Psyllid ID: psy1646

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MNGEMVDLSRGLKSDGLEEEWDDDIKKSATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEcccccEEEEEEEEcccccccccHHHHHHHHHHHHHcccccEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHccEEEEEccccccHEEEEEEcccccEEEEEEEEcccEEEcccccHHHHHHHHHHHHHccccHHHEEEHHccccccccc
Coil and Loop (DISEMBL)
mngemvdlsrglksdgleeewddDIKKSATegkqtqrdtrgprrhkkEYISSINkgarsatpcttprspreraarpytktsgggsgrgssggdrkvgleDFHFIKVlgkgsfgkvmlaekrgssdevYAVKVLKKdviiqdddvdcTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Flexible Loop (DISEMBL)
mngemvdlsrglksdgleeewdddikksategkqtqrdtrgprrhkkeyissinkgarsatpcttprspreraarpytktsgggsgrgssggdRKVGLEDFHFIKvlgkgsfgkVMLAEkrgssdevyaVKVLkkdviiqdddvDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Low Complexity Region (SEG)
MNGEMVDLSRGLKSDGLEEEWDDDIKKSATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTsgggsgrgssggDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAvkvlkkdviiqdddvdCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Disordered region (IsUnstruct)
***********************************************************************************************VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV****
Disordered Region (DISOPRED)
MNGEMVDLSRGLKS*************************************************************************************DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Disordered Region (DISEMBL)
*********RGLKSDGLEEEWDDDIKKS*******************EYISSIN**************************************DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Disordered Region (DISPRO)
**********************************************************************************************KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNGEMVDLSRGLKSDGLEEEWDDDIKKSATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
P13678	634	Protein kinase C OS=Droso	no	N/A	0.533	0.149	0.744	5e-34
Q16975	743	Calcium-independent prote	N/A	N/A	0.460	0.110	0.819	1e-32
P09216	737	Protein kinase C epsilon	yes	N/A	0.550	0.132	0.696	2e-32
Q02156	737	Protein kinase C epsilon	yes	N/A	0.544	0.131	0.704	2e-32
P16054	737	Protein kinase C epsilon	yes	N/A	0.550	0.132	0.696	2e-32
P10830	736	Protein kinase C epsilon	yes	N/A	0.522	0.126	0.712	1e-31
P34885	707	Protein kinase C-like 1B	yes	N/A	0.533	0.134	0.673	4e-30
P05126	671	Protein kinase C beta typ	no	N/A	0.589	0.156	0.566	5e-29
Q7SY24	670	Protein kinase C beta typ	no	N/A	0.623	0.165	0.586	5e-29
P05771	671	Protein kinase C beta typ	no	N/A	0.573	0.152	0.601	5e-29

>sp|P13678|KPC3_DROME Protein kinase C OS=Drosophila melanogaster GN=Pkc98E PE=2 SV=1

 Score =  143 bits (361), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 3/98 (3%)

Query: 83  GGSGRGSSGGDR--KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ 140
           G  G G++G  R  K  L DF+FIKVLGKGSFGKVMLAEK+G+ DE+YA+KVLKKD IIQ
Sbjct: 283 GSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGT-DEIYAIKVLKKDAIIQ 341

Query: 141 DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DDDVDCTMTEKRILALAA HPFLTALHSCFQT  +  F
Sbjct: 342 DDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFF 379

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q16975|KPC2_APLCA Calcium-independent protein kinase C OS=Aplysia californica GN=PRKC2 PE=1 SV=1

 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 76/83 (91%), Gaps = 1/83 (1%)

Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA 155
           + L DF+FIKVLGKGSFGKVMLAEK+G+ DEVYA+KVLKKDVIIQDDDV+CTMTEKRILA
Sbjct: 398 ISLHDFNFIKVLGKGSFGKVMLAEKKGT-DEVYAIKVLKKDVIIQDDDVECTMTEKRILA 456

Query: 156 LAAKHPFLTALHSCFQTKVKCSF 178
           L+AKHPFLTALHS FQTK +  F
Sbjct: 457 LSAKHPFLTALHSSFQTKERLFF 479

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Aplysia californica (taxid: 6500)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P09216|KPCE_RAT Protein kinase C epsilon type OS=Rattus norvegicus GN=Prkce PE=1 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 81/99 (81%), Gaps = 1/99 (1%)

Query: 80  TSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII 139
            S G +G    G  +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYAVKVLKKDVI+
Sbjct: 387 ASPGENGEVRQGQAKRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVIL 445

Query: 140 QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           QDDDVDCTMTEKRILALA KHP+LT L+ CFQTK +  F
Sbjct: 446 QDDDVDCTMTEKRILALARKHPYLTQLYCCFQTKDRLFF 484

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q02156|KPCE_HUMAN Protein kinase C epsilon type OS=Homo sapiens GN=PRKCE PE=1 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/98 (70%), Positives = 81/98 (82%), Gaps = 1/98 (1%)

Query: 81  SGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ 140
           S G +G    G  +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYAVKVLKKDVI+Q
Sbjct: 388 SPGENGEVRQGQAKRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQ 446

Query: 141 DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DDDVDCTMTEKRILALA KHP+LT L+ CFQTK +  F
Sbjct: 447 DDDVDCTMTEKRILALARKHPYLTQLYCCFQTKDRLFF 484

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. In HeLa cells, contributes to hepatocyte growth factor (HGF)-induced cell migration, and in human corneal epithelial cells, plays a critical role in wound healing after activation by HGF. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). In prostate cancer cells, interacts with and phosphorylates STAT3, which increases DNA-binding and transcriptional activity of STAT3 and seems to be essential for prostate cancer cell invasion. Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P16054|KPCE_MOUSE Protein kinase C epsilon type OS=Mus musculus GN=Prkce PE=1 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 81/99 (81%), Gaps = 1/99 (1%)

Query: 80  TSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII 139
            S G +G    G  +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYAVKVLKKDVI+
Sbjct: 387 ASPGENGEVRPGQAKRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVIL 445

Query: 140 QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           QDDDVDCTMTEKRILALA KHP+LT L+ CFQTK +  F
Sbjct: 446 QDDDVDCTMTEKRILALARKHPYLTQLYCCFQTKDRLFF 484

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P10830|KPCE_RABIT Protein kinase C epsilon type OS=Oryctolagus cuniculus GN=PRKCE PE=2 SV=1

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/94 (71%), Positives = 79/94 (84%), Gaps = 1/94 (1%)

Query: 85  SGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDV 144
           +G    G  +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYAVKVLKKDVI+QDDDV
Sbjct: 391 NGEVRQGQAKRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDV 449

Query: 145 DCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DCTMTEKRILALA KHP+LT L+ CFQTK +  F
Sbjct: 450 DCTMTEKRILALARKHPYLTQLYCCFQTKDRLFF 483

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P34885|KPC1B_CAEEL Protein kinase C-like 1B OS=Caenorhabditis elegans GN=pkc-1 PE=2 SV=2

 Score =  130 bits (327), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 81/101 (80%), Gaps = 6/101 (5%)

Query: 81  SGGGSGRGSS---GGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDV 137
           SG  S R +S   GG   + + DF F+KVLGKGSFGKVMLAE++G+ DEVYA+K+LKKDV
Sbjct: 357 SGTTSSRSASKVPGG--TLSIHDFTFMKVLGKGSFGKVMLAERKGT-DEVYAIKILKKDV 413

