP+N L     + + V + DF L    + +   H  +         G+A + + 
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR-DARTHQHIPYRENKNLTGTARYASI 182

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
                          +R DL SLG V+     G  P+ G        +            
Sbjct: 183 NTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 236

Query: 247 FHSIQQGI 254
              + +G 
Sbjct: 237 IEVLCKGY 244

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.2 bits (241), Expect = 5e-23
 Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 21/182 (11%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + +   +   HRD+KP+N L     + + V + DF L    + +   H  +         
Sbjct: 116 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR-DARTHQHIPYRENKNLT 174

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
           G+A + +                +R DL SLG V+     G  P+ G             
Sbjct: 175 GTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT-------- 220

Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV---LKHPW 422
               ++      ++      E        E    +          +   + +    ++ +
Sbjct: 221 ---KRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277

Query: 423 IS 424
             
Sbjct: 278 HR 279

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 4e-24
 Identities = 49/241 (20%), Positives = 83/241 (34%), Gaps = 34/241 (14%)

Query: 199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIA 255
                         VY++         N  +              +I   L +     I 
Sbjct: 84  DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRDLKP N+     ++   +K+ DF L        +             V +  + APEI
Sbjct: 144 HRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT-----------GYVATRWYRAPEI 189

Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGETCH 367
           +          Y++  D+WS+G ++  LL G   F G    D         G    E   
Sbjct: 190 M-----LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 244

Query: 368 ACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
                   +  Q     P+  ++ +    +  A DL+ ++LV D+ KR++AA  L H + 
Sbjct: 245 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

Query: 424 S 424
           +
Sbjct: 305 A 305

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 6e-19
 Identities = 48/228 (21%), Positives = 77/228 (33%), Gaps = 67/228 (29%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
             + Y+     +G GAY SV    +  T L  AVK + +         R ++E+    H 
Sbjct: 16  VPERYQN-LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 103 QGHPNIIQLLEYYEDDENHERH-------------------------------------- 124
           + H N+I LL+ +    + E                                        
Sbjct: 75  K-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133

Query: 125 ------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
                   I HRDLKP N+     ++   +K+ DF L        +             V
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDEMT-----------GYV 179

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
            +  + APEI+          Y++  D+WS+G ++  LL G   F G 
Sbjct: 180 ATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 5e-24
 Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 31/187 (16%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
             GI HRDLKP N+     ++   +K+ DF L           +  A   +   V +  +
Sbjct: 139 AAGIIHRDLKPGNLAV---NEDCELKILDFGL-----------ARQADSEMTGYVVTRWY 184

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQR 362
            APE++          Y +  D+WS+G ++  ++ G   F G+   D         G   
Sbjct: 185 RAPEVIL-----NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239

Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVL 418
            E     Q     +  +G  +  + ++++I    S  A +L+ ++LV DA +R++A   L
Sbjct: 240 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 299

Query: 419 KHPWIST 425
            HP+  +
Sbjct: 300 AHPYFES 306

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.8 bits (227), Expect = 7e-21
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 67/262 (25%)

Query: 45  FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
            + +YR   + +G GAY +V + V+  T  + A+K + +         R ++E+    H 
Sbjct: 16  VRAVYRD-LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 74

Query: 103 QGHPNIIQLLEYYEDDENHE--------------------RHKRI--------------- 127
           + H N+I LL+ +  DE  +                    +H+++               
Sbjct: 75  R-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 133

Query: 128 ---------AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
                     HRDLKP N+     ++   +K+ DF L           +  A   +   V
Sbjct: 134 LRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL-----------ARQADSEMTGYV 179

Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
            +  + APE++          Y +  D+WS+G ++  ++ G   F G+   D   +  + 
Sbjct: 180 VTRWYRAPEVIL-----NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 234

Query: 239 CHACQEILFHSIQQGIAHRDLK 260
                      +Q   A   +K
Sbjct: 235 TGTPPAEFVQRLQSDEAKNYMK 256

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 96.3 bits (238), Expect = 3e-22
 Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 47/260 (18%)

Query: 224 YGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP-VKLCDFDL 282
           Y + G    + +  +      + +   + GI H D+KPEN+L    D     +++   DL
Sbjct: 117 YEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 176

Query: 283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYI 342
           G+   ++               + + E+ +PE++        + +    D+WS   +++ 
Sbjct: 177 GNACWYDEHYT---------NSIQTREYRSPEVL------LGAPWGCGADIWSTACLIFE 221

Query: 343 LLCGYPPFYGNCGEDCGW---QRGETCHACQEILFHSIQQGHYDFPEGE----------- 388
           L+ G   F  + G           +      E+  + ++ G Y                 
Sbjct: 222 LITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKL 281

Query: 389 ---------------WSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
                              + E  D +  +L  D RKR  A  ++ HPW+    T     
Sbjct: 282 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK--DTLGMEE 339

Query: 434 VTPQVIRRNQSARELSSFAE 453
           +         S  ++  + E
Sbjct: 340 IRVPDRELYGSGSDIPGWFE 359

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.8 bits (198), Expect = 4e-17
 Identities = 46/291 (15%), Positives = 93/291 (31%), Gaps = 75/291 (25%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---------RVFKEVETF 99
           Y L    LG G +++V    +++     A+KI+     ++ +         RV     T 
Sbjct: 15  YIL-VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 100 HHCQGHPNIIQLLEYYEDDENHERHKR--------------------------------- 126
               G  +I++LL+++     +  H                                   
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 127 -------------IAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATP 172
                        I H D+KPEN+L    D     +++   DLG+   ++          
Sbjct: 134 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT------ 187

Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 232
                + + E+ +PE++        + +    D+WS   +++ L+ G   F  + G    
Sbjct: 188 ---NSIQTREYRSPEVL------LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 238

Query: 233 W---QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF 280
                  +      E+  + ++ G   R       L  +  +L    L D 
Sbjct: 239 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDV 289

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.4 bits (236), Expect = 5e-22
 Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 42/218 (19%)

Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
           HRDLKP NI+         +K+ DF L      +  +            V +  + APE+
Sbjct: 142 HRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMT---------PYVVTRYYRAPEV 189

Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN------------CGEDCGWQRG 363
           +         GY +  D+WS+G ++  ++     F G              G  C     
Sbjct: 190 ILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243

Query: 364 ETCHACQEILFHSIQQGHYDFPE-----------GEWSTISDEAKDLIRRLLVKDARKRL 412
           +     +  + +  +     FP+                 + +A+DL+ ++LV D  KR+
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303

Query: 413 SAASVLKHPWISTAGT-AHRPLVTPQVIRRNQSARELS 449
           S    L+HP+I+     A      PQ+  +    RE +
Sbjct: 304 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHT 341

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 2e-16
 Identities = 43/227 (18%), Positives = 75/227 (33%), Gaps = 65/227 (28%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
           Y+   + +G GA   V    + + +   A+K + +         R ++E+        H 
Sbjct: 19  YQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HK 76

Query: 107 NIIQLLEYYEDDE---------------------------NHERHKRIA----------- 128
           NII LL  +   +                           +HER   +            
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136

Query: 129 -----HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
                HRDLKP NI+         +K+ DF L      +  +            V +  +
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMT---------PYVVTRYY 184

Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
            APE++         GY +  D+WS+G ++  ++     F G    D
Sbjct: 185 RAPEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 7e-22
 Identities = 34/219 (15%), Positives = 65/219 (29%), Gaps = 60/219 (27%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
            + +G G +  V     +  + + A+K I +    S     +E E       HP ++QL 
Sbjct: 10  VQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGA-MSEEDFIEEAEVMMKLS-HPKLVQLY 66

Query: 113 EYYEDDEN-----------------------------------------HERHKRIAHRD 131
               +                                            +     + HRD
Sbjct: 67  GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           L   N L     +   +K+ DF +   +  +    S              ++ +PE+ + 
Sbjct: 127 LAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSST-------GTKFPVKWASPEVFSF 176

Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                 S Y  + D+WS GV+++ +       Y N    
Sbjct: 177 ------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS 209

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 5e-21
 Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 33/182 (18%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
           C    E + +  +  + HRDL   N L     +   +K+ DF +   +  +    S    
Sbjct: 107 CLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSST--- 160

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
                     ++ +PE+ +       S Y  + D+WS GV+++ +       Y N     
Sbjct: 161 ----GTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

Query: 359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
                         +   I  G   +        S     ++     +    R + + +L
Sbjct: 211 --------------VVEDISTGFRLYK---PRLASTHVYQIMNHCWKERPEDRPAFSRLL 253

Query: 419 KH 420
           + 
Sbjct: 254 RQ 255

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 2e-21
 Identities = 38/202 (18%), Positives = 68/202 (33%), Gaps = 38/202 (18%)

Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
              E  H     + +  +    HRDL   N+L V        K+ DF L   ++ + + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 164

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
                          ++ APE +N         +  + D+WS GV+++     G  P+ G
Sbjct: 165 K-----AQTHGKWPVKWYAPECINY------YKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213

Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKR 411
             G +               +   +++G     P G       E  DL+      D   R
Sbjct: 214 MKGSE---------------VTAMLEKGERMGCPAG----CPREMYDLMNLCWTYDVENR 254

Query: 412 LSAASV---LKHPWISTAGTAH 430
              A+V   L++ +       H
Sbjct: 255 PGFAAVELRLRNYYYDVVNEGH 276

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.9 bits (217), Expect = 6e-20
 Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 59/227 (25%)

Query: 48  LYRLKGEILGKGAYASVQTCVNILTEL--EYAVKIIDK--LPGHSRSRVFKEVETFHHCQ 103
           L  L+ + LG G + +V+     + ++    AVKI+         +  +  E        
Sbjct: 7   LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66

Query: 104 GHPNIIQLLEYYEDDE---------------------------------------NHERH 124
            +P I++++   E +                                         +   
Sbjct: 67  -NPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 125

Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
               HRDL   N+L V        K+ DF L   ++ + + +               ++ 
Sbjct: 126 SNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYYK-----AQTHGKWPVKWY 177

Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED 230
           APE +N         +  + D+WS GV+++     G  P+ G  G +
Sbjct: 178 APECIN------YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 2e-21
 Identities = 33/234 (14%), Positives = 70/234 (29%), Gaps = 38/234 (16%)

Query: 204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLK 260
                + +V   +  G    +         +  +      +I   + +  +    HRDL+
Sbjct: 81  VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 140

Query: 261 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 320
             NIL     +    K+ DF L   I+ N                   ++ APE      
Sbjct: 141 AANILV---GENLVCKVADFGLARLIEDNEYTARQ-------GAKFPIKWTAPEAALY-- 188

Query: 321 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG 380
                 +  + D+WS G+++  L       Y                  +E+L    +  
Sbjct: 189 ----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------------REVLDQVERGY 231

Query: 381 HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK--HPWISTAGTAHRP 432
               P        +   DL+ +   K+  +R +   +      + ++    ++P
Sbjct: 232 RMPCPPE----CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP 281

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 1e-19
 Identities = 38/224 (16%), Positives = 64/224 (28%), Gaps = 62/224 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
            RL    LG+G +  V       T    A+K +      S     +E +     + H  +
Sbjct: 19  LRL-EVKLGQGCFGEVWMGTWNGTT-RVAIKTLKP-GTMSPEAFLQEAQVMKKLR-HEKL 74

Query: 109 IQLLEYYEDDE-----------------------------------------NHERHKRI 127
           +QL     ++                                           +      
Sbjct: 75  VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134

Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
            HRDL+  NIL     +    K+ DF L   I+ N                   ++ APE
Sbjct: 135 VHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQ-------GAKFPIKWTAPE 184

Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED 230
                       +  + D+WS G+++  L   G  P+ G    +
Sbjct: 185 AALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE 222

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 6e-21
 Identities = 41/250 (16%), Positives = 78/250 (31%), Gaps = 40/250 (16%)

Query: 213 VYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHP 269
           +  L+                      + C +I   + +   + + HRDL   N+L    
Sbjct: 88  ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV--- 144

Query: 270 DQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK 329
                VK+ DF L   +      +               ++MA E +          Y  
Sbjct: 145 KTPQHVKITDFGLAKLLGAEEKEYH------AEGGKVPIKWMALESILH------RIYTH 192

Query: 330 RCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEG 387
           + D+WS GV V+ L+  G  P+ G    +               +   +++G     P  
Sbjct: 193 QSDVWSYGVTVWELMTFGSKPYDGIPASE---------------ISSILEKGERLPQPPI 237

Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTPQVIRRNQSARE 447
                + +   ++ +  + DA  R     ++       A    R LV     R +  +  
Sbjct: 238 ----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS-KMARDPQRYLVIQGDERMHLPSPT 292

Query: 448 LSSFAESAMS 457
            S+F  + M 
Sbjct: 293 DSNFYRALMD 302

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 8e-20
 Identities = 39/221 (17%), Positives = 68/221 (30%), Gaps = 62/221 (28%)

Query: 52  KGEILGKGAYASVQTCVNILTELEYAVKIIDK-----LPGHSRSRVFKEVETFHHCQGHP 106
           K ++LG GA+ +V   + I    +  + +  K         +   +  E         +P
Sbjct: 13  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NP 71

Query: 107 NIIQLLEYYEDDE----------------------------------------NHERHKR 126
           ++ +LL                                               N+   +R
Sbjct: 72  HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           + HRDL   N+L         VK+ DF L   +      +               ++MA 
Sbjct: 132 LVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYH------AEGGKVPIKWMAL 182

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGN 226
           E +          Y  + D+WS GV V+ L+  G  P+ G 
Sbjct: 183 ESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.2 bits (223), Expect = 1e-20
 Identities = 55/372 (14%), Positives = 100/372 (26%), Gaps = 111/372 (29%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
            +++G+G +  V         L     I       S+                       
Sbjct: 15  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK----------------------- 51

Query: 113 EYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
              +D  +      +  +     NI          + L       G  +           
Sbjct: 52  ---DDHRDFAGELEVLCKLGHHPNI----------INLLGACEHRGYLY----------- 87

Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 232
                          +   +            +L    +    +L   P F         
Sbjct: 88  ---------------LAIEYA--------PHGNLLDF-LRKSRVLETDPAFAIANSTAST 123

Query: 233 WQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
               +  H   ++   + +  Q+   HRDL   NIL     +    K+ DF L  G +  
Sbjct: 124 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVY 180

Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYP 348
                               +MA E +N       S Y    D+WS GV+++ ++  G  
Sbjct: 181 VKKT---------MGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGT 225

Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
           P+ G    +               L+  + QG   +   +     DE  DL+R+   +  
Sbjct: 226 PYCGMTCAE---------------LYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKP 267

Query: 409 RKRLSAASVLKH 420
            +R S A +L  
Sbjct: 268 YERPSFAQILVS 279

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 5e-20
 Identities = 35/222 (15%), Positives = 66/222 (29%), Gaps = 69/222 (31%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
            + +GKG +  V          + AVK I      +      E       + H N++QLL
Sbjct: 12  LQTIGKGEFGDVMLG--DYRGNKVAVKCIKN--DATAQAFLAEASVMTQLR-HSNLVQLL 66

Query: 113 EYYEDDEN-------------------------------------------HERHKRIAH 129
               +++                                            +       H
Sbjct: 67  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 126

Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
           RDL   N+L     + +  K+ DF             +  A+    T     ++ APE +
Sbjct: 127 RDLAARNVLV---SEDNVAKVSDFG-----------LTKEASSTQDTGKLPVKWTAPEAL 172

Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGED 230
                     +  + D+WS G++++ +   G  P+     +D
Sbjct: 173 RE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 208

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 5e-20
 Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 41/177 (23%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + +       HRDL   N+L     + +  K+ DF             +  A+    T  
Sbjct: 116 MEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFG-----------LTKEASSTQDTGK 161

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRGE 364
              ++ APE +          +  + D+WS G++++ +   G  P+     +D       
Sbjct: 162 LPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------- 208

Query: 365 TCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
                   +   +++G+  D P+G          ++++     DA  R S   + + 
Sbjct: 209 --------VVPRVEKGYKMDAPDG----CPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 5e-20
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 30/188 (15%)

Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
                      + +     +   HRDL   N +    D+   VK+ DF L   +      
Sbjct: 130 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFD 186

Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
                T          ++MA E +      +   +  + D+WS GV+++ L+    P Y 
Sbjct: 187 SVHNKT----GAKLPVKWMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236

Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
           +                 +I  + +Q      PE       D   +++ +     A  R 
Sbjct: 237 DVNT-------------FDITVYLLQGRRLLQPEY----CPDPLYEVMLKCWHPKAEMRP 279

Query: 413 SAASVLKH 420
           S + ++  
Sbjct: 280 SFSELVSR 287

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 6e-20
 Identities = 39/220 (17%), Positives = 70/220 (31%), Gaps = 60/220 (27%)

Query: 53  GEILGKGAYASVQTCVNIL---TELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHPNI 108
            E++G+G +  V     +     ++  AVK ++++      S+   E         HPN+
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNV 90

Query: 109 IQLLEYYEDDENH------------------------------------------ERHKR 126
           + LL      E                                               K+
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 150

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
             HRDL   N +    D+   VK+ DF L   +           T          ++MA 
Sbjct: 151 FVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKT----GAKLPVKWMAL 203

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
           E +      +   +  + D+WS GV+++ L+    P Y +
Sbjct: 204 ESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.3 bits (218), Expect = 6e-20
 Identities = 39/230 (16%), Positives = 69/230 (30%), Gaps = 60/230 (26%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILT---ELEYAVKIIDK-LPGHSRSRVFKEVETFHHC 102
              ++  +++G G +  V +    L    E+  A+K +        R     E       
Sbjct: 26  SCVKI-EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF 84

Query: 103 QGHPNIIQLLEYYEDDEN-----------------------------------------H 121
             HPN+I L                                                  +
Sbjct: 85  D-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 143

Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
                  HRDL   NIL          K+ DF L   ++ +TS  +  +    L      
Sbjct: 144 LADMNYVHRDLAARNILVNSNLV---CKVSDFGLSRFLEDDTSDPTYTSA---LGGKIPI 197

Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
            + APE +          +    D+WS G+V++ ++  G  P++    +D
Sbjct: 198 RWTAPEAIQY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 241

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.1 bits (215), Expect = 2e-19
 Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 34/213 (15%)

Query: 212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVH 268
           ++   +            D  +   +     + I   + +       HRDL   NIL   
Sbjct: 104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS 163

Query: 269 PDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD 328
                  K+ DF L   ++ +TS  +  +    L       + APE +          + 
Sbjct: 164 NLV---CKVSDFGLSRFLEDDTSDPTYTSA---LGGKIPIRWTAPEAIQY------RKFT 211

Query: 329 KRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
              D+WS G+V++ ++  G  P++    +D               + ++I+Q +   P  
Sbjct: 212 SASDVWSYGIVMWEVMSYGERPYWDMTNQD---------------VINAIEQDYRLPP-- 254

Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
                      L+     KD   R     ++  
Sbjct: 255 -PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.9 bits (217), Expect = 1e-19
 Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 33/171 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            +   HRDL   N+L  H      VK+CDF L   I  +++                 ++
Sbjct: 182 FKSCVHRDLAARNVLVTHGKV---VKICDFGLARDIMSDSNYVVRG------NARLPVKW 232

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHAC 369
           MAPE +          Y  + D+WS G++++ I   G  P+ G   +             
Sbjct: 233 MAPESLFE------GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA------------ 274

Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
               F+ + Q  +   +  +   ++E   +++     D+RKR S  ++   
Sbjct: 275 ---NFYKLIQNGFKMDQPFY--ATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 1e-12
 Identities = 45/243 (18%), Positives = 73/243 (30%), Gaps = 85/243 (34%)

Query: 53  GEILGKGAYASVQTCVNILTE-----LEYAVKIIDKLPGHS-RSRVFKEVET----FHH- 101
           G++LG GA+  V              ++ AVK++ +    S R  +  E++       H 
Sbjct: 42  GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 101

Query: 102 --------CQGHPNIIQLLEYYEDDENHER------------------------------ 123
                   C     I  + EY    +                                  
Sbjct: 102 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 161

Query: 124 --------------------HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT 163
                                K   HRDL   N+L  H      VK+CDF L   I  ++
Sbjct: 162 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV---VKICDFGLARDIMSDS 218

Query: 164 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPP 222
           +                 ++MAPE +          Y  + D+WS G++++ I   G  P
Sbjct: 219 NYVVR------GNARLPVKWMAPESLF------EGIYTIKSDVWSYGILLWEIFSLGVNP 266

Query: 223 FYG 225
           + G
Sbjct: 267 YPG 269

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.3 bits (213), Expect = 1e-19
 Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 61/215 (28%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
            + LG G +  V+       + + A+K+I +    S     +E +   +   H  ++QL 
Sbjct: 9   LKELGTGQFGVVKYGKW-RGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLS-HEKLVQLY 65

Query: 113 EYYEDDEN-----------------------------------------HERHKRIAHRD 131
                                                            +   K+  HRD
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 125

Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
           L   N L         VK+ DF L   +  +    S       +       +  PE++  
Sbjct: 126 LAARNCLVNDQGV---VKVSDFGLSRYVLDDEYTSS-------VGSKFPVRWSPPEVL-- 173

Query: 192 FMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
                 S +  + D+W+ GV+++ I   G  P+  
Sbjct: 174 ----MYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 204

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-19
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 35/189 (18%)

Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
            Q  E C    E + +   +   HRDL   N L         VK+ DF L   +  +   
Sbjct: 100 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEYT 156

Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFY 351
            S       +       +  PE++        S +  + D+W+ GV+++ I   G  P+ 
Sbjct: 157 SS-------VGSKFPVRWSPPEVL------MYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
                +                   I QG   +        S++   ++     + A +R
Sbjct: 204 RFTNSE---------------TAEHIAQGLRLYRP---HLASEKVYTIMYSCWHEKADER 245

Query: 412 LSAASVLKH 420
            +   +L +
Sbjct: 246 PTFKILLSN 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 1e-19
 Identities = 38/226 (16%), Positives = 65/226 (28%), Gaps = 62/226 (27%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
           +  +L  E LG G +  V          + AVK + +    S      E       Q H 
Sbjct: 13  ETLKL-VERLGAGQFGEVWMGYYN-GHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQ-HQ 68

Query: 107 NIIQLLEYYEDDE-----------------------------------------NHERHK 125
            +++L      +                                               +
Sbjct: 69  RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128

Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
              HRDL+  NIL          K+ DF L   I+ N                   ++ A
Sbjct: 129 NYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYTARE-------GAKFPIKWTA 178

Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED 230
           PE +N         +  + D+WS G+++  ++  G  P+ G    +
Sbjct: 179 PEAINY------GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-18
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 35/188 (18%)

Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
            +  +      E +    ++   HRDL+  NIL          K+ DF L   I+ N   
Sbjct: 109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS---CKIADFGLARLIEDNEYT 165

Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFY 351
                           ++ APE +N         +  + D+WS G+++  ++  G  P+ 
Sbjct: 166 ARE-------GAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTHGRIPYP 212

Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
           G    +               +  ++++G+            +E   L+R    +    R
Sbjct: 213 GMTNPE---------------VIQNLERGYRMVR---PDNCPEELYQLMRLCWKERPEDR 254

Query: 412 LSAASVLK 419
            +   +  
Sbjct: 255 PTFDYLRS 262

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 4e-19
 Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 38/198 (19%)

Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
              E  H     + +  ++   HRDL   N+L          K+ DF L   +  + S +
Sbjct: 110 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYY 166

Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
           +  +           ++ APE +N         +  R D+WS GV ++  L  G  P+  
Sbjct: 167 TARSAG-----KWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKK 215

Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKR 411
             G +               +   I+QG   + P         E   L+    +     R
Sbjct: 216 MKGPE---------------VMAFIEQGKRMECPPE----CPPELYALMSDCWIYKWEDR 256

Query: 412 LSAASV---LKHPWISTA 426
               +V   ++  + S A
Sbjct: 257 PDFLTVEQRMRACYYSLA 274

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 4e-18
 Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 59/219 (26%)

Query: 56  LGKGAYASVQTCVNILT--ELEYAVKIIDK-LPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
           LG G + SV+  V  +   +++ A+K++ +         + +E +  H    +P I++L+
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLI 75

Query: 113 EYYEDDE----------------------------------------NHERHKRIAHRDL 132
              + +                                          +   K   HRDL
Sbjct: 76  GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135

Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
              N+L          K+ DF L   +  + S ++  +           ++ APE +N  
Sbjct: 136 AARNVLL---VNRHYAKISDFGLSKALGADDSYYTARS-----AGKWPLKWYAPECIN-- 185

Query: 193 MGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
                  +  R D+WS GV ++  L  G  P+    G +
Sbjct: 186 ----FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 220

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.3 bits (210), Expect = 5e-19
 Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 36/176 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + +  ++   HRDL   N L     +   VK+ DF L        +++S           
Sbjct: 153 MAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSR------NIYSADYYKADGNDA 203

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGE 364
               +M PE +          Y    D+W+ GVV++ +   G  P+YG   E+       
Sbjct: 204 IPIRWMPPESIFYNR------YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE------- 250

Query: 365 TCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                   + + ++ G+    PE        E  +L+R    K    R S  S+ +
Sbjct: 251 --------VIYYVRDGNILACPEN----CPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.9 bits (152), Expect = 2e-11
 Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 16/111 (14%)

Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
           +   ++  HRDL   N L     +   VK+ DF L        +++S             
Sbjct: 155 YLSERKFVHRDLATRNCLV---GENMVVKIADFGLSR------NIYSADYYKADGNDAIP 205

Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED 230
             +M PE +          Y    D+W+ GVV++ +   G  P+YG   E+
Sbjct: 206 IRWMPPESIFYNR------YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 250

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 6e-19
 Identities = 47/229 (20%), Positives = 77/229 (33%), Gaps = 63/229 (27%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTE---LEYAVKIIDKLPGHS-RSRVFKEVETFHHC 102
           +   L G  +G+G +  V   + +  E   L  A+K        S R +  +E  T    
Sbjct: 7   ERIEL-GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65

Query: 103 QGHPNIIQLLEYYEDDE----------------------------------------NHE 122
             HP+I++L+    ++                                          + 
Sbjct: 66  D-HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124

Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             KR  HRD+   N+L         VKL DF L   ++ +T   +              +
Sbjct: 125 ESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKAS-------KGKLPIK 174

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
           +MAPE +N         +    D+W  GV ++ IL+ G  PF G    D
Sbjct: 175 WMAPESIN------FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 9e-19
 Identities = 35/184 (19%), Positives = 58/184 (31%), Gaps = 37/184 (20%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
            +     L +   +   HRD+   N+L         VKL DF L   ++ +T   +    
Sbjct: 114 AYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKAS--- 167

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 357
                     ++MAPE +N         +    D+W  GV ++ IL+ G  PF G    D
Sbjct: 168 ----KGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217

Query: 358 CGWQRGETCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
                          +   I+ G     P             L+ +    D  +R     
Sbjct: 218 ---------------VIGRIENGERLPMPPN----CPPTLYSLMTKCWAYDPSRRPRFTE 258

Query: 417 VLKH 420
           +   
Sbjct: 259 LKAQ 262

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (207), Expect = 1e-18
 Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 32/183 (17%)

Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
                E + +   +   HRDL   N+L    D    VK+ DF L   +  N   +     
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYV---- 169

Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED 357
            +         + APE +          +    D W  GV ++ +   G  P+ G  G  
Sbjct: 170 -MQEHRKVPFAWCAPESLKT------RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222

Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
                          + H I +     P         +  +++ +        R +  ++
Sbjct: 223 ---------------ILHKIDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265

Query: 418 LKH 420
              
Sbjct: 266 RDF 268

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 2e-18
 Identities = 45/229 (19%), Positives = 67/229 (29%), Gaps = 63/229 (27%)

Query: 49  YRLKGEILGKGAYASVQTCVNILT---ELEYAVKIIDK---LPGHSRSRVFKEVETFHHC 102
            RL  E LG G++  V+           +  AVK +         +     +EV   H  
Sbjct: 10  LRL-LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 103 QGHPNIIQLLEYYEDDE------------------NHERH-------------------- 124
             H N+I+L                           H+ H                    
Sbjct: 69  D-HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127

Query: 125 --KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
             KR  HRDL   N+L    D    VK+ DF L   +  N   +      +         
Sbjct: 128 ESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYV-----MQEHRKVPFA 179

Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGED 230
           + APE +          +    D W  GV ++ +   G  P+ G  G  
Sbjct: 180 WCAPESLKT------RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.2 bits (205), Expect = 3e-18
 Identities = 39/216 (18%), Positives = 61/216 (28%), Gaps = 60/216 (27%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLL 112
              LG G Y  V   V     L  AVK + +          KE       + HPN++QLL
Sbjct: 22  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIK-HPNLVQLL 79

Query: 113 EYYEDDENHERH------------------------------------------KRIAHR 130
                +                                                K   HR
Sbjct: 80  GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 139

Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
           DL   N L     +   VK+ DF L   +  +T                  ++ APE + 
Sbjct: 140 DLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAH-------AGAKFPIKWTAPESLA 189

Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                  + +  + D+W+ GV+++ +       Y  
Sbjct: 190 ------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.1 bits (184), Expect = 1e-15
 Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 35/170 (20%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
           ++   HRDL   N L     +   VK+ DF L   +  +T                  ++
Sbjct: 133 KKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAH-------AGAKFPIKW 182

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
            APE +        + +  + D+W+ GV+++ +       Y                   
Sbjct: 183 TAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------- 223

Query: 371 EILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
             ++  +++ +  + PEG      ++  +L+R     +   R S A + +
Sbjct: 224 -QVYELLEKDYRMERPEG----CPEKVYELMRACWQWNPSDRPSFAEIHQ 268

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 8e-18
 Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 36/177 (20%)

Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
           + +   +   HRDL   N+L    +    +K+ DF L   I                   
Sbjct: 148 MEYLASKKCIHRDLAARNVLVTEDNV---MKIADFGLARDIHHIDYYKK------TTNGR 198

Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 364
              ++MAPE +          Y  + D+WS GV+++ I   G  P+ G   E+       
Sbjct: 199 LPVKWMAPEAL------FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 245

Query: 365 TCHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
                   LF  +++GH  D P       ++E   ++R        +R +   +++ 
Sbjct: 246 --------LFKLLKEGHRMDKPSN----CTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 2e-14
 Identities = 48/249 (19%), Positives = 75/249 (30%), Gaps = 81/249 (32%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNILTE-------LEYAVKIIDK-LPGHSRSRVFKEVET 98
           D   L G+ LG+GA+  V     I  +        + AVK++         S +  E+E 
Sbjct: 13  DRLVL-GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEM 71

Query: 99  FHHCQGHPNIIQ-------------LLEYYEDDE-------------------------- 119
                 H NII              ++EY                               
Sbjct: 72  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 120 -----------------NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 162
                             +   K+  HRDL   N+L    +    +K+ DF L   I   
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV---MKIADFGLARDIHHI 188

Query: 163 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYP 221
                              ++MAPE +          Y  + D+WS GV+++ I   G  
Sbjct: 189 DYYKK------TTNGRLPVKWMAPEAL------FDRIYTHQSDVWSFGVLLWEIFTLGGS 236

Query: 222 PFYGNCGED 230
           P+ G   E+
Sbjct: 237 PYPGVPVEE 245

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 2e-17
 Identities = 39/235 (16%), Positives = 68/235 (28%), Gaps = 66/235 (28%)

Query: 38  TSLVTSCFQDLYRLKGEILGKGAYASVQTCVNILT----ELEYAVKIIDK-LPGHSRSRV 92
           T +  SC       + +++G G +  V   +   +    E+  A+K +        R   
Sbjct: 2   TEIHPSCVT-----RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF 56

Query: 93  FKEVETFHHCQGHPNIIQLLEYYEDDEN-------------------------------- 120
             E         H NII+L       +                                 
Sbjct: 57  LGEAGIMGQFS-HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 115

Query: 121 ---------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 171
                    +  +    HRDL   NIL    +     K+ DF L   ++       P AT
Sbjct: 116 LRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE-----DDPEAT 167

Query: 172 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
                      + APE ++         +    D+WS G+V++ ++      Y  
Sbjct: 168 YTTSGGKIPIRWTAPEAIS------YRKFTSASDVWSFGIVMWEVMTYGERPYWE 216

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 2e-16
 Identities = 30/211 (14%), Positives = 61/211 (28%), Gaps = 34/211 (16%)

Query: 212 VVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVH 268
           ++   +           +D  +   +     + I     +       HRDL   NIL   
Sbjct: 86  IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV-- 143

Query: 269 PDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD 328
            +     K+ DF L   ++       P AT           + APE ++         + 
Sbjct: 144 -NSNLVCKVSDFGLSRVLE-----DDPEATYTTSGGKIPIRWTAPEAISY------RKFT 191

Query: 329 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGE 388
              D+WS G+V++ ++      Y                   E++           P   
Sbjct: 192 SASDVWSFGIVMWEVMTYGERPYWELSN-------------HEVMKAINDGFRLPTPMD- 237

Query: 389 WSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
                     L+ +   ++  +R   A ++ 
Sbjct: 238 ---CPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 3e-16
 Identities = 37/209 (17%), Positives = 64/209 (30%), Gaps = 37/209 (17%)

Query: 216 LLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQL 272
            L    P   N          +      EI   + +       HRDL   N +       
Sbjct: 113 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT- 171

Query: 273 SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD 332
             VK+ DF +   I                  +    +M+PE +      +   +    D
Sbjct: 172 --VKIGDFGMTRDIYETDYYRKGG------KGLLPVRWMSPESL------KDGVFTTYSD 217

Query: 333 LWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWST 391
           +WS GVV++ I      P+ G   E              ++L   ++ G  D P+     
Sbjct: 218 VWSFGVVLWEIATLAEQPYQGLSNE--------------QVLRFVMEGGLLDKPDN---- 259

Query: 392 ISDEAKDLIRRLLVKDARKRLSAASVLKH 420
             D   +L+R     + + R S   ++  
Sbjct: 260 CPDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 6e-13
 Identities = 35/235 (14%), Positives = 63/235 (26%), Gaps = 73/235 (31%)

Query: 53  GEILGKGAYASV-----QTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGHP 106
              LG+G++  V     +  V    E   A+K +++      R     E           
Sbjct: 25  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH 83

Query: 107 NIIQLLEYYEDDEN---------------------------------------------- 120
           ++++LL      +                                               
Sbjct: 84  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 143

Query: 121 ----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
               +    +  HRDL   N +         VK+ DF +   I                 
Sbjct: 144 DGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYETDYYRKG------GK 194

Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
            +    +M+PE +      +   +    D+WS GVV++ I      P+ G   E 
Sbjct: 195 GLLPVRWMSPESL------KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 243

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 2e-15
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            +   HRDL   NIL     + + VK+CDF L   I  +                   ++
Sbjct: 152 SRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVR------KGDARLPLKW 202

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE +          Y  + D+WS GV+++ +       Y     D             
Sbjct: 203 MAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------------- 243

Query: 371 EILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
           E     +++G     P+      + E    +      +  +R + + +++H
Sbjct: 244 EEFCRRLKEGTRMRAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 3e-08
 Identities = 44/247 (17%), Positives = 73/247 (29%), Gaps = 79/247 (31%)

Query: 47  DLYRLKGEILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPGHSRSRVFKEVETF-- 99
           D  +L G+ LG+GA+  V            T    AVK++ +   HS  R          
Sbjct: 13  DRLKL-GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 71

Query: 100 ---HH----------CQGHPNIIQLLEYYEDDENHER----------------------- 123
              HH           +    ++ ++E+ +                              
Sbjct: 72  HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131

Query: 124 --------------------HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT 163
                                ++  HRDL   NIL     + + VK+CDF L   I  + 
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDP 188

Query: 164 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
                             ++MAPE +          Y  + D+WS GV+++ +       
Sbjct: 189 DYVR------KGDARLPLKWMAPETIF------DRVYTIQSDVWSFGVLLWEIFSLGASP 236

Query: 224 YGNCGED 230
           Y     D
Sbjct: 237 YPGVKID 243

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 4e-14
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 31/169 (18%)

Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
            +   HRDL   NIL  H       K+CDF L   IK +++        +        ++
Sbjct: 163 SKNCIHRDLAARNILLTHGRI---TKICDFGLARDIKNDSNYV------VKGNARLPVKW 213

Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
           MAPE +          Y    D+WS G+ ++ L       Y                   
Sbjct: 214 MAPESI------FNCVYTFESDVWSYGIFLWELFSLGSSPY--------------PGMPV 253

Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
           +  F+ + +  +     E      E  D+++     D  KR +   +++
Sbjct: 254 DSKFYKMIKEGFRMLSPEH--APAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 1e-09
 Identities = 39/237 (16%), Positives = 63/237 (26%), Gaps = 62/237 (26%)

Query: 49  YRLKGEILGKGAYASV-----QTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHC 102
               G+ LG GA+  V        +     +  AVK++        R  +  E++   + 
Sbjct: 25  LSF-GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 103 QGHPNIIQLLEYYEDDENH----------------ERHKRIAHRDLKPENILCVHPDQLS 146
             H NI+ LL                          R +           I+      L 
Sbjct: 84  GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 147 PVKLCDF--DLGSGIKF---NTSVHSPLATPLLL-------------------------- 175
              L  F   +  G+ F      +H  LA   +L                          
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203

Query: 176 --TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
                   ++MAPE +          Y    D+WS G+ ++ L       Y     D
Sbjct: 204 KGNARLPVKWMAPESI------FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 25/210 (11%), Positives = 49/210 (23%), Gaps = 70/210 (33%)

Query: 53  GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS----------RVFKEVETFHHC 102
           G+++G+G  ++V  C +     E  VK         +                       
Sbjct: 5   GKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63

Query: 103 Q-------GHPNIIQLLEYYEDDENHER-----------------------------HKR 126
           +           + ++  +  +    E                              H+ 
Sbjct: 64  EFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG 123

Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
           I H DL   N+L         + + DF        +  V       +L            
Sbjct: 124 IVHGDLSQYNVLVSEEG----IWIIDFPQ------SVEVGEEGWREIL--------ERDV 165

Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYIL 216
             +  +       Y    D+ S   +  IL
Sbjct: 166 RNIITYFS---RTYRTEKDINS--AIDRIL 190

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 19/140 (13%), Positives = 31/140 (22%), Gaps = 24/140 (17%)

