Diaphorina citri psyllid: psy16398

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
MAGQTINDRLLAAKHSLAGQGLAKAVCKATTEELIGPKKKHLDYLLHCTNEANVSIPDLATLLIERTQNSSSVVVFKALITIHHLMCYGNERFTQYLASSNCSLQLGNFLDKSGIHGYDMTPFIHRYSRYINEKSLSYRTVAFDFCKVKRGKEDGLLRTMPANKLLKSLPVLQSQIDALLEFDCNNSDLRNGVINGAFMLLFRDLIRLFAGYNDSIINLLEKYFDMNKKQCKEALDLYKKFLIRMDRVAEFLKVAENVGIDKGDIPDLTKAPSSLLEALEQHLATLEGKKSAAGTPTQASHRNDVKSGVNSFSTTSSAFSAVSGADLEESLKKQALAEEEAILNQYKAKVSSPTSSMPSNAASTNPFLASPTQPIVDLFGSAPASVEPVQTSKPSDDLLQLGNPFVDDFTGAAAPGSQPPVNNAWTSNGFNMNTTSVQQDSFVSDKAFSSVFGDLDPSKTMPPPSTVPGALGANYRPMGQSMTPFYTDNAFPAQPVGAPRMPMMPSSGGTPLMGSPRQVPSGQPPVASTQLDPFGSL
cccccHHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
**********LAAKHSLAGQGLAKAVCKATTEELIGPKKKHLDYLLHCTNEANVSIPDLATLLIERTQNSSSVVVFKALITIHHLMCYGNERFTQYLASSNCSLQLGNFLDKSGIHGYDMTPFIHRYSRYINEKSLSYRTVAFDFCKVK******LLRTMPANKLLKSLPVLQSQIDALLEFDCNNSDLRNGVINGAFMLLFRDLIRLFAGYNDSIINLLEKYFDMNKKQCKEALDLYKKFLIRMDRVAEFLKVAENVGIDKGDIPDLTKAPSSLLEALEQHLA********************************************************************************************************************************************************************************************************************************************************P****
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MAGQTINDRLLAAKHSLAGQGLAKAVCKATTEELIGPKKKHLDYLLHCTNEANVSIPDLATLLIERTQNSSSVVVFKALITIHHLMCYGNERFTQYLASSNCSLQLGNFLDKSGIHGYDMTPFIHRYSRYINEKSLSYRTVAFDFCKVKRGKEDGLLRTMPANKLLKSLPVLQSQIDALLEFDCNNSDLRNGVINGAFMLLFRDLIRLFAGYNDSIINLLEKYFDMNKKQCKEALDLYKKFLIRMDRVAEFLKVAENVGIDKGDIPDLTKAPSSLLEALEQHLATLEGKKSAAGTPTQASHRNDVKSGVNSFSTTSSAFSAVSGADLEESLKKQALAEEEAILNQYKAKVSSPTSSMPSNAASTNPFLASPTQPIVDLFGSAPASVEPVQTSKPSDDLLQLGNPFVDDFTGAAAPGSQPPVNNAWTSNGFNMNTTSVQQDSFVSDKAFSSVFGDLDPSKTMPPPSTVPGALGANYRPMGQSMTPFYTDNAFPAQPVGAPRMPMMPSSGGTPLMGSPRQVPSGQPPVASTQLDPFGSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Phosphatidylinositol-binding clathrin assembly protein Assembly protein recruiting clathrin and adaptor protein complex 2 (AP2) to cell membranes at sites of coated-pit formation and clathrin-vesicle assembly. May be required to determine the amount of membrane to be recycled, possibly by regulating the size of the clathrin cage. Involved in AP2-dependent clathrin-mediated endocytosis at the neuromuscular junction.confidentO55012