Query: 138 IIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           I+QDDDV+CTM EKRIL+LAAKHPFLTALHS FQT  +  F
Sbjct: 414 IVQDDDVECTMCEKRILSLAAKHPFLTALHSSFQTSDRLFF 454

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P05126|KPCB_BOVIN Protein kinase C beta type OS=Bos taurus GN=PRKCB PE=2 SV=4

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 83/113 (73%), Gaps = 8/113 (7%)

Query: 66  PRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD 125
           P++P E       KT+   S   ++G   ++ L DF+F+ VLGKGSFGKVML+E++G+ D
Sbjct: 314 PKTPEE-------KTTNTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT-D 365

Query: 126 EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           E+YAVK+LKKDV+IQDDDV+CTM EKR+LAL  K PFLT LHSCFQT  +  F
Sbjct: 366 ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 418

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase involved in various cellular processes such as regulation of the B-cell receptor (BCR) signalosome, oxidative stress-induced apoptosis, androgen receptor-dependent transcription regulation, insulin signaling and endothelial cells proliferation. Plays a key role in B-cell activation by regulating BCR-induced NF-kappa-B activation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11/CARMA1 at 'Ser-559', 'Ser-644' and 'Ser-652'. Phosphorylation induces CARD11/CARMA1 association with lipid rafts and recruitment of the BCL10-MALT1 complex as well as MAP3K7/TAK1, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. Plays a direct role in the negative feedback regulation of the BCR signaling, by down-modulating BTK function via direct phosphorylation of BTK at 'Ser-180', which results in the alteration of BTK plasma membrane localization and in turn inhibition of BTK activity. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates 'Ser-36' of isoform p66Shc of SHC1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation that prevents demethylation of histone H3 'Lys-4' (H3K4me) by LSD1/KDM1A. In insulin signaling, may function downstream of IRS1 in muscle cells and mediate insulin-dependent DNA synthesis through the RAF1-MAPK/ERK signaling cascade. May participate in the regulation of glucose transport in adipocytes by negatively modulating the insulin-stimulated translocation of the glucose transporter SLC2A4/GLUT4. Under high glucose in pancreatic beta-cells, is probably involved in the inhibition of the insulin gene transcription, via regulation of MYC expression. In endothelial cells, activation of PRKCB induces increased phosphorylation of RB1, increased VEGFA-induced cell proliferation, and inhibits PI3K/AKT-dependent nitric oxide synthase (NOS3/eNOS) regulation by insulin, which causes endothelial dysfunction. Also involved in triglyceride homeostasis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q7SY24|KPCB_DANRE Protein kinase C beta type OS=Danio rerio GN=prkcbb PE=2 SV=1

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 5/116 (4%)

Query: 67  RSPRERAARPYTKTSGGGSGRGS---SGGDR-KVGLEDFHFIKVLGKGSFGKVMLAEKRG 122
           R   ERA    +KT G  S   S   S G+R ++ L DF+F+ VLGKGSFGKVMLAE++G
Sbjct: 301 RQKFERAKIGPSKTDGSSSNAISKFDSNGNRDRMKLSDFNFLMVLGKGSFGKVMLAERKG 360

Query: 123 SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           + DE++A+K+LKKDV+IQDDDV+CTM EKR+LAL+ K PFLT LHSCFQT  +  F
Sbjct: 361 A-DELFAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF 415

Calcium-activated and phospholipid-dependent serine/threonine-protein kinase involved in various processes such as regulation of the B-cell receptor (BCR) signalosome, apoptosis and transcription regulation. Plays a key role in B-cell activation and function by regulating BCR-induced NF-kappa-B activation and B-cell suvival. Required for recruitment and activation of the IKK kinase to lipid rafts and mediates phosphorylation of card11/carma1, leading to activate the NF-kappa-B signaling. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates isoform p66Shc of shc1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (andr)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P05771|KPCB_HUMAN Protein kinase C beta type OS=Homo sapiens GN=PRKCB PE=1 SV=4

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 76  PYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK 135
           P  KT+   S   ++G   ++ L DF+F+ VLGKGSFGKVML+E++G+ DE+YAVK+LKK
Sbjct: 317 PEEKTTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKK 375

Query: 136 DVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DV+IQDDDV+CTM EKR+LAL  K PFLT LHSCFQT  +  F
Sbjct: 376 DVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 418

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase involved in various cellular processes such as regulation of the B-cell receptor (BCR) signalosome, oxidative stress-induced apoptosis, androgen receptor-dependent transcription regulation, insulin signaling and endothelial cells proliferation. Plays a key role in B-cell activation by regulating BCR-induced NF-kappa-B activation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11/CARMA1 at 'Ser-559', 'Ser-644' and 'Ser-652'. Phosphorylation induces CARD11/CARMA1 association with lipid rafts and recruitment of the BCL10-MALT1 complex as well as MAP3K7/TAK1, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. Plays a direct role in the negative feedback regulation of the BCR signaling, by down-modulating BTK function via direct phosphorylation of BTK at 'Ser-180', which results in the alteration of BTK plasma membrane localization and in turn inhibition of BTK activity. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates 'Ser-36' of isoform p66Shc of SHC1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation that prevents demethylation of histone H3 'Lys-4' (H3K4me) by LSD1/KDM1A. In insulin signaling, may function downstream of IRS1 in muscle cells and mediate insulin-dependent DNA synthesis through the RAF1-MAPK/ERK signaling cascade. May participate in the regulation of glucose transport in adipocytes by negatively modulating the insulin-stimulated translocation of the glucose transporter SLC2A4/GLUT4. Under high glucose in pancreatic beta-cells, is probably involved in the inhibition of the insulin gene transcription, via regulation of MYC expression. In endothelial cells, activation of PRKCB induces increased phosphorylation of RB1, increased VEGFA-induced cell proliferation, and inhibits PI3K/AKT-dependent nitric oxide synthase (NOS3/eNOS) regulation by insulin, which causes endothelial dysfunction. Also involved in triglyceride homeostasis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
345492763	736	PREDICTED: calcium-independent protein k	0.842	0.203	0.544	8e-37
321472391	715	hypothetical protein DAPPUDRAFT_301963 [	0.533	0.132	0.762	5e-34
170072840	405	kinase C epsilon type [Culex quinquefasc	0.528	0.232	0.762	3e-33
347968488	808	AGAP002748-PA [Anopheles gambiae str. PE	0.533	0.117	0.757	6e-33
312372041	472	hypothetical protein AND_20683 [Anophele	0.511	0.192	0.778	6e-33
291239731	757	PREDICTED: putative protein kinase C eps	0.584	0.137	0.693	7e-33
157110821	750	protein kinase c [Aedes aegypti] gi|1088	0.511	0.121	0.776	8e-33
195036392	736	GH18675 [Drosophila grimshawi] gi|193893	0.505	0.122	0.784	1e-32
24650924	739	protein C kinase 98E, isoform A [Drosoph	0.533	0.128	0.744	2e-32
125547	634	RecName: Full=Protein kinase C; Short=PK	0.533	0.149	0.744	2e-32

>gi|345492763|ref|XP_003426921.1| PREDICTED: calcium-independent protein kinase C-like isoform 2 [Nasonia vitripennis] gi|345492765|ref|XP_001599367.2| PREDICTED: calcium-independent protein kinase C-like isoform 1 [Nasonia vitripennis]

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 85/156 (54%), Positives = 106/156 (67%), Gaps = 6/156 (3%)