Query: 204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPEN 263
                       +L                   E      E +     +GI H DL   N
Sbjct: 75  AVPKVYAWEGNAVLMELIDAKELYRVRVENPD-EVLDMILEEVAKFYHRGIVHGDLSQYN 133

Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
           +L         + + DF        +  V       +L              +  +    
Sbjct: 134 VLVSEEG----IWIIDFPQ------SVEVGEEGWREIL--------ERDVRNIITYFS-- 173

Query: 324 ASGYDKRCDLWSLGVVVYIL 343
              Y    D+ S   +  IL
Sbjct: 174 -RTYRTEKDINS--AIDRIL 190

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	539
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.76
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.75
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.75
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.75
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.75
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.74
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.74
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.74
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.74
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.73
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.72
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.71
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.71
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.71
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.7
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.7
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.69
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.69
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.69
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.69
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.68
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.68
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.67
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.67
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.66
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.66
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.66
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.65
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.65
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.64
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.64
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.64
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.63
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.63
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.62
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.62
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.62
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.62
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.62
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.62
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.61
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.6
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.59
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.59
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.59
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.58
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.58
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.57
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.57
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.56
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.56
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.55
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.54
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.49
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.49
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.49
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.49
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.48
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.48
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.47
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.4
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.42
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	86.47
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	86.4
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	86.06

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-53  Score=427.45  Aligned_cols=264  Identities=34%  Similarity=0.590  Sum_probs=189.2

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .+.|.|++ .+.||+|+||+||+|+++.+|+.||||++.+... .....+.+|+++|.++ +|||||+++++|+++...+
T Consensus         6 di~d~Y~~-~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~   83 (307)
T d1a06a_           6 DIRDIYDF-RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLY   83 (307)
T ss_dssp             CGGGTEEE-EEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             CCccceEE-EEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence            46778887 5789999999999999999999999999975432 2345677999999987 6999999999998776544


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +|.+-                 + +              .+...+.....++++.+.            
T Consensus        84 ---lv------mE~~~-----------------g-g--------------~L~~~l~~~~~l~e~~~~------------  110 (307)
T d1a06a_          84 ---LI------MQLVS-----------------G-G--------------ELFDRIVEKGFYTERDAS------------  110 (307)
T ss_dssp             ---EE------ECCCC-----------------S-C--------------BHHHHHHTCSCCCHHHHH------------
T ss_pred             ---EE------EeccC-----------------C-C--------------cHHHhhhcccCCCHHHHH------------
Confidence               12      22211                 1 0              111111000111111110            


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                   .+..|   ++.|+.|+|  ++||+||||||+|||+...+..+.+||+|||+
T Consensus       111 -----------------------------~~~~q---i~~al~ylH--~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~  156 (307)
T d1a06a_         111 -----------------------------RLIFQ---VLDAVKYLH--DLGIVHRDLKPENLLYYSLDEDSKIMISDFGL  156 (307)
T ss_dssp             -----------------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEESSSSTTCCEEECCC--
T ss_pred             -----------------------------HHHHH---HHHHHHhhh--hceeeeEEecccceeecccCCCceEEEeccce
Confidence                                         13445   778888888  99999999999999997666667899999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |+......         ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|.+||.+.+        
T Consensus       157 a~~~~~~~---------~~~~~~GT~~y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~--------  213 (307)
T d1a06a_         157 SKMEDPGS---------VLSTACGTPGYVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDEN--------  213 (307)
T ss_dssp             -------------------------CTTSCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------
T ss_pred             eEEccCCC---------eeeeeeeCccccCcHHHcC------CCCCcHHHhhhhhHHHHHHHhCCCCCCCCC--------
Confidence            97543222         2346799999999999963      579999999999999999999999998753        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                             ...+...|..+.+.++...|..+|++++|||.+||++||++|||++|+|+||||++.
T Consensus       214 -------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         214 -------DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             -------HHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             -------HHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence                   345778888999988888888999999999999999999999999999999999764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-53  Score=415.50  Aligned_cols=263  Identities=24%  Similarity=0.401  Sum_probs=187.8

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|-+.|++ .+.||+|+||+||+|+++.+|+.||||++++... ...+++.+|+++|+++ +|||||+++++++++...+
T Consensus         2 Pf~~dy~~-~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~   79 (271)
T d1nvra_           2 PFVEDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY   79 (271)
T ss_dssp             TTTTEEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             CCCcceEE-EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeE
Confidence            36677887 5789999999999999999999999999975432 2345688999999987 5999999999998765443


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|                       .+|.-+ +              .+...+.....++.+...            
T Consensus        80 ---iv-----------------------mEy~~g-g--------------~L~~~l~~~~~l~e~~~~------------  106 (271)
T d1nvra_          80 ---LF-----------------------LEYCSG-G--------------ELFDRIEPDIGMPEPDAQ------------  106 (271)
T ss_dssp             ---EE-----------------------EECCTT-E--------------EGGGGSBTTTBCCHHHHH------------
T ss_pred             ---EE-----------------------EeccCC-C--------------cHHHHHhcCCCCCHHHHH------------
Confidence               11                       122101 0              111111110001100000            


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                                                   .+.+|   ++.|+.|+|  ++||+||||||+|||++.   .+.+||+|||+
T Consensus       107 -----------------------------~i~~q---i~~al~ylH--~~~IiHrDiKp~NILl~~---~~~~KL~DFG~  149 (271)
T d1nvra_         107 -----------------------------RFFHQ---LMAGVVYLH--GIGITHRDIKPENLLLDE---RDNLKISDFGL  149 (271)
T ss_dssp             -----------------------------HHHHH---HHHHHHHHH--HTTEECSCCCGGGEEECT---TCCEEECCCTT
T ss_pred             -----------------------------HHHHH---HHHHHHHHH--HcCCccCcccHHHEEECC---CCCEEEccchh
Confidence                                         14455   778888888  999999999999999953   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |+........      ....+.+||+.|||||++.+     ...|+.++|||||||++|+|++|++||.+.....     
T Consensus       150 a~~~~~~~~~------~~~~~~~GT~~Y~APE~~~~-----~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~-----  213 (271)
T d1nvra_         150 ATVFRYNNRE------RLLNKMCGTLPYVAPELLKR-----REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----  213 (271)
T ss_dssp             CEECEETTEE------CCBCCCCSCGGGSCTHHHHC-----SSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS-----
T ss_pred             heeeccCCcc------ccccceeeCcCccCHhHhcC-----CCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH-----
Confidence            9865433211      12356799999999999973     2234678999999999999999999998754321     


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                               ..+..+.......  ..|..+|++++|||.+||++||++|||++|+|+||||+.
T Consensus       214 ---------~~~~~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         214 ---------QEYSDWKEKKTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             ---------HHHHHHHTTCTTS--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             ---------HHHHHHhcCCCCC--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence                     1223333332222  236789999999999999999999999999999999974

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-53  Score=413.57  Aligned_cols=252  Identities=28%  Similarity=0.499  Sum_probs=192.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||+||+|+++.+++.||||++.+.   .......+.+|++++..+ +|||||++++++++....+ 
T Consensus         6 ~dy~i-~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~-   82 (263)
T d2j4za1           6 EDFEI-GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVY-   82 (263)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             hHeEE-EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEE-
Confidence            34666 57899999999999999999999999999642   123456788999999987 6999999999998765543 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +                 +|.-+ +              .+...+.....+.++.+              
T Consensus        83 --iv------m-----------------Ey~~~-g--------------~L~~~l~~~~~l~e~~~--------------  108 (263)
T d2j4za1          83 --LI------L-----------------EYAPL-G--------------TVYRELQKLSKFDEQRT--------------  108 (263)
T ss_dssp             --EE------E-----------------ECCTT-C--------------BHHHHHHHHSSCCHHHH--------------
T ss_pred             --EE------E-----------------eecCC-C--------------cHHHHHhhcCCCCHHHH--------------
Confidence              11      1                 22101 0              00000000000010000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+|||+|
T Consensus       109 ---------------------------~~i~~q---i~~al~~lH--~~~ivHrDiKp~Nill~---~~~~~kl~DFG~a  153 (263)
T d2j4za1         109 ---------------------------ATYITE---LANALSYCH--SKRVIHRDIKPENLLLG---SAGELKIADFGWS  153 (263)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEECCCCSC
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--HCCeeeeeeccccceec---CCCCEeeccccee
Confidence                                       014455   778888888  99999999999999995   4456999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.....          ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       154 ~~~~~~----------~~~~~~Gt~~Y~APE~~~~------~~~~~~~DiwSlGvilyell~G~~Pf~~~~---------  208 (263)
T d2j4za1         154 VHAPSS----------RRTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANT---------  208 (263)
T ss_dssp             SCCCCC----------CCEETTEEGGGCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSS---------
T ss_pred             eecCCC----------cccccCCCCcccCHHHHcC------CCCCchhhhhhHhHHHHHHhcCCCCCCCCC---------
Confidence            754322          2346789999999999963      579999999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                            ...++..|..+.+.+|.    .+|+++++||.+||++||++|||++|+|+||||+.
T Consensus       209 ------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         209 ------YQETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             ------HHHHHHHHHTTCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             ------HHHHHHHHHcCCCCCCc----cCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence                  34577888888888875    58999999999999999999999999999999964

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.8e-52  Score=426.30  Aligned_cols=265  Identities=29%  Similarity=0.510  Sum_probs=204.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .-+.|++ .+.||+|+||+||+|+++.+|+.||||++.+......+.+.+|+++|.++ +|||||+++++|++....+  
T Consensus        24 il~~Y~i-~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~--   99 (350)
T d1koaa2          24 VLDHYDI-HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMV--   99 (350)
T ss_dssp             GGGTEEE-EEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTEEE--
T ss_pred             CccCeEE-EEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE--
Confidence            3456776 57899999999999999999999999999765444456788999999997 5999999999998765543  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                       .|      +|.+-                 + +              .+...+.. ...++.+.+              
T Consensus       100 -iv------mE~~~-----------------g-g--------------~L~~~l~~~~~~l~e~~~--------------  126 (350)
T d1koaa2         100 -MI------YEFMS-----------------G-G--------------ELFEKVADEHNKMSEDEA--------------  126 (350)
T ss_dssp             -EE------ECCCC-----------------S-C--------------BHHHHHTCTTSCBCHHHH--------------
T ss_pred             -EE------EEcCC-----------------C-C--------------CHHHHHHhhcCCCCHHHH--------------
Confidence             12      22111                 1 0              01010000 000111111              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                            -.                     |.+|   ++.|+.|+|  ++|||||||||+|||+..+ ..+.+||+|||+|
T Consensus       127 ------~~---------------------i~~q---i~~aL~ylH--~~~iiHrDiKp~NIll~~~-~~~~vkL~DFG~a  173 (350)
T d1koaa2         127 ------VE---------------------YMRQ---VCKGLCHMH--ENNYVHLDLKPENIMFTTK-RSNELKLIDFGLT  173 (350)
T ss_dssp             ------HH---------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEESST-TSCCEEECCCTTC
T ss_pred             ------HH---------------------HHHH---HHHHHHHHH--hcCCeeeeechhHeeeccC-CCCeEEEeecchh
Confidence                  01                     4445   778888888  9999999999999999653 2367999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+....         ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       174 ~~~~~~~---------~~~~~~gT~~Y~aPEv~~~------~~~~~~~DiwSlGvilyell~G~~Pf~~~~---------  229 (350)
T d1koaa2         174 AHLDPKQ---------SVKVTTGTAEFAAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGGEN---------  229 (350)
T ss_dssp             EECCTTS---------CEEEECSCTTTCCHHHHHT------CCBCHHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             eeccccc---------ccceecCcccccCHHHHcC------CCCChhHhhhhhhHHHHHHHhCCCCCCCCC---------
Confidence            8654322         2346799999999999973      579999999999999999999999998754         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA  429 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~~  429 (539)
                            ...++..|..+.+.++...+..+|++++|||.+||++||++|||++|+|+||||+.....
T Consensus       230 ------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~  289 (350)
T d1koaa2         230 ------DDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  289 (350)
T ss_dssp             ------HHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCC
T ss_pred             ------HHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCCC
Confidence                  345778889999998888888999999999999999999999999999999999876543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-52  Score=417.85  Aligned_cols=260  Identities=29%  Similarity=0.487  Sum_probs=193.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      +.|++ .+.||+|+||+||+|+++.+|+.||||++++.   .......+.+|+++|.++ +|||||+++++|++....+ 
T Consensus         8 ~dy~i-~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~-   84 (288)
T d1uu3a_           8 EDFKF-GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLY-   84 (288)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEE-
T ss_pred             CCCEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEE-
Confidence            45776 68899999999999999999999999999642   223456789999999997 6999999999998775544 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|      +|.+-                 + +              .+...+.....+..+                
T Consensus        85 --iv------mEy~~-----------------g-g--------------~L~~~~~~~~~l~e~----------------  108 (288)
T d1uu3a_          85 --FG------LSYAK-----------------N-G--------------ELLKYIRKIGSFDET----------------  108 (288)
T ss_dssp             --EE------ECCCT-----------------T-E--------------EHHHHHHHHSSCCHH----------------
T ss_pred             --EE------EEccC-----------------C-C--------------CHHHhhhccCCCCHH----------------
Confidence              12      22211                 0 0              000000000000000                


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                       +++                        .+..|   ++.++.|+|  ++|||||||||+|||+.   ..+.+||+|||+|
T Consensus       109 -~~~------------------------~~~~q---i~~al~ylH--~~~iiHrDiKp~NIll~---~~~~vkl~DFG~a  155 (288)
T d1uu3a_         109 -CTR------------------------FYTAE---IVSALEYLH--GKGIIHRDLKPENILLN---EDMHIQITDFGTA  155 (288)
T ss_dssp             -HHH------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             -HHH------------------------HHHHH---HHHHHHhhc--cccEEcCcCCccccccC---CCceEEecccccc
Confidence             000                        13444   677888888  99999999999999994   4467999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+.....      .....+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       156 ~~~~~~~~------~~~~~~~~GT~~Y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~---------  214 (288)
T d1uu3a_         156 KVLSPESK------QARANSFVGTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGN---------  214 (288)
T ss_dssp             EECC----------------CCCCGGGCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             eecccCCc------ccccccccCCccccCceeecc------CCCCcccceehhhHHHHHHhhCCCCCCCcC---------
Confidence            86543221      112346799999999999973      579999999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHH------HhcCCCccCCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS------VLKHPWISTAGTA  429 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e------~l~Hpw~~~~~~~  429 (539)
                            ...++.+|..+.+.+|.    .+|++++|||++||++||.+|||++|      +++||||.+.++.
T Consensus       215 ------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~  276 (288)
T d1uu3a_         215 ------EYLIFQKIIKLEYDFPE----KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE  276 (288)
T ss_dssp             ------HHHHHHHHHTTCCCCCT----TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred             ------HHHHHHHHHcCCCCCCc----cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHH
Confidence                  34577889999888875    68999999999999999999999988      5889999987764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-52  Score=415.36  Aligned_cols=259  Identities=27%  Similarity=0.391  Sum_probs=193.0

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .++.|++ .+.||+|+||+||+|+++.+|+.||||++++......+.+.+|+++|+++ +|||||+++++|.+....+  
T Consensus        18 p~~~Y~~-~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~--   93 (293)
T d1yhwa1          18 PKKKYTR-FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW--   93 (293)
T ss_dssp             TTTTBCS-CEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE--
T ss_pred             cccccEE-EEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEE--
Confidence            4556776 57899999999999999999999999999765555677899999999987 5999999999998765443  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...... ..+.++.+               
T Consensus        94 -iv------mEy~~-----------------g-g--------------~L~~~~~~-~~l~~~~~---------------  118 (293)
T d1yhwa1          94 -VV------MEYLA-----------------G-G--------------SLTDVVTE-TCMDEGQI---------------  118 (293)
T ss_dssp             -EE------EECCT-----------------T-C--------------BHHHHHHH-SCCCHHHH---------------
T ss_pred             -EE------EEecC-----------------C-C--------------cHHHHhhc-cCCCHHHH---------------
Confidence             11      12110                 1 0              00000000 00000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                                ..|.+|   ++.|+.|+|  ++|||||||||+|||+..   .+.+||+|||+|+
T Consensus       119 --------------------------~~i~~q---i~~aL~yLH--~~~iiHrDiKp~NILl~~---~~~vkl~DFG~a~  164 (293)
T d1yhwa1         119 --------------------------AAVCRE---CLQALEFLH--SNQVIHRDIKSDNILLGM---DGSVKLTDFGFCA  164 (293)
T ss_dssp             --------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEECT---TCCEEECCCTTCE
T ss_pred             --------------------------HHHHHH---HHHHHHHHH--HCCCcccCCcHHHeEECC---CCcEeeccchhhe
Confidence                                      014555   778888888  999999999999999953   4579999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+.....        ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+.         
T Consensus       165 ~~~~~~~--------~~~~~~gt~~Y~aPE~~~~------~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---------  221 (293)
T d1yhwa1         165 QITPEQS--------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---------  221 (293)
T ss_dssp             ECCSTTC--------CBCCCCSCGGGCCHHHHSS------SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---------
T ss_pred             eeccccc--------cccccccCCCccChhhhcC------CCCCchhceehHhHHHHHHhhCCCCCCCCCH---------
Confidence            6543221        2346799999999999963      5699999999999999999999999987531         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                           .+.+...+..+.+.++  .+..+|+++++||.+||.+||.+|||++|+|+||||+..
T Consensus       222 -----~~~~~~~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~  276 (293)
T d1yhwa1         222 -----LRALYLIATNGTPELQ--NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (293)
T ss_dssp             -----HHHHHHHHHHCSCCCS--SGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             -----HHHHHHHHhCCCCCCC--CcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                 2334444455544443  245799999999999999999999999999999999753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.5e-52  Score=423.85  Aligned_cols=265  Identities=32%  Similarity=0.560  Sum_probs=204.4

Q ss_pred             cccccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        42 ~~~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .+.+.+.|++ .+.||+|+||+||+|+++.+|+.||||++++........+.+|+++|.++ +|||||+++++|+++...
T Consensus        24 ~~~~~d~Y~i-~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~  101 (352)
T d1koba_          24 QGSVYDYYDI-LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEM  101 (352)
T ss_dssp             CSCGGGTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEE
T ss_pred             CCCcccceEE-EEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence            3445677887 57899999999999999999999999999765444456788999999987 699999999999876554


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCc-ccccccccccCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF-MAPEIVNAFMGPEASGY  200 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y-~aPE~~~~~~~~~~~~~  200 (539)
                      +   .|      +|.+-                 + +              .++..+..... +.++.+           
T Consensus       102 ~---iv------mE~~~-----------------g-g--------------~L~~~~~~~~~~l~e~~~-----------  129 (352)
T d1koba_         102 V---LI------LEFLS-----------------G-G--------------ELFDRIAAEDYKMSEAEV-----------  129 (352)
T ss_dssp             E---EE------EECCC-----------------C-C--------------BHHHHTTCTTCCBCHHHH-----------
T ss_pred             E---EE------EEcCC-----------------C-C--------------hHHHHHHhcCCCCCHHHH-----------
Confidence            4   12      22110                 1 0              01110000000 111101           


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                            +                        .|++|   ++.|+.|+|  ++|||||||||+|||+... ..+.+||+||
T Consensus       130 ------~------------------------~i~~q---i~~aL~ylH--~~~iiHRDiKp~NILl~~~-~~~~vkL~DF  173 (352)
T d1koba_         130 ------I------------------------NYMRQ---ACEGLKHMH--EHSIVHLDIKPENIMCETK-KASSVKIIDF  173 (352)
T ss_dssp             ------H------------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEESST-TCCCEEECCC
T ss_pred             ------H------------------------HHHHH---HHHHHHHHH--HCCeeeccccccccccccc-CCCeEEEeec
Confidence                  0                        04445   778888888  9999999999999999642 3467999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+|+.+....         ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|.+||.+.+      
T Consensus       174 Gla~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvilyelltG~~Pf~~~~------  232 (352)
T d1koba_         174 GLATKLNPDE---------IVKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGED------  232 (352)
T ss_dssp             TTCEECCTTS---------CEEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------
T ss_pred             ccceecCCCC---------ceeeccCcccccCHHHHcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCC------
Confidence            9998654322         2456799999999999963      579999999999999999999999998754      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                               ...++..|..+.+.+|...|..+|++++|||++||++||.+|||++|+|+||||+..
T Consensus       233 ---------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         233 ---------DLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             ---------HHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ---------HHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence                     345678889999999988889999999999999999999999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-52  Score=419.81  Aligned_cols=256  Identities=27%  Similarity=0.438  Sum_probs=195.6

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .++||+|+||+||+|+++.+|+.||||++++.   ......++.+|+.+|.++ +|||||+++++|++....+  
T Consensus         6 dy~~-~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~--   81 (337)
T d1o6la_           6 DFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLC--   81 (337)
T ss_dssp             GEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEE--
T ss_pred             hcEE-EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeeccccccc--
Confidence            4665 57899999999999999999999999999753   223457788999999987 5999999999998876544  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .+|.-+ +              .+...+.......++.+               
T Consensus        82 -iv-----------------------~ey~~g-g--------------~L~~~~~~~~~~~e~~~---------------  107 (337)
T d1o6la_          82 -FV-----------------------MEYANG-G--------------ELFFHLSRERVFTEERA---------------  107 (337)
T ss_dssp             -EE-----------------------EECCTT-C--------------BHHHHHHHHSCCCHHHH---------------
T ss_pred             -cc-----------------------eeccCC-C--------------chhhhhhcccCCcHHHH---------------
Confidence             11                       122111 0              01000000000111111               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                                ..+.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+|||+|+
T Consensus       108 --------------------------~~~~~q---il~al~ylH--~~~iiHRDlKP~NILl~---~~g~vkl~DFG~a~  153 (337)
T d1o6la_         108 --------------------------RFYGAE---IVSALEYLH--SRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  153 (337)
T ss_dssp             --------------------------HHHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             --------------------------HHHHHH---Hhhhhhhhh--hcCccccccCHHHeEec---CCCCEEEeeccccc
Confidence                                      014445   677888888  99999999999999994   45679999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ......        ....+.|||+.|||||++.+      .+|+.++|||||||++|+|++|++||.+.+          
T Consensus       154 ~~~~~~--------~~~~~~~GT~~Y~aPE~~~~------~~y~~~~DiwSlGvilyeml~G~~pf~~~~----------  209 (337)
T d1o6la_         154 EGISDG--------ATMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----------  209 (337)
T ss_dssp             CSCCTT--------CCBCCCEECGGGCCGGGGSS------SCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----------
T ss_pred             ccccCC--------cccccceeCHHHhhhhhccC------CCCChhhcccchhhHHHHHHHCCCCCCCcC----------
Confidence            543222        13457899999999999963      579999999999999999999999998764          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                           ...++..|..+.+.+|.    .+|++++|||++||++||.+|++     ++|+++||||.+..+
T Consensus       210 -----~~~~~~~i~~~~~~~p~----~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         210 -----HERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             -----HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             -----HHHHHHHHhcCCCCCCc----cCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCH
Confidence                 34578889999988875    68999999999999999999994     899999999987654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=411.27  Aligned_cols=266  Identities=37%  Similarity=0.593  Sum_probs=200.7

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC------CCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG------HSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~------~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      .+.|.|++ ++.||+|+||+||+|+++.+|+.||||++++...      ...+.+.+|+++|+++ +|||||+++++|++
T Consensus         7 ~i~d~Y~~-~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~   84 (293)
T d1jksa_           7 NVDDYYDT-GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYEN   84 (293)
T ss_dssp             CGGGTEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEEC
T ss_pred             CcccCEEE-eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEE
Confidence            46778887 5889999999999999999999999999975321      2356789999999997 59999999999987


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|      +|.+-                 + +              .+...+.....+..+.+        
T Consensus        85 ~~~~~---iv------~E~~~-----------------g-g--------------~L~~~i~~~~~l~~~~~--------  115 (293)
T d1jksa_          85 KTDVI---LI------LELVA-----------------G-G--------------ELFDFLAEKESLTEEEA--------  115 (293)
T ss_dssp             SSEEE---EE------EECCC-----------------S-C--------------BHHHHHHHHSSCCHHHH--------
T ss_pred             CCEEE---EE------EEcCC-----------------C-c--------------cccchhccccccchhHH--------
Confidence            65543   11      11110                 1 0              01000000000000000        


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCC-CCCce
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQ-LSPVK  276 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~-~~~ik  276 (539)
                                  -.                     +.+|   ++.|+.|+|  ++||+||||||+|||+...+. ...+|
T Consensus       116 ------------~~---------------------~~~q---i~~al~yLH--~~~ivHrDiKp~Nill~~~~~~~~~vk  157 (293)
T d1jksa_         116 ------------TE---------------------FLKQ---ILNGVYYLH--SLQIAHFDLKPENIMLLDRNVPKPRIK  157 (293)
T ss_dssp             ------------HH---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEESCSSSSSCCEE
T ss_pred             ------------HH---------------------HHHH---HHHHHHhhh--hcceeecccccceEEEecCCCcccceE
Confidence                        01                     3444   677888888  999999999999999965442 23599


Q ss_pred             eccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCC
Q psy16343        277 LCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE  356 (539)
Q Consensus       277 l~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~  356 (539)
                      |+|||+|+......         ...+.+||+.|+|||++..      ..|+.++||||+||++|+|++|.+||.+.+  
T Consensus       158 l~DfG~a~~~~~~~---------~~~~~~~t~~y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~--  220 (293)
T d1jksa_         158 IIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDT--  220 (293)
T ss_dssp             ECCCTTCEECTTSC---------BCSCCCCCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--
T ss_pred             ecchhhhhhcCCCc---------cccccCCCCcccCHHHHcC------CCCCCcccchhhhHHHHHHHcCCCCCCCCC--
Confidence            99999997654322         2346789999999999963      568999999999999999999999998754  


Q ss_pred             CCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCCC
Q psy16343        357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT  428 (539)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~~  428 (539)
                                   ...++..|..+.+.++...+..+|++++|||++||.+||++|||++|+|+||||+...+
T Consensus       221 -------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         221 -------------KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             -------------HHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             -------------HHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence                         34567788889888887777889999999999999999999999999999999986443

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=410.94  Aligned_cols=263  Identities=24%  Similarity=0.342  Sum_probs=191.7

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      +|.|++ .+.||+|+||+||+|+++.+++.||||++++......+.+.+|+++|+++ +|||||+++++|.+....+   
T Consensus        11 ~d~Y~i-~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~---   85 (288)
T d2jfla1          11 EDFWEI-IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLW---   85 (288)
T ss_dssp             GGTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEE---
T ss_pred             ccCeEE-eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEE---
Confidence            567876 46799999999999999999999999999776555567789999999997 5999999999998765433   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC-CCCcccccccccccCCCCCCCCccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g-t~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      .|                       .+|.-+ +              .+...+. ....+.++..               
T Consensus        86 lv-----------------------mEy~~~-g--------------~L~~~~~~~~~~l~e~~~---------------  112 (288)
T d2jfla1          86 IL-----------------------IEFCAG-G--------------AVDAVMLELERPLTESQI---------------  112 (288)
T ss_dssp             EE-----------------------EECCTT-E--------------EHHHHHHHHTSCCCHHHH---------------
T ss_pred             EE-----------------------EecCCC-C--------------cHHHHHHhcCCCCCHHHH---------------
Confidence            11                       122101 0              0000000 0000011100               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                                ..+.+|   ++.|+.|+|  ++||+||||||+|||++   ..+.+||+|||+|+
T Consensus       113 --------------------------~~i~~q---i~~gL~ylH--~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a~  158 (288)
T d2jfla1         113 --------------------------QVVCKQ---TLDALNYLH--DNKIIHRDLKAGNILFT---LDGDIKLADFGVSA  158 (288)
T ss_dssp             --------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             --------------------------HHHHHH---HHHHHHHHH--HCCEEEeecChhheeEC---CCCCEEEEechhhh
Confidence                                      014455   778888888  99999999999999995   44569999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ...+.+||+.|||||++..... ....|+.++|||||||++|+|++|++||.+.+..        
T Consensus       159 ~~~~~~~--------~~~~~~Gt~~y~APE~l~~~~~-~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~--------  221 (288)
T d2jfla1         159 KNTRTIQ--------RRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--------  221 (288)
T ss_dssp             ECHHHHH--------HHTCCCSCCTTCCHHHHTTCST-TTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------
T ss_pred             ccCCCcc--------cccccccccccCCHHHHhhccc-CCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH--------
Confidence            5432111        1346799999999999863211 2356999999999999999999999999876422        


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                             .++..|..+.+... ..+..+|++++|||++||++||++|||++|+|+||||+.
T Consensus       222 -------~~~~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         222 -------RVLLKIAKSEPPTL-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             -------GHHHHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             -------HHHHHHHcCCCCCC-CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                   24555665543322 123578999999999999999999999999999999974

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.4e-51  Score=412.68  Aligned_cols=253  Identities=26%  Similarity=0.462  Sum_probs=192.7

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ .+.||+|+||+||+|+++.+|+.||||++++.   .....+.+.+|+.+|+.+ +|||||++++++++....+  
T Consensus         5 dy~i-~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~--   80 (316)
T d1fota_           5 DFQI-LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIF--   80 (316)
T ss_dssp             GEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEE--
T ss_pred             HeEE-EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeee--
Confidence            4665 57899999999999999999999999999642   223456788999999987 6999999999998776544  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+-                 + +              .+...+........+..               
T Consensus        81 -iv------mE~~~-----------------g-g--------------~l~~~~~~~~~~~~~~~---------------  106 (316)
T d1fota_          81 -MI------MDYIE-----------------G-G--------------ELFSLLRKSQRFPNPVA---------------  106 (316)
T ss_dssp             -EE------ECCCC-----------------S-C--------------BHHHHHHHTSSCCHHHH---------------
T ss_pred             -eE------eeecC-----------------C-c--------------cccccccccccccccHH---------------
Confidence             12      22211                 1 0              00000000000000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                                                ..+.+|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+|+
T Consensus       107 --------------------------~~~~~q---i~~al~~lH--~~~iiHrDiKp~NILl~---~~g~vkL~DFG~a~  152 (316)
T d1fota_         107 --------------------------KFYAAE---VCLALEYLH--SKDIIYRDLKPENILLD---KNGHIKITDFGFAK  152 (316)
T ss_dssp             --------------------------HHHHHH---HHHHHHHHH--TTTEECCCCCGGGEEEC---TTSCEEECCCSSCE
T ss_pred             --------------------------HHHHHH---HHHhhhhhc--cCcEEccccCchheeEc---CCCCEEEecCccce
Confidence                                      003344   677888888  99999999999999994   45679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ....           ...+.|||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+          
T Consensus       153 ~~~~-----------~~~~~~Gt~~Y~APE~l~~------~~y~~~~DiwSlGvilyemltG~~Pf~~~~----------  205 (316)
T d1fota_         153 YVPD-----------VTYTLCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDSN----------  205 (316)
T ss_dssp             ECSS-----------CBCCCCSCTTTCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----------
T ss_pred             Eecc-----------ccccccCcccccCHHHHcC------CCCCchhhccccchhHHHHHhCCCCCCCcC----------
Confidence            5432           1346799999999999963      579999999999999999999999998753          


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                           ...++..|..+.+.+|.    .+|++++|||.+||++||.+|+     |++++|+||||++..+
T Consensus       206 -----~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~  265 (316)
T d1fota_         206 -----TMKTYEKILNAELRFPP----FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  265 (316)
T ss_dssp             -----HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             -----HHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCH
Confidence                 34577788888888875    6899999999999999999997     8999999999988654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5.1e-51  Score=403.81  Aligned_cols=266  Identities=36%  Similarity=0.583  Sum_probs=202.7

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---------CHHHHHHHHHHHHhhcCCCCeeeeeeee
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---------SRSRVFKEVETFHHCQGHPNIIQLLEYY  115 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---------~~~~~~~Ei~~l~~~~~HpnIv~l~~~~  115 (539)
                      |.+.|++ .+.||+|+||+||+|+++.+|+.||||++++....         ...++.+|+.++.++..|||||+++++|
T Consensus         1 f~~~y~~-~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~   79 (277)
T d1phka_           1 FYENYEP-KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   79 (277)
T ss_dssp             CTTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             CcccCEE-ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec
Confidence            6778887 68899999999999999999999999999764321         1235789999999987799999999999


Q ss_pred             cccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCC
Q psy16343        116 EDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP  195 (539)
Q Consensus       116 ~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~  195 (539)
                      +++...+   .|      +                 +|.-+ +              .+...+.....++++...     
T Consensus        80 ~~~~~~~---iv------m-----------------E~~~~-g--------------~L~~~l~~~~~l~e~~~~-----  113 (277)
T d1phka_          80 ETNTFFF---LV------F-----------------DLMKK-G--------------ELFDYLTEKVTLSEKETR-----  113 (277)
T ss_dssp             ECSSEEE---EE------E-----------------ECCTT-C--------------BHHHHHHHHSSCCHHHHH-----
T ss_pred             ccCcceE---EE------E-----------------EcCCC-c--------------hHHHHHHhcCCCCHHHHH-----
Confidence            8766544   11      1                 22101 0              111111010111111111     


Q ss_pred             CCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCc
Q psy16343        196 EASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV  275 (539)
Q Consensus       196 ~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~i  275 (539)
                                     .                     |..|   ++.++.|+|  ++||+||||||+|||+.   ..+.+
T Consensus       114 ---------------~---------------------~~~q---i~~al~~lH--~~~ivHrDlkp~Nill~---~~~~~  149 (277)
T d1phka_         114 ---------------K---------------------IMRA---LLEVICALH--KLNIVHRDLKPENILLD---DDMNI  149 (277)
T ss_dssp             ---------------H---------------------HHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTCCE
T ss_pred             ---------------H---------------------HHHH---HHHHHHHHH--HcCCcccccccceEEEc---CCCCe
Confidence                           0                     4445   778888888  99999999999999994   45669


Q ss_pred             eeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCC
Q psy16343        276 KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG  355 (539)
Q Consensus       276 kl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~  355 (539)
                      ||+|||+++.+....         .....+||+.|+|||++.+........|+.++||||+||++|+|++|++||.+.+ 
T Consensus       150 kl~DFG~a~~~~~~~---------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~-  219 (277)
T d1phka_         150 KLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-  219 (277)
T ss_dssp             EECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-
T ss_pred             EEccchheeEccCCC---------ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC-
Confidence            999999998654322         1245789999999999974322223568899999999999999999999998754 


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccC
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST  425 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~  425 (539)
                                    .......|..+.+.++...+.++|++++|||.+||++||.+|||++|+|+||||+.
T Consensus       220 --------------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         220 --------------QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             --------------HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             --------------HHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence                          34467788888888888888899999999999999999999999999999999975

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-51  Score=417.83  Aligned_cols=269  Identities=32%  Similarity=0.596  Sum_probs=198.4

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .+-+.|++.+++||+|+||+||+|+++.+++.||||++++     ...+.+|++++.++.+|||||+++++|++......
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            3456788777789999999999999999999999999964     35678999998887789999999999976321100


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC--CcccccccccccCCCCCCCC
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA--EFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~--~y~aPE~~~~~~~~~~~~~~  201 (539)
                                  ++.          -+.+|.-+ +              .+...+...  ..+ ||..            
T Consensus        83 ------------~~~----------ivmEy~~g-g--------------~L~~~i~~~~~~~l-~e~~------------  112 (335)
T d2ozaa1          83 ------------CLL----------IVMECLDG-G--------------ELFSRIQDRGDQAF-TERE------------  112 (335)
T ss_dssp             ------------EEE----------EEEECCCS-E--------------EHHHHHHSCSCCCE-EHHH------------
T ss_pred             ------------EEE----------EEEECCCC-C--------------cHHHHHHhcCCCCc-CHHH------------
Confidence                        000          11222101 0              011100000  000 1100            


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                             .                     ..|.+|   ++.|+.|+|  ++||+||||||+|||+...+..+.+||+|||
T Consensus       113 -------~---------------------~~i~~q---i~~al~ylH--~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG  159 (335)
T d2ozaa1         113 -------A---------------------SEIMKS---IGEAIQYLH--SINIAHRDVKPENLLYTSKRPNAILKLTDFG  159 (335)
T ss_dssp             -------H---------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             -------H---------------------HHHHHH---HHHHHHHHH--HcCCccccccccccccccccccccccccccc
Confidence                   0                     014455   778889999  9999999999999999876666789999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +|+......         ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+....   
T Consensus       160 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~---  221 (335)
T d2ozaa1         160 FAKETTSHN---------SLTTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---  221 (335)
T ss_dssp             TCEECCCCC---------CCCCCSCCCSSCCCCCCCG------GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----
T ss_pred             eeeeccCCC---------ccccccCCcccCCcHHHcC------CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH---
Confidence            998654322         2346799999999999863      4699999999999999999999999987653321   


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                              ...+...|..+.+.+|...|..+|++++|||++||++||++|||++|+|+||||...
T Consensus       222 --------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         222 --------SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             --------------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             --------HHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence                    123455677788899988888899999999999999999999999999999999754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-50  Score=400.65  Aligned_cols=256  Identities=25%  Similarity=0.327  Sum_probs=178.8

Q ss_pred             ceeceeCceEEEEEEEccCCcEEEEEEeccCCCC-----CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~-----~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      ++||+|+||+||+|+++.+|+.||||++++....     ....+.+|+++|+++ +|||||+++++|.+....+   .| 
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~---iv-   78 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNIS---LV-   78 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCE---EE-
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCcee---eh-
Confidence            5899999999999999999999999999653221     124688999999997 5999999999998775443   11 


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                                            .++.-+..               +.........+.++.+                   
T Consensus        79 ----------------------mE~~~~~~---------------~~~~~~~~~~l~~~~~-------------------  102 (299)
T d1ua2a_          79 ----------------------FDFMETDL---------------EVIIKDNSLVLTPSHI-------------------  102 (299)
T ss_dssp             ----------------------EECCSEEH---------------HHHHTTCCSSCCSSHH-------------------
T ss_pred             ----------------------hhhhcchH---------------HhhhhhcccCCCHHHH-------------------
Confidence                                  11110100               0000000000011101                   