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005905 [CC]coated pitconfidentGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0012505, GO:0044425
GO:0008150 [BP]biological_processconfident
GO:0005545 [MF]1-phosphatidylinositol bindingprobableGO:0043168, GO:0035091, GO:0005543, GO:0008289, GO:0043167, GO:0003674, GO:0005488
GO:0048261 [BP]negative regulation of receptor-mediated endocytosisprobableGO:0032879, GO:0051051, GO:0050794, GO:0051049, GO:0008150, GO:0009987, GO:0051129, GO:0060627, GO:0051128, GO:0065007, GO:0044763, GO:0044699, GO:0048519, GO:0048259, GO:0045806, GO:0030100, GO:0050789, GO:0048523
GO:0008021 [CC]synaptic vesicleprobableGO:0043227, GO:0005737, GO:0043231, GO:0016023, GO:0031410, GO:0044444, GO:0044464, GO:0031982, GO:0005623, GO:0031988, GO:0005575, GO:0043229, GO:0044456, GO:0045202, GO:0044424, GO:0005622, GO:0030135, GO:0043226, GO:0030136
GO:0042734 [CC]presynaptic membraneprobableGO:0097060, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0044456, GO:0045202
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0032050 [MF]clathrin heavy chain bindingprobableGO:0003674, GO:0030276, GO:0005488, GO:0005515
GO:0014069 [CC]postsynaptic densityprobableGO:0030425, GO:0043229, GO:0043228, GO:0044430, GO:0044327, GO:0043226, GO:0005856, GO:0044446, GO:0044309, GO:0097458, GO:0044456, GO:0043005, GO:0042995, GO:0043197, GO:0043232, GO:0044463, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0044422, GO:0045202
GO:0045893 [BP]positive regulation of transcription, DNA-dependentprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0009891, GO:2000112, GO:0019219, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0010556, GO:0048522
GO:0030122 [CC]AP-2 adaptor complexprobableGO:0043227, GO:0030139, GO:0043229, GO:0071944, GO:0030117, GO:0005905, GO:0030131, GO:0030119, GO:0030118, GO:0030135, GO:0043226, GO:0030136, GO:0005737, GO:0005575, GO:0030132, GO:0031982, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0030669, GO:0031988, GO:0044433, GO:0030666, GO:0044459, GO:0048475, GO:0030665, GO:0030659, GO:0030128, GO:0045334, GO:0012505, GO:0012506, GO:0005886, GO:0030120, GO:0030125, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0031090, GO:0044424, GO:0044425, GO:0044422
GO:0045211 [CC]postsynaptic membraneprobableGO:0097060, GO:0044456, GO:0016020, GO:0005575, GO:0045202
GO:0017124 [MF]SH3 domain bindingprobableGO:0003674, GO:0019904, GO:0005515, GO:0005488
GO:0005768 [CC]endosomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0048268 [BP]clathrin coat assemblyprobableGO:0022607, GO:0070271, GO:0043933, GO:0006901, GO:0006900, GO:0061024, GO:0034622, GO:0044699, GO:0071822, GO:0016044, GO:0016043, GO:0065003, GO:0071840, GO:0006461, GO:0006810, GO:0044765, GO:0044763, GO:0051234, GO:0043623, GO:0051179, GO:0006996, GO:0016192, GO:0016050, GO:0044085, GO:0008150, GO:0009987
GO:0016183 [BP]synaptic vesicle coatingprobableGO:0019226, GO:0035637, GO:0051649, GO:0006901, GO:0006900, GO:0061024, GO:0032501, GO:0023052, GO:0051656, GO:0051650, GO:0044699, GO:0048489, GO:0016185, GO:0016044, GO:0071840, GO:0016043, GO:0048488, GO:0097479, GO:0051641, GO:0006810, GO:0050877, GO:0009987, GO:0070142, GO:0044765, GO:0044763, GO:0051648, GO:0007268, GO:0007267, GO:0007154, GO:0051234, GO:0051179, GO:0097480, GO:0003008, GO:0006996, GO:0044700, GO:0006897, GO:0016192, GO:0044707, GO:0016050, GO:0051640, GO:0008150
GO:0042331 [BP]phototaxisprobableGO:0040011, GO:0009628, GO:0042330, GO:0009605, GO:0009314, GO:0050896, GO:0009453, GO:0009416, GO:0008150
GO:0016197 [BP]endosomal transportprobableGO:0009987, GO:0046907, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0007270 [BP]neuron-neuron synaptic transmissionprobableGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007268, GO:0007267, GO:0007154, GO:0044699, GO:0003008
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0031623 [BP]receptor internalizationprobableGO:0051234, GO:0006898, GO:0006897, GO:0016192, GO:0044260, GO:0006810, GO:0044237, GO:0043170, GO:0071704, GO:0044765, GO:0008150, GO:0008152, GO:0009987, GO:0043112, GO:0051179, GO:0044699
GO:0009791 [BP]post-embryonic developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0008150, GO:0007275, GO:0044699
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0000003 [BP]reproductionprobableGO:0008150
GO:0042802 [MF]identical protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0007409 [BP]axonogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0048812, GO:0008150
GO:0048813 [BP]dendrite morphogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0016358, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0008150, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0048812, GO:0044763
GO:0010940 [BP]positive regulation of necrotic cell deathprobableGO:0010939, GO:0050794, GO:0048518, GO:0065007, GO:0010942, GO:0008150, GO:0010941, GO:0050789, GO:0048522
GO:0051223 [BP]regulation of protein transportprobableGO:0070201, GO:0051049, GO:0065007, GO:0008150, GO:0032879, GO:0050789, GO:0032880
GO:0030097 [BP]hemopoiesisprobableGO:0032502, GO:0002376, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0048534, GO:0007275, GO:0044699, GO:0002520

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1HX8, chain A
Confidence level:very confident
Coverage over the Query: 20-286
View the alignment between query and template
View the model in PyMOL