Query: 29  ATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRG 88
           +T G    +  + PR + K  I S N    ++   T+P   ++++++   K    G+  G
Sbjct: 322 STIGISPDKQIKAPRINYKPSIPSSNTPTSTSLNETSPGVNQDQSSQQAQKPKDSGTASG 381

Query: 89  SS---GGD---RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
            S   GG     K+ + DF+FIKVLGKGSFGKVMLAE++G  DEVYAVKVLKKDVIIQDD
Sbjct: 382 ESAISGGQDDIHKISINDFNFIKVLGKGSFGKVMLAERKGHPDEVYAVKVLKKDVIIQDD 441

Query: 143 DVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DV+CTMTEKRIL LAAKHPFLTALHSCFQTK +  F
Sbjct: 442 DVECTMTEKRILVLAAKHPFLTALHSCFQTKERLFF 477

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321472391|gb|EFX83361.1| hypothetical protein DAPPUDRAFT_301963 [Daphnia pulex]

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 77/101 (76%), Positives = 87/101 (86%), Gaps = 6/101 (5%)

Query: 83  GGSGRGSS--GGDR---KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDV 137
           G SG GSS   G R   K+GL++FHFIKVLGKGSFGKVMLAE +G+ DEVYAVKVLKKDV
Sbjct: 357 GSSGLGSSVISGIRDGKKIGLDEFHFIKVLGKGSFGKVMLAELKGT-DEVYAVKVLKKDV 415

Query: 138 IIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           I+QDDDV+CTMTEKRILAL+AKHPFLTALHSC+QTK +  F
Sbjct: 416 ILQDDDVECTMTEKRILALSAKHPFLTALHSCYQTKDRLFF 456

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170072840|ref|XP_001870272.1| kinase C epsilon type [Culex quinquefasciatus] gi|167869314|gb|EDS32697.1| kinase C epsilon type [Culex quinquefasciatus]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 83/97 (85%), Gaps = 3/97 (3%)

Query: 84  GSGRGSSGGDR--KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD 141
           GS R +SGG    K  L DF+FIKVLGKGSFGKVMLAE++G+ +EVYA+KVLKKDVI+QD
Sbjct: 53  GSNRSASGGSSIGKTCLTDFNFIKVLGKGSFGKVMLAERKGT-EEVYAIKVLKKDVILQD 111

Query: 142 DDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DDVDCTMTEKRILALAAKHPFLTALHSCFQT  +  F
Sbjct: 112 DDVDCTMTEKRILALAAKHPFLTALHSCFQTPDRLFF 148

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347968488|ref|XP_312175.5| AGAP002748-PA [Anopheles gambiae str. PEST] gi|333467980|gb|EAA07888.5| AGAP002748-PA [Anopheles gambiae str. PEST]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 82/99 (82%), Gaps = 4/99 (4%)

Query: 80  TSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII 139
           T   G+ R   G   KV L DF+FIKVLGKGSFGKVMLAEK+G+ DEVYA+KVLKKDVI+
Sbjct: 418 TDDDGNARPMPG---KVFLNDFNFIKVLGKGSFGKVMLAEKKGT-DEVYAIKVLKKDVIL 473

Query: 140 QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           QDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  +  F
Sbjct: 474 QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTPDRLFF 512

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312372041|gb|EFR20091.1| hypothetical protein AND_20683 [Anopheles darlingi]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 81/95 (85%), Gaps = 4/95 (4%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
           G  R S+G   K  L DF+FIKVLGKGSFGKVMLAEK+G+ DEVYA+KVLKKDVI+QDDD
Sbjct: 66  GDSRPSAG---KFCLNDFNFIKVLGKGSFGKVMLAEKKGT-DEVYAIKVLKKDVILQDDD 121

Query: 144 VDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           VDCTMTEKRILALAAKHPFLTALHSCFQT  +  F
Sbjct: 122 VDCTMTEKRILALAAKHPFLTALHSCFQTPDRLFF 156

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291239731|ref|XP_002739777.1| PREDICTED: putative protein kinase C epsilon-like [Saccoglossus kowalevskii]

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 86/111 (77%), Gaps = 7/111 (6%)

Query: 68  SPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV 127
           SP +   RP  K+ G    R     +R V L DF+FIKVLGKGSFGKVMLAE +GS DEV
Sbjct: 402 SPGDIGTRP--KSDGSALNRA----ERPVCLNDFNFIKVLGKGSFGKVMLAEFKGS-DEV 454

Query: 128 YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           YAVKVLKKDVIIQDDDV+CTMTEKR+L LA+KHPFLTALHSCFQTK +  F
Sbjct: 455 YAVKVLKKDVIIQDDDVECTMTEKRVLVLASKHPFLTALHSCFQTKDRLFF 505

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|157110821|ref|XP_001651260.1| protein kinase c [Aedes aegypti] gi|108883861|gb|EAT48086.1| AAEL000810-PA [Aedes aegypti]

 Score =  145 bits (365), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/94 (77%), Positives = 82/94 (87%), Gaps = 3/94 (3%)

Query: 87  RGSSGGDR--KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDV 144
           R +SGG    K+ L DF+FIKVLGKGSFGKVMLAE++G+ DEVYA+KVLKKDVI+QDDDV
Sbjct: 402 RAASGGQTVGKMCLNDFNFIKVLGKGSFGKVMLAERKGT-DEVYAIKVLKKDVILQDDDV 460

Query: 145 DCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DCTMTEKRILALAAKHPFLTALHSCFQT  +  F
Sbjct: 461 DCTMTEKRILALAAKHPFLTALHSCFQTPDRLFF 494

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195036392|ref|XP_001989654.1| GH18675 [Drosophila grimshawi] gi|193893850|gb|EDV92716.1| GH18675 [Drosophila grimshawi]

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 73/93 (78%), Positives = 79/93 (84%), Gaps = 3/93 (3%)

Query: 88  GSSGGDR--KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVD 145
           G+ GG R  K  L DF+FIKVLGKGSFGKVMLAEK+GS DE+YA+KVLKKD IIQDDDVD
Sbjct: 390 GAGGGSRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGS-DEIYAIKVLKKDAIIQDDDVD 448

Query: 146 CTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           CTMTEKRILALAA HPFLTALHSCFQT  +  F
Sbjct: 449 CTMTEKRILALAANHPFLTALHSCFQTPDRLFF 481

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24650924|ref|NP_524545.2| protein C kinase 98E, isoform A [Drosophila melanogaster] gi|7301734|gb|AAF56846.1| protein C kinase 98E, isoform A [Drosophila melanogaster]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 3/98 (3%)

Query: 83  GGSGRGSSGGDR--KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ 140
           G  G G++G  R  K  L DF+FIKVLGKGSFGKVMLAEK+G+ DE+YA+KVLKKD IIQ
Sbjct: 388 GSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGT-DEIYAIKVLKKDAIIQ 446

Query: 141 DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DDDVDCTMTEKRILALAA HPFLTALHSCFQT  +  F
Sbjct: 447 DDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFF 484

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125547|sp|P13678.1|KPC3_DROME RecName: Full=Protein kinase C; Short=PKC; AltName: Full=dPKC98F gi|158129|gb|AAA28818.1| protein kinase C [Drosophila melanogaster]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 3/98 (3%)