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                            ..|.+|   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+|+....
T Consensus       103 ----------------------~~~~~q---il~aL~~lH--~~~iiHrDiKp~NIli~---~~~~~KL~DFG~a~~~~~  152 (299)
T d1ua2a_         103 ----------------------KAYMLM---TLQGLEYLH--QHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGS  152 (299)
T ss_dssp             ----------------------HHHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTCCEEECCCGGGSTTTS
T ss_pred             ----------------------HHHHHH---HHHHHHHhh--ccceecccCCcceEEec---CCCccccccCccccccCC
Confidence                                  014445   777888888  99999999999999994   445699999999976543


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ...        ...+.+||+.|||||++..     ...|+.++||||+||++|+|++|.+||.+.+..            
T Consensus       153 ~~~--------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~------------  207 (299)
T d1ua2a_         153 PNR--------AYTHQVVTRWYRAPELLFG-----ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL------------  207 (299)
T ss_dssp             CCC--------CCCCSCCCCTTCCHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------------
T ss_pred             Ccc--------cccceecChhhccHHHHcc-----CCCCChhhhhhhcchHHHHHHhCcCCCCCCCHH------------
Confidence            221        2346799999999999863     346899999999999999999999999876422            


Q ss_pred             hHHHHHHHHhcCCC--------------------CCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        369 CQEILFHSIQQGHY--------------------DFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       369 ~~~~~~~~i~~~~~--------------------~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                         ..+..|.....                    .++..    .++.+|++++|||++||++||++||||+|+|+||||+
T Consensus       208 ---~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~  284 (299)
T d1ua2a_         208 ---DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS  284 (299)
T ss_dssp             ---HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             ---HHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhC
Confidence               12233321100                    00110    1246789999999999999999999999999999998


Q ss_pred             CCCC
Q psy16343        425 TAGT  428 (539)
Q Consensus       425 ~~~~  428 (539)
                      +...
T Consensus       285 ~~p~  288 (299)
T d1ua2a_         285 NRPG  288 (299)
T ss_dssp             SSSC
T ss_pred             CCCC
Confidence            6543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-50  Score=412.85  Aligned_cols=254  Identities=27%  Similarity=0.468  Sum_probs=193.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      |.|++ .+.||+|+||.||+|+++.+|+.||||++++.   .......+.+|+++|+.+ +|||||+++++|.+....+ 
T Consensus        41 d~y~i-~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~-  117 (350)
T d1rdqe_          41 DQFDR-IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLY-  117 (350)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE-
T ss_pred             cCeEE-EEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccccc-
Confidence            56776 47899999999999999999999999999642   123456788999999987 6999999999998765433 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .++..+ +              .+...+.....+..+.+              
T Consensus       118 --~v-----------------------~e~~~~-g--------------~l~~~l~~~~~l~e~~~--------------  143 (350)
T d1rdqe_         118 --MV-----------------------MEYVAG-G--------------EMFSHLRRIGRFSEPHA--------------  143 (350)
T ss_dssp             --EE-----------------------EECCTT-C--------------BHHHHHHHHCCCCHHHH--------------
T ss_pred             --cc-----------------------cccccc-c--------------chhhhHhhcCCCCHHHH--------------
Confidence              11                       111101 0              00000000000111100              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+.+|   ++.++.|+|  ++|||||||||+|||+.   ..+.+||+|||+|
T Consensus       144 ---------------------------~~i~~q---i~~aL~yLH--~~~iiHRDIKP~NILl~---~~g~ikL~DFG~a  188 (350)
T d1rdqe_         144 ---------------------------RFYAAQ---IVLTFEYLH--SLDLIYRDLKPENLLID---QQGYIQVTDFGFA  188 (350)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             ---------------------------HHHHHH---HHHHHHHHH--hCCEecCcCCHHHcccC---CCCCEEeeeceee
Confidence                                       014445   777888888  99999999999999994   4467999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.+..           ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       189 ~~~~~-----------~~~~~~Gt~~Y~APE~~~~------~~~~~~~DiwSlGvilyemltG~~Pf~~~~---------  242 (350)
T d1rdqe_         189 KRVKG-----------RTWTLCGTPEALAPEIILS------KGYNKAVDWWALGVLIYEMAAGYPPFFADQ---------  242 (350)
T ss_dssp             EECSS-----------CBCCCEECGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             eeccc-----------ccccccCccccCCHHHHcC------CCCCccccccchhHHHHHHHhCCCCCCCcC---------
Confidence            86532           1246799999999999963      579999999999999999999999998753         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~~  428 (539)
                            ...++..|..+.+.+|.    .+|+++++||++||++||.+|+     |++|+|+||||++..+
T Consensus       243 ------~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         243 ------PIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             ------HHHHHHHHHHCCCCCCT----TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             ------HHHHHHHHhcCCCCCCc----cCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCH
Confidence                  34567788888887774    6899999999999999999995     8999999999987654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-51  Score=410.61  Aligned_cols=261  Identities=28%  Similarity=0.493  Sum_probs=201.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.+.|++ .+.||+|+||+||+|+++.+|+.||||++++.. .....+.+|+++|..+ +|||||+++++|++....+  
T Consensus         3 ~~~rY~i-~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~--   77 (321)
T d1tkia_           3 LYEKYMI-AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIA-RHRNILHLHESFESMEELV--   77 (321)
T ss_dssp             CTTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEE--
T ss_pred             CccceEE-EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE--
Confidence            4567887 578999999999999999999999999997543 2345678999999987 5999999999998876554  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCc-ccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF-MAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y-~aPE~~~~~~~~~~~~~~~~  203 (539)
                       .|      +|.+-                 + +              .+...+..... +..+.+              
T Consensus        78 -lv------mE~~~-----------------g-g--------------~L~~~i~~~~~~l~e~~~--------------  104 (321)
T d1tkia_          78 -MI------FEFIS-----------------G-L--------------DIFERINTSAFELNEREI--------------  104 (321)
T ss_dssp             -EE------ECCCC-----------------C-C--------------BHHHHHTSSSCCCCHHHH--------------
T ss_pred             -EE------EecCC-----------------C-C--------------cHHHHHHhcCCCCCHHHH--------------
Confidence             22      22211                 1 0              11111111000 010000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                            -                     .|.+|   ++.++.|+|  ++||+||||||+|||+..+ ....+||+|||++
T Consensus       105 ------~---------------------~i~~q---i~~al~yLH--~~~iiHrDlKp~NIll~~~-~~~~ikl~DFG~~  151 (321)
T d1tkia_         105 ------V---------------------SYVHQ---VCEALQFLH--SHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQA  151 (321)
T ss_dssp             ------H---------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEESSS-SCCCEEECCCTTC
T ss_pred             ------H---------------------HHHHH---HHHHHHHHH--HcCCCcccccccceeecCC-CceEEEEcccchh
Confidence                  0                     13445   778888998  9999999999999999653 3357999999998


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +......         ...+.+||+.|+|||++.+      ..|+.++|||||||++|+|++|.+||.+.+         
T Consensus       152 ~~~~~~~---------~~~~~~~t~~y~ape~~~~------~~~~~~~DiWSlGvily~ll~G~~Pf~~~~---------  207 (321)
T d1tkia_         152 RQLKPGD---------NFRLLFTAPEYYAPEVHQH------DVVSTATDMWSLGTLVYVLLSGINPFLAET---------  207 (321)
T ss_dssp             EECCTTC---------EEEEEESCGGGSCHHHHTT------CEECHHHHHHHHHHHHHHHHHSSCTTCCSS---------
T ss_pred             hccccCC---------cccccccccccccchhccC------CCCCchhhcccHHHHHHHHHhCCCCCCCCC---------
Confidence            7643221         2356789999999999863      568999999999999999999999998754         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                            ...++..|..+.+.++...|..+|++++|||++||++||.+|||++|+|+||||...
T Consensus       208 ------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         208 ------NQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             ------HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             ------HHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence                  345788899999999988888999999999999999999999999999999999753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-50  Score=396.09  Aligned_cols=253  Identities=23%  Similarity=0.374  Sum_probs=180.7

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||+||+|++..+++.||||++.+..  .....++.+|+++|+++ +|||||+++++|++.....        
T Consensus        14 ~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~--------   84 (270)
T d1t4ha_          14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGK--------   84 (270)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSC--------
T ss_pred             eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccC--------
Confidence            457999999999999999999999999986532  22345688999999987 5999999999986532110        


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                          .++.          -+.+|.-+ +              .+...+.....+..+.+                     
T Consensus        85 ----~~~~----------ivmE~~~~-g--------------~L~~~l~~~~~~~~~~~---------------------  114 (270)
T d1t4ha_          85 ----KCIV----------LVTELMTS-G--------------TLKTYLKRFKVMKIKVL---------------------  114 (270)
T ss_dssp             ----EEEE----------EEEECCCS-C--------------BHHHHHHHHSSCCHHHH---------------------
T ss_pred             ----CEEE----------EEEeCCCC-C--------------cHHHHHhccccccHHHH---------------------
Confidence                0010          01222101 0              00000000000000000                     


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC--CCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g--IvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                                          ..|.+|   ++.++.|+|  ++|  |+||||||+|||++.+  .+.+||+|||+|+....
T Consensus       115 --------------------~~~~~q---i~~gl~yLH--~~~~~IiHrDiKp~NILl~~~--~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_         115 --------------------RSWCRQ---ILKGLQFLH--TRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             --------------------HHHHHH---HHHHHHHHH--TSSSCCCCSCCCGGGEEESST--TSCEEECCTTGGGGCCT
T ss_pred             --------------------HHHHHH---HHHHHHHHH--HCCCCEEeCCcChhhceeeCC--CCCEEEeecCcceeccC
Confidence                                014455   778888888  777  9999999999999532  35699999999974322


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      .          ...+.+||+.|||||++.       ..|+.++|||||||++|+|++|++||.+...             
T Consensus       168 ~----------~~~~~~GT~~Y~aPE~~~-------~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-------------  217 (270)
T d1t4ha_         168 S----------FAKAVIGTPEFMAPEMYE-------EKYDESVDVYAFGMCMLEMATSEYPYSECQN-------------  217 (270)
T ss_dssp             T----------SBEESCSSCCCCCGGGGG-------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------------
T ss_pred             C----------ccCCcccCccccCHHHhC-------CCCCCcCchhhHHHHHHHHHHCCCCCCCccc-------------
Confidence            1          234679999999999985       2599999999999999999999999976431             


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                       ...++..+..+..  |...+...++++++||.+||.+||++|||++|+|+||||+
T Consensus       218 -~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         218 -AAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -HHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -HHHHHHHHHcCCC--CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence             3456677766543  2223356899999999999999999999999999999995

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-51  Score=410.85  Aligned_cols=270  Identities=22%  Similarity=0.335  Sum_probs=182.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|.|++ .+.||+|+||+||+|+++.+|+.||||++++.. .....++.+|+.+|+.+ +|||||+++++|++....+  
T Consensus         5 ~d~y~~-~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~--   80 (322)
T d1s9ja_           5 DDDFEK-ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS--   80 (322)
T ss_dssp             GGGEEE-EEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEE--
T ss_pred             ccCCEE-EEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE--
Confidence            566776 478999999999999999999999999997542 23356788999999987 5999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|                       .+|.-+ +              .+...+.....+..+.+               
T Consensus        81 -iV-----------------------mEy~~g-g--------------~L~~~l~~~~~l~~~~~---------------  106 (322)
T d1s9ja_          81 -IC-----------------------MEHMDG-G--------------SLDQVLKKAGRIPEQIL---------------  106 (322)
T ss_dssp             -EE-----------------------EECCTT-E--------------EHHHHHHHHSSCCHHHH---------------
T ss_pred             -EE-----------------------EEcCCC-C--------------cHHHHHhhcCCCCHHHH---------------
Confidence             11                       111101 0              00000000000000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                           -.                     +..|   ++.|+.|+|  + +||+||||||+|||+.   ..+.+||+|||+|
T Consensus       107 -----~~---------------------~~~q---il~aL~yLH--~~~~IiHRDiKP~NILl~---~~~~vkl~DFGla  152 (322)
T d1s9ja_         107 -----GK---------------------VSIA---VIKGLTYLR--EKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  152 (322)
T ss_dssp             -----HH---------------------HHHH---HHHHHHHHH--HHHCCCCSCCSGGGEEEC---TTCCEEECCCCCC
T ss_pred             -----HH---------------------HHHH---HHHHHHHHH--HhCCEEccccCHHHeeEC---CCCCEEEeeCCCc
Confidence                 01                     3334   677888888  6 4999999999999995   4456999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc-
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR-  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~-  362 (539)
                      +.....          ...+.+||++|||||++.+      ..|+.++||||+||++|+|++|++||.+.+........ 
T Consensus       153 ~~~~~~----------~~~~~~GT~~Y~APEvl~~------~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~  216 (322)
T d1s9ja_         153 GQLIDS----------MANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG  216 (322)
T ss_dssp             HHHHHH----------TC---CCSSCCCCHHHHHC------SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-
T ss_pred             cccCCC----------ccccccCCccccCchHHcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            855322          1246799999999999974      47999999999999999999999999876432100000 


Q ss_pred             ----Ccc----------------------chhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        363 ----GET----------------------CHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       363 ----~~~----------------------~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                          +..                      ...........+... .+.+|.   ..+|.+++|||.+||++||.+||||+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~  293 (322)
T d1s9ja_         217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLK  293 (322)
T ss_dssp             -----------------------------CCCCHHHHHHHHHTSCCCCCCB---TTBCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCcc---ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence                000                      000001111222221 122222   34789999999999999999999999


Q ss_pred             HHhcCCCccCC
Q psy16343        416 SVLKHPWISTA  426 (539)
Q Consensus       416 e~l~Hpw~~~~  426 (539)
                      |+|+||||+..
T Consensus       294 e~L~Hpf~~~~  304 (322)
T d1s9ja_         294 QLMVHAFIKRS  304 (322)
T ss_dssp             HHHTSHHHHHH
T ss_pred             HHhhCHhhCcC
Confidence            99999999754

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-50  Score=406.30  Aligned_cols=258  Identities=27%  Similarity=0.405  Sum_probs=194.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC---CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~---~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      |.|++ ++.||+|+||+||+|+++.+|+.||||++++.   .......+.+|+.++.+..+|||||+++++|+++...+ 
T Consensus         2 ddy~i-~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~y-   79 (320)
T d1xjda_           2 EDFIL-HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF-   79 (320)
T ss_dssp             TTEEE-EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE-
T ss_pred             CCeEE-eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCcee-
Confidence            45776 57899999999999999999999999999642   12345667888888876568999999999998876544 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .+|.-+ +              .+...+....-. ||..              
T Consensus        80 --iv-----------------------mEy~~~-g--------------~L~~~i~~~~~~-~e~~--------------  104 (320)
T d1xjda_          80 --FV-----------------------MEYLNG-G--------------DLMYHIQSCHKF-DLSR--------------  104 (320)
T ss_dssp             --EE-----------------------EECCTT-C--------------BHHHHHHHHSSC-CHHH--------------
T ss_pred             --EE-----------------------EeecCC-C--------------cHHHHhhccCCC-CHHH--------------
Confidence              11                       121101 0              010000000000 0000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                           .                     ..+.+|   ++.|+.|+|  ++||+||||||+|||+.   ..+.+||+|||+|
T Consensus       105 -----~---------------------~~~~~q---i~~al~ylH--~~~iiHrDikp~NiL~~---~~~~~kl~DFG~a  150 (320)
T d1xjda_         105 -----A---------------------TFYAAE---IILGLQFLH--SKGIVYRDLKLDNILLD---KDGHIKIADFGMC  150 (320)
T ss_dssp             -----H---------------------HHHHHH---HHHHHHHHH--HTTCBCCCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             -----H---------------------HHHHHH---HHHHHHHHH--hCCeeeccCcccceeec---CCCceeccccchh
Confidence                 0                     013444   777888888  99999999999999994   4567999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.......        .....+||+.|+|||++.+      ..|+.++|||||||++|+|++|++||.+.+         
T Consensus       151 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvilyemltG~~PF~~~~---------  207 (320)
T d1xjda_         151 KENMLGDA--------KTNTFCGTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD---------  207 (320)
T ss_dssp             BCCCCTTC--------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---------
T ss_pred             hhcccccc--------cccccCCCCCcCCHHHHcC------CCCCchhhhhhhhHHHHHHHhCCCCCCCCC---------
Confidence            75433221        2345799999999999973      579999999999999999999999998764         


Q ss_pred             ccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHH-HHhcCCCccCCCC
Q psy16343        364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA-SVLKHPWISTAGT  428 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~-e~l~Hpw~~~~~~  428 (539)
                            ...++..|..+.+.+|.    .+|++++|||++||++||.+|||+. |+++||||+...+
T Consensus       208 ------~~~~~~~i~~~~~~~p~----~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         208 ------EEELFHSIRMDNPFYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  263 (320)
T ss_dssp             ------HHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             ------HHHHHHHHHcCCCCCCc----cCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCCH
Confidence                  34577888888888874    6899999999999999999999995 8999999987643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-50  Score=403.85  Aligned_cols=257  Identities=23%  Similarity=0.312  Sum_probs=185.2

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC---CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH---SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~---~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      ++.|+. .+.||+|+||+||+|+++.+|+.||||++++....   ....+.+|+++|.++ +|||||+++++|.+....+
T Consensus        14 ~~~y~~-l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~   91 (309)
T d1u5ra_          14 EKLFSD-LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW   91 (309)
T ss_dssp             HHHEEE-EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             HHhcEe-eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEEE
Confidence            345664 46799999999999999999999999999754322   234688999999997 5999999999998765433


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                         .|      +                 +|..+....               ........+..+               
T Consensus        92 ---iv------~-----------------E~~~~g~l~---------------~~~~~~~~l~e~---------------  115 (309)
T d1u5ra_          92 ---LV------M-----------------EYCLGSASD---------------LLEVHKKPLQEV---------------  115 (309)
T ss_dssp             ---EE------E-----------------ECCSEEHHH---------------HHHHHTSCCCHH---------------
T ss_pred             ---EE------E-----------------EecCCCchH---------------HHHHhCCCCCHH---------------
Confidence               11      1                 111110000               000000000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                        ++                        ..+.+|   ++.|+.|+|  ++|||||||||+|||++.   .+.+||+|||+
T Consensus       116 --~~------------------------~~i~~q---i~~aL~yLH--~~~iiHrDiKp~NILl~~---~~~~Kl~DFG~  161 (309)
T d1u5ra_         116 --EI------------------------AAVTHG---ALQGLAYLH--SHNMIHRDVKAGNILLSE---PGLVKLGDFGS  161 (309)
T ss_dssp             --HH------------------------HHHHHH---HHHHHHHHH--HTTCBCCCCSGGGEEEET---TTEEEECCCTT
T ss_pred             --HH------------------------HHHHHH---HHHHHHHHH--hCCEeccCCCcceEEECC---CCCEEEeeccc
Confidence              00                        014455   778888988  999999999999999954   45699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |+....            ..+.+||+.|||||++.+.   ....|+.++|||||||++|+|++|.+||.+.+        
T Consensus       162 a~~~~~------------~~~~~GT~~Y~APE~~~~~---~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~--------  218 (309)
T d1u5ra_         162 ASIMAP------------ANSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------  218 (309)
T ss_dssp             CBSSSS------------BCCCCSCGGGCCHHHHTTT---TSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------
T ss_pred             ccccCC------------CCccccCccccCHHHHhcc---CCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC--------
Confidence            975422            2356899999999999632   12469999999999999999999999998653        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                             ....+..+..+....+.  ...+|+++++||.+||++||++|||++|+|+||||...
T Consensus       219 -------~~~~~~~i~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         219 -------AMSALYHIAQNESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             -------HHHHHHHHHHSCCCCCS--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             -------HHHHHHHHHhCCCCCCC--CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence                   12234445444432222  24689999999999999999999999999999999753

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-50  Score=394.94  Aligned_cols=259  Identities=26%  Similarity=0.364  Sum_probs=175.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |.|++ .+.||+|+||+||+|+++.+|+.||||++++....  ..+.+.+|+++|.++ +|||||++++++.+.....  
T Consensus         4 edy~~-~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~--   79 (269)
T d2java1           4 EDYEV-LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTT--   79 (269)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----C--
T ss_pred             hhCEE-eEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCE--
Confidence            45776 47899999999999999999999999999764322  245678999999987 5999999999886532210  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                  +.          -+.+|.-+ +              .+...+...       ..     ....+ ...
T Consensus        80 ------------~~----------ivmEy~~~-g--------------~L~~~i~~~-------~~-----~~~~l-~e~  109 (269)
T d2java1          80 ------------LY----------IVMEYCEG-G--------------DLASVITKG-------TK-----ERQYL-DEE  109 (269)
T ss_dssp             ------------EE----------EEEECCTT-E--------------EHHHHHHHH-------HH-----HTCCC-CHH
T ss_pred             ------------EE----------EEEecCCC-C--------------cHHHHHHhc-------cc-----cCCCC-CHH
Confidence                        00          01222111 0              000000000       00     00000 001


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhC-----CCCCCCCCCceeecCCCCCCCceecc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQG-----IAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~g-----IvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      .+|.                        |..|   ++.++.|+|  ++|     ||||||||+|||++   ..+.+||+|
T Consensus       110 ~~~~------------------------i~~q---i~~al~ylH--~~~~~~~~IiHrDiKp~NIll~---~~~~vkl~D  157 (269)
T d2java1         110 FVLR------------------------VMTQ---LTLALKECH--RRSDGGHTVLHRDLKPANVFLD---GKQNVKLGD  157 (269)
T ss_dssp             HHHH------------------------HHHH---HHHHHHHHH--HHCC---------CCGGGEEEC---TTSCEEECC
T ss_pred             HHHH------------------------HHHH---HHHHHHHHH--HhcCCCCCEEeCcCchhhcCcC---CCCcEEEee
Confidence            1111                        3445   778888888  665     99999999999995   446799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+|+.+.....        ...+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+     
T Consensus       158 FG~a~~~~~~~~--------~~~~~~gt~~Y~APE~l~~------~~~~~~~DIwSlGvilyel~tg~~Pf~~~~-----  218 (269)
T d2java1         158 FGLARILNHDTS--------FAKAFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFS-----  218 (269)
T ss_dssp             HHHHHHC-------------------CCCSCCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----
T ss_pred             ccceeecccCCC--------ccccCCCCcccCCHHHHcC------CCCChHHHHHhhCHHHHHHhhCCCCCCCCC-----
Confidence            999986543221        2346799999999999963      579999999999999999999999998653     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                                ...+...|..+.+...   +..+|+++++||++||+.||.+|||++|+|+|||+
T Consensus       219 ----------~~~~~~~i~~~~~~~~---~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         219 ----------QKELAGKIREGKFRRI---PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             ----------HHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ----------HHHHHHHHHcCCCCCC---CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                      3456777887766432   24689999999999999999999999999999996

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-50  Score=397.48  Aligned_cols=253  Identities=25%  Similarity=0.412  Sum_probs=184.8

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC------CCHHHHHHHHHHHHhhc-CCCCeeeeeeeecc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG------HSRSRVFKEVETFHHCQ-GHPNIIQLLEYYED  117 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~------~~~~~~~~Ei~~l~~~~-~HpnIv~l~~~~~~  117 (539)
                      |.+.|++ +++||+|+||+||+|+++.+|+.||||++++...      ....++.+|+.+|+++. .|||||+++++|++
T Consensus         2 l~~~Y~i-~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           2 LESQYQV-GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             CTTTEEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CCCeEEE-eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            5677887 6899999999999999999999999999965321      11234668999999875 49999999999987


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEA  197 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~  197 (539)
                      ....+   .|                       .++.-+.+              .+...+.....+..+.+.       
T Consensus        81 ~~~~~---lv-----------------------~e~~~~~~--------------~l~~~~~~~~~l~e~~~~-------  113 (273)
T d1xwsa_          81 PDSFV---LI-----------------------LERPEPVQ--------------DLFDFITERGALQEELAR-------  113 (273)
T ss_dssp             SSEEE---EE-----------------------EECCSSEE--------------EHHHHHHHHCSCCHHHHH-------
T ss_pred             CCeEE---EE-----------------------EEeccCcc--------------hHHHHHhccCCCCHHHHH-------
Confidence            65543   11                       11110000              000000000001111010       


Q ss_pred             CCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCcee
Q psy16343        198 SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKL  277 (539)
Q Consensus       198 ~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl  277 (539)
                                                        .|.+|   ++.|+.|+|  ++||+||||||+|||+..+  .+.+||
T Consensus       114 ----------------------------------~~~~q---i~~al~~lH--~~~iiHrDiKp~NIll~~~--~~~vkl  152 (273)
T d1xwsa_         114 ----------------------------------SFFWQ---VLEAVRHCH--NCGVLHRDIKDENILIDLN--RGELKL  152 (273)
T ss_dssp             ----------------------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEETT--TTEEEE
T ss_pred             ----------------------------------HHHHH---HHHHHHHHH--HCCCccccCcccceEEecC--CCeEEE
Confidence                                              14445   777888888  9999999999999999632  346999


Q ss_pred             ccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC
Q psy16343        278 CDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED  357 (539)
Q Consensus       278 ~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~  357 (539)
                      +|||+|+.....          ...+.+||+.|||||++..     ...|+.++|||||||++|+|++|++||.+.    
T Consensus       153 ~DFG~a~~~~~~----------~~~~~~GT~~y~aPE~~~~-----~~~~~~~~DiwSlGvilyell~g~~Pf~~~----  213 (273)
T d1xwsa_         153 IDFGSGALLKDT----------VYTDFDGTRVYSPPEWIRY-----HRYHGRSAAVWSLGILLYDMVCGDIPFEHD----  213 (273)
T ss_dssp             CCCTTCEECCSS----------CBCCCCSCGGGSCHHHHHH-----SCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----
T ss_pred             Cccccceecccc----------cccccccCCCcCCHHHHcC-----CCCCCcccccccceeeehhHhhCCCCCCCc----
Confidence            999998754321          2346799999999999974     234567899999999999999999999652    


Q ss_pred             CCcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCC
Q psy16343        358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA  426 (539)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~  426 (539)
                                       ..+..+.+.++.    .+|++++|||++||.+||++|||++|+|+||||++.
T Consensus       214 -----------------~~i~~~~~~~~~----~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         214 -----------------EEIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             -----------------HHHHHCCCCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             -----------------hHHhhcccCCCC----CCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence                             234556666664    689999999999999999999999999999999753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-49  Score=409.15  Aligned_cols=259  Identities=24%  Similarity=0.362  Sum_probs=184.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC---CCCHHHHHHHH---HHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---GHSRSRVFKEV---ETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~---~~~~~~~~~Ei---~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ .++||+|+||.||+|+++.+|+.||||++.+..   ......+.+|+   ++++.+ +|||||+++++|++...
T Consensus         4 ddy~i-~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           4 NDFSV-HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             TTEEE-EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSE
T ss_pred             HhCee-eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCE
Confidence            34665 578999999999999999999999999996421   11233344554   444443 69999999999987655


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .|      +|.+-                 + +              .+...+.......++             
T Consensus        82 ~~---iv------mE~~~-----------------g-g--------------~L~~~l~~~~~~~e~-------------  107 (364)
T d1omwa3          82 LS---FI------LDLMN-----------------G-G--------------DLHYHLSQHGVFSEA-------------  107 (364)
T ss_dssp             EE---EE------ECCCC-----------------S-C--------------BHHHHHHHHCSCCHH-------------
T ss_pred             EE---EE------EEecC-----------------C-C--------------cHHHHHHhcccccHH-------------
Confidence            44   12      22111                 1 0              011101000000000             


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                          +++                        .|.+|   ++.|+.|+|  ++|||||||||+|||++   ..+.+||+||
T Consensus       108 ----~~~------------------------~~~~q---i~~aL~ylH--~~~iiHrDlKP~NILl~---~~g~iKl~DF  151 (364)
T d1omwa3         108 ----DMR------------------------FYAAE---IILGLEHMH--NRFVVYRDLKPANILLD---EHGHVRISDL  151 (364)
T ss_dssp             ----HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEC---SSSCEEECCC
T ss_pred             ----HHH------------------------HHHHH---HHHHHHHHH--HCCccceeeccceeEEc---CCCcEEEeee
Confidence                010                        13444   777888888  99999999999999994   4567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |+|+.+...          ...+.+||+.|||||++..     ...|+.++|||||||++|+|++|++||.+.+..+   
T Consensus       152 Gla~~~~~~----------~~~~~~GT~~y~APE~~~~-----~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~---  213 (364)
T d1omwa3         152 GLACDFSKK----------KPHASVGTHGYMAPEVLQK-----GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---  213 (364)
T ss_dssp             TTCEECSSS----------CCCSCCSCGGGCCHHHHST-----TCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC---
T ss_pred             ceeeecCCC----------cccccccccccchhHHhhc-----CCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH---
Confidence            999855322          2346799999999999963     3569999999999999999999999998765332   


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCC-----HHHHhcCCCccCCCC
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-----AASVLKHPWISTAGT  428 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~t-----a~e~l~Hpw~~~~~~  428 (539)
                               ...+...+....+.+|    ..+|++++|||.+||++||.+|||     |+|+|+||||++..+
T Consensus       214 ---------~~~~~~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~  273 (364)
T d1omwa3         214 ---------KHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  273 (364)
T ss_dssp             ---------HHHHHHHSSSCCCCCC----SSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCH
T ss_pred             ---------HHHHHHhcccCCCCCC----CCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCH
Confidence                     2234444444444444    479999999999999999999999     799999999988754

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-48  Score=388.48  Aligned_cols=262  Identities=24%  Similarity=0.352  Sum_probs=181.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |.|++ .+.||+|+||+||+|+++.+|+.||||++++...  ....++.+|+++|+++ +|||||+++++|+++...+  
T Consensus         2 d~Y~~-~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~--   77 (298)
T d1gz8a_           2 ENFQK-VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLY--   77 (298)
T ss_dssp             TTEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE--
T ss_pred             CCCEe-ccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEEecccccccccee--
Confidence            45665 4789999999999999999999999999964322  2356788999999986 6999999999998765443  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                       .|      +|.+              +.++.....                 ......+..+.+               
T Consensus        78 -iv------~e~~--------------~~~~~~~~~-----------------~~~~~~l~e~~~---------------  104 (298)
T d1gz8a_          78 -LV------FEFL--------------HQDLKKFMD-----------------ASALTGIPLPLI---------------  104 (298)
T ss_dssp             -EE------EECC--------------SEEHHHHHH-----------------HTTTTCCCHHHH---------------
T ss_pred             -EE------Eeec--------------CCchhhhhh-----------------hhcccCCCHHHH---------------
Confidence             11      1111              000000000                 000000000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                           -.                     +.+|   ++.++.|+|  ++|||||||||+|||+.   ..+.+||+|||+|+
T Consensus       105 -----~~---------------------~~~q---il~~L~yLH--~~~IiHrDiKpeNIl~~---~~~~~kl~DFG~a~  150 (298)
T d1gz8a_         105 -----KS---------------------YLFQ---LLQGLAFCH--SHRVLHRDLKPQNLLIN---TEGAIKLADFGLAR  150 (298)
T ss_dssp             -----HH---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECSTTHHH
T ss_pred             -----HH---------------------HHHH---HHHHHHHhh--cCCEEccccCchheeec---ccCcceeccCCcce
Confidence                 01                     3444   777888888  99999999999999994   44579999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ...+.+||+.|+|||++..     ...++.++|+||+||++|+|++|++||.+.+..        
T Consensus       151 ~~~~~~~--------~~~~~~gt~~y~apE~~~~-----~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~--------  209 (298)
T d1gz8a_         151 AFGVPVR--------TYTHEVVTLWYRAPEILLG-----CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------  209 (298)
T ss_dssp             HHCCCSB--------CTTCCBCCCTTCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------
T ss_pred             eccCCcc--------cceeecccceeeehhhhcc-----ccCCCccccccccchhhhHHhhCCCCCCCCCHH--------
Confidence            5433221        2346789999999999863     234678999999999999999999999876421        


Q ss_pred             cchhhHHHHHHHHhcCC------------------CCCCC-------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGH------------------YDFPE-------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~------------------~~~p~-------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            + .+..+....                  ..++.       ..+..+|++++|||++||++||++|||++|+|+
T Consensus       210 ------~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         210 ------D-QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             ------H-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ------H-HHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                  1 112221100                  00110       012467899999999999999999999999999


Q ss_pred             CCCccCCC
Q psy16343        420 HPWISTAG  427 (539)
Q Consensus       420 Hpw~~~~~  427 (539)
                      ||||+...
T Consensus       283 H~ff~~~~  290 (298)
T d1gz8a_         283 HPFFQDVT  290 (298)
T ss_dssp             SGGGTTCC
T ss_pred             CHhhccCC
Confidence            99998653

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-48  Score=387.48  Aligned_cols=269  Identities=24%  Similarity=0.319  Sum_probs=180.6

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccC-CcEEEEEEeccC--CCCCHHHHHHHHHHHHhhc--CCCCeeeeeeeeccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILT-ELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQ--GHPNIIQLLEYYEDD  118 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t-~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~--~HpnIv~l~~~~~~~  118 (539)
                      +..+.|++ .+.||+|+||+||+|++..+ ++.||||++++.  .......+.+|+.+|+.+.  +|||||+++++|...
T Consensus         4 ~~~~~Y~i-~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~   82 (305)
T d1blxa_           4 RADQQYEC-VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   82 (305)
T ss_dssp             CGGGTEEE-EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             CCcCCEEE-EEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccc
Confidence            34677886 46799999999999999766 567999999642  2222345678888887653  699999999998643


Q ss_pred             ccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       119 ~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      ......           .+.+          +.++.-+....             +.. ......++.+.+         
T Consensus        83 ~~~~~~-----------~~~~----------~~e~~~~~~~~-------------~~~-~~~~~~~~~~~~---------  118 (305)
T d1blxa_          83 RTDRET-----------KLTL----------VFEHVDQDLTT-------------YLD-KVPEPGVPTETI---------  118 (305)
T ss_dssp             ECSSEE-----------EEEE----------EEECCSCBHHH-------------HHH-HSCTTCSCHHHH---------
T ss_pred             ccccCc-----------eEEE----------EEEeccCCchh-------------hhh-hccCCCCCHHHH---------
Confidence            211100           0000          11110000000             000 000000000000         


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceec
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLC  278 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~  278 (539)
                              +   .                     +..|   ++.++.|+|  ++|||||||||+|||+.   ..+.+||+
T Consensus       119 --------~---~---------------------~~~q---i~~aL~yLH--~~~ivHrDiKp~NILi~---~~~~~kl~  158 (305)
T d1blxa_         119 --------K---D---------------------MMFQ---LLRGLDFLH--SHRVVHRDLKPQNILVT---SSGQIKLA  158 (305)
T ss_dssp             --------H---H---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTCCEEEC
T ss_pred             --------H---H---------------------HHHH---HHHHHHHHH--hCCEEecCCCccEEEEc---CCCCeeec
Confidence                    0   0                     3444   677888888  99999999999999995   44569999


Q ss_pred             cCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCC
Q psy16343        279 DFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC  358 (539)
Q Consensus       279 DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~  358 (539)
                      |||+++......         ...+.+||+.|||||++.+      ..|+.++||||+||++|+|++|++||.+.+..  
T Consensus       159 dfg~~~~~~~~~---------~~~~~~gT~~Y~APE~~~~------~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~--  221 (305)
T d1blxa_         159 DFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--  221 (305)
T ss_dssp             SCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred             chhhhhhhcccc---------cCCCcccChhhcCcchhcC------CCCChhehhhchHHHHHHHHHCCCCCCCCCHH--
Confidence            999987543222         2346799999999999963      57999999999999999999999999876421  


Q ss_pred             CcccCccchhhHHHHHHHHhcC-----CCCCC------------------CCCCCCCCHHHHHHHHHhccccccCCCCHH
Q psy16343        359 GWQRGETCHACQEILFHSIQQG-----HYDFP------------------EGEWSTISDEAKDLIRRLLVKDARKRLSAA  415 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~-----~~~~p------------------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~  415 (539)
                                   ..+..|...     ...++                  ...+..+|++++|||++||++||++||||+
T Consensus       222 -------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~  288 (305)
T d1blxa_         222 -------------DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY  288 (305)
T ss_dssp             -------------HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             -------------HHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHH
Confidence                         122222210     00010                  112356899999999999999999999999


Q ss_pred             HHhcCCCccCCC
Q psy16343        416 SVLKHPWISTAG  427 (539)
Q Consensus       416 e~l~Hpw~~~~~  427 (539)
                      |+|+||||+...
T Consensus       289 e~L~Hpff~~i~  300 (305)
T d1blxa_         289 SALSHPYFQDLE  300 (305)
T ss_dssp             HHHTSGGGTTCC
T ss_pred             HHhcChhhcCch
Confidence            999999998654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-46  Score=376.58  Aligned_cols=272  Identities=20%  Similarity=0.252  Sum_probs=177.8

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccC--CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKL--PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~--~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||+||+|++..+|+.||||++.+.  ......++.+|+++|+++ +||||+++++++......+. 
T Consensus        10 ~rY~i-~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~-   86 (318)
T d3blha1          10 SKYEK-LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYN-   86 (318)
T ss_dssp             GGEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-------
T ss_pred             CCEEE-EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-cCCCccceEeeeeccccccc-
Confidence            45665 46899999999999999999999999998643  233456788999999997 59999999998865432210 


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        . .    ..++.+          +.++.-. +              .+......                ...+. ..
T Consensus        87 --~-~----~~~~~i----------v~e~~~~-~--------------~~~~~~~~----------------~~~~~-~~  117 (318)
T d3blha1          87 --R-C----KGSIYL----------VFDFCEH-D--------------LAGLLSNV----------------LVKFT-LS  117 (318)
T ss_dssp             -----------CEEE----------EEECCCE-E--------------HHHHHTCT----------------TCCCC-HH
T ss_pred             --c-c----CceEEE----------EEeccCC-C--------------ccchhhhc----------------ccccc-cH
Confidence              0 0    001100          1111100 0              00000000                00000 00