Query: 83  GGSGRGSSGGDR--KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ 140
           G  G G++G  R  K  L DF+FIKVLGKGSFGKVMLAEK+G+ DE+YA+KVLKKD IIQ
Sbjct: 283 GSGGVGATGETRPGKCSLLDFNFIKVLGKGSFGKVMLAEKKGT-DEIYAIKVLKKDAIIQ 341

Query: 141 DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           DDDVDCTMTEKRILALAA HPFLTALHSCFQT  +  F
Sbjct: 342 DDDVDCTMTEKRILALAANHPFLTALHSCFQTPDRLFF 379

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
WB|WBGene00004032	763	pkc-1 [Caenorhabditis elegans	0.460	0.107	0.590	2.2e-21
FB|FBgn0003093	634	Pkc98E "Protein C kinase 98E"	0.466	0.130	0.642	6.1e-21
UNIPROTKB|E9PBI2	219	PRKCE "Protein kinase C epsilo	0.443	0.360	0.612	2.7e-20
UNIPROTKB|F1NG47	610	PRKCE "Uncharacterized protein	0.471	0.137	0.6	4.1e-20
UNIPROTKB|F1LMV8	546	Prkce "Protein kinase C epsilo	0.471	0.153	0.588	1.1e-19
UNIPROTKB|F1S5K7	600	PRKCE "Uncharacterized protein	0.471	0.14	0.588	1.4e-19
UNIPROTKB|P10830	736	PRKCE "Protein kinase C epsilo	0.471	0.114	0.588	2e-19
UNIPROTKB|F1MDC9	737	PRKCE "Uncharacterized protein	0.471	0.113	0.588	2e-19
UNIPROTKB|Q02156	737	PRKCE "Protein kinase C epsilo	0.471	0.113	0.588	2e-19
MGI|MGI:97599	737	Prkce "protein kinase C, epsil	0.471	0.113	0.588	2e-19

WB|WBGene00004032 pkc-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 231 (86.4 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
 Identities = 49/83 (59%), Positives = 57/83 (68%)

Query:    96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILA 155
             + + DF F+KVLGKGSFGKVMLAE++G+ DEVYA                CTM EKRIL+
Sbjct:   429 LSIHDFTFMKVLGKGSFGKVMLAERKGT-DEVYAIKILKKDVIVQDDDVECTMCEKRILS 487

Query:   156 LAAKHPFLTALHSCFQTKVKCSF 178
             LAAKHPFLTALHS FQT  +  F
Sbjct:   488 LAAKHPFLTALHSSFQTSDRLFF 510

GO:0004697 "protein kinase C activity" evidence=IEA;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0007269 "neurotransmitter secretion" evidence=IMP

GO:0006935 "chemotaxis" evidence=IMP

GO:0040012 "regulation of locomotion" evidence=IMP

FB|FBgn0003093 Pkc98E "Protein C kinase 98E" [Drosophila melanogaster (taxid:7227)]

 Score = 255 (94.8 bits), Expect = 6.1e-21, P = 6.1e-21
 Identities = 54/84 (64%), Positives = 59/84 (70%)

Query:    95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
             K  L DF+FIKVLGKGSFGKVMLAEK+G+ DE+YA                CTMTEKRIL
Sbjct:   297 KCSLLDFNFIKVLGKGSFGKVMLAEKKGT-DEIYAIKVLKKDAIIQDDDVDCTMTEKRIL 355

Query:   155 ALAAKHPFLTALHSCFQTKVKCSF 178
             ALAA HPFLTALHSCFQT  +  F
Sbjct:   356 ALAANHPFLTALHSCFQTPDRLFF 379

GO:0004697 "protein kinase C activity" evidence=IEA;ISS;NAS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;NAS

GO:0019992 "diacylglycerol binding" evidence=ISS;NAS

GO:0004698 "calcium-dependent protein kinase C activity" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0045471 "response to ethanol" evidence=IDA

GO:0034389 "lipid particle organization" evidence=IMP

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0007030 "Golgi organization" evidence=IMP

UNIPROTKB|E9PBI2 PRKCE "Protein kinase C epsilon type" [Homo sapiens (taxid:9606)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 49/80 (61%), Positives = 58/80 (72%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   124 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 182

Query:   154 LALAAKHPFLTALHSCFQTK 173
             LALA KHP+LT L+ CFQTK
Sbjct:   183 LALARKHPYLTQLYCCFQTK 202

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NG47 PRKCE "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
 Identities = 51/85 (60%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GLE+F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   274 KRIGLEEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 332

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   333 LALARKHPYLTQLYCCFQTKDRLFF 357

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

UNIPROTKB|F1LMV8 Prkce "Protein kinase C epsilon type" [Rattus norvegicus (taxid:10116)]

 Score = 242 (90.2 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   210 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 268

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   269 LALARKHPYLTQLYCCFQTKDRLFF 293

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

UNIPROTKB|F1S5K7 PRKCE "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   264 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 322

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   323 LALARKHPYLTQLYCCFQTKDRLFF 347

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|P10830 PRKCE "Protein kinase C epsilon type" [Oryctolagus cuniculus (taxid:9986)]

 Score = 242 (90.2 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   400 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 458

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   459 LALARKHPYLTQLYCCFQTKDRLFF 483

GO:0003785 "actin monomer binding" evidence=ISS

GO:0010634 "positive regulation of epithelial cell migration" evidence=ISS

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS

GO:0030838 "positive regulation of actin filament polymerization" evidence=ISS

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=ISS

GO:0071944 "cell periphery" evidence=ISS

GO:0090303 "positive regulation of wound healing" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

UNIPROTKB|F1MDC9 PRKCE "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 242 (90.2 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   401 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 459

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   460 LALARKHPYLTQLYCCFQTKDRLFF 484

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0010763 "positive regulation of fibroblast migration" evidence=IEA

GO:0010634 "positive regulation of epithelial cell migration" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

UNIPROTKB|Q02156 PRKCE "Protein kinase C epsilon type" [Homo sapiens (taxid:9606)]

 Score = 242 (90.2 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   401 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 459

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   460 LALARKHPYLTQLYCCFQTKDRLFF 484

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0004699 "calcium-independent protein kinase C activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0030546 "receptor activator activity" evidence=IEA

GO:0032024 "positive regulation of insulin secretion" evidence=IEA

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035276 "ethanol binding" evidence=IEA

GO:0035641 "locomotory exploration behavior" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0043278 "response to morphine" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050996 "positive regulation of lipid catabolic process" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IEA

GO:0070257 "positive regulation of mucus secretion" evidence=IEA

GO:0071361 "cellular response to ethanol" evidence=IEA

GO:0071456 "cellular response to hypoxia" evidence=IEA

GO:0071889 "14-3-3 protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0019899 "enzyme binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0090303 "positive regulation of wound healing" evidence=IMP

GO:0010634 "positive regulation of epithelial cell migration" evidence=IMP

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IMP

GO:0010763 "positive regulation of fibroblast migration" evidence=ISS

GO:0030838 "positive regulation of actin filament polymerization" evidence=ISS

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=ISS

GO:0003785 "actin monomer binding" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0071944 "cell periphery" evidence=ISS

GO:0004871 "signal transducer activity" evidence=TAS

GO:0006917 "induction of apoptosis" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007202 "activation of phospholipase C activity" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0004697 "protein kinase C activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0008047 "enzyme activator activity" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:2001031 "positive regulation of cellular glucuronidation" evidence=IMP

MGI|MGI:97599 Prkce "protein kinase C, epsilon" [Mus musculus (taxid:10090)]

 Score = 242 (90.2 bits), Expect = 2.0e-19, P = 2.0e-19
 Identities = 50/85 (58%), Positives = 60/85 (70%)

Query:    94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
             +++GL++F+FIKVLGKGSFGKVMLAE +G  DEVYA                CTMTEKRI
Sbjct:   401 KRLGLDEFNFIKVLGKGSFGKVMLAELKGK-DEVYAVKVLKKDVILQDDDVDCTMTEKRI 459

Query:   154 LALAAKHPFLTALHSCFQTKVKCSF 178
             LALA KHP+LT L+ CFQTK +  F
Sbjct:   460 LALARKHPYLTQLYCCFQTKDRLFF 484

GO:0000139 "Golgi membrane" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IMP

GO:0003785 "actin monomer binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004697 "protein kinase C activity" evidence=ISO

GO:0004699 "calcium-independent protein kinase C activity" evidence=IDA

GO:0005102 "receptor binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007635 "chemosensory behavior" evidence=TAS

GO:0008047 "enzyme activator activity" evidence=ISO

GO:0010634 "positive regulation of epithelial cell migration" evidence=ISO

GO:0010763 "positive regulation of fibroblast migration" evidence=IMP

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IGI;IMP

GO:0010917 "negative regulation of mitochondrial membrane potential" evidence=ISO

GO:0016020 "membrane" evidence=IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0019216 "regulation of lipid metabolic process" evidence=IMP

GO:0019899 "enzyme binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030546 "receptor activator activity" evidence=IDA

GO:0030838 "positive regulation of actin filament polymerization" evidence=IDA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IMP

GO:0032024 "positive regulation of insulin secretion" evidence=IMP

GO:0032230 "positive regulation of synaptic transmission, GABAergic" evidence=IMP

GO:0035276 "ethanol binding" evidence=IDA

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0035641 "locomotory exploration behavior" evidence=IGI

GO:0035669 "TRAM-dependent toll-like receptor 4 signaling pathway" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0043278 "response to morphine" evidence=IMP

GO:0043410 "positive regulation of MAPK cascade" evidence=IDA;IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IMP

GO:0050996 "positive regulation of lipid catabolic process" evidence=IMP

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IMP

GO:0051280 "negative regulation of release of sequestered calcium ion into cytosol" evidence=ISO

GO:0051301 "cell division" evidence=IEA

GO:0051562 "reduction of mitochondrial calcium ion concentration" evidence=ISO

GO:0061178 "regulation of insulin secretion involved in cellular response to glucose stimulus" evidence=IMP

GO:0070257 "positive regulation of mucus secretion" evidence=IMP

GO:0071361 "cellular response to ethanol" evidence=IGI

GO:0071456 "cellular response to hypoxia" evidence=IDA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=ISO

GO:0071889 "14-3-3 protein binding" evidence=IPI

GO:0071944 "cell periphery" evidence=IDA

GO:0090303 "positive regulation of wound healing" evidence=ISO

GO:2001031 "positive regulation of cellular glucuronidation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P36583	PCK2_SCHPO	2, ., 7, ., 1, 1, ., 1, 3	0.5402	0.4719	0.0826	yes	N/A
P16054	KPCE_MOUSE	2, ., 7, ., 1, 1, ., 1, 3	0.6969	0.5505	0.1329	yes	N/A
P09216	KPCE_RAT	2, ., 7, ., 1, 1, ., 1, 3	0.6969	0.5505	0.1329	yes	N/A
Q00078	KPC1_ASPNG	2, ., 7, ., 1, 1, ., 1, 3	0.5348	0.4662	0.0757	yes	N/A
P10830	KPCE_RABIT	2, ., 7, ., 1, 1, ., 1, 3	0.7127	0.5224	0.1263	yes	N/A
P34885	KPC1B_CAEEL	2, ., 7, ., 1, 1, ., 1, 3	0.6732	0.5337	0.1343	yes	N/A
Q02156	KPCE_HUMAN	2, ., 7, ., 1, 1, ., 1, 3	0.7040	0.5449	0.1316	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	178
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	5e-43
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-42
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-40
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-36
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-33
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	8e-33
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-30
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-27
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-27
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	3e-26
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-23
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-20
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-19
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-18
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-18
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-17
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-17
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	9e-17
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-16
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-16
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	9e-16
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-15
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-15
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-15
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-15
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-15
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-14
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-13
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-12
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-12
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	7e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	9e-12
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-11
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	8e-11
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-10
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-09
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-09
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-09
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-08
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-08
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-08
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-07
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	3e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	3e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-06
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-06
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	8e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	0.001
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.001
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.002
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.002
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.003
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.003
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	0.003
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.004

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  145 bits (367), Expect = 5e-43
 Identities = 63/74 (85%), Positives = 68/74 (91%), Gaps = 1/74 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KVLGKGSFGKVMLAE +G+ DEVYA+KVLKKDVI+QDDDVDCTMTEKRILALAAKHPFLT
Sbjct: 1   KVLGKGSFGKVMLAELKGT-DEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLT 59

Query: 165 ALHSCFQTKVKCSF 178
           ALH CFQTK +  F
Sbjct: 60  ALHCCFQTKDRLFF 73

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  143 bits (362), Expect = 3e-42
 Identities = 56/73 (76%), Positives = 66/73 (90%), Gaps = 1/73 (1%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
           DF+F+ VLGKGSFGKVMLAE++G+ DE+YA+K+LKKDVIIQDDDV+CTM EKR+LAL  K
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGT-DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK 59

Query: 160 HPFLTALHSCFQT 172
            PFLT LHSCFQT
Sbjct: 60  PPFLTQLHSCFQT 72

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  138 bits (349), Expect = 2e-40
 Identities = 58/69 (84%), Positives = 65/69 (94%), Gaps = 1/69 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KVLGKGSFGKV+LAE +G+ DE+YAVKVLKKDVI+QDDDV+CTMTEKR+LALA KHPFLT
Sbjct: 1   KVLGKGSFGKVLLAELKGT-DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLT 59

Query: 165 ALHSCFQTK 173
            LHSCFQTK
Sbjct: 60  QLHSCFQTK 68

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score =  128 bits (323), Expect = 2e-36
 Identities = 56/79 (70%), Positives = 69/79 (87%), Gaps = 1/79 (1%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
           DF+F+ VLGKGSFGKVMLAE++G+ DE+YA+K+LKKDV+IQDDDV+CTM EKR+LAL+ K
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGT-DELYAIKILKKDVVIQDDDVECTMVEKRVLALSGK 59

Query: 160 HPFLTALHSCFQTKVKCSF 178
            PFLT LHSCFQT  +  F
Sbjct: 60  PPFLTQLHSCFQTMDRLYF 78

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  120 bits (301), Expect = 3e-33
 Identities = 55/73 (75%), Positives = 66/73 (90%), Gaps = 1/73 (1%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
           DF+F+ VLGKGSFGKVMLAE++G+ DE+YA+K+LKKDV+IQDDDV+CTM EKR+LAL  K
Sbjct: 1   DFNFLMVLGKGSFGKVMLAERKGT-DELYAIKILKKDVVIQDDDVECTMVEKRVLALQDK 59