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .++                        .+.+|   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+++
T Consensus       118 ~~~------------------------~i~~q---il~~l~~lH--~~~ivHrDlKp~NILl~---~~~~~kl~dfg~~~  165 (318)
T d3blha1         118 EIK------------------------RVMQM---LLNGLYYIH--RNKILHRDMKAANVLIT---RDGVLKLADFGLAR  165 (318)
T ss_dssp             HHH------------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             HHH------------------------HHHHH---HHHHHHHhc--cCCEEecCcCchheeec---CCCcEEeeecceee
Confidence            011                        03444   677888888  99999999999999995   44679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .+......    ......+.+||++|+|||++..     ...|+.++||||+||++|+|++|++||.+.+.         
T Consensus       166 ~~~~~~~~----~~~~~~~~~gT~~Y~aPE~~~~-----~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~---------  227 (318)
T d3blha1         166 AFSLAKNS----QPNRYTNRVVTLWYRPPELLLG-----ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE---------  227 (318)
T ss_dssp             ECCC---------CCCCCSCCSCGGGCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---------
T ss_pred             eccccccc----ccccccceecCHHHhhHHHHcC-----CCCCCcHHHcccCCceeeeHhhCCCCCCCCCH---------
Confidence            55432211    1112346789999999999863     34689999999999999999999999987542         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCC----------------------------CCHHHHHHHHHhccccccCCCCHHH
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWST----------------------------ISDEAKDLIRRLLVKDARKRLSAAS  416 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~----------------------------~s~~~~dli~~lL~~dP~~R~ta~e  416 (539)
                            ......+......++...|..                            .+++++|||.+||++||++||||+|
T Consensus       228 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~e  301 (318)
T d3blha1         228 ------QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDD  301 (318)
T ss_dssp             ------HHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             ------HHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHH
Confidence                  122222222222222211111                            3788999999999999999999999


Q ss_pred             HhcCCCccCC
Q psy16343        417 VLKHPWISTA  426 (539)
Q Consensus       417 ~l~Hpw~~~~  426 (539)
                      +|+||||+..
T Consensus       302 lL~Hpff~~~  311 (318)
T d3blha1         302 ALNHDFFWSD  311 (318)
T ss_dssp             HHHSGGGSSS
T ss_pred             HHcChhhccC
Confidence            9999999853

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.8e-46  Score=373.05  Aligned_cols=258  Identities=21%  Similarity=0.313  Sum_probs=174.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      |.|++ .+.||+|+||+||+|+++ +|+.||||++++..  .....++.+|+.+|+++ +|||||+++++|.+....+. 
T Consensus         2 ~~Y~~-~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i-   77 (286)
T d1ob3a_           2 EKYHG-LEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVL-   77 (286)
T ss_dssp             CSEEE-EEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEE-
T ss_pred             CCcee-ccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeE-
Confidence            45665 467999999999999985 78999999996532  22356789999999987 59999999999987654331 


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                       ..+.-+ +              .+.........+..+.+               
T Consensus        78 --~-----------------------~e~~~~-~--------------~~~~~~~~~~~l~~~~~---------------  102 (286)
T d1ob3a_          78 --V-----------------------FEHLDQ-D--------------LKKLLDVCEGGLESVTA---------------  102 (286)
T ss_dssp             --E-----------------------EECCSE-E--------------HHHHHHTSTTCCCHHHH---------------
T ss_pred             --E-----------------------EEeehh-h--------------hHHHHHhhcCCcchhhh---------------
Confidence              1                       000000 0              00000000000111111               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                           -.                     +.+|   ++.++.|+|  ++|||||||||+|||+.   ..+.+||+|||+|.
T Consensus       103 -----~~---------------------i~~q---i~~~L~~LH--~~~IvHrDiKp~NIll~---~~~~~kl~DfG~a~  148 (286)
T d1ob3a_         103 -----KS---------------------FLLQ---LLNGIAYCH--DRRVLHRDLKPQNLLIN---REGELKIADFGLAR  148 (286)
T ss_dssp             -----HH---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTSCEEECCTTHHH
T ss_pred             -----HH---------------------HHHH---HHHHHHHhc--cCcEEecCCCCceeeEc---CCCCEEecccccce
Confidence                 01                     3344   677888888  89999999999999994   44669999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        .....+||+.|+|||++..     ...|+.++|||||||++|+|++|++||.+.+..+       
T Consensus       149 ~~~~~~~--------~~~~~~~~~~y~~pE~~~~-----~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-------  208 (286)
T d1ob3a_         149 AFGIPVR--------KYTHEIVTLWYRAPDVLMG-----SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-------  208 (286)
T ss_dssp             HHCC-----------------CCCTTCCHHHHTT-----CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-------
T ss_pred             ecccCcc--------ccceecccchhhhHHHHhC-----CCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-------
Confidence            5432211        1235579999999999863     3467899999999999999999999998754211       


Q ss_pred             cchhhHHHHHHHHhc--CCC----------------CCC-------CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQ--GHY----------------DFP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~--~~~----------------~~p-------~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                              .+.++..  +.+                .+.       ......+|++++|||++||++||++||||+|+|+
T Consensus       209 --------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         209 --------QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             --------HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --------HHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    1222211  000                000       0112457899999999999999999999999999


Q ss_pred             CCCccC
Q psy16343        420 HPWIST  425 (539)
Q Consensus       420 Hpw~~~  425 (539)
                      ||||+.
T Consensus       281 Hp~f~~  286 (286)
T d1ob3a_         281 HAYFKE  286 (286)
T ss_dssp             SGGGGC
T ss_pred             CcccCc
Confidence            999963

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.8e-45  Score=373.14  Aligned_cols=274  Identities=24%  Similarity=0.331  Sum_probs=185.3

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      ..|.|++ .+.||+|+||+||+|+++.+|+.||||++++.   ...++.+|+++|..+.+||||++++++|+......  
T Consensus        33 ~~d~y~i-~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~--  106 (328)
T d3bqca1          33 NQDDYQL-VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT--  106 (328)
T ss_dssp             CGGGEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS--
T ss_pred             CCcCeEE-EEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCc--
Confidence            4577887 57899999999999999999999999999653   35678899999999878999999999987543211  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                                  +.          -+.++.-+ +              .+......   +..+.                
T Consensus       107 ------------~~----------~v~e~~~~-~--------------~L~~~~~~---l~e~~----------------  130 (328)
T d3bqca1         107 ------------PA----------LVFEHVNN-T--------------DFKQLYQT---LTDYD----------------  130 (328)
T ss_dssp             ------------EE----------EEEECCCS-C--------------BGGGTTTS---CCHHH----------------
T ss_pred             ------------ee----------EEEeecCC-C--------------cHHHHhcC---CCHHH----------------
Confidence                        00          01121100 0              01000000   00000                


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                          +-.                     +.+|   ++.|+.|+|  ++|||||||||+|||+..++  ..+||+|||+|+
T Consensus       131 ----i~~---------------------i~~q---il~aL~~LH--~~gIvHrDiKp~NILi~~~~--~~vkl~DFG~a~  178 (328)
T d3bqca1         131 ----IRF---------------------YMYE---ILKALDYCH--SMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAE  178 (328)
T ss_dssp             ----HHH---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEETTT--TEEEECCGGGCE
T ss_pred             ----HHH---------------------HHHH---HHHHHHHHh--hcccccccccccceEEcCCC--Ceeeecccccce
Confidence                001                     3344   677888888  99999999999999996433  358999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCC-CCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~-~~~~~~  363 (539)
                      ......         ...+.+||+.|+|||++.+     ...|+.++||||+||++|+|++|..||....... +.....
T Consensus       179 ~~~~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~  244 (328)
T d3bqca1         179 FYHPGQ---------EYNVRVASRYFKGPELLVD-----YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  244 (328)
T ss_dssp             ECCTTC---------CCCSCCSCGGGCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             eccCCC---------cccccccCccccCcccccC-----CCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHH
Confidence            543322         2346789999999999864     3468999999999999999999999997653210 000000


Q ss_pred             ccchhhHHHHHHHHhcCCC--------------------CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCc
Q psy16343        364 ETCHACQEILFHSIQQGHY--------------------DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI  423 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~--------------------~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~  423 (539)
                      .....  ......+.....                    .++...+..+|++++|||++||++||++||||+|+|+||||
T Consensus       245 ~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F  322 (328)
T d3bqca1         245 KVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF  322 (328)
T ss_dssp             HHHCH--HHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHCC--chhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            00000  000000110000                    01122334589999999999999999999999999999999


Q ss_pred             cCCCC
Q psy16343        424 STAGT  428 (539)
Q Consensus       424 ~~~~~  428 (539)
                      ++..+
T Consensus       323 ~~v~~  327 (328)
T d3bqca1         323 YTVVK  327 (328)
T ss_dssp             TTSCC
T ss_pred             CCCCC
Confidence            87543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=382.53  Aligned_cols=280  Identities=24%  Similarity=0.307  Sum_probs=180.7

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|.+.|++ .+.||+|+||+||+|.++.+|+.||||++++....  ...++.+|+++|+.+ +|||||+++++|......
T Consensus        15 ~~~~~Y~~-i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~   92 (346)
T d1cm8a_          15 EVRAVYRD-LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETL   92 (346)
T ss_dssp             CCBSSEEE-EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSST
T ss_pred             ecCCcEEE-EEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCccc
Confidence            37788886 47899999999999999999999999999754322  245688999999997 599999999999765432


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      ....         .-++           +.++. + .              .+...... .-+..+              
T Consensus        93 ~~~~---------~~~l-----------v~e~~-~-~--------------~l~~~~~~-~~l~~~--------------  121 (346)
T d1cm8a_          93 DDFT---------DFYL-----------VMPFM-G-T--------------DLGKLMKH-EKLGED--------------  121 (346)
T ss_dssp             TTCC---------CCEE-----------EEECC-S-E--------------EHHHHHHH-CCCCHH--------------
T ss_pred             cccc---------eEEE-----------EEecc-c-c--------------cHHHHHHh-ccccHH--------------
Confidence            2100         0011           12221 0 0              00000000 000000              


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                         .++   .                     +.+|   ++.|+.|+|  ++|||||||||+|||+.   ..+.+||+|||
T Consensus       122 ---~~~---~---------------------~~~q---i~~aL~~LH--~~~IiHrDiKp~NIL~~---~~~~~kl~Dfg  166 (346)
T d1cm8a_         122 ---RIQ---F---------------------LVYQ---MLKGLRYIH--AAGIIHRDLKPGNLAVN---EDCELKILDFG  166 (346)
T ss_dssp             ---HHH---H---------------------HHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCCT
T ss_pred             ---HHH---H---------------------HHHH---HHHHHHHHH--hCCCcccccCcchhhcc---ccccccccccc
Confidence               000   1                     3444   677888888  99999999999999994   45669999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~  361 (539)
                      +|+....           ...+.+||+.|+|||++.+     ...|+.++||||+||++|+|++|++||.+.+..+....
T Consensus       167 ~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~  230 (346)
T d1cm8a_         167 LARQADS-----------EMTGYVVTRWYRAPEVILN-----WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE  230 (346)
T ss_dssp             TCEECCS-----------SCCSSCSCGGGCCTHHHHT-----TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             ceeccCC-----------ccccccccccccCHHHHcC-----CCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHH
Confidence            9975432           2346789999999999864     24578999999999999999999999987642211000


Q ss_pred             cCccchhhHH--------HHHHHHhcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        362 RGETCHACQE--------ILFHSIQQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       362 ~~~~~~~~~~--------~~~~~i~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..........        ........+...+...    ....+|++++|||++||+.||++||||+|+|+||||+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            0000000000        0000111111122221    2246899999999999999999999999999999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-46  Score=371.35  Aligned_cols=267  Identities=24%  Similarity=0.358  Sum_probs=180.0

Q ss_pred             cccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCC---HHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        44 ~f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~---~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      .+.+.|++ .+.||+|+||.||+|+++.+|+.||||++++.....   ..++.+|++++..+ +|||||++++++.+...
T Consensus         4 ~l~drY~i-~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~   81 (277)
T d1o6ya_           4 HLSDRYEL-GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETP   81 (277)
T ss_dssp             EETTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECS
T ss_pred             CccceeEE-eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccC
Confidence            35677887 578999999999999999999999999997543322   34678999999986 69999999999876432


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      ...   .         +          .-+.+|.-+ +              .+...+.....+.++.+           
T Consensus        82 ~~~---~---------~----------~lvmE~~~g-~--------------~L~~~~~~~~~l~~~~~-----------  113 (277)
T d1o6ya_          82 AGP---L---------P----------YIVMEYVDG-V--------------TLRDIVHTEGPMTPKRA-----------  113 (277)
T ss_dssp             SSE---E---------E----------EEEEECCCE-E--------------EHHHHHHHHCSCCHHHH-----------
T ss_pred             CCc---e---------E----------EEEEECCCC-C--------------EehhhhcccCCCCHHHH-----------
Confidence            100   0         0          001222111 0              00000000000011100           


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                                                    ..+.+|   ++.++.|+|  ++|||||||||+|||+..   .+.++|+||
T Consensus       114 ------------------------------~~i~~q---i~~al~~lH--~~~iiHrDiKP~NIll~~---~~~~~l~d~  155 (277)
T d1o6ya_         114 ------------------------------IEVIAD---ACQALNFSH--QNGIIHRDVKPANIMISA---TNAVKVMDF  155 (277)
T ss_dssp             ------------------------------HHHHHH---HHHHHHHHH--HTTEECCCCSGGGEEEET---TSCEEECCC
T ss_pred             ------------------------------HHHHHH---HHHHHHHHH--hCCccCccccCcccccCc---cccceeehh
Confidence                                          014455   778888888  999999999999999954   455899999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCc
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW  360 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~  360 (539)
                      |++........     ......+.+||+.|||||++.+      ..|+.++|||||||++|+|++|++||.+.+      
T Consensus       156 ~~~~~~~~~~~-----~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DiwSlGvilyelltG~~Pf~~~~------  218 (277)
T d1o6ya_         156 GIARAIADSGN-----SVTQTAAVIGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDS------  218 (277)
T ss_dssp             TTCEECC---------------------TTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------
T ss_pred             hhhhhhccccc-----cccccccccCcccccCHHHHcC------CCCCcceecccchHHHHHHHhCCCCCCCcC------
Confidence            99865432221     1113456799999999999863      579999999999999999999999998753      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCcc
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS  424 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~  424 (539)
                               ...++..+..+.+.+|...+..+|+++++||.+||++||++||+..+.+.|+|++
T Consensus       219 ---------~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         219 ---------PVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             ---------HHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence                     2334555556666666666788999999999999999999999555555677753

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-46  Score=378.76  Aligned_cols=283  Identities=22%  Similarity=0.308  Sum_probs=181.9

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .+.|++ .+.||+|+||+||+|+++.+|+.||||+|++... ....++.+|+++|+.+ +|||||++++++.......  
T Consensus         7 ~~rY~~-~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~~--   82 (345)
T d1pmea_           7 GPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQ--   82 (345)
T ss_dssp             CTTEEE-EEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTT--
T ss_pred             CCCeEE-EEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeeccccc--
Confidence            356775 4789999999999999999999999999976432 2345788999999997 6999999999886653211  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                               ..++.+           ..+..+ +              .+...+.. ..++.+.+               
T Consensus        83 ---------~~~~~l-----------~~~~~~-g--------------~L~~~l~~-~~l~~~~i---------------  111 (345)
T d1pmea_          83 ---------MKDVYL-----------VTHLMG-A--------------DLYKLLKT-QHLSNDHI---------------  111 (345)
T ss_dssp             ---------CCCEEE-----------EEECCC-E--------------EHHHHHHH-CCCCHHHH---------------
T ss_pred             ---------cceEEE-----------EEeecC-C--------------chhhhhhc-CCCCHHHH---------------
Confidence                     011111           111000 0              01110000 00000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                           -                     .+..|   ++.|+.|+|  ++|||||||||+|||+.   ..+.+||+|||+|+
T Consensus       112 -----~---------------------~i~~q---il~al~yLH--~~~iiHRDIKp~NILl~---~~~~~kl~DfG~a~  157 (345)
T d1pmea_         112 -----C---------------------YFLYQ---ILRGLKYIH--SANVLHRDLKPSNLLLN---TTCDLKICDFGLAR  157 (345)
T ss_dssp             -----H---------------------HHHHH---HHHHHHHHH--HTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             -----H---------------------HHHHH---HHHHHHHHH--HCCCcCCCCCcceEEEC---CCCCEEEcccCcee
Confidence                 0                     14445   777888888  99999999999999994   44679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ........     .....+.+||+.|+|||++..     ...|+.++||||+||++|+|++|.+||.+.+..+..+....
T Consensus       158 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~  227 (345)
T d1pmea_         158 VADPDHDH-----TGFLTEYVATRWYRAPEIMLN-----SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG  227 (345)
T ss_dssp             ECCGGGCB-----CCTTCCCCSCGGGCCGGGTTT-----BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             eccCCCcc-----ceeeccccccceechHHHhhc-----CCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhh
Confidence            54332211     112456799999999999863     35688999999999999999999999987642211000000


Q ss_pred             cchhh-HH--------HHHHHHhcCCCC--CC-CCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        365 TCHAC-QE--------ILFHSIQQGHYD--FP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       365 ~~~~~-~~--------~~~~~i~~~~~~--~p-~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ..... ..        ........-...  .+ ...+..+|++++|||.+||++||++||||+|+|+||||+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         228 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             HHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             hccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            00000 00        000000000000  00 012457899999999999999999999999999999998543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-45  Score=376.57  Aligned_cols=279  Identities=20%  Similarity=0.245  Sum_probs=177.9

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |.. .++||+|+||+||+|+++.+|+.||||++.+...    ...+|+++|+++ +|||||+++++|.........    
T Consensus        22 Y~~-~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~----   91 (350)
T d1q5ka_          22 YTD-TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDE----   91 (350)
T ss_dssp             EEE-EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSC----
T ss_pred             cEe-eeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhc-CCCCCCcEEEEEEecCccCCc----
Confidence            443 4789999999999999999999999999965432    224799999987 699999999988543211000    


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                            ..+          .-+.+++-+ +.               ..      +     +.                  
T Consensus        92 ------~~~----------~lv~Ey~~~-~~---------------~~------~-----l~------------------  110 (350)
T d1q5ka_          92 ------VYL----------NLVLDYVPE-TV---------------YR------V-----AR------------------  110 (350)
T ss_dssp             ------CEE----------EEEEECCSE-EH---------------HH------H-----HH------------------
T ss_pred             ------eEE----------EEEEeccCC-cc---------------HH------H-----HH------------------
Confidence                  000          011222100 00               00      0     00                  


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                            .......++..  .....|.+|   ++.|+.|+|  ++||+||||||+|||+..++  ..+||+|||+++.+..
T Consensus       111 ------~~~~~~~~l~~--~~~~~i~~q---il~aL~yLH--~~~IiHrDiKp~NILl~~~~--~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_         111 ------HYSRAKQTLPV--IYVKLYMYQ---LFRSLAYIH--SFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             ------HHHHTTCCCCH--HHHHHHHHH---HHHHHHHHH--TTTEECCCCCGGGEEECTTT--CCEEECCCTTCEECCT
T ss_pred             ------hhhhccCCCCH--HHHHHHHHH---HHHHHHHHH--hcCCcccCCCcceEEEecCC--CceeEecccchhhccC
Confidence                  00000000000  000014445   778888888  99999999999999995432  3589999999876543


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ..         ...+.+||+.|+|||++.+     ...|+.++||||+||++|+|++|++||.+.+..+...........
T Consensus       176 ~~---------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~  241 (350)
T d1q5ka_         176 GE---------PNVSYICSRYYRAPELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT  241 (350)
T ss_dssp             TS---------CCCSCCSCTTSCCHHHHTT-----CSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCC
T ss_pred             Cc---------ccccccccccccChHHhhc-----ccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            22         2346799999999999863     346899999999999999999999999876422110000000000


Q ss_pred             hHHHHHHHHhc--CCCCCCC--------CCCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        369 CQEILFHSIQQ--GHYDFPE--------GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       369 ~~~~~~~~i~~--~~~~~p~--------~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ...........  ....++.        ..+..++++++|||++||++||++||||.|+|+||||....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             CCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             ChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            00001111100  1112221        12346799999999999999999999999999999998653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-46  Score=377.54  Aligned_cols=264  Identities=31%  Similarity=0.445  Sum_probs=187.3

Q ss_pred             chhcccCceeceeCceEEEEEEEc---cCCcEEEEEEeccCC----CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI---LTELEYAVKIIDKLP----GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDE  119 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~---~t~~~vAvK~i~k~~----~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~  119 (539)
                      +.|++ .+.||+|+||.||+|++.   .+|+.||||++++..    ......+.+|+++|.++.+||||+++++++++..
T Consensus        24 ~~y~~-~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          24 ENFEL-LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGEEE-EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hceEE-EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            56776 578999999999999874   478999999996432    2234567899999999876799999999998765


Q ss_pred             cccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       120 ~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..+   .+      +|.+.                 + +              .+...+-..... +|.           
T Consensus       103 ~~~---~v------~e~~~-----------------~-~--------------~L~~~i~~~~~~-~e~-----------  129 (322)
T d1vzoa_         103 KLH---LI------LDYIN-----------------G-G--------------ELFTHLSQRERF-TEH-----------  129 (322)
T ss_dssp             EEE---EE------ECCCC-----------------S-C--------------BHHHHHHHHSCC-CHH-----------
T ss_pred             cee---ee------eeccc-----------------c-c--------------HHHHHHHhcccc-cHH-----------
Confidence            543   11      11110                 0 0              000000000000 010           


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                           +++                        .+.+|   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|
T Consensus       130 -----~~~------------------------~~~~Q---i~~al~~lH--~~~ivHrDiKp~Nill~---~~~~vkL~D  172 (322)
T d1vzoa_         130 -----EVQ------------------------IYVGE---IVLALEHLH--KLGIIYRDIKLENILLD---SNGHVVLTD  172 (322)
T ss_dssp             -----HHH------------------------HHHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTSCEEESC
T ss_pred             -----HHH------------------------HHHHH---HHHHHHHhh--cCCEEeccCCccceeec---CCCCEEEee
Confidence                 000                        03445   777888888  99999999999999995   446799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG  359 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~  359 (539)
                      ||+|+.+.....       ....+.+||+.|+|||++..    ....|+.++|||||||+||+|++|.+||.+.+..+. 
T Consensus       173 FG~a~~~~~~~~-------~~~~~~~g~~~~~~pe~~~~----~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-  240 (322)
T d1vzoa_         173 FGLSKEFVADET-------ERAYDFCGTIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-  240 (322)
T ss_dssp             SSEEEECCGGGG-------GGGCGGGSCCTTCCHHHHTT----CC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-
T ss_pred             ccchhhhccccc-------ccccccccccccchhHHhhc----CCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence            999875433221       12346789999999999963    123578899999999999999999999988754431 


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCC-----CHHHHhcCCCccCCC
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHPWISTAG  427 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~-----ta~e~l~Hpw~~~~~  427 (539)
                                ...+........+.+|    ..+|+++++||++||++||++||     ||+|+|+||||+...
T Consensus       241 ----------~~~i~~~~~~~~~~~~----~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         241 ----------QAEISRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             ----------HHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             ----------HHHHHHhcccCCCCCc----ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence                      2334444445555555    36899999999999999999999     589999999998754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-45  Score=375.00  Aligned_cols=279  Identities=25%  Similarity=0.300  Sum_probs=180.1

Q ss_pred             ccchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        45 f~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.+.|++ .+.||+|+||+||+|+++.+|+.||||++++....  ...++.+|+++|+++ +|||||+++++|.......
T Consensus        16 ~~~rY~i-~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~   93 (348)
T d2gfsa1          16 VPERYQN-LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE   93 (348)
T ss_dssp             EETTEEE-EEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTT
T ss_pred             CCCCeEE-EEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeccccc
Confidence            4577886 57899999999999999999999999999754322  234678999999997 5999999999986543221


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                      ..           +.          .-|..+-.+ +              .+...+.. ..+..+               
T Consensus        94 ~~-----------~~----------~~i~~~~~g-g--------------~L~~~~~~-~~l~e~---------------  121 (348)
T d2gfsa1          94 EF-----------ND----------VYLVTHLMG-A--------------DLNNIVKC-QKLTDD---------------  121 (348)
T ss_dssp             TC-----------CC----------CEEEEECCS-E--------------EHHHHHTT-CCCCHH---------------
T ss_pred             cC-----------ce----------EEEEEeecC-C--------------chhhhccc-ccccHH---------------
Confidence            00           00          011111001 0              00000000 000000               


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                           .+-.                     +.+|   ++.|+.|+|  ++||+||||||+|||+.   ..+.+|++|||+
T Consensus       122 -----~~~~---------------------i~~q---il~aL~~LH--~~giiHrDiKp~NILi~---~~~~~kl~dfg~  167 (348)
T d2gfsa1         122 -----HVQF---------------------LIYQ---ILRGLKYIH--SADIIHRDLKPSNLAVN---EDCELKILDFGL  167 (348)
T ss_dssp             -----HHHH---------------------HHHH---HHHHHHHHH--HTTCCCCCCCGGGEEEC---TTCCEEECCC--
T ss_pred             -----HHHH---------------------HHHH---HHHHHHHHH--hCCCcccccCCcccccc---ccccccccccch
Confidence                 0011                     3444   677888888  99999999999999994   446699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~  362 (539)
                      |.....           ...+.+||+.|+|||++.+     ...|+.++|||||||++|+|++|.+||.+.+..+.....
T Consensus       168 a~~~~~-----------~~~~~~g~~~y~apE~~~~-----~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i  231 (348)
T d2gfsa1         168 ARHTDD-----------EMTGYVATRWYRAPEIMLN-----WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI  231 (348)
T ss_dssp             --CCTG-----------GGSSSCHHHHTSCHHHHTT-----CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             hcccCc-----------ccccccccccccCchhhcC-----CccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            875432           2346789999999999763     245788999999999999999999999876422100000


Q ss_pred             Ccc--------chhhHHHHHHHHhcCCCCCCCC----CCCCCCHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        363 GET--------CHACQEILFHSIQQGHYDFPEG----EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       363 ~~~--------~~~~~~~~~~~i~~~~~~~p~~----~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      ...        ...................+..    .+..+|++++|||++||++||.+||||+|+|+||||+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         232 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             HHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence            000        0000000000001111112221    1356899999999999999999999999999999998654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-44  Score=359.04  Aligned_cols=261  Identities=21%  Similarity=0.251  Sum_probs=179.2

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .+.||+|+||+||+|+++.+++.||||++++...  ....++.+|+.+|+++ +|||||+++++|.+....+. 
T Consensus         2 ~ry~~-i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~i-   78 (292)
T d1unla_           2 QKYEK-LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTL-   78 (292)
T ss_dssp             CSEEE-EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE-
T ss_pred             CCCEe-eeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeE-
Confidence            35665 4689999999999999999999999999964332  3356788999999986 69999999999987654331 


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                        +                       ..+..+ +              .+......                ....    
T Consensus        79 --v-----------------------~~~~~~-~--------------~l~~~~~~----------------~~~~----   98 (292)
T d1unla_          79 --V-----------------------FEFCDQ-D--------------LKKYFDSC----------------NGDL----   98 (292)
T ss_dssp             --E-----------------------EECCSE-E--------------HHHHHHHT----------------TTCC----
T ss_pred             --E-----------------------eeeccc-c--------------cccccccc----------------cccc----
Confidence              1                       000000 0              00000000                0000    


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      .....-.                     +.+|   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+|+
T Consensus        99 ~~~~~~~---------------------~~~q---~~~aL~~lH--~~~IvHrDiKP~NIli~~---~~~~kl~DFG~a~  149 (292)
T d1unla_          99 DPEIVKS---------------------FLFQ---LLKGLGFCH--SRNVLHRDLKPQNLLINR---NGELKLANFGLAR  149 (292)
T ss_dssp             CHHHHHH---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEECT---TCCEEECCCTTCE
T ss_pred             chhHHHH---------------------HHHH---HHHHHHHhh--cCCEeeecccCccccccc---CCceeeeecchhh
Confidence            0000001                     3444   677888888  999999999999999954   4569999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......        ......+++.|+|||++..     ...|+.++||||+||++|+|++|..||......        
T Consensus       150 ~~~~~~~--------~~~~~~~~~~~~~pe~~~~-----~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~--------  208 (292)
T d1unla_         150 AFGIPVR--------CYSAEVVTLWYRPPDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--------  208 (292)
T ss_dssp             ECCSCCS--------CCCSCCSCGGGCCHHHHTT-----CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH--------
T ss_pred             cccCCCc--------cceeeccccchhhhhHhcc-----CCCCCchhhccccchHHHHHhhCCCCCCCCCCH--------
Confidence            6543221        1234578899999999863     235789999999999999999999887543211        


Q ss_pred             cchhhHHHHHHHHhcCCCC-------------------------CCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYD-------------------------FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~-------------------------~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                            ...+..+......                         ........+|++++|||++||++||.+||||+|+|+
T Consensus       209 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         209 ------DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             ------HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ------HHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  1122222210000                         001123457899999999999999999999999999


Q ss_pred             CCCccCC
Q psy16343        420 HPWISTA  426 (539)
Q Consensus       420 Hpw~~~~  426 (539)
                      ||||+..
T Consensus       283 Hp~f~~~  289 (292)
T d1unla_         283 HPYFSDF  289 (292)
T ss_dssp             SGGGSSC
T ss_pred             ChhhcCC
Confidence            9999754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-44  Score=365.16  Aligned_cols=276  Identities=19%  Similarity=0.283  Sum_probs=176.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCc-----EEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTEL-----EYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~-----~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ +++||+|+||+||+|++..+++     .||||++.+. .......+.+|+.+|.++.+|||||++++++.+...
T Consensus        37 ~~~~l-~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          37 ENLEF-GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEE-eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            44555 5789999999999999876553     6999998643 233456788999999998789999999999987654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccc-cccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl-~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+   .|      +|.+-              .|- ...+........          .....|..   ...+..     
T Consensus       116 ~~---lv------~Ey~~--------------~g~L~~~l~~~~~~~~----------~~~~~~~~---~~~~~~-----  154 (325)
T d1rjba_         116 IY---LI------FEYCC--------------YGDLLNYLRSKREKFS----------EDEIEYEN---QKRLEE-----  154 (325)
T ss_dssp             CE---EE------EECCT--------------TCBHHHHHHTTTTCC---------------------------------
T ss_pred             EE---EE------EEcCC--------------CCcHHHHHHhccCCCc----------chhhhhcc---cccccc-----
Confidence            33   11      11110              000 000000000000          00000000   000000     


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                       .......+...++                  .+..|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|
T Consensus       155 -~~~~~~l~~~~~~------------------~i~~q---i~~gl~yLH--~~~IiHRDlKp~Nill~---~~~~~Kl~D  207 (325)
T d1rjba_         155 -EEDLNVLTFEDLL------------------CFAYQ---VAKGMEFLE--FKSCVHRDLAARNVLVT---HGKVVKICD  207 (325)
T ss_dssp             -------CCHHHHH------------------HHHHH---HHHHHHHHH--HTTEEETTCSGGGEEEE---TTTEEEECC
T ss_pred             -ccccCCCCHHHHH------------------HHHHH---HHHHHHHHH--hCCeeeccCchhccccc---cCCeEEEee
Confidence             0000000000000                  13344   777888888  99999999999999995   345699999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+|+........      ....+.+||+.|||||++..      ..|+.++||||+||++|+|++ |.+||.+.+..  
T Consensus       208 FGla~~~~~~~~~------~~~~~~~gt~~y~aPE~l~~------~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~--  273 (325)
T d1rjba_         208 FGLARDIMSDSNY------VVRGNARLPVKWMAPESLFE------GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD--  273 (325)
T ss_dssp             CGGGSCGGGCTTS------EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--
T ss_pred             ccccccccCCCce------eeeccccCCCccCChHHHcC------CCCCcceeccchhHHHHHHHhCCCCCCCCCCHH--
Confidence            9999865432211      12246689999999999974      469999999999999999997 89999875422  


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  +.+. .+....+.++.  +..+|+++++||.+||+.||++|||++|+++|
T Consensus       274 ------------~~~~-~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         274 ------------ANFY-KLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             ------------HHHH-HHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------HHHH-HHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                        2233 33334344332  24689999999999999999999999999976

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-44  Score=352.87  Aligned_cols=255  Identities=21%  Similarity=0.282  Sum_probs=170.3

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCC--CCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~--~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|.+ ++.||+|+||+||+|+.   +..||||+++...  ....+.+.+|+++|.++ +|||||++++++.++.. +  
T Consensus         8 ~~~~~-~~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~~~~-~--   79 (276)
T d1uwha_           8 GQITV-GQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTAPQL-A--   79 (276)
T ss_dssp             TCCCC-CSEEEECSSCEEEEEES---SSEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSC-E--
T ss_pred             ccEEE-EEEEeeCCCcEEEEEEE---CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEeccEE-E--
Confidence            34554 67899999999999964   3469999996432  23456788999999997 59999999987654321 1  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCC-CCcccccccccccCCCCCCCCcc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS-AEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt-~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        +                      +.+|.-+ +              .+...+.. ...+.++.+              
T Consensus        80 --l----------------------v~Ey~~~-g--------------~L~~~l~~~~~~~~~~~~--------------  106 (276)
T d1uwha_          80 --I----------------------VTQWCEG-S--------------SLYHHLHIIETKFEMIKL--------------  106 (276)
T ss_dssp             --E----------------------EEECCCE-E--------------EHHHHHHTSCCCCCHHHH--------------
T ss_pred             --E----------------------EEecCCC-C--------------CHHHHHhhccCCCCHHHH--------------
Confidence              1                      1122100 0              00000000 000000000              


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                                                 ..+..|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|||+|
T Consensus       107 ---------------------------~~i~~q---i~~gl~yLH--~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla  151 (276)
T d1uwha_         107 ---------------------------IDIARQ---TAQGMDYLH--AKSIIHRDLKSNNIFLH---EDLTVKIGDFGLA  151 (276)
T ss_dssp             ---------------------------HHHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEE---TTSSEEECCCCCS
T ss_pred             ---------------------------HHHHHH---HHHHHHHHh--cCCEeccccCHHHEEEc---CCCCEEEccccce
Confidence                                       003344   778888888  99999999999999995   4456999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~  363 (539)
                      +.......      .....+.+||+.|||||++...   ....|+.++||||+||++|+|++|+.||.+.+.        
T Consensus       152 ~~~~~~~~------~~~~~~~~gt~~y~APE~l~~~---~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~--------  214 (276)
T d1uwha_         152 TVKSRWSG------SHQFEQLSGSILWMAPEVIRMQ---DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN--------  214 (276)
T ss_dssp             CC------------------CCCCGGGCCHHHHTTC---SSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------
T ss_pred             eeccccCC------cccccccccCcccCCHHHHhcc---cCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh--------
Confidence            75432211      1123567899999999999631   124589999999999999999999999987532        


Q ss_pred             ccchhhHHHHHHHHhcCCCCC-CCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        364 ETCHACQEILFHSIQQGHYDF-PEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~~~~-p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                            ...+...+..+.... ....+..+++++++||.+||..||++|||++|+++|
T Consensus       215 ------~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         215 ------RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             ------HHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------HHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                  233444454443221 122345789999999999999999999999999976

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.5e-44  Score=355.72  Aligned_cols=250  Identities=20%  Similarity=0.242  Sum_probs=175.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||+||+|+++.+++.||||++++.. ...+++.+|+++|.++ +|||||+++++|.++...+   .
T Consensus        17 ~~~~~-~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~---i   90 (287)
T d1opja_          17 TDITM-KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFY---I   90 (287)
T ss_dssp             GGEEE-EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE---E
T ss_pred             HHeEE-eeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhC-CCCCEecCCccEeeCCeeE---E
Confidence            34554 578999999999999999999999999996543 3467899999999997 5999999999997765433   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC--CCCCcccccccccccCCCCCCCCccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV--GSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~--gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      |      +                 +|.-+ +              .+...+  .....+ +|                 
T Consensus        91 v------~-----------------E~~~~-g--------------~l~~~l~~~~~~~~-~~-----------------  114 (287)
T d1opja_          91 I------T-----------------EFMTY-G--------------NLLDYLRECNRQEV-SA-----------------  114 (287)
T ss_dssp             E------E-----------------ECCTT-C--------------BHHHHHHHSCTTTS-CH-----------------
T ss_pred             E------e-----------------ecccC-c--------------chHHHhhhccccch-HH-----------------
Confidence            1      1                 11000 0              000000  000000 00                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                           ..++                  .+..|   ++.|+.|+|  ++||+||||||+|||++   ..+.+||+|||+|+
T Consensus       115 -----~~~~------------------~i~~q---i~~gL~yLH--~~~iiHrDlKp~NILl~---~~~~~Kl~DFG~a~  163 (287)
T d1opja_         115 -----VVLL------------------YMATQ---ISSAMEYLE--KKNFIHRDLAARNCLVG---ENHLVKVADFGLSR  163 (287)
T ss_dssp             -----HHHH------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCCCCTT
T ss_pred             -----HHHH------------------HHHHH---HHHHHHHHH--HCCcccCccccCeEEEC---CCCcEEEcccccee
Confidence                 0000                  03344   778888888  99999999999999994   44679999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      .......       .......||+.|||||++..      ..|+.++||||+||++|+|++|..||.....         
T Consensus       164 ~~~~~~~-------~~~~~~~g~~~y~aPE~~~~------~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~---------  221 (287)
T d1opja_         164 LMTGDTY-------TAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGID---------  221 (287)
T ss_dssp             TCCSSSS-------EEETTEEECGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC---------
T ss_pred             ecCCCCc-------eeeccccccccccChHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCcch---------
Confidence            6533221       11224468999999999874      4699999999999999999997666543321         


Q ss_pred             cchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                           ...++..+..+ +..+  .+..+++++++||.+||..||++|||++|+++
T Consensus       222 -----~~~~~~~i~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         222 -----LSQVYELLEKD-YRME--RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             -----HHHHHHHHHTT-CCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----HHHHHHHHhcC-CCCC--CCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                 23355555544 2222  23478999999999999999999999999975

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-44  Score=364.56  Aligned_cols=275  Identities=22%  Similarity=0.301  Sum_probs=170.9

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCC--CHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~--~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      +.|++ .++||+|+||+||+|+++.+|+.||||++.+....  ...++.+|+.+|+++ +|||||+++++|........ 
T Consensus        17 ~~Y~i-~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~~-   93 (355)
T d2b1pa1          17 KRYQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEE-   93 (355)
T ss_dssp             TTEEE-EEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTT-
T ss_pred             CCeEE-EEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeccccccc-
Confidence            56876 47899999999999999999999999999754322  234688999999997 69999999999865432110 