Query: 160 HPFLTALHSCFQT 172
            PFLT LHSCFQT
Sbjct: 60  PPFLTQLHSCFQT 72

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  118 bits (298), Expect = 8e-33
 Identities = 51/68 (75%), Positives = 58/68 (85%), Gaps = 1/68 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           +VLGKGSFGKVMLA +   S  +YAVKVLKKDVI+QDDDV+CTMTEKRIL+LA  HPFLT
Sbjct: 1   RVLGKGSFGKVMLA-RLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 59

Query: 165 ALHSCFQT 172
            L+ CFQT
Sbjct: 60  QLYCCFQT 67

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  111 bits (278), Expect = 6e-30
 Identities = 47/69 (68%), Positives = 59/69 (85%), Gaps = 1/69 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KVLGKGSFGKVMLAE +G++ E +A+K LKKDV+++DDDV+CTM E+R+LALA +HPFLT
Sbjct: 1   KVLGKGSFGKVMLAELKGTN-EFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLT 59

Query: 165 ALHSCFQTK 173
            L   FQTK
Sbjct: 60  HLFCTFQTK 68

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  104 bits (261), Expect = 3e-27
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 3/80 (3%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA--A 158
           F  + VLG+G FGKV+LAE + +  E+YA+K LKK  II  D+V+  M EKRI   A   
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTG-ELYAIKALKKGDIIARDEVESLMCEKRIFETANSE 59

Query: 159 KHPFLTALHSCFQTKVKCSF 178
           +HPFL  L +CFQT+    F
Sbjct: 60  RHPFLVNLFACFQTEDHVCF 79

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score =  103 bits (258), Expect = 4e-27
 Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 1/69 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KVLGKGSFGKV+LAE +G   E +AVK LKKDV++ DDDV+CTM EKR+LALA ++PFLT
Sbjct: 1   KVLGKGSFGKVLLAELKGKG-EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLT 59

Query: 165 ALHSCFQTK 173
            L+  FQTK
Sbjct: 60  HLYCTFQTK 68

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score =  101 bits (252), Expect = 3e-26
 Identities = 44/69 (63%), Positives = 58/69 (84%), Gaps = 1/69 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           K+LGKGSFGKV LAE +G+ ++ +A+K LKKDV++ DDDV+CTM EKR+L+LA +HPFLT
Sbjct: 1   KMLGKGSFGKVFLAELKGT-NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 59

Query: 165 ALHSCFQTK 173
            L+  FQTK
Sbjct: 60  HLYCTFQTK 68

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 91.0 bits (227), Expect = 6e-23
 Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           LGKGSFGKV+L  K+  + ++YA+KVLKK  II+  +V+ T+TE+ IL+    HPF+  L
Sbjct: 1   LGKGSFGKVLLVRKK-DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSR-INHPFIVKL 58

Query: 167 HSCFQTKVKCSF 178
           H  FQT+ K   
Sbjct: 59  HYAFQTEEKLYL 70

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF FIK LG GSFG+VML  +   S + YA+K+L K  I++   V+  + EKRIL  + 
Sbjct: 1   DDFEFIKTLGTGSFGRVMLV-RHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRIL-QSI 58

Query: 159 KHPFLTALHSCFQ 171
           +HPFL  L+  FQ
Sbjct: 59  RHPFLVNLYGSFQ 71

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 83.3 bits (206), Expect = 2e-19
 Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           +V+G+GS+ KV+L E +  +  +YA+KV+KK+++  D+D+D   TEK +   A+ HPFL 
Sbjct: 1   RVIGRGSYAKVLLVELK-KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLV 59

Query: 165 ALHSCFQTKVKCSF 178
            LHSCFQT+ +  F
Sbjct: 60  GLHSCFQTESRLFF 73

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 80.2 bits (198), Expect = 2e-18
 Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 4/75 (5%)

Query: 105 KVLGKGSFGKVMLA-EKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFL 163
           K+LGKG+FGKV+L  EK     + YA+K+LKK+VII  D+V  T+TE R+L    +HPFL
Sbjct: 1   KLLGKGTFGKVILVREKATG--KYYAMKILKKEVIIAKDEVAHTLTESRVLQ-NTRHPFL 57

Query: 164 TALHSCFQTKVKCSF 178
           TAL   FQT  +  F
Sbjct: 58  TALKYSFQTHDRLCF 72

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 79.1 bits (195), Expect = 6e-18
 Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KV+GKGSFGKV+LA K  +  + YAVKVL+K  I++  +    M E+ +L    KHPFL 
Sbjct: 1   KVIGKGSFGKVLLA-KHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLV 59

Query: 165 ALHSCFQTKVKCSF 178
            LH  FQT  K  F
Sbjct: 60  GLHYSFQTADKLYF 73

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 77.6 bits (192), Expect = 1e-17
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF F K++G+GSF  V+LA+++ ++ E YA+K+L K  +I++  V     EK +L    
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKE-YAIKILDKRQLIKEKKVKYVKIEKEVLTRLN 59

Query: 159 KHPFLTALHSCFQ 171
            HP +  L+  FQ
Sbjct: 60  GHPGIIKLYYTFQ 72

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 77.0 bits (189), Expect = 4e-17
 Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 1/74 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           +V+G+GS+ KV+L   +  ++ +YA+KV+KK+++  D+D+D   TEK +   A+ HPFL 
Sbjct: 1   RVIGRGSYAKVLLVRLK-KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 59

Query: 165 ALHSCFQTKVKCSF 178
            LHSCFQT+ +  F
Sbjct: 60  GLHSCFQTESRLFF 73

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 9e-17
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
            F  IK+LGKG  G+V L   +G+  +++A+KVL K  +I+ + V   +TE+ ILA    
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKGTG-KLFALKVLDKKEMIKRNKVKRVLTEQEILAT-LD 59

Query: 160 HPFLTALHSCFQT 172
           HPFL  L++ FQT
Sbjct: 60  HPFLPTLYASFQT 72

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 74.6 bits (183), Expect = 2e-16
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KV+GKGSFGKV+LA KR S    YAVKVL+K  I++  + +  M E+ +L    KHPFL 
Sbjct: 1   KVIGKGSFGKVLLA-KRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLV 59

Query: 165 ALHSCFQTKVKCSF 178
            LH  FQT  K  F
Sbjct: 60  GLHYSFQTAEKLYF 73

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 74.3 bits (183), Expect = 4e-16
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF  IKV+G+G+FG+V L   +  + +VYA+KVL+K  +I+ + +     E+ ILA  A
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDK-DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILA-DA 58

Query: 159 KHPFLTALHSCFQ 171
             P++  L+  FQ
Sbjct: 59  DSPWIVKLYYSFQ 71

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 73.1 bits (179), Expect = 9e-16
 Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           +V+G+GS+ KV+L   +  +D++YA+KV+KK+++  D+D+D   TEK +   A+ +PFL 
Sbjct: 1   RVIGRGSYAKVLLVRLK-KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLV 59

Query: 165 ALHSCFQTKVK 175
            LHSCFQT  +
Sbjct: 60  GLHSCFQTTSR 70

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 72.1 bits (177), Expect = 1e-15
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 3/79 (3%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQD-DDVDCTMTEKRILAL 156
           +F  ++VLG G++GKV L  K G  D  ++YA+KVLKK  I+Q     + T TE+++L  
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 157 AAKHPFLTALHSCFQTKVK 175
             + PFL  LH  FQT  K
Sbjct: 61  VRRCPFLVTLHYAFQTDTK 79

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 72.4 bits (177), Expect = 2e-15
 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 3/75 (4%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEV-YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFL 163
           KV+GKGSFGKV+LA  R  ++E  YAVKVL+K  I++  +    M+E+ +L    KHPFL
Sbjct: 1   KVIGKGSFGKVLLA--RHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 58

Query: 164 TALHSCFQTKVKCSF 178
             LH  FQT  K  F
Sbjct: 59  VGLHFSFQTADKLYF 73

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 72.3 bits (177), Expect = 2e-15
 Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           KV+GKGSFGKV+LA KR    + YAVKVL+K +++   +    M E+ +L    KHPFL 
Sbjct: 1   KVIGKGSFGKVLLA-KRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLV 59

Query: 165 ALHSCFQTKVKCSF 178
            LH  FQT  K  F
Sbjct: 60  GLHYSFQTTEKLYF 73

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 71.2 bits (174), Expect = 4e-15
 Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           K+LGKG+FGKV+L  ++ +    YA+K+L+K+VII  D+V  T+TE R+L    +HPFLT
Sbjct: 1   KLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVLQ-NTRHPFLT 58

Query: 165 ALHSCFQTKVKCSF 178
           AL   FQT  +  F
Sbjct: 59  ALKYAFQTHDRLCF 72

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 70.3 bits (173), Expect = 5e-15
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           +  ++ LG+GSFGKV LA  +  + ++ A+KV+KK  I    D +  + E +IL    KH
Sbjct: 1   YEILEKLGEGSFGKVYLARDK-KTGKLVAIKVIKKKKI--KKDRERILREIKILKK-LKH 56

Query: 161 PFLTALHSCFQTK 173
           P +  L+  F+ +
Sbjct: 57  PNIVRLYDVFEDE 69

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 70.5 bits (172), Expect = 8e-15
 Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           K+LGKG+FGKV+L  ++ S  + YA+K+LKK+VII  D+V  T+TE R+L    +HPFLT
Sbjct: 1   KLLGKGTFGKVILVREKASG-KYYAMKILKKEVIIAKDEVAHTLTESRVLK-NTRHPFLT 58

Query: 165 ALHSCFQTKVKCSF 178
           +L   FQTK +  F
Sbjct: 59  SLKYSFQTKDRLCF 72

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 70.1 bits (171), Expect = 1e-14
 Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           K+LGKG+FGKV+L +++ +    YA+K+LKK+VI+  D+V  T+TE R+L   ++HPFLT
Sbjct: 1   KLLGKGTFGKVILVKEKATG-RYYAMKILKKEVIVAKDEVAHTLTENRVLQ-NSRHPFLT 58

Query: 165 ALHSCFQTKVKCSF 178
           AL   FQT  +  F
Sbjct: 59  ALKYSFQTHDRLCF 72

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 67.3 bits (164), Expect = 1e-13
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 3/79 (3%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDDD-VDCTMTEKRILAL 156
           +F  +KVLG G++GKV L  K    D  ++YA+KVL+K  ++Q    V+ T TE+ +L  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 157 AAKHPFLTALHSCFQTKVK 175
             + PFL  LH  FQT+ K
Sbjct: 61  VRQSPFLVTLHYAFQTEAK 79

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 62.9 bits (153), Expect = 4e-12
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDD-DVDCTMTEKRILALAAKH 160
           +KVLGKG +GKV    K   +D  +++A+KVLKK  I+++  D   T  E+ IL  A KH
Sbjct: 1   LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILE-AVKH 59

Query: 161 PFLTALHSCFQTKVK 175
           PF+  L   FQT  K
Sbjct: 60  PFIVDLIYAFQTGGK 74

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 62.3 bits (151), Expect = 4e-12
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQD-DDVDCTMTEKRILAL 156
           +F  +KVLG G++GKV L  K    D  ++YA+KVLKK  I+Q     + T TE+++L  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 157 AAKHPFLTALHSCFQTKVK 175
             + PFL  LH  FQT  K
Sbjct: 61  IRQSPFLVTLHYAFQTDTK 79

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 62.1 bits (151), Expect = 7e-12
 Identities = 36/74 (48%), Positives = 45/74 (60%), Gaps = 4/74 (5%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP 161
           +KVLG+GSFGKV L  K    D  ++YA+KVLKK  +   D V   M E+ ILA    HP
Sbjct: 1   LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKM-ERDILA-EVNHP 58

Query: 162 FLTALHSCFQTKVK 175
           F+  LH  FQT+ K
Sbjct: 59  FIVKLHYAFQTEGK 72

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 61.9 bits (150), Expect = 9e-12
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
             K+  EDF+FI+ LG GSFG+V+LA  +       A+K  +K  II+   VD   +E++
Sbjct: 24  KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERK 83

Query: 153 ILALAAKHPFLTALHSCFQ 171
           IL     HPF   L+  F+
Sbjct: 84  ILNY-INHPFCVNLYGSFK 101

Length = 340

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 60.9 bits (148), Expect = 2e-11
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
           DF  +  +G+G +G+V LA+K+  + E+ A+K +KK ++ + ++V   +TE+ IL    K
Sbjct: 2   DFQILTQVGQGGYGQVFLAKKK-DTGEIVALKRMKKSLLFKLNEVRHVLTERDILT-TTK 59

Query: 160 HPFLTALHSCFQ 171
             +L  L   FQ
Sbjct: 60  SEWLVKLLYAFQ 71

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 27/67 (40%), Positives = 48/67 (71%), Gaps = 2/67 (2%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           + KG++G+V LA+K+ S+ ++YA+KV+KK  +I+ + VD  +TE+ IL+  A+ P++  L
Sbjct: 1   ISKGAYGRVFLAKKK-STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ-AQSPYVVKL 58

Query: 167 HSCFQTK 173
           +  FQ K
Sbjct: 59  YYSFQGK 65

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 59.0 bits (143), Expect = 8e-11
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           ++  EDF  IKV+G+G+FG+V L   + SS +VYA+K+L K  +I+  D      E+ I+
Sbjct: 39  RMKAEDFDVIKVIGRGAFGEVQLVRHK-SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM 97

Query: 155 ALAAKHPFLTALHSCFQ 171
           A  A   ++  LH  FQ
Sbjct: 98  AH-ANSEWIVQLHYAFQ 113

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           F  ++V+GKG+FGKV + +KR  + +++A+K + K   ++   V   + E+RIL     H
Sbjct: 2   FELLRVIGKGAFGKVCIVQKR-DTKKMFAMKYMNKQKCVEKGSVRNVLNERRIL-QELNH 59

Query: 161 PFLTALHSCFQ 171
           PFL  L   FQ
Sbjct: 60  PFLVNLWYSFQ 70

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 56.5 bits (136), Expect = 5e-10
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           +GKGSFGKVM   KR +   +YA+K ++K  I+   +V  T+ E+ +LA     PF+  L
Sbjct: 1   IGKGSFGKVMQVRKRDTQ-RIYALKTIRKAHIVSRSEVTHTLAERTVLA-QVNCPFIVPL 58

Query: 167 HSCFQTKVKCSF 178
              FQ+  K   
Sbjct: 59  KFSFQSPEKLYL 70

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L DF   + LG GSFG+V +A+ +G+  E YA+K LKK  I++   V     EK IL + 
Sbjct: 17  LSDFEMGETLGTGSFGRVRIAKHKGTG-EYYAIKCLKKREILKMKQVQHVAQEKSIL-ME 74