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCccc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                               ..++.          -+.++.-+ +               ++....  .++..                  
T Consensus        94 ---------~~~~~----------iv~Ey~~~-~---------------l~~~~~--~~~~~------------------  118 (355)
T d2b1pa1          94 ---------FQDVY----------LVMELMDA-N---------------LCQVIQ--MELDH------------------  118 (355)
T ss_dssp             ---------CCEEE----------EEEECCSE-E---------------HHHHHT--SCCCH------------------
T ss_pred             ---------CceeE----------EEEeccch-H---------------HHHhhh--cCCCH------------------
Confidence                     00110          11122101 0               000000  00000                  


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                        ..+-.                     +.+|   ++.++.|+|  ++||+||||||+|||+..   .+.+|++|||+++
T Consensus       119 --~~i~~---------------------~~~q---il~gl~~LH--~~giiHrDlKP~Nil~~~---~~~~kl~df~~~~  167 (355)
T d2b1pa1         119 --ERMSY---------------------LLYQ---MLCGIKHLH--SAGIIHRDLKPSNIVVKS---DCTLKILDFGLAR  167 (355)
T ss_dssp             --HHHHH---------------------HHHH---HHHHHHHHH--HTTCCCSCCCGGGEEECT---TCCEEECCCCC--
T ss_pred             --HHHHH---------------------HHHH---HHHHHHHhh--hcccccccCCcccccccc---ccceeeechhhhh
Confidence              00111                     3344   667788888  999999999999999954   4568999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccC-
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG-  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~-  363 (539)
                      ......         .....+||+.|+|||++.+      ..|+.++||||+||++|+|++|++||.+.+..+...... 
T Consensus       168 ~~~~~~---------~~~~~~~t~~y~aPE~l~~------~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~  232 (355)
T d2b1pa1         168 TAGTSF---------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE  232 (355)
T ss_dssp             ----------------------CCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cccccc---------ccccccccccccChhhhcC------CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHH
Confidence            544322         2245689999999999963      578999999999999999999999998764221100000 


Q ss_pred             -------ccchhhHHHHHHHHhcCCCCCCCC----------------CCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        364 -------ETCHACQEILFHSIQQGHYDFPEG----------------EWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       364 -------~~~~~~~~~~~~~i~~~~~~~p~~----------------~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             +.... .......+..........                .+..+|++++|||++||.+||++||||+|+|+|
T Consensus       233 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         233 QLGTPCPEFMKK-LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHCCCCHHHHTT-SCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hccCCCHHHHHH-hhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                   00000 000011111111111111                012257889999999999999999999999999


Q ss_pred             CCccCC
Q psy16343        421 PWISTA  426 (539)
Q Consensus       421 pw~~~~  426 (539)
                      |||+..
T Consensus       312 pw~~~~  317 (355)
T d2b1pa1         312 PYINVW  317 (355)
T ss_dssp             TTTGGG
T ss_pred             cccCCC
Confidence            999853

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-44  Score=355.93  Aligned_cols=248  Identities=19%  Similarity=0.301  Sum_probs=170.7

Q ss_pred             ceeceeCceEEEEEEEc--cCCcEEEEEEeccCCC--CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeee
Q psy16343         54 EILGKGAYASVQTCVNI--LTELEYAVKIIDKLPG--HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAH  129 (539)
Q Consensus        54 ~~LG~G~fG~V~~~~~~--~t~~~vAvK~i~k~~~--~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiH  129 (539)
                      +.||+|+||.||+|...  .+++.||||+++....  ...+++.+|+++|.++ +|||||+++++++++.. +   .|  
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~~~~-~---lv--   85 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICEAESW-M---LV--   85 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESSSE-E---EE--
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-CCCCCceEEEEeccCCE-E---EE--
Confidence            47999999999999864  3557899999964322  2245789999999997 59999999999865421 1   11  


Q ss_pred             ecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhh
Q psy16343        130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL  209 (539)
Q Consensus       130 rDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~  209 (539)
                                           .+|.-+ +              .+...+.....+..+.+                    
T Consensus        86 ---------------------mE~~~~-g--------------~L~~~l~~~~~l~~~~~--------------------  109 (277)
T d1xbba_          86 ---------------------MEMAEL-G--------------PLNKYLQQNRHVKDKNI--------------------  109 (277)
T ss_dssp             ---------------------EECCTT-E--------------EHHHHHHHCTTCCHHHH--------------------
T ss_pred             ---------------------EEcCCC-C--------------cHHHHHhhccCCCHHHH--------------------
Confidence                                 111100 0              00000000000000000                    


Q ss_pred             hHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccC
Q psy16343        210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN  289 (539)
Q Consensus       210 Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~  289 (539)
                                           ..|..|   ++.++.|+|  ++|||||||||+|||++.   .+.+||+|||+|+.+...
T Consensus       110 ---------------------~~i~~q---i~~gl~ylH--~~~iiHrDlKp~Nill~~---~~~~kl~DFGla~~~~~~  160 (277)
T d1xbba_         110 ---------------------IELVHQ---VSMGMKYLE--ESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRAD  160 (277)
T ss_dssp             ---------------------HHHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEEE---TTEEEECCCTTCEECCTT
T ss_pred             ---------------------HHHHHH---HHHHHhhHH--hCCcccCCCcchhhcccc---cCcccccchhhhhhcccc
Confidence                                 013444   777888888  999999999999999954   456899999999865332


Q ss_pred             CCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchh
Q psy16343        290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       290 ~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      ....     ......+||+.|||||++..      ..|+.++||||+||++|+|++ |.+||.+.+              
T Consensus       161 ~~~~-----~~~~~~~gt~~y~APE~l~~------~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~--------------  215 (277)
T d1xbba_         161 ENYY-----KAQTHGKWPVKWYAPECINY------YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--------------  215 (277)
T ss_dssp             CSEE-----EC----CCCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--------------
T ss_pred             cccc-----ccccccCCCceecCchhhcC------CCCCchhhhccchhhhhHHhhCCCCCCCCCC--------------
Confidence            2110     11234579999999999974      468999999999999999997 899998753              


Q ss_pred             hHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHH---hcCCCc
Q psy16343        369 CQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV---LKHPWI  423 (539)
Q Consensus       369 ~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~---l~Hpw~  423 (539)
                       ...+...|..+. +.+|    ..+++++++||.+||..||++|||++++   |+|+|+
T Consensus       216 -~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         216 -GSEVTAMLEKGERMGCP----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             -HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHcCCCCCCC----cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence             234566676654 3343    4689999999999999999999999988   567665

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=350.18  Aligned_cols=253  Identities=18%  Similarity=0.267  Sum_probs=176.1

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ .+.||+|+||.||+|... ++..||||++++. ....+.+.+|+++|.++ +|||||++++++.++.. +    
T Consensus        13 ~~~~~-~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~-~----   83 (272)
T d1qpca_          13 ETLKL-VERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAFLAEANLMKQL-QHQRLVRLYAVVTQEPI-Y----   83 (272)
T ss_dssp             GGEEE-EEEEEEETTEEEEEEEET-TTEEEEEEEECTT-SSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSC-E----
T ss_pred             HHeEE-eEEEecCCCcEEEEEEEC-CCCEEEEEEEccC-cCCHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCe-E----
Confidence            34554 467999999999999864 6788999999753 33467899999999998 59999999998765321 1    


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      +                      |.+|.-+ +              .+...+..        ...      ...      
T Consensus        84 i----------------------v~Ey~~~-g--------------~L~~~~~~--------~~~------~~l------  106 (272)
T d1qpca_          84 I----------------------ITEYMEN-G--------------SLVDFLKT--------PSG------IKL------  106 (272)
T ss_dssp             E----------------------EEECCTT-C--------------BHHHHTTS--------HHH------HTC------
T ss_pred             E----------------------EEEeCCC-C--------------cHHHHHhh--------cCC------CCC------
Confidence            1                      1111100 0              00000000        000      000      


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                       +...++                  .+..|   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+|+..
T Consensus       107 -~~~~~~------------------~i~~q---i~~gl~~lH--~~~ivHrDiKp~NIll~---~~~~~Kl~DFGla~~~  159 (272)
T d1qpca_         107 -TINKLL------------------DMAAQ---IAEGMAFIE--ERNYIHRDLRAANILVS---DTLSCKIADFGLARLI  159 (272)
T ss_dssp             -CHHHHH------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---TTSCEEECCCTTCEEC
T ss_pred             -CHHHHH------------------HHHHH---HHHHHHHHH--hCCcccCccchhheeee---cccceeeccccceEEc
Confidence             000000                  03334   677788888  99999999999999994   4567999999999865


Q ss_pred             ccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC-CCCCCCCCCCCCCcccCcc
Q psy16343        287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       287 ~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G-~~PF~~~~~~~~~~~~~~~  365 (539)
                      ......       ......||+.|||||++..      ..|+.++||||+||++|+|++| .+||.+.+           
T Consensus       160 ~~~~~~-------~~~~~~gt~~y~APE~~~~------~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~-----------  215 (272)
T d1qpca_         160 EDNEYT-------AREGAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----------  215 (272)
T ss_dssp             SSSCEE-------CCTTCCCCTTTSCHHHHHH------CEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----------
T ss_pred             cCCccc-------cccccCCcccccChHHHhC------CCCCchhhhhhhHHHHHHHHhCCCCCCCCCC-----------
Confidence            432211       1235679999999999973      4689999999999999999995 45554432           


Q ss_pred             chhhHHHHHHHHhcCCC-CCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc--CCCcc
Q psy16343        366 CHACQEILFHSIQQGHY-DFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK--HPWIS  424 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~-~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~--Hpw~~  424 (539)
                          ...+...+..+.. ..|    ..+++++++||.+||..||++|||++|+++  |+||+
T Consensus       216 ----~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         216 ----NPEVIQNLERGYRMVRP----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             ----HHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHhcCCCCCc----ccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                2345666666532 222    468999999999999999999999999998  88885

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-43  Score=342.07  Aligned_cols=249  Identities=17%  Similarity=0.222  Sum_probs=178.4

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      .|++ .+.||+|+||+||+|+. .++..||||++++.. .....+.+|++++.++ +|||||++++++.+....+   . 
T Consensus         5 ~~~~-~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~---i-   76 (258)
T d1k2pa_           5 DLTF-LKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIF---I-   76 (258)
T ss_dssp             CCCC-CCCCCEETTEEEEEEEE-TTTEEEEEEEEESSS-SCHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEE---E-
T ss_pred             HCEE-eEEEecCCCeEEEEEEE-CCCCEEEEEEECcCc-CCHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceE---E-
Confidence            3444 56799999999999997 478889999997643 3467899999999997 5999999999987654322   1 


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                            +.+|.-+ +              .+...+..    .           ....    +..
T Consensus        77 ----------------------v~Ey~~~-g--------------~l~~~~~~----~-----------~~~~----~~~  100 (258)
T d1k2pa_          77 ----------------------ITEYMAN-G--------------CLLNYLRE----M-----------RHRF----QTQ  100 (258)
T ss_dssp             ----------------------EEECCTT-E--------------EHHHHHHS----G-----------GGCC----CHH
T ss_pred             ----------------------EEEccCC-C--------------cHHHhhhc----c-----------ccCC----cHH
Confidence                                  1222100 0              00000000    0           0000    000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      ..--                     +..|   ++.|+.|+|  ++||+||||||+|||++   ..+.+||+|||+++.+.
T Consensus       101 ~~~~---------------------i~~q---i~~gl~~LH--~~~iiH~dlk~~Nill~---~~~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_         101 QLLE---------------------MCKD---VCEAMEYLE--SKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVL  151 (258)
T ss_dssp             HHHH---------------------HHHH---HHHHHHHHH--HTTBCCSCCSGGGEEEC---TTCCEEECCCSSCCBCS
T ss_pred             HHHH---------------------HHHH---HHHHHHHHh--hcCcccccccceeEEEc---CCCcEEECcchhheecc
Confidence            0000                     2334   677888888  99999999999999994   45679999999997554


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....       .....+||+.|+|||++..      ..|+.++||||+||++|+|++ |+.||.+.+            
T Consensus       152 ~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~------------  206 (258)
T d1k2pa_         152 DDEYT-------SSVGSKFPVRWSPPEVLMY------SKFSSKSDIWAFGVLMWEIYSLGKMPYERFT------------  206 (258)
T ss_dssp             SSSCC-------CCCCSCCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC------------
T ss_pred             CCCce-------eecccCCCCCcCCcHHhcC------CCCCcceeecccchhhHhHHhcCCCCCCCCC------------
Confidence            32211       1235689999999999974      469999999999999999998 899998754            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...+...|..+....+   +...++++++||++||+.||++|||++++++|
T Consensus       207 ---~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         207 ---NSETAEHIAQGLRLYR---PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             ---HHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ---HHHHHHHHHhCCCCCC---cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence               3446677777643222   24688999999999999999999999999987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-43  Score=345.33  Aligned_cols=247  Identities=18%  Similarity=0.270  Sum_probs=165.3

Q ss_pred             hcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        49 y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      |++ .+.||+|+||.||+|... ++..||||++++. ....+++.+|++++.++ +|||||++++++.+....+   .  
T Consensus         7 ~~~-~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~---l--   77 (263)
T d1sm2a_           7 LTF-VQEIGSGQFGLVHLGYWL-NKDKVAIKTIREG-AMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPIC---L--   77 (263)
T ss_dssp             EEE-EEEEECCSSCCEEEEEET-TTEEEEEEECCSS-SSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE---E--
T ss_pred             cEE-EEEEeeCCCeEEEEEEEC-CCCEEEEEEECCC-cCcHHHHHHHHHHHHhc-CCCCcccccceeccCCceE---E--
Confidence            444 467999999999999875 5678999999753 34467899999999997 5999999999987654332   1  


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCC-CcccccccccccCCCCCCCCcccchh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA-EFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~-~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                           +.+|.-+ +              .+...+... ....++..                  
T Consensus        78 ---------------------v~E~~~~-g--------------~L~~~l~~~~~~~~~~~~------------------  103 (263)
T d1sm2a_          78 ---------------------VFEFMEH-G--------------CLSDYLRTQRGLFAAETL------------------  103 (263)
T ss_dssp             ---------------------EEECCTT-C--------------BHHHHHHTTTTCCCHHHH------------------
T ss_pred             ---------------------EEEecCC-C--------------cHHHHhhccccCCCHHHH------------------
Confidence                                 1111100 0              000000000 00000000                  


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                                             ..+..|   ++.|+.|+|  ++||+||||||+|||++   ..+.+||+|||+++...
T Consensus       104 -----------------------~~i~~q---ia~gl~~lH--~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~  152 (263)
T d1sm2a_         104 -----------------------LGMCLD---VCEGMAYLE--EACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL  152 (263)
T ss_dssp             -----------------------HHHHHH---HHHHHHHHH--HTTCCCTTCSGGGEEEC---GGGCEEECSCC------
T ss_pred             -----------------------HHHHHH---HHHHHHhhh--ccceeecccchhheeec---CCCCeEecccchheecc
Confidence                                   003344   677888888  99999999999999994   45679999999997653


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccc
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETC  366 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~  366 (539)
                      .....       .....+||+.|||||++..      ..|+.++||||+||++|+|++ |.+||.+.+            
T Consensus       153 ~~~~~-------~~~~~~gt~~y~aPE~l~~------~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~------------  207 (263)
T d1sm2a_         153 DDQYT-------SSTGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------------  207 (263)
T ss_dssp             -------------------CTTSCCHHHHTT------CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC------------
T ss_pred             CCCce-------eecceecCcccCChHHhcC------CCCCchhhhcchHHHHHHHHHCCCCCCCCCC------------
Confidence            32211       1234689999999999963      569999999999999999999 566665432            


Q ss_pred             hhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       367 ~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                         ...+...|..+.....+   ...++++.+||.+||..||++|||++|+++|
T Consensus       208 ---~~~~~~~i~~~~~~~~p---~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         208 ---NSEVVEDISTGFRLYKP---RLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             ---HHHHHHHHHHTCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---HHHHHHHHHhcCCCCCc---cccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence               23456667665332221   3579999999999999999999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-43  Score=348.59  Aligned_cols=248  Identities=21%  Similarity=0.342  Sum_probs=174.2

Q ss_pred             eeceeCceEEEEEEEcc--CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCeeeec
Q psy16343         55 ILGKGAYASVQTCVNIL--TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRD  131 (539)
Q Consensus        55 ~LG~G~fG~V~~~~~~~--t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~IiHrD  131 (539)
                      .||+|+||+||+|..+.  ++..||||++++... ...+++.+|+++|.++ +|||||+++++++++.. +   .     
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~~-~---l-----   85 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEAL-M---L-----   85 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEESSSE-E---E-----
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCeE-E---E-----
Confidence            49999999999998754  455799999975432 2346788999999997 59999999998865421 1   1     


Q ss_pred             CCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       132 LK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                                        |.+|.-+ +              .+...+ .....++..                    -.-
T Consensus        86 ------------------vmE~~~~-g--------------~L~~~l~~~~~~l~~~--------------------~~~  112 (285)
T d1u59a_          86 ------------------VMEMAGG-G--------------PLHKFLVGKREEIPVS--------------------NVA  112 (285)
T ss_dssp             ------------------EEECCTT-E--------------EHHHHHTTCTTTSCHH--------------------HHH
T ss_pred             ------------------EEEeCCC-C--------------cHHHHhhccccCCCHH--------------------HHH
Confidence                              1122100 0              000000 000000000                    000


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccccCC
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT  290 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~~~  290 (539)
                      -                     +..|   ++.++.|+|  ++||+||||||+|||++.   .+.+||+|||+|+.+....
T Consensus       113 ~---------------------i~~q---i~~gL~ylH--~~~iiHrDlKp~Nill~~---~~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_         113 E---------------------LLHQ---VSMGMKYLE--EKNFVHRDLAARNVLLVN---RHYAKISDFGLSKALGADD  163 (285)
T ss_dssp             H---------------------HHHH---HHHHHHHHH--HTTEECCCCSGGGEEEEE---TTEEEECCCTTCEECTTCS
T ss_pred             H---------------------HHHH---HHHHHHHHH--hCCeecCcCchhheeecc---CCceeeccchhhhcccccc
Confidence            0                     3344   777888888  999999999999999954   4569999999998654322


Q ss_pred             CCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccCccchhh
Q psy16343        291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRGETCHAC  369 (539)
Q Consensus       291 ~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~~~~~~~  369 (539)
                      ...     ....+.+||+.|||||++..      ..|+.++||||+||++|+|++ |.+||.+.+.              
T Consensus       164 ~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~--------------  218 (285)
T d1u59a_         164 SYY-----TARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------------  218 (285)
T ss_dssp             CEE-----CCCCSSCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--------------
T ss_pred             ccc-----ccccccccCccccChHHHhC------CCCCccchhhcchHHHHHHHhCCCCCCCCCCH--------------
Confidence            111     12235689999999999973      468999999999999999998 9999987532              


Q ss_pred             HHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHH---hcCCCcc
Q psy16343        370 QEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV---LKHPWIS  424 (539)
Q Consensus       370 ~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~---l~Hpw~~  424 (539)
                       ..+...|..+. +.+|    ..+++++.+||.+||..||++|||+.++   |+|+|+.
T Consensus       219 -~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         219 -PEVMAFIEQGKRMECP----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             -HHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence             23566777664 3344    4689999999999999999999998877   6788874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-43  Score=353.57  Aligned_cols=249  Identities=20%  Similarity=0.264  Sum_probs=170.3

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCc----EEEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTEL----EYAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~----~vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      .|++ .++||+|+||+||+|.+..+|+    .||||.++.. .....+++.+|++++.++ +|||||++++++.++..+.
T Consensus        10 dy~~-~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~   87 (317)
T d1xkka_          10 EFKK-IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTSTVQL   87 (317)
T ss_dssp             TEEE-EEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESSSEEE
T ss_pred             HCEE-eeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeeE
Confidence            3665 4789999999999999988876    5888887543 234467899999999997 5999999999987653221


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCC-CCCCcccccccccccCCCCCCCC
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV-GSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~-gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                          +                       ..+..+ +              .+...+ .....++.+.+            
T Consensus        88 ----v-----------------------~e~~~~-~--------------~l~~~~~~~~~~~~~~~~------------  113 (317)
T d1xkka_          88 ----I-----------------------TQLMPF-G--------------CLLDYVREHKDNIGSQYL------------  113 (317)
T ss_dssp             ----E-----------------------EECCTT-C--------------BHHHHHHHTSSSCCHHHH------------
T ss_pred             ----E-----------------------EEeccC-C--------------cccccccccccCCCHHHH------------
Confidence                1                       001000 0              000000 00000000000            


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                                                   ..|..|   ++.|+.|+|  ++|||||||||+|||++.   .+.+||+|||
T Consensus       114 -----------------------------~~i~~q---i~~gl~yLH--~~~iiHrDlKp~NIll~~---~~~~kl~DFG  156 (317)
T d1xkka_         114 -----------------------------LNWCVQ---IAKGMNYLE--DRRLVHRDLAARNVLVKT---PQHVKITDFG  156 (317)
T ss_dssp             -----------------------------HHHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEEE---TTEEEECCCS
T ss_pred             -----------------------------HHHHHH---HHHHHHHHH--HcCcccCcchhhcceeCC---CCCeEeeccc
Confidence                                         013344   777888888  899999999999999954   4569999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +|+........      .......||+.|||||++..      ..|+.++||||+||++|+|++ |.+||.+.+.     
T Consensus       157 la~~~~~~~~~------~~~~~~~gt~~y~APE~l~~------~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~-----  219 (317)
T d1xkka_         157 LAKLLGAEEKE------YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----  219 (317)
T ss_dssp             HHHHTTTTCC--------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG-----
T ss_pred             cceeccccccc------ccccccccCccccChHHHhc------CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH-----
Confidence            99865432211      11234579999999999974      469999999999999999998 8999977542     


Q ss_pred             ccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        361 QRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                ..+...+..+. +..|    ..+++++++||.+||..||.+|||+.|+++|
T Consensus       220 ----------~~~~~~i~~~~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         220 ----------SEISSILEKGERLPQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             ----------GGHHHHHHHTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------HHHHHHHHcCCCCCCC----cccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                      22455666554 3333    4689999999999999999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-43  Score=346.52  Aligned_cols=251  Identities=21%  Similarity=0.298  Sum_probs=165.4

Q ss_pred             chhcccCceeceeCceEEEEEEEccCC---cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTE---LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHE  122 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~---~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~  122 (539)
                      +.|++ ++.||+|+||.||+|++..++   ..||||+++.... .....+.+|+++|+++ +|||||++++++.++.. +
T Consensus         7 ~~~~l-~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~-~   83 (273)
T d1mp8a_           7 ERIEL-GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVITENPV-W   83 (273)
T ss_dssp             GGEEE-EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSC-E
T ss_pred             HHeEE-EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCeE-E
Confidence            56776 578999999999999987543   5689999865332 2345688999999997 69999999999864321 1


Q ss_pred             ccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCc
Q psy16343        123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       123 ~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (539)
                          +                      +.+|.-+ +              .+.......               ....+.
T Consensus        84 ----i----------------------v~E~~~~-g--------------~l~~~~~~~---------------~~~l~~  107 (273)
T d1mp8a_          84 ----I----------------------IMELCTL-G--------------ELRSFLQVR---------------KYSLDL  107 (273)
T ss_dssp             ----E----------------------EEECCTT-E--------------EHHHHHHHT---------------TTTSCH
T ss_pred             ----E----------------------EEEeccC-C--------------cHHhhhhcc---------------CCCCCH
Confidence                1                      1111100 0              000000000               000000


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                       .+++                        .+..|   ++.++.|+|  ++||+||||||+|||+..   .+.+||+|||+
T Consensus       108 -~~~~------------------------~~~~q---i~~gl~ylH--~~~iiHrDlKp~NIll~~---~~~~Kl~DfG~  154 (273)
T d1mp8a_         108 -ASLI------------------------LYAYQ---LSTALAYLE--SKRFVHRDIAARNVLVSS---NDCVKLGDFGL  154 (273)
T ss_dssp             -HHHH------------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEEE---TTEEEECC---
T ss_pred             -HHHH------------------------HHHHH---HHHHhhhhc--ccCeeccccchhheeecC---CCcEEEccchh
Confidence             0000                        03344   677788888  999999999999999954   35699999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~  361 (539)
                      |+........       .....+||+.|+|||++..      ..|+.++||||+||++|+|++ |.+||.+.+..     
T Consensus       155 a~~~~~~~~~-------~~~~~~gt~~y~apE~l~~------~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~-----  216 (273)
T d1mp8a_         155 SRYMEDSTYY-------KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----  216 (273)
T ss_dssp             -----------------------CCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----
T ss_pred             heeccCCcce-------eccceecCcccchhhHhcc------CCCCCccccccchHHHHHHHhcCCCCCCCCCHH-----
Confidence            9865432211       1235678999999999974      479999999999999999998 89999876432     


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                .+...|..+...   +.++.+|+++++||.+||..||++|||++|+++|
T Consensus       217 ----------~~~~~i~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         217 ----------DVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             ----------GHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                      255666666421   1235789999999999999999999999999876

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-42  Score=347.79  Aligned_cols=255  Identities=21%  Similarity=0.290  Sum_probs=164.1

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCc---EEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTEL---EYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHER  123 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~---~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~  123 (539)
                      .|++ +++||+|+||.||+|.++.+++   .||||.+..... ...+++.+|+++|.++ +|||||++++++.+....+ 
T Consensus        27 ~~~~-~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~-  103 (299)
T d1jpaa_          27 CVKI-EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVM-  103 (299)
T ss_dssp             GEEE-EEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCE-
T ss_pred             hcEE-eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEE-
Confidence            3554 5789999999999999987764   589998864322 2345788999999997 5999999999997654432 


Q ss_pred             cCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcc
Q psy16343        124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR  203 (539)
Q Consensus       124 ~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (539)
                        .|                       .+|.-+ +              .+...+..               .....+. 
T Consensus       104 --iv-----------------------~Ey~~~-g--------------~L~~~~~~---------------~~~~l~~-  127 (299)
T d1jpaa_         104 --II-----------------------TEFMEN-G--------------SLDSFLRQ---------------NDGQFTV-  127 (299)
T ss_dssp             --EE-----------------------EECCTT-E--------------EHHHHHHT---------------TTTCSCH-
T ss_pred             --EE-----------------------EEecCC-C--------------cceeeecc---------------ccCCCCH-
Confidence              11                       111101 0              00000000               0000000 


Q ss_pred             cchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCc
Q psy16343        204 CDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLG  283 (539)
Q Consensus       204 ~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla  283 (539)
                      .++                        ..|.+|   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+|
T Consensus       128 ~~~------------------------~~i~~q---ia~gl~yLH--~~~iiHrDlKp~NILl~---~~~~~Kl~DFGla  175 (299)
T d1jpaa_         128 IQL------------------------VGMLRG---IAAGMKYLA--DMNYVHRDLAARNILVN---SNLVCKVSDFGLS  175 (299)
T ss_dssp             HHH------------------------HHHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEECCC---
T ss_pred             HHH------------------------HHHHHH---HHHHHHHHh--hCCCccCccccceEEEC---CCCcEEECCcccc
Confidence            000                        003344   778888888  89999999999999994   4567999999999


Q ss_pred             cccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCccc
Q psy16343        284 SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR  362 (539)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~  362 (539)
                      +.+........   .......+||+.|||||++..      ..|+.++||||+||++|+|++ |.+||.+.+        
T Consensus       176 ~~~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~--------  238 (299)
T d1jpaa_         176 RFLEDDTSDPT---YTSALGGKIPIRWTAPEAIQY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMT--------  238 (299)
T ss_dssp             -----------------------CGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------
T ss_pred             eEccCCCCcce---eeecccccCCccccCHHHHhc------CCCCcccccccchHHHHHHHhCCCCCCCCCC--------
Confidence            86543221110   011223568999999999863      469999999999999999997 899998753        


Q ss_pred             CccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       363 ~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ...+...|..+. ..|.  +..+++++++||.+||..||++|||++|++++
T Consensus       239 -------~~~~~~~i~~~~-~~~~--~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         239 -------NQDVINAIEQDY-RLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             -------HHHHHHHHHTTC-CCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             -------HHHHHHHHHcCC-CCCC--CccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                   234556666553 2222  24689999999999999999999999998764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-42  Score=341.47  Aligned_cols=254  Identities=19%  Similarity=0.261  Sum_probs=173.0

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      +.|++ ++.||+|+||.||+|++..+ ..||||+++.. ....+.+.+|+.++.++ +|||||++++++.++.. +   .
T Consensus        17 ~~~~i-~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~-~---l   88 (285)
T d1fmka3          17 ESLRL-EVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPG-TMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSEEPI-Y---I   88 (285)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEETTT-EEEEEEECCTT-SSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSC-E---E
T ss_pred             HHEEE-eeEEeeCCCeEEEEEEECCC-CEEEEEEECcc-cCCHHHHHHHHHHHHhc-ccCCEeEEEEEEecCCe-E---E
Confidence            34665 67899999999999998655 56999999653 33467899999999997 59999999999865421 1   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCC--CCCcccccccccccCCCCCCCCccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG--SAEFMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~g--t~~y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      |      +|.+-                 + +              .+.....  ....+..+                 
T Consensus        89 v------~Ey~~-----------------~-g--------------~l~~~~~~~~~~~l~~~-----------------  113 (285)
T d1fmka3          89 V------TEYMS-----------------K-G--------------SLLDFLKGETGKYLRLP-----------------  113 (285)
T ss_dssp             E------ECCCT-----------------T-C--------------BHHHHHSHHHHTTCCHH-----------------
T ss_pred             E------EEecC-----------------C-C--------------chhhhhhhcccccchHH-----------------
Confidence            1      22111                 0 0              0000000  00000000                 


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                            .++.                  +..+   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+|+
T Consensus       114 ------~~~~------------------i~~~---i~~gl~~LH--~~~ivH~DlKp~NIll~---~~~~~kl~DfGla~  161 (285)
T d1fmka3         114 ------QLVD------------------MAAQ---IASGMAYVE--RMNYVHRDLRAANILVG---ENLVCKVADFGLAR  161 (285)
T ss_dssp             ------HHHH------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC
T ss_pred             ------HHHH------------------HHHH---HHHHHHHHh--hhheecccccceEEEEC---CCCcEEEcccchhh
Confidence                  0000                  3334   677788888  99999999999999994   44679999999997


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC-CCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY-PPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~-~PF~~~~~~~~~~~~~  363 (539)
                      .......       ......+||+.|+|||++..      ..|+.++||||+||++|+|++|. +||.+..         
T Consensus       162 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~------~~~~~ksDI~S~Giil~el~t~~~p~~~~~~---------  219 (285)
T d1fmka3         162 LIEDNEY-------TARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMV---------  219 (285)
T ss_dssp             ---------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC---------
T ss_pred             hccCCCc-------eeeccccccccccChHHHhC------CCCCcHHhhhcchHHHHHHHhCCCCCCCCCC---------
Confidence            5532221       11234689999999999974      46899999999999999999965 4454432         


Q ss_pred             ccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc--CCCccCCC
Q psy16343        364 ETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK--HPWISTAG  427 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~--Hpw~~~~~  427 (539)
                            ...++..+..+. +..+    ..+++++++||.+||+.||++||+++++++  |+||+...
T Consensus       220 ------~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         220 ------NREVLDQVERGYRMPCP----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             ------HHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             ------HHHHHHHHHhcCCCCCC----cccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence                  234556666553 2233    468999999999999999999999999988  99997653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-42  Score=342.79  Aligned_cols=269  Identities=22%  Similarity=0.295  Sum_probs=168.0

Q ss_pred             chhcccCceeceeCceEEEEEEEcc-----CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~-----t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ ++.||+|+||.||+|....     +++.||||++++... .....+.+|+.++.++.+|+|||.++.++.....
T Consensus        13 ~~y~~-~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          13 DRLKL-GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGEEE-EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHEEE-eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            45666 5789999999999999754     446899999965332 2345677889999888889999999988755432


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEecccc-ccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~-~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      ..   -++     +|.              ++.|-- ..+.....             ...+....++...         
T Consensus        92 ~~---~iv-----~E~--------------~~~g~L~~~l~~~~~-------------~~~~~~~~~~~~~---------  127 (299)
T d1ywna1          92 PL---MVI-----VEF--------------CKFGNLSTYLRSKRN-------------EFVPYKVAPEDLY---------  127 (299)
T ss_dssp             CC---EEE-----EEC--------------CTTCBHHHHHHHTGG-------------GBCC------------------
T ss_pred             eE---EEE-----EEe--------------cCCCcHHHHHHhccc-------------cccccccchhhhh---------
Confidence            11   010     111              010000 00000000             0000000111000         


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                          ....+...++                  .+..|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|
T Consensus       128 ----~~~l~~~~~~------------------~~~~q---i~~gl~ylH--~~~ivHrDlKp~NILl~---~~~~~Kl~D  177 (299)
T d1ywna1         128 ----KDFLTLEHLI------------------CYSFQ---VAKGMEFLA--SRKCIHRDLAARNILLS---EKNVVKICD  177 (299)
T ss_dssp             ------CBCHHHHH------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---GGGCEEECC
T ss_pred             ----cccCCHHHHH------------------HHHHH---HHHHHHHHH--hCCCcCCcCCccceeEC---CCCcEEEcc
Confidence                0000000111                  03344   677888888  99999999999999994   446799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC-CCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G-~~PF~~~~~~~~  358 (539)
                      ||+|+........      ....+.+||+.|||||++..      ..|+.++||||+||++|+|++| .+||.+....  
T Consensus       178 FGla~~~~~~~~~------~~~~~~~gt~~y~APE~l~~------~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~--  243 (299)
T d1ywna1         178 FGLARDIYKDPDY------VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--  243 (299)
T ss_dssp             ------CCSCTTS------CCTTSCCCGGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS--
T ss_pred             Ccchhhccccccc------cccCceeeCccccchhHhhc------CCCCcccceeehHHHHHHHHhCCCCCCCCCCHH--
Confidence            9999754322211      12346789999999999974      4699999999999999999986 5788765321  


Q ss_pred             CcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        359 GWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                                  +.+...+..+. +.+|    ..+++++++||.+||..||++|||++|+++|
T Consensus       244 ------------~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         244 ------------EEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             ------------HHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------HHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                        23444555543 3333    4689999999999999999999999999987

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-41  Score=336.87  Aligned_cols=249  Identities=19%  Similarity=0.252  Sum_probs=161.5

Q ss_pred             CceeceeCceEEEEEEEccCC----cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCe
Q psy16343         53 GEILGKGAYASVQTCVNILTE----LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI  127 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~----~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~I  127 (539)
                      +++||+|+||.||+|....++    ..||||+++.... ....++.+|+++|.++ +|||||++++++.+....+   .|
T Consensus        12 ~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~~~~~~---~v   87 (283)
T d1mqba_          12 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMM---II   87 (283)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEE---EE
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEecCCceE---EE
Confidence            578999999999999987655    4699999964322 2345688999999997 5999999999987654332   11


Q ss_pred             eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchh
Q psy16343        128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLW  207 (539)
Q Consensus       128 iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (539)
                                             .+|.-+ +              .+...           ...    ....    .+..
T Consensus        88 -----------------------~e~~~~-~--------------~l~~~-----------~~~----~~~~----~~~~  110 (283)
T d1mqba_          88 -----------------------TEYMEN-G--------------ALDKF-----------LRE----KDGE----FSVL  110 (283)
T ss_dssp             -----------------------EECCTT-E--------------EHHHH-----------HHH----TTTC----SCHH
T ss_pred             -----------------------EEeccc-C--------------cchhh-----------hhc----cccc----ccHH
Confidence                                   111100 0              00000           000    0000    0000


Q ss_pred             hhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccccc
Q psy16343        208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  287 (539)
Q Consensus       208 s~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~  287 (539)
                      .   ++                  .+..+   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+|+...
T Consensus       111 ~---~~------------------~i~~~---i~~gl~~lH--~~~iiHrDlKp~NILl~---~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_         111 Q---LV------------------GMLRG---IAAGMKYLA--NMNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             H---HH------------------HHHHH---HHHHHHHHH--HTTCCCSCCCGGGEEEC---TTCCEEECCCCC-----
T ss_pred             H---HH------------------HHHHH---HHHhhhhcc--ccccccCccccceEEEC---CCCeEEEcccchhhccc
Confidence            0   00                  03333   667777888  99999999999999994   45679999999998653


Q ss_pred             cCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccch
Q psy16343        288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH  367 (539)
Q Consensus       288 ~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~  367 (539)
                      .....     .......+||+.|||||++..      ..|+.++||||+||++|+|++|..||....             
T Consensus       162 ~~~~~-----~~~~~~~~gt~~Y~APE~l~~------~~~~~~sDI~S~Gvil~el~t~~~~~~~~~-------------  217 (283)
T d1mqba_         162 DDPEA-----TYTTSGGKIPIRWTAPEAISY------RKFTSASDVWSFGIVMWEVMTYGERPYWEL-------------  217 (283)
T ss_dssp             -----------------CCCGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-------------
T ss_pred             CCCcc-----ceEeccCCCCccccCHHHHcc------CCCCCcccccccHHHHHHHHhCCCCccccC-------------
Confidence            32110     011234578999999999973      479999999999999999999655544321             


Q ss_pred             hhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       368 ~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                       ....++..+..+. ..+.  ...+++++++||.+||..||++|||+.|+++
T Consensus       218 -~~~~~~~~i~~~~-~~~~--~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         218 -SNHEVMKAINDGF-RLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             -CHHHHHHHHHTTC-CCCC--CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -CHHHHHHHHhccC-CCCC--chhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence             1234566666553 2222  2468999999999999999999999999976

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-41  Score=336.44  Aligned_cols=267  Identities=22%  Similarity=0.267  Sum_probs=173.4

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCC-------cEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeecc
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTE-------LEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYED  117 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~-------~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~  117 (539)
                      .+.|++ ++.||+|+||.||+|+...++       ..||||++++... .....+.+|+..+.++.+|||||++++++.+
T Consensus        12 ~~~~~l-~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          12 RDRLVL-GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             GGGEEE-EEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHHeEE-eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            356666 578999999999999876654       4799999965332 2346788899999998789999999999987


Q ss_pred             cccccccCCeeeecCCCCCeeccCCCCCCCeEEEecccc-ccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCC
Q psy16343        118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE  196 (539)
Q Consensus       118 ~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~-~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~  196 (539)
                      +...+   .|      +|.+-              -|.- ..+......            .....+.+   ..   . .
T Consensus        91 ~~~~~---~v------~e~~~--------------~g~l~~~i~~~~~~------------~~~~~~~~---~~---~-~  128 (299)
T d1fgka_          91 DGPLY---VI------VEYAS--------------KGNLREYLQARRPP------------GLEYSYNP---SH---N-P  128 (299)
T ss_dssp             SSSCE---EE------ECCCT--------------TCBHHHHHHTTSCC-------------------------------
T ss_pred             CCeEE---EE------EEccC--------------CCcHHHHHHhhcCC------------cccccccc---cc---C-c
Confidence            64332   11      11110              0000 000000000            00000000   00   0 0


Q ss_pred             CCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCce
Q psy16343        197 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVK  276 (539)
Q Consensus       197 ~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ik  276 (539)
                      ...+    +.   -.+                  ..|..|   ++.|+.|+|  ++|||||||||+|||+.   ..+.+|
T Consensus       129 ~~~l----~~---~~~------------------~~~~~q---i~~al~ylH--~~~ivHrDiKp~NiLl~---~~~~~k  175 (299)
T d1fgka_         129 EEQL----SS---KDL------------------VSCAYQ---VARGMEYLA--SKKCIHRDLAARNVLVT---EDNVMK  175 (299)
T ss_dssp             CCCC----CH---HHH------------------HHHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTCCEE
T ss_pred             cccC----CH---HHH------------------HHHHHH---HHHHHHHhh--hCCEEeeeecccceeec---CCCCeE
Confidence            0000    00   000                  013444   677888888  99999999999999994   445699


Q ss_pred             eccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCC
Q psy16343        277 LCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCG  355 (539)
Q Consensus       277 l~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~  355 (539)
                      |+|||+++........      ......+||+.|+|||++..      ..|+.++||||+||++|+|++ |.+||.+.+ 
T Consensus       176 l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~l~~------~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~-  242 (299)
T d1fgka_         176 IADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-  242 (299)
T ss_dssp             ECSTTCCCCGGGCCTT------CCCTTSCCGGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred             eccchhhccccccccc------cccccCCCChhhhhhhHhcC------CCCCchhhhHHhHHHHHHhccCCCCCCCCCC-
Confidence            9999999865433221      12345689999999999974      579999999999999999998 789997653 


Q ss_pred             CCCCcccCccchhhHHHHHHHHhcCC-CCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        356 EDCGWQRGETCHACQEILFHSIQQGH-YDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                    ...++..+..+. +.+|    ..+++++++||.+||..||.+|||+.|+++
T Consensus       243 --------------~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         243 --------------VEELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             --------------HHHHHHHHHTTCCCCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------HHHHHHHHHcCCCCCCC----ccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                          234666676653 2333    468999999999999999999999999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.7e-41  Score=336.30  Aligned_cols=274  Identities=20%  Similarity=0.196  Sum_probs=174.8

Q ss_pred             chhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ .+.||+|+||+||+|+.+     .++..||||++++... ....++.+|+++|.++ +||||+++++++.+...
T Consensus        13 ~~~~~-~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          13 NNIEY-VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             GGCEE-EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSS
T ss_pred             HHcEE-eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-CCCCcccceeeeccCCc
Confidence            45665 468999999999999875     3567899999975332 2345789999999997 69999999999977654


Q ss_pred             ccccCCe-eeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRI-AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~I-iHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+..... -+++|.  .++..                     .......    .........       ...........
T Consensus        91 ~~~v~e~~~~g~L~--~~l~~---------------------~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~  136 (301)
T d1lufa_          91 MCLLFEYMAYGDLN--EFLRS---------------------MSPHTVC----SLSHSDLST-------RARVSSPGPPP  136 (301)
T ss_dssp             CEEEEECCTTCBHH--HHHHH---------------------TCC---------------------------------CC
T ss_pred             eEEEEEecCCCcHH--HHHHh---------------------cCccccc----cccccccch-------hhhccccCCCC
Confidence            3310000 000000  00000                     0000000    000000000       00000000000


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                             .+...++.                  +.+|   ++.++.|+|  ++|||||||||+|||++   ..+.+||+|
T Consensus       137 -------l~~~~~~~------------------i~~q---i~~gl~ylH--~~~ivHrDlKp~NILld---~~~~~Kl~D  183 (301)
T d1lufa_         137 -------LSCAEQLC------------------IARQ---VAAGMAYLS--ERKFVHRDLATRNCLVG---ENMVVKIAD  183 (301)
T ss_dssp             -------CCHHHHHH------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---GGGCEEECC
T ss_pred             -------CCHHHHHH------------------HHHH---HHHHhhhcc--cCCeEeeEEcccceEEC---CCCcEEEcc
Confidence                   00000110                  2334   667778888  99999999999999994   456799999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC-CCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY-PPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~-~PF~~~~~~~~  358 (539)
                      ||+|+........      ....+.+||+.|+|||++..      ..|+.++||||+||++|+|++|. +||.+.+    
T Consensus       184 FGls~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~----  247 (301)
T d1lufa_         184 FGLSRNIYSADYY------KADGNDAIPIRWMPPESIFY------NRYTTESDVWAYGVVLWEIFSYGLQPYYGMA----  247 (301)
T ss_dssp             CSCHHHHTGGGCB------C----CCBCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC----
T ss_pred             chhheeccCCccc------cccCCCCcCcCcCCHHHHcc------CCCChhhhhccchhhHHHHHccCCCCCCCCC----
Confidence            9998754332211      12346789999999999974      46999999999999999999985 7887653    


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                 ...+...+..+....   .+..+++++.+||.+||..||++|||+.||++
T Consensus       248 -----------~~e~~~~v~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         248 -----------HEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             -----------HHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------HHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                       234666777765321   12478999999999999999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-41  Score=340.81  Aligned_cols=271  Identities=17%  Similarity=0.186  Sum_probs=175.8

Q ss_pred             cchhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccC
Q psy16343         46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHK  125 (539)
Q Consensus        46 ~~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~  125 (539)
                      .+.|++ .+.||+|+||+||+|++..+|+.||||++.....  ..++.+|+++++.+.+|++|+.+..++.++...+   
T Consensus         6 g~rY~l-~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~---   79 (299)
T d1ckia_           6 GNRYRL-GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV---   79 (299)
T ss_dssp             TTTEEE-EEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE---
T ss_pred             CCEEEE-eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEE---
Confidence            356776 5789999999999999999999999999865432  2357889999999865555666665555443322   


Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .|                       .++. +..               +...           +.. .   ...+    +
T Consensus        80 iv-----------------------me~~-~~~---------------l~~~-----------~~~-~---~~~~----~  101 (299)
T d1ckia_          80 MV-----------------------MELL-GPS---------------LEDL-----------FNF-C---SRKF----S  101 (299)
T ss_dssp             EE-----------------------EECC-CCB---------------HHHH-----------HHH-T---TTCC----C
T ss_pred             EE-----------------------EEEc-CCc---------------hhhh-----------hhh-c---cCCC----c
Confidence            11                       1110 000               0000           000 0   0000    0


Q ss_pred             hhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCccc
Q psy16343        206 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  285 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~  285 (539)
                      ..   .++.                  +..|   ++.++.|+|  ++|||||||||+|||+...+....+||+|||+|+.
T Consensus       102 ~~---~~~~------------------~~~q---i~~~l~~lH--~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~  155 (299)
T d1ckia_         102 LK---TVLL------------------LADQ---MISRIEYIH--SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  155 (299)
T ss_dssp             HH---HHHH------------------HHHH---HHHHHHHHH--HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred             HH---HHHH------------------HHHH---HHHHHHHHH--HCCeeeccCCHhhccccccCCCceeeeeccCccee
Confidence            00   0000                  2233   667777777  99999999999999987655566799999999986


Q ss_pred             cccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCcc
Q psy16343        286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET  365 (539)
Q Consensus       286 ~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~  365 (539)
                      +....... ........+.+||+.|||||++.+      ..|+.++||||+||++|+|++|.+||.+....+...     
T Consensus       156 ~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~-----  223 (299)
T d1ckia_         156 YRDARTHQ-HIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-----  223 (299)
T ss_dssp             CBCTTTCC-BCCCCBCCSCCCCSSSCCHHHHTT------BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-----------
T ss_pred             cccccccc-ceeccccCCcCCCccccCHHHHhC------CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH-----
Confidence            54332211 111112346789999999999863      469999999999999999999999998754332110     


Q ss_pred             chhhHHHHHHHHhcCCCCCCC-CCCCCCCHHHHHHHHHhccccccCCCCHH---HHhcCCCccC
Q psy16343        366 CHACQEILFHSIQQGHYDFPE-GEWSTISDEAKDLIRRLLVKDARKRLSAA---SVLKHPWIST  425 (539)
Q Consensus       366 ~~~~~~~~~~~i~~~~~~~p~-~~~~~~s~~~~dli~~lL~~dP~~R~ta~---e~l~Hpw~~~  425 (539)
                             ....+.......|. ..+..+++++.+||.+||..||++||+++   ++|+|+|...
T Consensus       224 -------~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         224 -------KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             --------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             -------HHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence                   11111111111111 12346899999999999999999999986   5578887643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-41  Score=339.63  Aligned_cols=263  Identities=24%  Similarity=0.282  Sum_probs=172.5

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcE--EEEEEeccC-CCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELE--YAVKIIDKL-PGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERH  124 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~--vAvK~i~k~-~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~  124 (539)
                      .|++ +++||+|+||+||+|+++.+|..  ||||.+++. .....+.+.+|+++|.++.+|||||++++++.+....+  
T Consensus        11 ~~~~-~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~--   87 (309)
T d1fvra_          11 DIKF-QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY--   87 (309)
T ss_dssp             GCEE-EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE--
T ss_pred             HcEE-EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE--
Confidence            4554 57899999999999999988874  677877543 22345578999999999767999999999998765433  


Q ss_pred             CCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCc--ccccccccccCCCCCCCCc
Q psy16343        125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF--MAPEIVNAFMGPEASGYDK  202 (539)
Q Consensus       125 ~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y--~aPE~~~~~~~~~~~~~~~  202 (539)
                       .|      +|.+-                 + +              .+...+.....  ..+....  .......   
T Consensus        88 -iV------~ey~~-----------------~-g--------------~L~~~l~~~~~~~~~~~~~~--~~~~~~~---  123 (309)
T d1fvra_          88 -LA------IEYAP-----------------H-G--------------NLLDFLRKSRVLETDPAFAI--ANSTAST---  123 (309)
T ss_dssp             -EE------ECCCT-----------------T-C--------------BHHHHHHTTCHHHHCHHHHH--HTTBSCS---
T ss_pred             -EE------EEecC-----------------C-C--------------cHHHHHhhccccccchhhhc--cccccCC---
Confidence             11      11110                 0 0              00000000000  0000000  0000000   


Q ss_pred             ccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCC
Q psy16343        203 RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL  282 (539)
Q Consensus       203 ~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGl  282 (539)
                          .+...++                  .+.+|   ++.|+.|+|  ++||+||||||+|||+.   ..+.+||+|||+
T Consensus       124 ----l~~~~~~------------------~~~~q---ia~gl~~lH--~~~iiHrDlkp~NIL~~---~~~~~kl~DfG~  173 (309)
T d1fvra_         124 ----LSSQQLL------------------HFAAD---VARGMDYLS--QKQFIHRDLAARNILVG---ENYVAKIADFGL  173 (309)
T ss_dssp             ----SCHHHHH------------------HHHHH---HHHHHHHHH--HTTEECSCCSGGGEEEC---GGGCEEECCTTC
T ss_pred             ----CCHHHHH------------------HHHHH---HHHHHHhhh--cCCccccccccceEEEc---CCCceEEccccc
Confidence                0000000                  03344   677777777  99999999999999994   446799999999


Q ss_pred             ccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCC-CCCCCCCCCCCCcc
Q psy16343        283 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY-PPFYGNCGEDCGWQ  361 (539)
Q Consensus       283 a~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~-~PF~~~~~~~~~~~  361 (539)
                      |+......         .....+||+.|+|||++..      ..|+.++||||+||++|+|++|. +||.+.+       
T Consensus       174 a~~~~~~~---------~~~~~~gt~~y~aPE~l~~------~~~~~~sDvwSfGvil~ell~~~~~p~~~~~-------  231 (309)
T d1fvra_         174 SRGQEVYV---------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-------  231 (309)
T ss_dssp             EESSCEEC---------CC----CCTTTCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-------
T ss_pred             cccccccc---------cccceecCCcccchHHhcc------CCCCccceeehhHHHHHHHHhcCCCCCCCCC-------
Confidence            87543221         1235679999999999974      46999999999999999999965 6776643       


Q ss_pred             cCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       362 ~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                              ...++..|..+. .++  .+..+++++++||.+||..||++|||++|+++|
T Consensus       232 --------~~~~~~~i~~~~-~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         232 --------CAELYEKLPQGY-RLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             --------HHHHHHHGGGTC-CCC--CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------HHHHHHHHHhcC-CCC--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                    344666776653 222  235789999999999999999999999999987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-41  Score=332.97  Aligned_cols=251  Identities=20%  Similarity=0.266  Sum_probs=164.0

Q ss_pred             hhcccCceeceeCceEEEEEEEcc-CC--cEEEEEEeccCCC---CCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccc
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNIL-TE--LEYAVKIIDKLPG---HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENH  121 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~-t~--~~vAvK~i~k~~~---~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~  121 (539)
                      .|++ .+.||+|+||.||+|+... ++  ..||||++++...   ...+++.+|+.+|.++ +|||||++++++.++.. 
T Consensus         9 d~~~-~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~~~~-   85 (273)
T d1u46a_           9 DLRL-LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPPM-   85 (273)
T ss_dssp             GEEE-EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSC-
T ss_pred             HeEE-EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeecch-
Confidence            3665 3679999999999998653 33  3689999865322   2245788999999997 69999999999975421 


Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      +    +                      +.+|.-. +              .+....          ...     ...  
T Consensus        86 ~----l----------------------v~e~~~~-~--------------~l~~~~----------~~~-----~~~--  107 (273)
T d1u46a_          86 K----M----------------------VTELAPL-G--------------SLLDRL----------RKH-----QGH--  107 (273)
T ss_dssp             E----E----------------------EEECCTT-C--------------BHHHHH----------HHH-----GGG--
T ss_pred             h----e----------------------eeeeecC-c--------------chhhhh----------hcc-----cCC--
Confidence            1    1                      1111000 0              000000          000     000  


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD  281 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFG  281 (539)
                           .+...++                  .+..|   ++.|+.|+|  ++||+||||||+|||+..   .+.+||+|||
T Consensus       108 -----l~~~~~~------------------~~~~q---i~~gl~ylH--~~~iiHrDikp~NIll~~---~~~vkl~DfG  156 (273)
T d1u46a_         108 -----FLLGTLS------------------RYAVQ---VAEGMGYLE--SKRFIHRDLAARNLLLAT---RDLVKIGDFG  156 (273)
T ss_dssp             -----SCHHHHH------------------HHHHH---HHHHHHHHH--HTTEECSCCCGGGEEEEE---TTEEEECCCT
T ss_pred             -----CCHHHHH------------------HHHHH---HHHHHHHhh--hCCEeeeeecHHHhcccc---ccceeeccch
Confidence                 0000000                  03344   777888888  899999999999999964   3469999999


Q ss_pred             CccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCc
Q psy16343        282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGW  360 (539)
Q Consensus       282 la~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~  360 (539)
                      +++.+......     .......+||+.|+|||++.+      ..|+.++||||+||++|+|++ |.+||.+.+      
T Consensus       157 l~~~~~~~~~~-----~~~~~~~~~~~~~~aPE~~~~------~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~------  219 (273)
T d1u46a_         157 LMRALPQNDDH-----YVMQEHRKVPFAWCAPESLKT------RTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------  219 (273)
T ss_dssp             TCEECCC-CCE-----EEC-----CCGGGCCHHHHHH------CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------
T ss_pred             hhhhcccCCCc-----ceecCccccCcccCCHHHHhC------CCCCcchhhhhhHHHHHHHHhCCCCCCCCcC------
Confidence            99865432211     011234578899999999974      468999999999999999998 899998754      


Q ss_pred             ccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       361 ~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                               ...+...|......++.  +..+++++++||.+||..||++|||++|++
T Consensus       220 ---------~~~~~~~i~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         220 ---------GSQILHKIDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             ---------HHHHHHHHHTSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ---------HHHHHHHHHhCCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence                     23455667666555443  357899999999999999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-41  Score=347.68  Aligned_cols=274  Identities=21%  Similarity=0.314  Sum_probs=171.2

Q ss_pred             ccc-hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhc----------CCCCeeeeee
Q psy16343         45 FQD-LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ----------GHPNIIQLLE  113 (539)
Q Consensus        45 f~~-~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~----------~HpnIv~l~~  113 (539)
                      |.+ .|++ .+.||+|+||+||+|+++.+|+.||||++++.. .......+|+.+++.+.          +|+|||++++
T Consensus        10 ~~~~rY~i-~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~   87 (362)
T d1q8ya_          10 YKDARYIL-VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   87 (362)
T ss_dssp             ETTTTEEE-EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             ccCCcEEE-EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEE
Confidence            443 3776 578999999999999999999999999997532 22356678888887653          3688998988


Q ss_pred             eecccccccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCccccccccccc
Q psy16343        114 YYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM  193 (539)
Q Consensus       114 ~~~~~~~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~  193 (539)
                      ++......... .          ++            .........             .... ........        
T Consensus        88 ~~~~~~~~~~~-~----------~~------------~~~~~~~~~-------------~~~~-~~~~~~~~--------  122 (362)
T d1q8ya_          88 HFNHKGPNGVH-V----------VM------------VFEVLGENL-------------LALI-KKYEHRGI--------  122 (362)
T ss_dssp             EEEEEETTEEE-E----------EE------------EECCCCEEH-------------HHHH-HHTTTSCC--------
T ss_pred             Eeeecccccee-e----------ee------------eeccccccc-------------cccc-ccccccCC--------
Confidence            87643321100 0          00            000000000             0000 00000000        


Q ss_pred             CCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhh-hCCCCCCCCCCceeecCCCCC
Q psy16343        194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQ-QGIAHRDLKPENILCVHPDQL  272 (539)
Q Consensus       194 ~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~-~gIvHRDlKpeNiL~~~~~~~  272 (539)
                                 ...-+..                     +++|   ++.|+.|+|  + +||+||||||+|||+...+..
T Consensus       123 -----------~~~~i~~---------------------i~~q---il~al~~lh--~~~~IvHrDlKp~NIll~~~~~~  165 (362)
T d1q8ya_         123 -----------PLIYVKQ---------------------ISKQ---LLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSP  165 (362)
T ss_dssp             -----------CHHHHHH---------------------HHHH---HHHHHHHHH--HTTCEECSCCSGGGEEEEEEETT
T ss_pred             -----------cHHHHHH---------------------HHHH---HHHHHHHHh--hhcCcccccCChhHeeeeccCcc
Confidence                       0000111                     3334   667788888  5 899999999999999654321


Q ss_pred             ---CCceeccCCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCC
Q psy16343        273 ---SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP  349 (539)
Q Consensus       273 ---~~ikl~DFGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~P  349 (539)
                         ..+|++|||.+......           ....+||+.|+|||++..      ..|+.++|+||+||++++|++|++|
T Consensus       166 ~~~~~~kl~dfg~s~~~~~~-----------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~~g~~p  228 (362)
T d1q8ya_         166 ENLIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLG------APWGCGADIWSTACLIFELITGDFL  228 (362)
T ss_dssp             TTEEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHT------CCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred             cccceeeEeecccccccccc-----------cccccccccccChhhccc------cCCCccccccchHHHHHHHHHCCCC
Confidence               24899999998754321           235689999999999873      5799999999999999999999999


Q ss_pred             CCCCCCCCCCcccCccchhhHHHHHHHH-----------hcCC--------C----CCC--------------CCCCCCC
Q psy16343        350 FYGNCGEDCGWQRGETCHACQEILFHSI-----------QQGH--------Y----DFP--------------EGEWSTI  392 (539)
Q Consensus       350 F~~~~~~~~~~~~~~~~~~~~~~~~~~i-----------~~~~--------~----~~p--------------~~~~~~~  392 (539)
                      |.+........        ....+...+           ..+.        .    ..+              ...+...
T Consensus       229 F~~~~~~~~~~--------~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (362)
T d1q8ya_         229 FEPDEGHSYTK--------DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE  300 (362)
T ss_dssp             C---------C--------HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHH
T ss_pred             CCCCccccccc--------hhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCccc
Confidence            98654321100        000000000           0000        0    000              0111235


Q ss_pred             CHHHHHHHHHhccccccCCCCHHHHhcCCCccCCC
Q psy16343        393 SDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAG  427 (539)
Q Consensus       393 s~~~~dli~~lL~~dP~~R~ta~e~l~Hpw~~~~~  427 (539)
                      +++++|||.+||++||.+||||+|+|+||||+...
T Consensus       301 ~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence            78999999999999999999999999999998543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=332.38  Aligned_cols=270  Identities=21%  Similarity=0.299  Sum_probs=174.4

Q ss_pred             chhcccCceeceeCceEEEEEEEc-----cCCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNI-----LTELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~-----~t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|++ ++.||+|+||.||+|+..     .++..||||++++... .....+.+|+.++.++.+|||||++++++.+...
T Consensus        23 ~~~~l-~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          23 NRLSF-GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGEEE-EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEE-eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            45665 678999999999999863     4667899999975432 2345688999999998789999999999987654


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEecccc-ccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~-~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      .+   .|      +|.+              +.|-. ..+......       ....   ...+..   ..    .....
T Consensus       102 ~~---lv------mE~~--------------~~g~l~~~l~~~~~~-------~~~~---~~~~~~---~~----~~~~~  141 (311)
T d1t46a_         102 TL---VI------TEYC--------------CYGDLLNFLRRKRDS-------FICS---KTSPAI---ME----DDELA  141 (311)
T ss_dssp             CE---EE------EECC--------------TTEEHHHHHHHTTTT-------C------------------------CC
T ss_pred             EE---EE------EEcC--------------CCCCHHHHHHhcccc-------cccc---cccccc---cc----ccccC
Confidence            32   11      1110              00000 000000000       0000   000000   00    00000


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceecc
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCD  279 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~D  279 (539)
                      .    +   ...+                  ..+..|   ++.++.|+|  ++|||||||||+|||++.   .+.+||+|
T Consensus       142 l----~---~~~~------------------~~~~~q---i~~gl~~LH--~~~ivHrDLKp~NIl~~~---~~~~ki~D  188 (311)
T d1t46a_         142 L----D---LEDL------------------LSFSYQ---VAKGMAFLA--SKNCIHRDLAARNILLTH---GRITKICD  188 (311)
T ss_dssp             C----C---HHHH------------------HHHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEET---TTEEEECC
T ss_pred             C----C---HHHH------------------HHHHHH---HHHHHHHHH--hCCeeecccccccccccc---cCcccccc
Confidence            0    0   0000                  013344   777888888  999999999999999954   45689999


Q ss_pred             CCCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCC
Q psy16343        280 FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDC  358 (539)
Q Consensus       280 FGla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~  358 (539)
                      ||+++........      ......+||+.|+|||++..      ..|+.++|||||||++|+|++ |.+||.+.+..  
T Consensus       189 fG~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~--  254 (311)
T d1t46a_         189 FGLARDIKNDSNY------VVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD--  254 (311)
T ss_dssp             CGGGSCTTSCTTS------EECSSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--
T ss_pred             cchheeccCCCcc------eEeeecccChHHcCHHHhcC------CCCCCcccccchHHHHHHHHhCCCCCCCCCCHH--
Confidence            9999865432211      11234689999999999973      468999999999999999998 66777665422  


Q ss_pred             CcccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        359 GWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                  +.+...+..+. ..+.  ...+++++++||.+||..||++|||++|+++
T Consensus       255 ------------~~~~~~i~~~~-~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         255 ------------SKFYKMIKEGF-RMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ------------HHHHHHHHHTC-CCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------HHHHHHHhcCC-CCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                        22334444443 2222  1467999999999999999999999999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=325.48  Aligned_cols=241  Identities=19%  Similarity=0.281  Sum_probs=164.0

Q ss_pred             hhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc-ccccCC
Q psy16343         48 LYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN-HERHKR  126 (539)
Q Consensus        48 ~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~-~~~~~~  126 (539)
                      .|++ .+.||+|+||.||+|..  +|..||||++++.  ...+.+.+|+++++++ +|||||++++++.+... .+   .
T Consensus         8 ~~~~-~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~---l   78 (262)
T d1byga_           8 ELKL-LQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY---I   78 (262)
T ss_dssp             GEEE-EEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCE---E
T ss_pred             HeEE-eEEEecCCCeEEEEEEE--CCeEEEEEEECcH--HHHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEE---E
Confidence            3554 57899999999999987  5788999999653  2356789999999997 59999999998754321 11   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCC--cccccccccccCCCCCCCCccc
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE--FMAPEIVNAFMGPEASGYDKRC  204 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~--y~aPE~~~~~~~~~~~~~~~~~  204 (539)
                      |      +|.+-                 + +              .+...+....  -+.++.+               
T Consensus        79 v------~ey~~-----------------~-g--------------~L~~~l~~~~~~~l~~~~~---------------  105 (262)
T d1byga_          79 V------TEYMA-----------------K-G--------------SLVDYLRSRGRSVLGGDCL---------------  105 (262)
T ss_dssp             E------ECCCT-----------------T-E--------------EHHHHHHHHHHHHCCHHHH---------------
T ss_pred             E------EeccC-----------------C-C--------------CHHHHHHhcCCCCCCHHHH---------------
Confidence            1      11110                 0 0              0000000000  0000000               


Q ss_pred             chhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       205 Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                              +                  .|..|   ++.|+.|+|  +++|+||||||+|||++   ..+.+||+|||+++
T Consensus       106 --------~------------------~i~~~---i~~al~ylH--~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~s~  151 (262)
T d1byga_         106 --------L------------------KFSLD---VCEAMEYLE--GNNFVHRDLAARNVLVS---EDNVAKVSDFGLTK  151 (262)
T ss_dssp             --------H------------------HHHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTSCEEECCCCC--
T ss_pred             --------H------------------HHHHH---HHhhccccc--cCceeccccchHhheec---CCCCEeecccccce
Confidence                    0                  03344   777888888  99999999999999994   45679999999987


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHh-CCCCCCCCCCCCCCcccC
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQRG  363 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~-G~~PF~~~~~~~~~~~~~  363 (539)
                      .....           ..+.+||+.|+|||++.+      ..|+.++||||+||++|+|++ |++||.+.+.        
T Consensus       152 ~~~~~-----------~~~~~~~~~y~aPE~l~~------~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~--------  206 (262)
T d1byga_         152 EASST-----------QDTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------  206 (262)
T ss_dssp             ---------------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--------
T ss_pred             ecCCC-----------CccccccccCCChHHHhC------CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH--------
Confidence            54321           235678999999999974      468999999999999999998 7899976542        


Q ss_pred             ccchhhHHHHHHHHhcC-CCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        364 ETCHACQEILFHSIQQG-HYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       364 ~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                             ..+...|.++ .+.+|    ..+++++++||++||..||.+|||+.+++++
T Consensus       207 -------~~~~~~i~~~~~~~~~----~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         207 -------KDVVPRVEKGYKMDAP----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             -------GGHHHHHTTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------HHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                   2245566654 33444    3589999999999999999999999999864

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.6e-39  Score=323.81  Aligned_cols=263  Identities=16%  Similarity=0.211  Sum_probs=174.6

Q ss_pred             chhcccCceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCC
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKR  126 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~  126 (539)
                      ..|++ ++.||+|+||+||+|++..+|+.||||++++...  ...+.+|++++..+.+|+||+.+++++..+...+   .
T Consensus         5 ~~Y~i-~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~---~   78 (293)
T d1csna_           5 VHYKV-GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV---L   78 (293)
T ss_dssp             TTEEE-EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE---E
T ss_pred             CceEE-EEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE---E
Confidence            45776 5789999999999999999999999999865432  2346788889988887899999999887654333   1


Q ss_pred             eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccch
Q psy16343        127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL  206 (539)
Q Consensus       127 IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (539)
                      |                       .++. + +              .+...           +.. .   ....      
T Consensus        79 v-----------------------me~~-~-~--------------~l~~~-----------~~~-~---~~~~------   98 (293)
T d1csna_          79 V-----------------------IDLL-G-P--------------SLEDL-----------LDL-C---GRKF------   98 (293)
T ss_dssp             E-----------------------EECC-C-C--------------BHHHH-----------HHH-T---TTCC------
T ss_pred             E-----------------------EEec-C-C--------------CHHHH-----------HHh-h---ccch------
Confidence            1                       1110 0 0              00000           000 0   0000      


Q ss_pred             hhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCC--CCCCceeccCCCcc
Q psy16343        207 WSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPD--QLSPVKLCDFDLGS  284 (539)
Q Consensus       207 ws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~--~~~~ikl~DFGla~  284 (539)
                       +...++                  .+..|   ++.++.|+|  ++||+||||||+|||+....  ..+.+||+|||+|+
T Consensus        99 -~~~~~~------------------~i~~q---~~~~l~~lH--~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~  154 (293)
T d1csna_          99 -SVKTVA------------------MAAKQ---MLARVQSIH--EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  154 (293)
T ss_dssp             -CHHHHH------------------HHHHH---HHHHHHHHH--TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             -hhHHHH------------------HHHHH---HHHHHHHHH--HCCceeccCCccceeecCcccccCCceEEcccceeE
Confidence             000000                  02333   566777777  99999999999999996532  24579999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ........ .........+.+||+.|||||++.+      ..|+.++|||||||++|+|++|.+||.+.....       
T Consensus       155 ~~~~~~~~-~~~~~~~~~~~~GT~~y~aPE~~~~------~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~-------  220 (293)
T d1csna_         155 FYRDPVTK-QHIPYREKKNLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-------  220 (293)
T ss_dssp             ESBCTTTC-CBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-------
T ss_pred             EcccCccc-cceeecccCceEEchhhcCHHHhcC------CCCChHHHHHHhhHHHHHHHhCCCcCCCccchh-------
Confidence            65432211 0111113456799999999999863      569999999999999999999999998764332       


Q ss_pred             cchhhHHHHHHHHhcCCCCCC-CCCCCCCCHHHHHHHHHhccccccCCCCHHHHh
Q psy16343        365 TCHACQEILFHSIQQGHYDFP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVL  418 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~~~p-~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l  418 (539)
                           .......+.......+ ......+++++.+|+..|+..+|++||+.+.+.
T Consensus       221 -----~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         221 -----NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             -----HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             -----HHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence                 1112222322211111 111246789999999999999999999876654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-39  Score=322.75  Aligned_cols=252  Identities=18%  Similarity=0.226  Sum_probs=166.7

Q ss_pred             CceeceeCceEEEEEEEccCC---cEEEEEEeccCC-CCCHHHHHHHHHHHHhhcCCCCeeeeeeeecccccccccCCee
Q psy16343         53 GEILGKGAYASVQTCVNILTE---LEYAVKIIDKLP-GHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIA  128 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~---~~vAvK~i~k~~-~~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~~~~~~~Ii  128 (539)
                      +++||+|+||+||+|+...++   ..||||++++.. .....++.+|+++|.++ +|||||++++++.+.+...      
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~------  104 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSP------  104 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEE------
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCce------
Confidence            367999999999999986643   369999997532 23446789999999997 5999999999875432111      


Q ss_pred             eecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhh
Q psy16343        129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWS  208 (539)
Q Consensus       129 HrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws  208 (539)
                              .+           +.++  ..+.             .+......               ...    ..+...
T Consensus       105 --------~l-----------v~E~--~~~g-------------~l~~~~~~---------------~~~----~~~~~~  131 (311)
T d1r0pa_         105 --------LV-----------VLPY--MKHG-------------DLRNFIRN---------------ETH----NPTVKD  131 (311)
T ss_dssp             --------EE-----------EEEC--CTTC-------------BHHHHHHC---------------TTC----CCBHHH
T ss_pred             --------EE-----------EEEE--eecC-------------chhhhhcc---------------ccc----cchHHH
Confidence                    00           1111  0000             00000000               000    000000


Q ss_pred             hhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccccc
Q psy16343        209 LGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF  288 (539)
Q Consensus       209 ~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~~~  288 (539)
                      .-.                     +..|   ++.++.|+|  ++||+||||||+|||++   ..+.+||+|||+++....
T Consensus       132 ~~~---------------------i~~q---ia~gL~~lH--~~~iiHrDLK~~NILl~---~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         132 LIG---------------------FGLQ---VAKGMKFLA--SKKFVHRDLAARNCMLD---EKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             HHH---------------------HHHH---HHHHHHHHH--HTTCCCSCCSGGGEEEC---TTCCEEECSSGGGCCTTT
T ss_pred             HHH---------------------HHHH---HHHhhhhhc--ccCcccCCccHHhEeEC---CCCCEEEecccchhhccc
Confidence            000                     2233   566777777  99999999999999994   456799999999986543


Q ss_pred             CCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCccchh
Q psy16343        289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA  368 (539)
Q Consensus       289 ~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~~~~~  368 (539)
                      .....    ........||+.|+|||++..      ..|+.++||||+||++|+|++|..||.....             
T Consensus       183 ~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDI~SfGivl~El~t~~~p~~~~~~-------------  239 (311)
T d1r0pa_         183 KEFDS----VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-------------  239 (311)
T ss_dssp             TTCCC----TTCTTCSSCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCC----------------
T ss_pred             ccccc----ceecccccccccccChHHHhc------CCCCChhHhhhhHHHHHHHHHCCCCCCCCCC-------------
Confidence            32211    112234579999999999874      4689999999999999999998777765321             


Q ss_pred             hHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       369 ~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                       ...+...+..+.....+   ..+++++.+||.+||..||++||++.|+++|
T Consensus       240 -~~~~~~~i~~g~~~~~p---~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         240 -TFDITVYLLQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             ----CHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -HHHHHHHHHcCCCCCCc---ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence             11234455555432211   3689999999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-39  Score=322.37  Aligned_cols=261  Identities=17%  Similarity=0.201  Sum_probs=173.9

Q ss_pred             chhcccCceeceeCceEEEEEEEcc-----CCcEEEEEEeccCCC-CCHHHHHHHHHHHHhhcCCCCeeeeeeeeccccc
Q psy16343         47 DLYRLKGEILGKGAYASVQTCVNIL-----TELEYAVKIIDKLPG-HSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDEN  120 (539)
Q Consensus        47 ~~y~~~~~~LG~G~fG~V~~~~~~~-----t~~~vAvK~i~k~~~-~~~~~~~~Ei~~l~~~~~HpnIv~l~~~~~~~~~  120 (539)
                      +.|.+ ++.||+|+||.||+|.+..     ++..||||++++... .....+.+|+++++++ +|||||++++++.....
T Consensus        20 ~~~~l-~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          20 EKITM-SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGEEE-EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSS
T ss_pred             HHeEE-eeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecCCc
Confidence            45554 5789999999999998753     457899999975432 2334678999999997 59999999999866543


Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      .+   .                       +.+|.-. +              .+..      |+.........    ...
T Consensus        98 ~~---l-----------------------v~e~~~~-g--------------~l~~------~~~~~~~~~~~----~~~  126 (308)
T d1p4oa_          98 TL---V-----------------------IMELMTR-G--------------DLKS------YLRSLRPAMAN----NPV  126 (308)
T ss_dssp             CE---E-----------------------EEECCTT-C--------------BHHH------HHHHHHHHHHH----CTT
T ss_pred             ee---E-----------------------EEeecCC-C--------------CHHH------HHHhccccccc----ccc
Confidence            22   1                       1122100 0              0000      00000000000    000


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF  280 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DF  280 (539)
                      ..   .++...++.                  +..+   ++.++.|+|  +++|+||||||+|||+   +..+.+||+||
T Consensus       127 ~~---~~~~~~~~~------------------i~~~---ia~gl~~LH--~~~ivHrDlk~~NiLl---d~~~~~Kl~DF  177 (308)
T d1p4oa_         127 LA---PPSLSKMIQ------------------MAGE---IADGMAYLN--ANKFVHRDLAARNCMV---AEDFTVKIGDF  177 (308)
T ss_dssp             CC---CCCHHHHHH------------------HHHH---HHHHHHHHH--HTTCBCSCCSGGGEEE---CTTCCEEECCT
T ss_pred             cC---CCCHHHHHH------------------HHHH---HHHHHHHHh--hCCeeeceEcCCceee---cCCceEEEeec
Confidence            00   000111111                  2223   566777887  9999999999999999   44567999999


Q ss_pred             CCccccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhC-CCCCCCCCCCCCC
Q psy16343        281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCG  359 (539)
Q Consensus       281 Gla~~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G-~~PF~~~~~~~~~  359 (539)
                      |+|+........      ......+||+.|+|||++.+      ..|+.++||||+||++|+|++| .+||.+.+     
T Consensus       178 Gla~~~~~~~~~------~~~~~~~~t~~y~aPe~l~~------~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~-----  240 (308)
T d1p4oa_         178 GMTRDIYETDYY------RKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----  240 (308)
T ss_dssp             TCCCGGGGGGCE------EGGGSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----
T ss_pred             ccceeccCCcce------eeccceecccccCCHHHHcc------CCCCcccccccHHHHHHHHHhCCCCCCCCCC-----
Confidence            999754332211      11235589999999999974      4688999999999999999998 58886643     


Q ss_pred             cccCccchhhHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHhccccccCCCCHHHHhc
Q psy16343        360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK  419 (539)
Q Consensus       360 ~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~s~~~~dli~~lL~~dP~~R~ta~e~l~  419 (539)
                                ...++..+..+.....   ...+++++++||.+||+.||++|||++|+++
T Consensus       241 ----------~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         241 ----------NEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             ----------HHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------HHHHHHHHHhCCCCCC---cccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                      2345666766553211   1468999999999999999999999999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-39  Score=321.10  Aligned_cols=272  Identities=20%  Similarity=0.239  Sum_probs=162.8

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHH--hhcCCCCeeeeeeeecccccccccCCeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFH--HCQGHPNIIQLLEYYEDDENHERHKRIAHR  130 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~--~~~~HpnIv~l~~~~~~~~~~~~~~~IiHr  130 (539)
                      .+.||+|+||.||+|+.  +|+.||||+++..   ......+|.+++.  .+ +|||||++++++.+.......      
T Consensus         8 ~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~~------   75 (303)
T d1vjya_           8 QESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQ------   75 (303)
T ss_dssp             EEEEECCSSSEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE------
T ss_pred             EEEEeeCCCeEEEEEEE--CCEEEEEEEECcc---chhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcceE------
Confidence            57899999999999975  7899999999642   2345556665553  33 699999999988654321100      


Q ss_pred             cCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhh
Q psy16343        131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG  210 (539)
Q Consensus       131 DLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~G  210 (539)
                            +          .-|.+|.-. +              .+...           +..      ...    + |  .
T Consensus        76 ------~----------~lv~Ey~~~-g--------------~L~~~-----------l~~------~~l----~-~--~  100 (303)
T d1vjya_          76 ------L----------WLVSDYHEH-G--------------SLFDY-----------LNR------YTV----T-V--E  100 (303)
T ss_dssp             ------E----------EEEEECCTT-C--------------BHHHH-----------HHH------CCB----C-H--H
T ss_pred             ------E----------EEEEecccC-C--------------CHHHH-----------Hhc------CCC----C-H--H
Confidence                  0          012222100 0              00000           000      000    0 0  0


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCCccCccccchhhhHHHhh------hhhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHS------IQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       211 vil~~lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~h~------h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      ..+                  .+..+   ++.++.|+|.      |++|||||||||+|||++   ..+.+||+|||+++
T Consensus       101 ~~~------------------~~~~~---ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~---~~~~~Kl~DFGl~~  156 (303)
T d1vjya_         101 GMI------------------KLALS---TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAV  156 (303)
T ss_dssp             HHH------------------HHHHH---HHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             HHH------------------HHHHH---HHHHHHHHHHhhhhhccCCCeeccccCccceEEc---CCCCeEEEecCccc
Confidence            000                  02222   5566777773      357999999999999994   44679999999998


Q ss_pred             ccccCCCCCCCCCCCCccccccCcccccchhhcccCCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCCCCCCCCcccCc
Q psy16343        285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE  364 (539)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~t~~GT~~Y~APEvl~~~~~~~~~~y~~~~DiWSlGvily~ll~G~~PF~~~~~~~~~~~~~~  364 (539)
                      ..........    ....+.+||+.|||||++..........|+.++||||+||++|+|++|.+||.........+....
T Consensus       157 ~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~  232 (303)
T d1vjya_         157 RHDSATDTID----IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  232 (303)
T ss_dssp             EEETTTTEEC----C----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred             cccCCCccee----ccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcc
Confidence            6543321110    122357899999999998642111111367789999999999999999998865443322221111


Q ss_pred             cchhhHHHHHHHHhcCCC--CCCCCCCCC--CCHHHHHHHHHhccccccCCCCHHHHhcC
Q psy16343        365 TCHACQEILFHSIQQGHY--DFPEGEWST--ISDEAKDLIRRLLVKDARKRLSAASVLKH  420 (539)
Q Consensus       365 ~~~~~~~~~~~~i~~~~~--~~p~~~~~~--~s~~~~dli~~lL~~dP~~R~ta~e~l~H  420 (539)
                      ........+...+..+..  .+|. .|..  ...++.+|+.+||+.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         233 PSDPSVEEMRKVVCEQKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CSSCCHHHHHHHHTTSCCCCCCCG-GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cccchHHHHHHHHhccccCCCCCc-ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            111122333333433332  2222 2211  23468899999999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.2e-19  Score=180.47  Aligned_cols=89  Identities=33%  Similarity=0.649  Sum_probs=73.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.......        ...+.+||+.|+|||++.      ...|
T Consensus       120 ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~~--------~~~~~~GT~~Y~aPE~~~------~~~y  182 (337)
T d1o6la_         120 YLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA--------TMKTFCGTPEYLAPEVLE------DNDY  182 (337)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTTC--------CBCCCEECGGGCCGGGGS------SSCB
T ss_pred             hhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCCc--------ccccceeCHHHhhhhhcc------CCCC
Confidence            4578899999999999999   4556799999999864322111        233568999999999985      3578


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|++||.+.
T Consensus       183 ~~~~DiwSlGvilyeml~G~~pf~~~  208 (337)
T d1o6la_         183 GRAVDWWGLGVVMYEMMCGRLPFYNQ  208 (337)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ChhhcccchhhHHHHHHHCCCCCCCc
Confidence            99999999999999999999999874

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.3e-19  Score=174.11  Aligned_cols=87  Identities=37%  Similarity=0.653  Sum_probs=71.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||++......          .....+||+.|||||++..      ..|
T Consensus       121 ~lH~~~ivHrDiKp~Nill~---~~~~~kl~DFG~a~~~~~~----------~~~~~~Gt~~Y~APE~~~~------~~~  181 (263)
T d2j4za1         121 YCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS----------RRTTLCGTLDYLPPEMIEG------RMH  181 (263)
T ss_dssp             HHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCSCSCCCCC----------CCEETTEEGGGCCHHHHTT------CCC
T ss_pred             HHHHCCeeeeeeccccceec---CCCCEeecccceeeecCCC----------cccccCCCCcccCHHHHcC------CCC
Confidence            45778999999999999994   4567999999998543221          1234579999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       182 ~~~~DiwSlGvilyell~G~~Pf~~~  207 (263)
T d2j4za1         182 DEKVDLWSLGVLCYEFLVGKPPFEAN  207 (263)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhhhhHhHHHHHHhcCCCCCCCC
Confidence            89999999999999999999999764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.75  E-value=4.3e-19  Score=163.78  Aligned_cols=41  Identities=24%  Similarity=0.334  Sum_probs=34.0

Q ss_pred             chhhhHHHhhhhhCCCCCCCCCCceeecCCCCCCCceeccCCCcccc
Q psy16343        240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI  286 (539)
Q Consensus       240 ~~~~~~~~h~h~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~~~  286 (539)
                      ++.++.|+|  ++||+||||||+|||+..    ..++|+|||+|...
T Consensus       112 l~~~l~~lH--~~giiHrDiKP~NILv~~----~~~~liDFG~a~~~  152 (191)
T d1zara2         112 ILEEVAKFY--HRGIVHGDLSQYNVLVSE----EGIWIIDFPQSVEV  152 (191)
T ss_dssp             HHHHHHHHH--HTTEECSCCSTTSEEEET----TEEEECCCTTCEET
T ss_pred             HHHHHHHHh--hCCEEEccCChhheeeeC----CCEEEEECCCcccC
Confidence            566777777  999999999999999963    23899999998654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.2e-19  Score=175.86  Aligned_cols=89  Identities=35%  Similarity=0.600  Sum_probs=72.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||+++.+.....        .....+||+.|+|||++..      ..|
T Consensus       131 yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a~~~~~~~~--------~~~~~~gt~~Y~aPE~~~~------~~~  193 (293)
T d1yhwa1         131 FLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQS--------KRSTMVGTPYWMAPEVVTR------KAY  193 (293)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSTTC--------CBCCCCSCGGGCCHHHHSS------SCB
T ss_pred             HHHHCCCcccCCcHHHeEEC---CCCcEeeccchhheeeccccc--------cccccccCCCccChhhhcC------CCC
Confidence            45788999999999999994   456799999999865432221        2235679999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       194 ~~~~DiwSlGvilyemltG~~Pf~~~  219 (293)
T d1yhwa1         194 GPKVDIWSLGIMAIEMIEGEPPYLNE  219 (293)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CchhceehHhHHHHHHhhCCCCCCCC
Confidence            89999999999999999999999764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2e-19  Score=176.88  Aligned_cols=91  Identities=34%  Similarity=0.606  Sum_probs=70.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++   +..+.+||+|||+++.+.......      ...+.+||+.|+|||++..      ..|
T Consensus       123 ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~~~------~~~~~~GT~~Y~APE~~~~------~~~  187 (288)
T d1uu3a_         123 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQA------RANSFVGTAQYVSPELLTE------KSA  187 (288)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----------------CCCCGGGCCHHHHHT------CCC
T ss_pred             hhccccEEcCcCCcccccc---CCCceEEecccccceecccCCccc------ccccccCCccccCceeecc------CCC
Confidence            4577899999999999999   455679999999986543221111      1234679999999999863      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       188 ~~~~DiwSlGvilyell~g~~Pf~~~  213 (288)
T d1uu3a_         188 CKSSDLWALGCIIYQLVAGLPPFRAG  213 (288)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcccceehhhHHHHHHhhCCCCCCCc
Confidence            99999999999999999999999764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=4.9e-19  Score=176.46  Aligned_cols=86  Identities=40%  Similarity=0.758  Sum_probs=71.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++....           ...+.+||+.|||||++.      ...|
T Consensus       119 ~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~-----------~~~~~~Gt~~Y~APE~l~------~~~y  178 (316)
T d1fota_         119 YLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD-----------VTYTLCGTPDYIAPEVVS------TKPY  178 (316)
T ss_dssp             HHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS-----------CBCCCCSCTTTCCHHHHT------TCCB
T ss_pred             hhccCcEEccccCchheeE---cCCCCEEEecCccceEecc-----------ccccccCcccccCHHHHc------CCCC
Confidence            4577899999999999999   4556799999999864321           122568999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       179 ~~~~DiwSlGvilyemltG~~Pf~~~  204 (316)
T d1fota_         179 NKSIDWWSFGILIYEMLAGYTPFYDS  204 (316)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhccccchhHHHHHhCCCCCCCc
Confidence            89999999999999999999999764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.8e-19  Score=175.60  Aligned_cols=92  Identities=30%  Similarity=0.519  Sum_probs=70.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||+++   ..+.+||+|||+++.........      ...+.+||+.|||||++..     ...+
T Consensus       118 ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a~~~~~~~~~~------~~~~~~GT~~Y~APE~~~~-----~~~~  183 (271)
T d1nvra_         118 YLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLKR-----REFH  183 (271)
T ss_dssp             HHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCEECEETTEEC------CBCCCCSCGGGSCTHHHHC-----SSBC
T ss_pred             HHHHcCCccCcccHHHEEEC---CCCCEEEccchhheeeccCCccc------cccceeeCcCccCHhHhcC-----CCCC
Confidence            44777999999999999994   44579999999986543322111      2235689999999998853     1224


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       184 ~~~~DiwSlGvilyeml~G~~pf~~~  209 (271)
T d1nvra_         184 AEPVDVWSCGIVLTAMLAGELPWDQP  209 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             CCceeeeHhHHHHHHHHhCCCCCCCC
Confidence            67899999999999999999999764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=3.2e-19  Score=177.11  Aligned_cols=91  Identities=43%  Similarity=0.788  Sum_probs=65.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++...+..+.+||+|||+++......         ...+.+||+.|||||++..      ..|
T Consensus       122 ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~---------~~~~~~GT~~y~APE~~~~------~~~  186 (307)
T d1a06a_         122 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---------VLSTACGTPGYVAPEVLAQ------KPY  186 (307)
T ss_dssp             HHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---------------------------CTTSCHHHHTT------CCC
T ss_pred             hhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCC---------eeeeeeeCccccCcHHHcC------CCC
Confidence            4577899999999999999876777889999999985432221         2235679999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       187 ~~~~DiwSlGvilyell~g~~Pf~~~  212 (307)
T d1a06a_         187 SKAVDCWSIGVIAYILLCGYPPFYDE  212 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHHhhhhhHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999764

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=7.1e-19  Score=178.73  Aligned_cols=88  Identities=34%  Similarity=0.606  Sum_probs=72.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.....          .....+||+.|+|||++..     ...|
T Consensus       122 ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~~~----------~~~~~~GT~~y~APE~~~~-----~~~~  183 (364)
T d1omwa3         122 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK----------KPHASVGTHGYMAPEVLQK-----GVAY  183 (364)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECSSS----------CCCSCCSCGGGCCHHHHST-----TCCC
T ss_pred             HHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecCCC----------cccccccccccchhHHhhc-----CCCC
Confidence            5577899999999999999   45567999999998643322          1234579999999998842     3468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       184 ~~~~DiwSlGvilyemltG~~Pf~~~  209 (364)
T d1omwa3         184 DSSADWFSLGCMLFKLLRGHSPFRQH  209 (364)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             CcccchhHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.5e-19  Score=179.20  Aligned_cols=87  Identities=32%  Similarity=0.606  Sum_probs=69.5

Q ss_pred             ccccC-CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~-~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|++ +|+||||||+|||+   +..+.+||+|||+++.....          ...+.+||+.|+|||++..      ..
T Consensus       119 yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~----------~~~~~~GT~~Y~APEvl~~------~~  179 (322)
T d1s9ja_         119 YLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS----------MANSFVGTRSYMSPERLQG------TH  179 (322)
T ss_dssp             HHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHH----------TC---CCSSCCCCHHHHHC------SC
T ss_pred             HHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCCC----------ccccccCCccccCchHHcC------CC
Confidence            34543 89999999999999   44567999999998643221          1225689999999999863      56


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      |+.++||||+||++|+|++|+.||.+.
T Consensus       180 y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         180 YSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            999999999999999999999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=4.4e-19  Score=173.41  Aligned_cols=93  Identities=31%  Similarity=0.478  Sum_probs=69.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||++   ..+.+||+|||+++.........      ...+..||+.|||||++...   ....|
T Consensus       119 yLH~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla~~~~~~~~~~------~~~~~~gt~~y~APE~l~~~---~~~~~  186 (276)
T d1uwha_         119 YLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSH------QFEQLSGSILWMAPEVIRMQ---DKNPY  186 (276)
T ss_dssp             HHHHTTCCCSCCCGGGEEEE---TTSSEEECCCCCSCC------------------CCCCGGGCCHHHHTTC---SSCCC
T ss_pred             HHhcCCEeccccCHHHEEEc---CCCCEEEccccceeeccccCCcc------cccccccCcccCCHHHHhcc---cCCCC
Confidence            45778999999999999994   45679999999985433211110      22345799999999987531   23458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|||+||+.||.+
T Consensus       187 ~~~sDiwS~Gv~l~el~tg~~Pf~~  211 (276)
T d1uwha_         187 SFQSDVYAFGIVLYELMTGQLPYSN  211 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CchhhhhhhHHHHHHHHHCCCCCCC
Confidence            8999999999999999999999976

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=9.6e-19  Score=170.38  Aligned_cols=86  Identities=28%  Similarity=0.488  Sum_probs=68.7

Q ss_pred             ccccCC--eeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKR--IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~--IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|.++  ||||||||+|||+..  ..+.+||+|||+++.....          ...+.+||+.|||||++.       .
T Consensus       127 yLH~~~~~IiHrDiKp~NILl~~--~~~~~Kl~DFGla~~~~~~----------~~~~~~GT~~Y~aPE~~~-------~  187 (270)
T d1t4ha_         127 FLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS----------FAKAVIGTPEFMAPEMYE-------E  187 (270)
T ss_dssp             HHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCTT----------SBEESCSSCCCCCGGGGG-------T
T ss_pred             HHHHCCCCEEeCCcChhhceeeC--CCCCEEEeecCcceeccCC----------ccCCcccCccccCHHHhC-------C
Confidence            345556  999999999999953  2457999999998532211          123568999999999874       3


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      .++.++||||+||++|+|++|+.||.+
T Consensus       188 ~~~~~~DIwSlGvilyel~~g~~Pf~~  214 (270)
T d1t4ha_         188 KYDESVDVYAFGMCMLEMATSEYPYSE  214 (270)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCCcCchhhHHHHHHHHHHCCCCCCC
Confidence            589999999999999999999999975

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=6e-19  Score=178.28  Aligned_cols=86  Identities=40%  Similarity=0.736  Sum_probs=71.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+..           ...+.+||+.|||||++.      ...+
T Consensus       156 yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~-----------~~~~~~Gt~~Y~APE~~~------~~~~  215 (350)
T d1rdqe_         156 YLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG-----------RTWTLCGTPEALAPEIIL------SKGY  215 (350)
T ss_dssp             HHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS-----------CBCCCEECGGGCCHHHHT------TCCB
T ss_pred             HHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeeccc-----------ccccccCccccCCHHHHc------CCCC
Confidence            4577899999999999999   4456799999999865432           122467999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       216 ~~~~DiwSlGvilyemltG~~Pf~~~  241 (350)
T d1rdqe_         216 NKAVDWWALGVLIYEMAAGYPPFFAD  241 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CccccccchhHHHHHHHhCCCCCCCc
Confidence            89999999999999999999999764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=8.6e-19  Score=176.11  Aligned_cols=91  Identities=46%  Similarity=0.867  Sum_probs=75.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++...+..+.+||+|||+++......         ...+.+||+.|+|||++..      ..|
T Consensus       126 ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~------~~y  190 (335)
T d2ozaa1         126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---------SLTTPCYTPYYVAPEVLGP------EKY  190 (335)
T ss_dssp             HHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC---------CCCCCSCCCSSCCCCCCCG------GGG
T ss_pred             HHHHcCCccccccccccccccccccccccccccceeeeccCCC---------ccccccCCcccCCcHHHcC------CCC
Confidence            4577799999999999999876677889999999986543222         2235679999999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|+||.+||.+.
T Consensus       191 ~~~~DiwSlGvily~lltg~~Pf~~~  216 (335)
T d2ozaa1         191 DKSCDMWSLGVIMYILLCGYPPFYSN  216 (335)
T ss_dssp             SHHHHHHHHHHHHHHHTTSSCSCEET
T ss_pred             CHHHHHHhhchhHHHHhhCCCCCCCC
Confidence            89999999999999999999999764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1e-18  Score=171.87  Aligned_cols=94  Identities=30%  Similarity=0.417  Sum_probs=72.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.+||+|||++........        ...+.+||+.|+|||++.... .....|
T Consensus       125 ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a~~~~~~~~--------~~~~~~Gt~~y~APE~l~~~~-~~~~~y  192 (288)
T d2jfla1         125 YLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQ--------RRDSFIGTPYWMAPEVVMCET-SKDRPY  192 (288)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEECHHHHH--------HHTCCCSCCTTCCHHHHTTCS-TTTSST
T ss_pred             HHHHCCEEEeecChhheeEC---CCCCEEEEechhhhccCCCcc--------cccccccccccCCHHHHhhcc-cCCCCC
Confidence            45778999999999999994   456799999999754321100        112467999999999875321 123568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       193 ~~k~DiwSlGvilyemltg~~Pf~~~  218 (288)
T d2jfla1         193 DYKADVWSLGITLIEMAEIEPPHHEL  218 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ChhhhHHHHHHHHHHHhhCCCCCCCC
Confidence            99999999999999999999999764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.71  E-value=1.7e-18  Score=171.88  Aligned_cols=88  Identities=34%  Similarity=0.521  Sum_probs=71.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||++.....            ....+||+.|||||++...   ....|
T Consensus       130 yLH~~~iiHrDiKp~NILl~---~~~~~Kl~DFG~a~~~~~------------~~~~~GT~~Y~APE~~~~~---~~~~y  191 (309)
T d1u5ra_         130 YLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP------------ANSFVGTPYWMAPEVILAM---DEGQY  191 (309)
T ss_dssp             HHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTCBSSSS------------BCCCCSCGGGCCHHHHTTT---TSCCB
T ss_pred             HHHhCCEeccCCCcceEEEC---CCCCEEEeecccccccCC------------CCccccCccccCHHHHhcc---CCCCc
Confidence            45778999999999999994   456799999999854221            1245799999999988532   12458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       192 ~~~~DiwSlGvilyel~~g~~Pf~~~  217 (309)
T d1u5ra_         192 DGKVDVWSLGITCIELAERKPPLFNM  217 (309)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CchhhhhhHHHHHHHHHHCCCCCCCC
Confidence            89999999999999999999999763

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=8.6e-19  Score=170.65  Aligned_cols=84  Identities=38%  Similarity=0.654  Sum_probs=59.1

Q ss_pred             CeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccc
Q psy16343        126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCD  205 (539)
Q Consensus       126 ~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  205 (539)
                      .||||||||+||+++   ..+.+||+|||+++.+.....        ...+.+||+.|||||++.      ...|+.++|
T Consensus       134 ~IiHrDiKp~NIll~---~~~~vkl~DFG~a~~~~~~~~--------~~~~~~gt~~Y~APE~l~------~~~~~~~~D  196 (269)
T d2java1         134 TVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHDTS--------FAKAFVGTPYYMSPEQMN------RMSYNEKSD  196 (269)
T ss_dssp             ------CCGGGEEEC---TTSCEEECCHHHHHHC-------------------CCCSCCCHHHHT------TCCCCHHHH
T ss_pred             CEEeCcCchhhcCcC---CCCcEEEeeccceeecccCCC--------ccccCCCCcccCCHHHHc------CCCCChHHH
Confidence            599999999999994   456799999999865432211        122467999999999985      356899999


Q ss_pred             hhhhhHHHHHHHhCCCCCCCC
Q psy16343        206 LWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       206 vws~Gvil~~lltG~~Pf~~~  226 (539)
                      |||+||++|+|++|..||.+.
T Consensus       197 IwSlGvilyel~tg~~Pf~~~  217 (269)
T d2java1         197 IWSLGCLLYELCALMPPFTAF  217 (269)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCS
T ss_pred             HHhhCHHHHHHhhCCCCCCCC
Confidence            999999999999999999764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.9e-18  Score=168.57  Aligned_cols=90  Identities=31%  Similarity=0.472  Sum_probs=72.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.......        ...+.+||+.|+|||++..     ...|
T Consensus       115 ~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-----~~~~  178 (299)
T d1ua2a_         115 YLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNR--------AYTHQVVTRWYRAPELLFG-----ARMY  178 (299)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCC--------CCCCSCCCCTTCCHHHHTT-----CSCC
T ss_pred             HhhccceecccCCcceEEe---cCCCccccccCccccccCCCcc--------cccceecChhhccHHHHcc-----CCCC
Confidence            4577899999999999999   4556799999999854332211        1234579999999998752     3458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       179 ~~~~DiwSlGvil~el~~g~~pf~~~  204 (299)
T d1ua2a_         179 GVGVDMWAVGCILAELLLRVPFLPGD  204 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ChhhhhhhcchHHHHHHhCcCCCCCC
Confidence            89999999999999999999999875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.69  E-value=3.9e-18  Score=172.16  Aligned_cols=90  Identities=38%  Similarity=0.647  Sum_probs=72.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++... ..+.+||+|||+++.+....         ...+..||+.|||||++..      ..+
T Consensus       139 ylH~~~iiHrDiKp~NIll~~~-~~~~vkL~DFG~a~~~~~~~---------~~~~~~gT~~Y~aPEv~~~------~~~  202 (350)
T d1koaa2         139 HMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQ---------SVKVTTGTAEFAAPEVAEG------KPV  202 (350)
T ss_dssp             HHHHTTEECCCCCGGGEEESST-TSCCEEECCCTTCEECCTTS---------CEEEECSCTTTCCHHHHHT------CCB
T ss_pred             HHHhcCCeeeeechhHeeeccC-CCCeEEEeecchheeccccc---------ccceecCcccccCHHHHcC------CCC
Confidence            3477899999999999998543 23679999999986543221         2234679999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       203 ~~~~DiwSlGvilyell~G~~Pf~~~  228 (350)
T d1koaa2         203 GYYTDMWSVGVLSYILLSGLSPFGGE  228 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ChhHhhhhhhHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.69  E-value=4.7e-18  Score=171.74  Aligned_cols=90  Identities=39%  Similarity=0.725  Sum_probs=72.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+... ..+.+||+|||++..+....         ...+..||+.|+|||++.      ...+
T Consensus       142 ylH~~~iiHRDiKp~NILl~~~-~~~~vkL~DFGla~~~~~~~---------~~~~~~gt~~y~aPE~~~------~~~~  205 (352)
T d1koba_         142 HMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDE---------IVKVTTATAEFAAPEIVD------REPV  205 (352)
T ss_dssp             HHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTS---------CEEEECSSGGGCCHHHHT------TCCB
T ss_pred             HHHHCCeeeccccccccccccc-CCCeEEEeecccceecCCCC---------ceeeccCcccccCHHHHc------CCCC
Confidence            3477899999999999999532 34679999999986543221         223457999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       206 ~~~~DiwSlGvilyelltG~~Pf~~~  231 (352)
T d1koba_         206 GFYTDMWAIGVLGYVLLSGLSPFAGE  231 (352)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             CCccchHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9.3e-18  Score=167.39  Aligned_cols=89  Identities=35%  Similarity=0.601  Sum_probs=72.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.......        ......||+.|+|||++..      ..|
T Consensus       118 ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~------~~~  180 (320)
T d1xjda_         118 FLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDA--------KTNTFCGTPDYIAPEILLG------QKY  180 (320)
T ss_dssp             HHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCTTC--------CBCCCCSCGGGCCHHHHTT------CCB
T ss_pred             HHHhCCeeeccCcccceee---cCCCceeccccchhhhcccccc--------cccccCCCCCcCCHHHHcC------CCC
Confidence            4577899999999999999   4556799999999864332211        1224579999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       181 ~~~~DiwSlGvilyemltG~~PF~~~  206 (320)
T d1xjda_         181 NHSVDWWSFGVLLYEMLIGQSPFHGQ  206 (320)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchhhhhhhhHHHHHHHhCCCCCCCC
Confidence            99999999999999999999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=5.6e-18  Score=167.73  Aligned_cols=88  Identities=35%  Similarity=0.574  Sum_probs=71.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||++.......         .....+||+.|+|||++.      ...|
T Consensus       131 yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg~~~~~~~~~---------~~~~~~gT~~Y~APE~~~------~~~y  192 (305)
T d1blxa_         131 FLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQM---------ALTSVVVTLWYRAPEVLL------QSSY  192 (305)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECSCCSCCCCCGGG---------GGCCCCCCCTTCCHHHHT------TCCC
T ss_pred             HHHhCCEEecCCCccEEEE---cCCCCeeecchhhhhhhcccc---------cCCCcccChhhcCcchhc------CCCC
Confidence            4577899999999999999   455679999999875432211         223567999999999885      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       193 ~~~~DiwSlG~il~ell~g~~pf~~~  218 (305)
T d1blxa_         193 ATPVDLWSVGCIFAEMFRRKPLFRGS  218 (305)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ChhehhhchHHHHHHHHHCCCCCCCC
Confidence            99999999999999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=8.1e-18  Score=166.18  Aligned_cols=99  Identities=24%  Similarity=0.261  Sum_probs=76.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++...+....++|+|||+++.+........ .......+.+||+.|+|||.+.      ...+
T Consensus       118 ~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------~~~~  190 (299)
T d1ckia_         118 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH-IPYRENKNLTGTARYASINTHL------GIEQ  190 (299)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB-CCCCBCCSCCCCSSSCCHHHHT------TBCC
T ss_pred             HHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccc-eeccccCCcCCCccccCHHHHh------CCCC
Confidence            45778999999999999987666677899999999865543222110 0001223567999999999875      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|||||||++|+|++|..||.+.
T Consensus       191 ~~~~DiwSlG~~l~el~tg~~P~~~~  216 (299)
T d1ckia_         191 SRRDDLESLGYVLMYFNLGSLPWQGL  216 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             CChhhEEecCHHHHHHHhCCCccccc
Confidence            99999999999999999999999764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3e-18  Score=171.42  Aligned_cols=91  Identities=29%  Similarity=0.507  Sum_probs=71.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||+++.........      ...+..||+.|||||++..      ..+
T Consensus       179 yLH~~~IiHRDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~~~------~~~~~~gt~~y~aPE~l~~------~~~  243 (325)
T d1rjba_         179 FLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYV------VRGNARLPVKWMAPESLFE------GIY  243 (325)
T ss_dssp             HHHHTTEEETTCSGGGEEEE---TTTEEEECCCGGGSCGGGCTTSE------EETTEEECGGGCCHHHHHH------CCC
T ss_pred             HHHhCCeeeccCchhccccc---cCCeEEEeeccccccccCCCcee------eeccccCCCccCChHHHcC------CCC
Confidence            34778999999999999994   45679999999986543222110      1124468999999998853      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||++ |.+||.+.
T Consensus       244 ~~~~DiwS~Gvil~emlt~g~~Pf~~~  270 (325)
T d1rjba_         244 TIKSDVWSYGILLWEIFSLGVNPYPGI  270 (325)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CcceeccchhHHHHHHHhCCCCCCCCC
Confidence            999999999999999997 89999764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.67  E-value=1.5e-17  Score=163.79  Aligned_cols=99  Identities=23%  Similarity=0.304  Sum_probs=74.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCC--CCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPD--QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~--~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      +.|.++||||||||+||++....  ..+.+||+|||+++.......... .......+.+||+.|||||++.      ..
T Consensus       116 ~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~-~~~~~~~~~~GT~~y~aPE~~~------~~  188 (293)
T d1csna_         116 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH-IPYREKKNLSGTARYMSINTHL------GR  188 (293)
T ss_dssp             HHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHT------TC
T ss_pred             HHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccc-eeecccCceEEchhhcCHHHhc------CC
Confidence            45778999999999999997543  246799999999865433221110 0001223568999999999885      35


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++.++|+||+||++|+|++|..||.+.
T Consensus       189 ~~~~~~DiwSlG~~l~elltg~~Pf~~~  216 (293)
T d1csna_         189 EQSRRDDLEALGHVFMYFLRGSLPWQGL  216 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCChHHHHHHhhHHHHHHHhCCCcCCCc
Confidence            6899999999999999999999999764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.1e-17  Score=162.76  Aligned_cols=91  Identities=42%  Similarity=0.713  Sum_probs=73.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCC-CCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQ-LSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG  199 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~-~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~  199 (539)
                      +.|.++|+||||||+||++...+. ...+|++|||++.......         ...+..||+.|+|||++..      ..
T Consensus       128 yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~---------~~~~~~~t~~y~APE~~~~------~~  192 (293)
T d1jksa_         128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNY------EP  192 (293)
T ss_dssp             HHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC---------BCSCCCCCGGGCCHHHHTT------CC
T ss_pred             hhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc---------cccccCCCCcccCHHHHcC------CC
Confidence            457789999999999999975543 3469999999985543222         2235678999999999853      56


Q ss_pred             CCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        200 YDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       200 ~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ++.++||||+||++|+|++|..||.+.
T Consensus       193 ~~~~~DiwSlGvilyell~g~~Pf~~~  219 (293)
T d1jksa_         193 LGLEADMWSIGVITYILLSGASPFLGD  219 (293)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCcccchhhhHHHHHHHcCCCCCCCC
Confidence            889999999999999999999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=7.9e-18  Score=164.13  Aligned_cols=88  Identities=31%  Similarity=0.498  Sum_probs=68.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++..  +.+.+||+|||++......          ...+.+||+.|+|||++..     ...+
T Consensus       125 ~lH~~~iiHrDiKp~NIll~~--~~~~vkl~DFG~a~~~~~~----------~~~~~~GT~~y~aPE~~~~-----~~~~  187 (273)
T d1xwsa_         125 HCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDT----------VYTDFDGTRVYSPPEWIRY-----HRYH  187 (273)
T ss_dssp             HHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTCEECCSS----------CBCCCCSCGGGSCHHHHHH-----SCBC
T ss_pred             HHHHCCCccccCcccceEEec--CCCeEEECccccceecccc----------cccccccCCCcCCHHHHcC-----CCCC
Confidence            457789999999999999953  2356999999998543211          1225679999999998853     1234


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|..||.+
T Consensus       188 ~~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         188 GRSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             CcccccccceeeehhHhhCCCCCCC
Confidence            6779999999999999999999965

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.2e-17  Score=165.07  Aligned_cols=90  Identities=29%  Similarity=0.473  Sum_probs=64.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.........      ...+..||+.|+|||++..      ..+
T Consensus       149 ylH~~~ivHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~------~~~~~~gt~~y~APE~l~~------~~~  213 (299)
T d1ywna1         149 FLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYV------RKGDARLPLKWMAPETIFD------RVY  213 (299)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CGGGCEEECC------CCSCTTSC------CTTSCCCGGGGCCHHHHHH------CCC
T ss_pred             HHHhCCCcCCcCCccceeE---CCCCcEEEccCcchhhcccccccc------ccCceeeCccccchhHhhc------CCC
Confidence            4577899999999999999   455679999999986433221111      1124579999999998863      568


Q ss_pred             CcccchhhhhHHHHHHHhCC-CCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGY-PPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~-~Pf~~  225 (539)
                      +.++|||||||++|+|++|. +||.+
T Consensus       214 ~~~sDiwS~Gvil~ellt~~~~p~~~  239 (299)
T d1ywna1         214 TIQSDVWSFGVLLWEIFSLGASPYPG  239 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CcccceeehHHHHHHHHhCCCCCCCC
Confidence            99999999999999999975 67765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.66  E-value=1.2e-17  Score=163.10  Aligned_cols=92  Identities=34%  Similarity=0.620  Sum_probs=64.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.++++|||++..........     ......+||+.|+|||++.      ...+
T Consensus       126 ~lH~~~iiHrDiKP~NIll~---~~~~~~l~d~~~~~~~~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~------~~~~  191 (277)
T d1o6ya_         126 FSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAIADSGNSV-----TQTAAVIGTAQYLSPEQAR------GDSV  191 (277)
T ss_dssp             HHHHTTEECCCCSGGGEEEE---TTSCEEECCCTTCEECC---------------------TTCCHHHHT------TCCC
T ss_pred             HHHhCCccCccccCcccccC---ccccceeehhhhhhhhccccccc-----cccccccCcccccCHHHHc------CCCC
Confidence            45667999999999999994   45568999999875432221111     1223568999999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|+||.+||.+.
T Consensus       192 ~~~~DiwSlGvilyelltG~~Pf~~~  217 (277)
T d1o6ya_         192 DARSDVYSLGCVLYEVLTGEPPFTGD  217 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcceecccchHHHHHHHhCCCCCCCc
Confidence            99999999999999999999999764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=1.3e-17  Score=164.84  Aligned_cols=94  Identities=26%  Similarity=0.394  Sum_probs=62.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+.........   .......||+.|||||.+..      ..+
T Consensus       143 yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~------~~~  210 (299)
T d1jpaa_         143 YLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTY---TSALGGKIPIRWTAPEAIQY------RKF  210 (299)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTCCEEECCC--------------------------CGGGSCHHHHHS------CCC
T ss_pred             HHhhCCCccCccccceEEE---CCCCcEEECCcccceEccCCCCccee---eecccccCCccccCHHHHhc------CCC
Confidence            4577899999999999999   45677999999998654322211100   01123457899999998753      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |.+||.+.
T Consensus       211 ~~~sDvwS~Gvvl~el~t~g~~Pf~~~  237 (299)
T d1jpaa_         211 TSASDVWSYGIVMWEVMSYGERPYWDM  237 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CcccccccchHHHHHHHhCCCCCCCCC
Confidence            999999999999999998 89999763

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.65  E-value=2.9e-17  Score=160.35  Aligned_cols=94  Identities=40%  Similarity=0.728  Sum_probs=74.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.+....         .....+||+.|++||++..........+
T Consensus       125 ~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~~PE~~~~~~~~~~~~~  192 (277)
T d1phka_         125 ALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGY  192 (277)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCB
T ss_pred             HHHHcCCcccccccceEEE---cCCCCeEEccchheeEccCCC---------ceeeeeccCCCCCHHHhhccccccCCCC
Confidence            4577899999999999999   556679999999986543221         1224579999999998864333334567


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|+.||.+.
T Consensus       193 ~~~~DiwslGvilyeml~g~~Pf~~~  218 (277)
T d1phka_         193 GKEVDMWSTGVIMYTLLAGSPPFWHR  218 (277)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CchheEcccchhhhhhccCCCCCCCC
Confidence            89999999999999999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.3e-17  Score=161.66  Aligned_cols=91  Identities=22%  Similarity=0.301  Sum_probs=63.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++.+........     ......||+.|+|||++..      ..+
T Consensus       125 ~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~~~~~~~~~-----~~~~~~gt~~Y~APE~l~~------~~~  190 (283)
T d1mqba_         125 YLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATY-----TTSGGKIPIRWTAPEAISY------RKF  190 (283)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----------------------CCCGGGSCHHHHHS------CCC
T ss_pred             hccccccccCccccceEEE---CCCCeEEEcccchhhcccCCCccce-----EeccCCCCccccCHHHHcc------CCC
Confidence            4577899999999999999   5567899999999865432211100     1123457899999998853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|||++|..|+..
T Consensus       191 ~~~sDI~S~Gvil~el~t~~~~~~~  215 (283)
T d1mqba_         191 TSASDVWSFGIVMWEVMTYGERPYW  215 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             CCcccccccHHHHHHHHhCCCCccc
Confidence            9999999999999999997666543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.5e-17  Score=163.00  Aligned_cols=92  Identities=28%  Similarity=0.441  Sum_probs=71.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||+++   ..+.+||+|||+++.+........     ......||+.|+|||++..      ..+
T Consensus       124 ylH~~~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~------~~~  189 (285)
T d1u59a_         124 YLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSYYT-----ARSAGKWPLKWYAPECINF------RKF  189 (285)
T ss_dssp             HHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCEECTTCSCEEC-----CCCSSCCCGGGCCHHHHHH------CEE
T ss_pred             HHHhCCeecCcCchhheeec---cCCceeeccchhhhcccccccccc-----cccccccCccccChHHHhC------CCC
Confidence            45777999999999999995   455799999999865433221111     1123468899999998853      458


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |..||.+.
T Consensus       190 ~~ksDVwS~Gv~l~E~lt~G~~Pf~~~  216 (285)
T d1u59a_         190 SSRSDVWSYGVTMWEALSYGQKPYKKM  216 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CccchhhcchHHHHHHHhCCCCCCCCC
Confidence            899999999999999998 89999763

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.6e-17  Score=160.38  Aligned_cols=88  Identities=25%  Similarity=0.373  Sum_probs=68.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.+......       ......|++.|+|||++..      ..+
T Consensus       124 ~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~~~~~~-------~~~~~~gt~~y~APE~~~~------~~~  187 (272)
T d1qpca_         124 FIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEYT-------AREGAKFPIKWTAPEAINY------GTF  187 (272)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSSSCEE-------CCTTCCCCTTTSCHHHHHH------CEE
T ss_pred             HHHhCCcccCccchhheee---ecccceeeccccceEEccCCccc-------cccccCCcccccChHHHhC------CCC
Confidence            3467899999999999999   45677999999998654322211       1123468899999998853      458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFY  224 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~  224 (539)
                      +.++|||||||++|||+||..|+.
T Consensus       188 ~~~sDvwS~Gvvl~ellt~~~~~~  211 (272)
T d1qpca_         188 TIKSDVWSFGILLTEIVTHGRIPY  211 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCC
Confidence            899999999999999999765554

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1e-17  Score=163.65  Aligned_cols=92  Identities=25%  Similarity=0.462  Sum_probs=69.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||+++   ..+.+||+|||+++..........     ......||+.|+|||++..      ..+
T Consensus       122 ylH~~~iiHrDlKp~Nill~---~~~~~kl~DFGla~~~~~~~~~~~-----~~~~~~gt~~y~APE~l~~------~~~  187 (277)
T d1xbba_         122 YLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYK-----AQTHGKWPVKWYAPECINY------YKF  187 (277)
T ss_dssp             HHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECCTTCSEEE-----C----CCCGGGCCHHHHHH------CEE
T ss_pred             hHHhCCcccCCCcchhhccc---ccCcccccchhhhhhccccccccc-----cccccCCCceecCchhhcC------CCC
Confidence            45778999999999999994   456799999999865432221110     1123468999999998853      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||++ |..||.+.
T Consensus       188 ~~~sDiwS~Gv~l~ellt~g~~Pf~~~  214 (277)
T d1xbba_         188 SSKSDVWSFGVLMWEAFSYGQKPYRGM  214 (277)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CchhhhccchhhhhHHhhCCCCCCCCC
Confidence            889999999999999998 89999763

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.7e-17  Score=162.74  Aligned_cols=98  Identities=24%  Similarity=0.300  Sum_probs=69.5

Q ss_pred             cccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCC
Q psy16343        122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD  201 (539)
Q Consensus       122 ~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~  201 (539)
                      .+.++||||||||+|||+   +..+.+||+|||+++...........    .....+||+.|+|||++..........++
T Consensus       124 ~~~~~IvHrDlKp~NILl---~~~~~~Kl~DFGl~~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  196 (303)
T d1vjya_         124 QGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDI----APNHRVGTKRYMAPEVLDDSINMKHFESF  196 (303)
T ss_dssp             TCBCEEECSCCCGGGEEE---CTTSCEEECCCTTCEEEETTTTEECC--------CCSCGGGCCHHHHTTCSCTTCHHHH
T ss_pred             ccCCCeeccccCccceEE---cCCCCeEEEecCccccccCCCcceec----cccceecccCcCChhhccccccccCCCcC
Confidence            345699999999999999   45568999999998654322211110    12246799999999987543221122366


Q ss_pred             cccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        202 KRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       202 ~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++|||||||++|||+||..||...
T Consensus       197 ~k~Di~S~Gvvl~el~tg~~~~~~~  221 (303)
T d1vjya_         197 KRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             cchhhhhhHHHHHHHhhCCCCCCcc
Confidence            7899999999999999999888543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=9.4e-17  Score=161.79  Aligned_cols=93  Identities=32%  Similarity=0.569  Sum_probs=72.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||++...........     .....+|++.|+|||++..     ...+
T Consensus       124 yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a~~~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~-----~~~~  190 (345)
T d1pmea_         124 YIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTG-----FLTEYVATRWYRAPEIMLN-----SKGY  190 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCGGGCBCC-----TTCCCCSCGGGCCGGGTTT-----BCSC
T ss_pred             HHHHCCCcCCCCCcceEEE---CCCCCEEEcccCceeeccCCCccce-----eeccccccceechHHHhhc-----CCCC
Confidence            4577899999999999999   4556799999999854433221111     2335679999999998753     3457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|+.||.+.
T Consensus       191 ~~~~DiwSlG~il~eml~g~~pf~~~  216 (345)
T d1pmea_         191 TKSIDIWSVGCILAEMLSNRPIFPGK  216 (345)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CchhhhhccCceehHHhhCCCCCCCC
Confidence            88999999999999999999999764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=3e-17  Score=161.17  Aligned_cols=89  Identities=24%  Similarity=0.318  Sum_probs=68.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+||+|||+++........       ......|++.|+|||++..      ..|
T Consensus       130 yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~a~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~------~~~  193 (287)
T d1opja_         130 YLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYT-------AHAGAKFPIKWTAPESLAY------NKF  193 (287)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCCTTTCCSSSSE-------EETTEEECGGGCCHHHHHH------CCC
T ss_pred             HHHHCCcccCccccCeEEE---CCCCcEEEccccceeecCCCCce-------eeccccccccccChHHHcC------CCC
Confidence            4577899999999999999   44567999999998654322111       1112357889999998753      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||..
T Consensus       194 ~~k~DiwS~Gv~l~ell~~~~p~~~  218 (287)
T d1opja_         194 SIKSDVWAFGVLLWEIATYGMSPYP  218 (287)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             CchhhhhhHHHHHHHHHhCCCCCCC
Confidence            9999999999999999998777644

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.3e-17  Score=164.32  Aligned_cols=91  Identities=29%  Similarity=0.412  Sum_probs=68.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||+++   ..+.+||+|||+++.........      ......||+.|+|||++..      ..|
T Consensus       126 yLH~~~iiHrDlKp~NIll~---~~~~~kl~DFGla~~~~~~~~~~------~~~~~~gt~~y~APE~l~~------~~~  190 (317)
T d1xkka_         126 YLEDRRLVHRDLAARNVLVK---TPQHVKITDFGLAKLLGAEEKEY------HAEGGKVPIKWMALESILH------RIY  190 (317)
T ss_dssp             HHHHTTCCCSCCCGGGEEEE---ETTEEEECCCSHHHHTTTTCC--------------CCTTTSCHHHHHH------CCC
T ss_pred             HHHHcCcccCcchhhcceeC---CCCCeEeeccccceecccccccc------cccccccCccccChHHHhc------CCC
Confidence            45777999999999999994   45679999999986543222111      1123468999999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |.+||.+.
T Consensus       191 ~~~sDvwS~Gvil~el~t~g~~p~~~~  217 (317)
T d1xkka_         191 THQSDVWSYGVTVWELMTFGSKPYDGI  217 (317)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             ChhhhhhhHHHHHHHHHHCCCCCCCCC
Confidence            999999999999999998 78888663

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.2e-17  Score=159.73  Aligned_cols=90  Identities=30%  Similarity=0.499  Sum_probs=70.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++   +..+.+||+|||+++.......        .....+||+.|+|||++..     ...+
T Consensus       117 yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~~~--------~~~~~~gt~~y~apE~~~~-----~~~~  180 (298)
T d1gz8a_         117 FCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR--------TYTHEVVTLWYRAPEILLG-----CKYY  180 (298)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCCSB--------CTTCCBCCCTTCCHHHHTT-----CSSC
T ss_pred             HhhcCCEEccccCchheee---cccCcceeccCCcceeccCCcc--------cceeecccceeeehhhhcc-----ccCC
Confidence            4567799999999999999   4556799999998854322211        1224579999999998753     2346


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|+.||.+.
T Consensus       181 ~~~~DiwSlGvily~m~~G~~Pf~~~  206 (298)
T d1gz8a_         181 STAVDIWSLGCIFAEMVTRRALFPGD  206 (298)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CccccccccchhhhHHhhCCCCCCCC
Confidence            78999999999999999999999764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.7e-17  Score=157.70  Aligned_cols=88  Identities=22%  Similarity=0.365  Sum_probs=60.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++........       ......||+.|+|||++.      ...|
T Consensus       116 ~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~~~-------~~~~~~gt~~y~aPE~l~------~~~~  179 (263)
T d1sm2a_         116 YLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYT-------SSTGTKFPVKWASPEVFS------FSRY  179 (263)
T ss_dssp             HHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC-------------------------CTTSCCHHHHT------TCCC
T ss_pred             hhhccceeecccchhheee---cCCCCeEecccchheeccCCCce-------eecceecCcccCChHHhc------CCCC
Confidence            4467799999999999999   45567999999998644322111       112346899999999985      3568


Q ss_pred             CcccchhhhhHHHHHHHhCC-CCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGY-PPFY  224 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~-~Pf~  224 (539)
                      +.++|||||||++|||+|+. +||.
T Consensus       180 ~~k~DVwS~Gvil~el~t~~~~~~~  204 (263)
T d1sm2a_         180 SSKSDVWSFGVLMWEVFSEGKIPYE  204 (263)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             CchhhhcchHHHHHHHHHCCCCCCC
Confidence            99999999999999999964 4443

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.1e-16  Score=159.17  Aligned_cols=94  Identities=24%  Similarity=0.415  Sum_probs=71.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++..........    ....+.+||+.|+|||++..     ...+
T Consensus       132 ~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~gT~~Y~aPE~~~~-----~~~~  199 (318)
T d3blha1         132 YIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQP----NRYTNRVVTLWYRPPELLLG-----ERDY  199 (318)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECCC-----C----CCCCSCCSCGGGCCHHHHTT-----CSSC
T ss_pred             HhccCCEEecCcCchheee---cCCCcEEeeecceeeeccccccccc----ccccceecCHHHhhHHHHcC-----CCCC
Confidence            4567799999999999999   4556799999999854432211110    02234579999999998753     2458


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|++||.+.
T Consensus       200 ~~k~DiwSlGvil~el~~g~~pf~~~  225 (318)
T d3blha1         200 GPPIDLWGAGCIMAEMWTRSPIMQGN  225 (318)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcHHHcccCCceeeeHhhCCCCCCCC
Confidence            89999999999999999999999764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.8e-16  Score=160.05  Aligned_cols=90  Identities=33%  Similarity=0.520  Sum_probs=71.3

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+|||+..+  ...+||+|||++.......         ...+.+|++.|+|||.+..     ...+
T Consensus       137 yLH~~~IiHrDiKp~NILl~~~--~~~~kl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-----~~~~  200 (350)
T d1q5ka_         137 YIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGE---------PNVSYICSRYYRAPELIFG-----ATDY  200 (350)
T ss_dssp             HHHTTTEECCCCCGGGEEECTT--TCCEEECCCTTCEECCTTS---------CCCSCCSCTTSCCHHHHTT-----CSSC
T ss_pred             HHHhcCCcccCCCcceEEEecC--CCceeEecccchhhccCCc---------ccccccccccccChHHhhc-----ccCC
Confidence            4577899999999999999532  2469999999975433221         2235679999999998742     2468


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       201 ~~~~DIwSlG~il~el~~g~~pf~~~  226 (350)
T d1q5ka_         201 TSSIDVWSAGCVLAELLLGQPIFPGD  226 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred             CcceeecccceEEEehhhCCCCCCCC
Confidence            99999999999999999999999764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.4e-17  Score=158.10  Aligned_cols=90  Identities=31%  Similarity=0.465  Sum_probs=61.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||+++........       ......||+.|+|||++..      ..+
T Consensus       123 ylH~~~iiHrDlKp~NIll~---~~~~~Kl~DfG~a~~~~~~~~~-------~~~~~~gt~~y~apE~l~~------~~~  186 (273)
T d1mp8a_         123 YLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYY-------KASKGKLPIKWMAPESINF------RRF  186 (273)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---ETTEEEECC--------------------------CCGGGCCHHHHHH------CCC
T ss_pred             hhcccCeeccccchhheeec---CCCcEEEccchhheeccCCcce-------eccceecCcccchhhHhcc------CCC
Confidence            45677999999999999994   4456999999998654322111       1123467899999999853      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |.+||.+.
T Consensus       187 ~~~~DiwSlGvil~e~lt~g~~P~~~~  213 (273)
T d1mp8a_         187 TSASDVWMFGVCMWEILMHGVKPFQGV  213 (273)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCccccccchHHHHHHHhcCCCCCCCC
Confidence            899999999999999998 89999764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.8e-16  Score=158.05  Aligned_cols=93  Identities=40%  Similarity=0.552  Sum_probs=70.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||+++   ..+.+||+|||+++.+......       ...+..|++.|++||.+..    ....+
T Consensus       144 ~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~a~~~~~~~~~-------~~~~~~g~~~~~~pe~~~~----~~~~~  209 (322)
T d1vzoa_         144 HLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETE-------RAYDFCGTIEYMAPDIVRG----GDSGH  209 (322)
T ss_dssp             HHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEEEECCGGGGG-------GGCGGGSCCTTCCHHHHTT----CC---
T ss_pred             HhhcCCEEeccCCccceeec---CCCCEEEeeccchhhhcccccc-------cccccccccccchhHHhhc----CCcCC
Confidence            34678999999999999994   4567999999998544322111       1235678999999998853    12357


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGNC  227 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~~  227 (539)
                      +.++||||+||++|+|++|..||.+..
T Consensus       210 ~~ksDIWSlG~iLyelltG~~PF~~~~  236 (322)
T d1vzoa_         210 DKAVDWWSLGVLMYELLTGASPFTVDG  236 (322)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.9e-16  Score=151.52  Aligned_cols=90  Identities=23%  Similarity=0.403  Sum_probs=71.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++.+......       ......||+.|+|||++..      ..+
T Consensus       115 ~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~  178 (258)
T d1k2pa_         115 YLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYT-------SSVGSKFPVRWSPPEVLMY------SKF  178 (258)
T ss_dssp             HHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSSCC-------CCCCSCCCGGGCCHHHHHH------CCC
T ss_pred             HHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCCce-------eecccCCCCCcCCcHHhcC------CCC
Confidence            4467899999999999999   45567999999998644322211       1223568999999999863      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |+.||.+.
T Consensus       179 ~~ksDiwS~G~~l~el~t~g~~Pf~~~  205 (258)
T d1k2pa_         179 SSKSDIWAFGVLMWEIYSLGKMPYERF  205 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             CcceeecccchhhHhHHhcCCCCCCCC
Confidence            899999999999999998 89999764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.59  E-value=9e-17  Score=158.79  Aligned_cols=90  Identities=27%  Similarity=0.438  Sum_probs=68.6

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++   +..+.+||+|||+++.+.......      ...+..|++.|+|||++..      ..|
T Consensus       155 ylH~~~ivHrDlKp~NILl---d~~~~~Kl~DFGls~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~  219 (301)
T d1lufa_         155 YLSERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIYSADYYK------ADGNDAIPIRWMPPESIFY------NRY  219 (301)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----------CCBCGGGCCHHHHHH------CCC
T ss_pred             hcccCCeEeeEEcccceEE---CCCCcEEEccchhheeccCCcccc------ccCCCCcCcCcCCHHHHcc------CCC
Confidence            4577899999999999999   455779999999985433221111      1124568899999999863      568


Q ss_pred             CcccchhhhhHHHHHHHhCC-CCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGY-PPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~-~Pf~~  225 (539)
                      +.++|||||||++|||++|. +||.+
T Consensus       220 t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         220 TTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ChhhhhccchhhHHHHHccCCCCCCC
Confidence            99999999999999999996 56765

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.4e-16  Score=158.73  Aligned_cols=90  Identities=30%  Similarity=0.542  Sum_probs=71.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++... ....+||+|||+++......         ...+..+++.|+|||....      ..|
T Consensus       117 yLH~~~iiHrDlKp~NIll~~~-~~~~ikl~DFG~~~~~~~~~---------~~~~~~~t~~y~ape~~~~------~~~  180 (321)
T d1tkia_         117 FLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGD---------NFRLLFTAPEYYAPEVHQH------DVV  180 (321)
T ss_dssp             HHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTC---------EEEEEESCGGGSCHHHHTT------CEE
T ss_pred             HHHHcCCCcccccccceeecCC-CceEEEEcccchhhccccCC---------cccccccccccccchhccC------CCC
Confidence            4567799999999999999543 33579999999975432211         2234578999999998753      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|..||.+.
T Consensus       181 ~~~~DiWSlGvily~ll~G~~Pf~~~  206 (321)
T d1tkia_         181 STATDMWSLGTLVYVLLSGINPFLAE  206 (321)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             CchhhcccHHHHHHHHHhCCCCCCCC
Confidence            89999999999999999999999764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.1e-16  Score=155.81  Aligned_cols=92  Identities=26%  Similarity=0.411  Sum_probs=68.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++..   ...+||+|||+++..........     ......|+..|+|||++..      ..+
T Consensus       126 ylH~~~iiHrDikp~NIll~~---~~~vkl~DfGl~~~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~------~~~  191 (273)
T d1u46a_         126 YLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALPQNDDHYV-----MQEHRKVPFAWCAPESLKT------RTF  191 (273)
T ss_dssp             HHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEECCC-CCEEE-----C-----CCGGGCCHHHHHH------CEE
T ss_pred             HhhhCCEeeeeecHHHhcccc---ccceeeccchhhhhcccCCCcce-----ecCccccCcccCCHHHHhC------CCC
Confidence            457789999999999999954   45799999999865432221110     1113457789999998863      457


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |..||.+.
T Consensus       192 ~~~~Di~S~Gvil~emlt~G~~Pf~~~  218 (273)
T d1u46a_         192 SHASDTWMFGVTLWEMFTYGQEPWIGL  218 (273)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CcchhhhhhHHHHHHHHhCCCCCCCCc
Confidence            889999999999999998 89999763

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.7e-16  Score=155.97  Aligned_cols=87  Identities=28%  Similarity=0.443  Sum_probs=70.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +..+.+|++|||+++....           .....+||+.|+|||++..     ...+
T Consensus       136 ~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~  196 (346)
T d1cm8a_         136 YIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS-----------EMTGYVVTRWYRAPEVILN-----WMRY  196 (346)
T ss_dssp             HHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCS-----------SCCSSCSCGGGCCTHHHHT-----TTCC
T ss_pred             HHHhCCCcccccCcchhhc---ccccccccccccceeccCC-----------ccccccccccccCHHHHcC-----CCCC
Confidence            4577899999999999999   5566799999999854321           1234679999999998753     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++||||+||++|+|++|.+||.+.
T Consensus       197 ~~~~DiwSlGvil~ell~g~~pf~~~  222 (346)
T d1cm8a_         197 TQTVDIWSVGCIMAEMITGKTLFKGS  222 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CccchhhcchHHHHHHHHCcCCCCCC
Confidence            88999999999999999999999764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.57  E-value=2.4e-16  Score=154.43  Aligned_cols=90  Identities=27%  Similarity=0.526  Sum_probs=67.7

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+||++   +..+.+||+|||++........        .....++++.|++||.+..     ...+
T Consensus       115 ~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~~--------~~~~~~~~~~y~~pE~~~~-----~~~~  178 (286)
T d1ob3a_         115 YCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVR--------KYTHEIVTLWYRAPDVLMG-----SKKY  178 (286)
T ss_dssp             HHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC-----------------CCCTTCCHHHHTT-----CCSC
T ss_pred             HhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCcc--------ccceecccchhhhHHHHhC-----CCCC
Confidence            4566799999999999999   4456799999998754322111        1123468899999998753     2457


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|+.||.+.
T Consensus       179 ~~~~DiwslGv~l~el~~G~~pf~~~  204 (286)
T d1ob3a_         179 STTIDIWSVGCIFAEMVNGTPLFPGV  204 (286)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcceeehhcCcHHHHHHHCCCCCCCC
Confidence            89999999999999999999999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.9e-16  Score=153.78  Aligned_cols=89  Identities=25%  Similarity=0.295  Sum_probs=64.4

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+||+|||+++........       ......||+.|+|||++..      ..+
T Consensus       128 ~LH~~~ivH~DlKp~NIll---~~~~~~kl~DfGla~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~  191 (285)
T d1fmka3         128 YVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYT-------ARQGAKFPIKWTAPEAALY------GRF  191 (285)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC---------------------CCGGGSCHHHHHH------CCC
T ss_pred             HHhhhheecccccceEEEE---CCCCcEEEcccchhhhccCCCce-------eeccccccccccChHHHhC------CCC
Confidence            4577799999999999999   44567999999998644322111       1123468999999998853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|+|++|..||..
T Consensus       192 ~~ksDI~S~Giil~el~t~~~p~~~  216 (285)
T d1fmka3         192 TIKSDVWSFGILLTELTTKGRVPYP  216 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             CcHHhhhcchHHHHHHHhCCCCCCC
Confidence            8999999999999999997666544

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.2e-16  Score=153.08  Aligned_cols=91  Identities=27%  Similarity=0.456  Sum_probs=70.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+||||||||+|||+   +..+.+||+|||+++.........      ......|++.|+|||.+..      ..|
T Consensus       150 ylH~~~ivHrDiKp~NiLl---~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~l~~------~~y  214 (299)
T d1fgka_         150 YLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYK------KTTNGRLPVKWMAPEALFD------RIY  214 (299)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CTTCCEEECSTTCCCCGGGCCTTC------CCTTSCCGGGGSCHHHHHH------CCC
T ss_pred             HhhhCCEEeeeecccceee---cCCCCeEeccchhhcccccccccc------ccccCCCChhhhhhhHhcC------CCC
Confidence            4577899999999999999   445679999999986543322111      1234568899999998853      568


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|+|++ |.+||.+.
T Consensus       215 ~~k~DiwS~Gvvl~ell~~g~~p~~~~  241 (299)
T d1fgka_         215 THQSDVWSFGVLLWEIFTLGGSPYPGV  241 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CchhhhHHhHHHHHHhccCCCCCCCCC
Confidence            999999999999999998 68888653

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.55  E-value=1.5e-15  Score=151.67  Aligned_cols=106  Identities=25%  Similarity=0.381  Sum_probs=80.7

Q ss_pred             CCCeeeeeeeeccccc------------------------ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCc
Q psy16343        105 HPNIIQLLEYYEDDEN------------------------HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK  160 (539)
Q Consensus       105 HpnIv~l~~~~~~~~~------------------------~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~  160 (539)
                      +.+++-+++++..+..                        +.|.++||||||||+|||+...+  ..+||+|||++....
T Consensus       104 ~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~--~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         104 SRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH--RKLRLIDWGLAEFYH  181 (328)
T ss_dssp             TCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT--TEEEECCGGGCEECC
T ss_pred             CCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC--Ceeeecccccceecc
Confidence            4456667788765542                        45778999999999999996432  358999999985433


Q ss_pred             CCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       161 ~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      ...         .....++|+.|+|||.+..     ...++.++|+||+||++|+|++|..||...
T Consensus       182 ~~~---------~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~~l~e~~~g~~pf~~~  233 (328)
T d3bqca1         182 PGQ---------EYNVRVASRYFKGPELLVD-----YQMYDYSLDMWSLGCMLASMIFRKEPFFHG  233 (328)
T ss_dssp             TTC---------CCCSCCSCGGGCCHHHHTT-----CCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             CCC---------cccccccCccccCcccccC-----CCCCCcccchhhhhhhhHHhccCCCCCCCC
Confidence            221         1234578999999998753     245789999999999999999999999764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.1e-15  Score=151.54  Aligned_cols=92  Identities=25%  Similarity=0.372  Sum_probs=71.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+|||+   +..+.+||+|||+++...........    ......||+.|+|||.+..      ..+
T Consensus       145 ~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~------~~~  211 (311)
T d1r0pa_         145 FLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVH----NKTGAKLPVKWMALESLQT------QKF  211 (311)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTTTTCCCTT----CTTCSSCCGGGSCHHHHHH------CCC
T ss_pred             hhcccCcccCCccHHhEeE---CCCCCEEEecccchhhccccccccce----ecccccccccccChHHHhc------CCC
Confidence            3467899999999999999   55677999999998654332211110    1223568999999998753      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++|||||||++|||++|..||..
T Consensus       212 ~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         212 TTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             CChhHhhhhHHHHHHHHHCCCCCCC
Confidence            9999999999999999998888765

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=6e-15  Score=144.47  Aligned_cols=89  Identities=25%  Similarity=0.436  Sum_probs=68.2

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||++.   ..+.+||+|||++.........        .....+++.|+|||++..     ...+
T Consensus       116 ~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a~~~~~~~~~--------~~~~~~~~~~~~pe~~~~-----~~~~  179 (292)
T d1unla_         116 FCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARAFGIPVRC--------YSAEVVTLWYRPPDVLFG-----AKLY  179 (292)
T ss_dssp             HHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEECCSCCSC--------CCSCCSCGGGCCHHHHTT-----CSCC
T ss_pred             HhhcCCEeeecccCcccccc---cCCceeeeecchhhcccCCCcc--------ceeeccccchhhhhHhcc-----CCCC
Confidence            45677999999999999994   4567999999998654322211        123456788999998753     2346


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~  225 (539)
                      +.++||||+||++|+|++|+.||..
T Consensus       180 ~~~~DiwSlG~il~ell~g~~p~~~  204 (292)
T d1unla_         180 STSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             CTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             CchhhccccchHHHHHhhCCCCCCC
Confidence            8899999999999999999999754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.9e-15  Score=150.70  Aligned_cols=87  Identities=31%  Similarity=0.469  Sum_probs=66.9

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++   +..+.+|++|||++.....           ...+..|++.|+|||+...     ...+
T Consensus       136 ~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~a~~~~~-----------~~~~~~g~~~y~apE~~~~-----~~~~  196 (348)
T d2gfsa1         136 YIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDD-----------EMTGYVATRWYRAPEIMLN-----WMHY  196 (348)
T ss_dssp             HHHHTTCCCCCCCGGGEEE---CTTCCEEECCC----CCTG-----------GGSSSCHHHHTSCHHHHTT-----CSCC
T ss_pred             HHHhCCCcccccCCccccc---cccccccccccchhcccCc-----------ccccccccccccCchhhcC-----CccC
Confidence            4577899999999999999   4556799999998743221           2235678999999998643     2356


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|.+||.+.
T Consensus       197 ~~~~DiwSlGv~l~~ll~g~~pF~~~  222 (348)
T d2gfsa1         197 NQTVDIWSVGCIMAELLTGRTLFPGT  222 (348)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Confidence            88999999999999999999999874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.8e-15  Score=148.62  Aligned_cols=90  Identities=30%  Similarity=0.468  Sum_probs=68.1

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+||+++   ..+.+|++|||+++.........      ......||+.|+|||++..      ..+
T Consensus       160 ~LH~~~ivHrDLKp~NIl~~---~~~~~ki~DfG~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~  224 (311)
T d1t46a_         160 FLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYV------VKGNARLPVKWMAPESIFN------CVY  224 (311)
T ss_dssp             HHHHTTCCCSCCSGGGEEEE---TTTEEEECCCGGGSCTTSCTTSE------ECSSSEECGGGCCHHHHHH------CCC
T ss_pred             HHHhCCeeeccccccccccc---ccCcccccccchheeccCCCcce------EeeecccChHHcCHHHhcC------CCC
Confidence            45778999999999999994   45679999999986543221111      1123578999999998853      568


Q ss_pred             CcccchhhhhHHHHHHHhC-CCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCG-YPPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG-~~Pf~~  225 (539)
                      +.++|||||||++|+|+|+ .+||.+
T Consensus       225 ~~~~DIwS~G~~l~ellt~g~p~~~~  250 (311)
T d1t46a_         225 TFESDVWSYGIFLWELFSLGSSPYPG  250 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             CCcccccchHHHHHHHHhCCCCCCCC
Confidence            9999999999999999995 555544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.4e-15  Score=144.24  Aligned_cols=86  Identities=23%  Similarity=0.419  Sum_probs=63.8

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|..+|+||||||+||++   +..+.+||+|||+++.....           ..+..+++.|+|||++..      ..+
T Consensus       118 ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~~~-----------~~~~~~~~~y~aPE~l~~------~~~  177 (262)
T d1byga_         118 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASST-----------QDTGKLPVKWTAPEALRE------KKF  177 (262)
T ss_dssp             HHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----------------------CCTTTSCHHHHHH------CCC
T ss_pred             ccccCceeccccchHhhee---cCCCCEeecccccceecCCC-----------CccccccccCCChHHHhC------CCC
Confidence            4577799999999999999   45567999999987543211           113457889999998853      468


Q ss_pred             CcccchhhhhHHHHHHHh-CCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLC-GYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~llt-G~~Pf~~~  226 (539)
                      +.++|||||||++|||+| |.+||.+.
T Consensus       178 t~~sDIwSfG~il~el~t~~~~p~~~~  204 (262)
T d1byga_         178 STKSDVWSFGILLWEIYSFGRVPYPRI  204 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             ChHHHHHhHHHHHHHHHHCCCCCCCCC
Confidence            999999999999999998 68887653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=3.6e-15  Score=147.62  Aligned_cols=90  Identities=23%  Similarity=0.359  Sum_probs=69.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+|||+   +....+||+|||+++.........      ......|++.|+|||.+..      ..+
T Consensus       148 ~LH~~~ivHrDlk~~NiLl---d~~~~~Kl~DFGla~~~~~~~~~~------~~~~~~~t~~y~aPe~l~~------~~~  212 (308)
T d1p4oa_         148 YLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMSPESLKD------GVF  212 (308)
T ss_dssp             HHHHTTCBCSCCSGGGEEE---CTTCCEEECCTTCCCGGGGGGCEE------GGGSSEECGGGCCHHHHHH------CCC
T ss_pred             HHhhCCeeeceEcCCceee---cCCceEEEeecccceeccCCccee------eccceecccccCCHHHHcc------CCC
Confidence            4567799999999999999   556789999999985433221110      1123468999999998853      568


Q ss_pred             CcccchhhhhHHHHHHHhCC-CCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGY-PPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~-~Pf~~  225 (539)
                      +.++|||||||++|+|+||. +||.+
T Consensus       213 ~~~~Dv~S~G~il~El~t~~~~p~~~  238 (308)
T d1p4oa_         213 TTYSDVWSFGVVLWEIATLAEQPYQG  238 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             CcccccccHHHHHHHHHhCCCCCCCC
Confidence            88999999999999999985 66654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=6.4e-15  Score=148.71  Aligned_cols=88  Identities=30%  Similarity=0.480  Sum_probs=64.5

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++|+||||||+||++.   ..+.++++|||+++......         .....++|+.|+|||++..      ..+
T Consensus       134 ~LH~~giiHrDlKP~Nil~~---~~~~~kl~df~~~~~~~~~~---------~~~~~~~t~~y~aPE~l~~------~~~  195 (355)
T d2b1pa1         134 HLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLARTAGTSF---------MMTPYVVTRYYRAPEVILG------MGY  195 (355)
T ss_dssp             HHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC------------------------CCTTCCHHHHTT------CCC
T ss_pred             HhhhcccccccCCccccccc---cccceeeechhhhhcccccc---------ccccccccccccChhhhcC------CCC
Confidence            45778999999999999994   45669999999875432211         1124578999999999853      568


Q ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      +.++|+||+||++|+|++|++||.+.
T Consensus       196 ~~~~DiwSlG~~l~ell~g~~pF~~~  221 (355)
T d2b1pa1         196 KENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCcccccccchHHHHhhCCCCCCCC
Confidence            89999999999999999999999764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.5e-15  Score=147.78  Aligned_cols=87  Identities=30%  Similarity=0.440  Sum_probs=66.0

Q ss_pred             ccccCCeeeecCCCCCeeccCCCCCCCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCCCC
Q psy16343        121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY  200 (539)
Q Consensus       121 ~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~~~  200 (539)
                      +.|.++||||||||+|||+   +....+||+|||+++......         ......||..|+|||.+..      ..+
T Consensus       142 ~lH~~~iiHrDlkp~NIL~---~~~~~~kl~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~l~~------~~~  203 (309)
T d1fvra_         142 YLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNY------SVY  203 (309)
T ss_dssp             HHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEESSCEEC---------CC----CCTTTCCHHHHHH------CEE
T ss_pred             hhhcCCccccccccceEEE---cCCCceEEccccccccccccc---------cccceecCCcccchHHhcc------CCC
Confidence            4577899999999999999   445679999999985432211         1123468899999998853      468


Q ss_pred             CcccchhhhhHHHHHHHhCC-CCCCC
Q psy16343        201 DKRCDLWSLGVVVYILLCGY-PPFYG  225 (539)
Q Consensus       201 ~~~~Dvws~Gvil~~lltG~-~Pf~~  225 (539)
                      +.++|||||||++|+|++|. +||.+
T Consensus       204 ~~~sDvwSfGvil~ell~~~~~p~~~  229 (309)
T d1fvra_         204 TTNSDVWSYGVLLWEIVSLGGTPYCG  229 (309)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CccceeehhHHHHHHHHhcCCCCCCC
Confidence            89999999999999999976 56654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=3.4e-14  Score=143.40  Aligned_cols=87  Identities=23%  Similarity=0.388  Sum_probs=66.2

Q ss_pred             cc-CCeeeecCCCCCeeccCCCCC---CCeEEEeccccccCcCCCCCCCCCCCCCccCCCCCCCcccccccccccCCCCC
Q psy16343        123 RH-KRIAHRDLKPENILCVHPDQL---SPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS  198 (539)
Q Consensus       123 ~~-~~IiHrDLK~enill~~~~~~---~~ikl~Dfgl~~~~~~~~~~~~~~~~~~l~~~~gt~~y~aPE~~~~~~~~~~~  198 (539)
                      |+ .+|+||||||+|||+...+..   ..++++|||.+.....           .....+||+.|+|||++..      .
T Consensus       142 h~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~-----------~~~~~~gt~~y~aPE~~~~------~  204 (362)
T d1q8ya_         142 HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE-----------HYTNSIQTREYRSPEVLLG------A  204 (362)
T ss_dssp             HHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB-----------CCCSCCSCGGGCCHHHHHT------C
T ss_pred             hhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc-----------ccccccccccccChhhccc------c
Confidence            44 689999999999999643322   3489999998743221           1124579999999998753      5


Q ss_pred             CCCcccchhhhhHHHHHHHhCCCCCCCC
Q psy16343        199 GYDKRCDLWSLGVVVYILLCGYPPFYGN  226 (539)
Q Consensus       199 ~~~~~~Dvws~Gvil~~lltG~~Pf~~~  226 (539)
                      .++.++|+||+||++++|++|+.||...
T Consensus       205 ~~~~~~DiwSlG~il~el~~g~~pF~~~  232 (362)
T d1q8ya_         205 PWGCGADIWSTACLIFELITGDFLFEPD  232 (362)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             CCCccccccchHHHHHHHHHCCCCCCCC
Confidence            6889999999999999999999999764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.42  E-value=1.9e-05  Score=70.57  Aligned_cols=100  Identities=19%  Similarity=0.241  Sum_probs=71.3

Q ss_pred             CceeceeCceEEEEEEEccCCcEEEEEEeccCCC-----C-------------CHHHHHHHHHHHHhhcCCCCeeeeeee
Q psy16343         53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPG-----H-------------SRSRVFKEVETFHHCQGHPNIIQLLEY  114 (539)
Q Consensus        53 ~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~k~~~-----~-------------~~~~~~~Ei~~l~~~~~HpnIv~l~~~  114 (539)
                      ++.||+|+||.||+|++. +|+.||||+++....     .             ......+|...+.++ .|++++..+++
T Consensus         5 g~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~~~~   82 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCEEEE
T ss_pred             CCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceEEEe
Confidence            678999999999999874 789999998742100     0             012234677888886 48898887644


Q ss_pred             ec---------ccc--------------------cccccCCeeeecCCCCCeeccCCCCCCCeEEEecccccc
Q psy16343        115 YE---------DDE--------------------NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG  158 (539)
Q Consensus       115 ~~---------~~~--------------------~~~~~~~IiHrDLK~enill~~~~~~~~ikl~Dfgl~~~  158 (539)
                      ..         ...                    .+.|..+|+||||||+||++..    ..++|+|||++..
T Consensus        83 ~~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~----~~~~liDFG~a~~  151 (191)
T d1zara2          83 EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE----EGIWIIDFPQSVE  151 (191)
T ss_dssp             ETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET----TEEEECCCTTCEE
T ss_pred             cCCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC----CCEEEEECCCccc
Confidence            21         111                    1346789999999999999963    2389999998743

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=86.47  E-value=0.078  Score=49.72  Aligned_cols=31  Identities=26%  Similarity=0.429  Sum_probs=24.1

Q ss_pred             hhCCCCCCCCCCceeecCCCCCCCceeccCCCcc
Q psy16343        251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS  284 (539)
Q Consensus       251 ~~gIvHRDlKpeNiL~~~~~~~~~ikl~DFGla~  284 (539)
                      ..||||.|+.+.|+|+..+   ...-|+||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~---~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGD---ELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETT---EEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccc---cceeEecccccc
Confidence            4689999999999999532   224689999753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.40  E-value=0.53  Score=42.11  Aligned_cols=45  Identities=18%  Similarity=0.065  Sum_probs=28.9

Q ss_pred             eCceEEEEEEEccCCcEEEEEEeccCCCCCHHHHHHHHHHHHhhcCC
Q psy16343         59 GAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH  105 (539)
Q Consensus        59 G~fG~V~~~~~~~t~~~vAvK~i~k~~~~~~~~~~~Ei~~l~~~~~H  105 (539)
                      ++.+.||+..  ..+..+.+|+...........+.+|...+..+..+
T Consensus        25 ~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~   69 (263)
T d1j7la_          25 MSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK   69 (263)
T ss_dssp             CSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTT
T ss_pred             CCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhcc
Confidence            3346888764  45666888987644333344567888888766544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=86.06  E-value=0.73  Score=44.37  Aligned_cols=53  Identities=11%  Similarity=0.007  Sum_probs=32.8

Q ss_pred             cCceeceeCceEEEEEEEccCCcEEEEEEec----cCC---CCCHHHHHHHHHHHHhhcC
Q psy16343         52 KGEILGKGAYASVQTCVNILTELEYAVKIID----KLP---GHSRSRVFKEVETFHHCQG  104 (539)
Q Consensus        52 ~~~~LG~G~fG~V~~~~~~~t~~~vAvK~i~----k~~---~~~~~~~~~Ei~~l~~~~~  104 (539)
                      .-+.||.|....||++....+++.|.||.-.    ...   .....+...|.+.|..+..
T Consensus        30 ~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~   89 (392)
T d2pula1          30 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGE   89 (392)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHT
T ss_pred             eEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhh
Confidence            3456899999999999877778889999642    111   1133456678888876543