Query: 158 AKHPFLTALHSCFQTKVKCSF 178
             HPF+  +   FQ + +  F
Sbjct: 75  LSHPFIVNMMCSFQDENRVYF 95

Length = 329

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 54.5 bits (131), Expect = 4e-09
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +E+F  +K + +G+FGKV L  K+ +S ++YAVKV+KK  +I  + V     E+  LAL 
Sbjct: 3   IEEFVIVKPISRGAFGKVYLGRKKNNS-KLYAVKVVKKADMINKNMVHQVQAERDALAL- 60

Query: 158 AKHPFLTALHSCFQT 172
           +K PF+  L+   Q+
Sbjct: 61  SKSPFIVHLYYSLQS 75

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 53.9 bits (130), Expect = 5e-09
 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF  IKV+G+G+FG+V L +K+ +   +YA+K L+K  +++ + V     E+ ILA  A
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTGH-IYAMKKLRKSEMLEKEQVAHVRAERDILA-EA 58

Query: 159 KHPFLTALHSCFQ 171
            +P++  L+  FQ
Sbjct: 59  DNPWVVKLYYSFQ 71

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.6 bits (127), Expect = 7e-09
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
            +  ++ LG+GSFG+V LA  R    ++ A+KVL K +  +  +V+  + E +ILA    
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASLNH 56

Query: 160 HPFLTALHSCFQTK 173
            P +  L+  FQ +
Sbjct: 57  PPNIVKLYDFFQDE 70

Length = 384

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           EDFH +KV+GKG+FG+V L +K+  + ++YA+K L K  + + D +     E+ +LA  +
Sbjct: 1   EDFHTVKVIGKGAFGEVRLVQKK-DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLA-ES 58

Query: 159 KHPFLTALHSCFQ 171
             P++ +L+  FQ
Sbjct: 59  DSPWVVSLYYSFQ 71

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL--ALAAKHPFLT 164
           +GKG+FG+V    K+  +  +YA+KVL K  I+   +V  T+ E+ IL   L  + PF+ 
Sbjct: 1   IGKGTFGQVYQVRKK-DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIV 59

Query: 165 ALHSCFQT 172
            L   FQT
Sbjct: 60  GLKFSFQT 67

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFL 163
           +K + KG+FG V LA+KR S+ + +A+KVLKK  +I  + V     E+ I+ +  + P++
Sbjct: 1   LKPISKGAFGSVYLAKKR-STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYV 59

Query: 164 TALHSCFQTK 173
             L+  FQ+K
Sbjct: 60  AKLYYSFQSK 69

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           +  ++ LG GSFG V  A+ +G+   V AVK+LKK       D      E RIL     H
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIV-AVKILKKRSEKSKKDQTAR-REIRILRR-LSH 57

Query: 161 PFLTALHSCFQTK 173
           P +  L   F+ K
Sbjct: 58  PNIVRLIDAFEDK 70

Length = 260

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF  +KV+G+G+FG+V + + +  + +VYA+K+L K  +++  +  C   E+ +L    
Sbjct: 1   DDFEILKVIGRGAFGEVAVVKMKN-TGQVYAMKILNKWEMLKRAETACFREERDVLVNGD 59

Query: 159 KHPFLTALHSCFQ 171
           +  ++T LH  FQ
Sbjct: 60  RR-WITNLHYAFQ 71

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF    ++G+G FG+V +  ++ + D +YA+KV+KK V++  + V     E+ IL+++ 
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGD-IYAMKVMKKSVLLAQETVSFFEEERDILSISN 59

Query: 159 KHPFLTALHSCFQTK 173
             P++  L   FQ K
Sbjct: 60  S-PWIPQLQYAFQDK 73

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
           DF  +K LGKGS+G V    KR S ++ YA+K +    + Q +  D  + E RILA +  
Sbjct: 1   DFKVLKKLGKGSYGSVYKV-KRLSDNQFYALKEVDLGSMSQKERED-AVNEIRILA-SVN 57

Query: 160 HPFLTALHSCF 170
           HP + +    F
Sbjct: 58  HPNIISYKEAF 68

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           LG G FG+V L + + S +  +A+K +KK  I++    +   +EK IL     HPF+  L
Sbjct: 1   LGVGGFGRVELVKVK-SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKL 58

Query: 167 HSCFQ 171
           +  F+
Sbjct: 59  YRTFK 63

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           EDF  +KV+G+G+FG+V +  K  ++D+V+A+K+L K  +++  +  C   E+ +L +  
Sbjct: 1   EDFEILKVIGRGAFGEVAVV-KLKNADKVFAMKILNKWEMLKRAETACFREERDVL-VNG 58

Query: 159 KHPFLTALHSCFQ 171
            + ++T LH  FQ
Sbjct: 59  DNQWITTLHYAFQ 71

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 48.8 bits (116), Expect = 3e-07
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF  IKV+G+G+FG+V +  K   ++ +YA+K+L K  +++  +  C   E+ +L +  
Sbjct: 1   DDFEIIKVIGRGAFGEVAVV-KMKHTERIYAMKILNKWEMLKRAETACFREERNVL-VNG 58

Query: 159 KHPFLTALHSCFQ 171
              ++T LH  FQ
Sbjct: 59  DCQWITTLHYAFQ 71

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           ED+  +KV+G+G+FG+V L   + SS +VYA+K+L K  +I+  D      E+ I+A  A
Sbjct: 43  EDYDVVKVIGRGAFGEVQLVRHK-SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-A 100

Query: 159 KHPFLTALHSCFQ 171
             P++  L   FQ
Sbjct: 101 NSPWVVQLFCAFQ 113

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 47.3 bits (112), Expect = 9e-07
 Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
           D ++  ED+  +KV+G+G+FG+V L   + S+ +VYA+K+L K  +I+  D      E+ 
Sbjct: 37  DLRMKAEDYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEMIKRSDSAFFWEERD 95

Query: 153 ILALAAKHPFLTALHSCFQ 171
           I+A  A  P++  L   FQ
Sbjct: 96  IMAF-ANSPWVVQLFYAFQ 113

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKV--LKKDVIIQDDDVDCTMTEKRILALAAKHP 161
           IK +GKGSFGKV L  +R S  ++Y +K   L       + + +  + E +IL     HP
Sbjct: 5   IKQIGKGSFGKVYLV-RRKSDGKLYVLKEIDLSNM---SEKEREDALNEVKILK-KLNHP 59

Query: 162 FLTALHSCFQTK 173
            +   +  F+ K
Sbjct: 60  NIIKYYESFEEK 71

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +D   IK +G G+FG+V L   R  S+  YA+KV+    +I+         EKR+L    
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDR-ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVL-KEV 58

Query: 159 KHPFLTAL 166
            HPF+  L
Sbjct: 59  SHPFIIRL 66

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           EDF  +KV+G+G+FG+V L +K+  +  VYA+K+L+K  +++ + V     E+ IL + A
Sbjct: 1   EDFESLKVIGRGAFGEVRLVQKK-DTGHVYAMKILRKADMLEKEQVGHIRAERDIL-VEA 58

Query: 159 KHPFLTALHSCFQTKV 174
              ++  +   FQ K+
Sbjct: 59  DSLWVVKMFYSFQDKL 74

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           LG+G FG V LA  +  + +  A+K++KK+       ++  + E  IL     HP +  L
Sbjct: 1   LGEGGFGTVYLARDKK-TGKKVAIKIIKKED--SSSLLEELLREIEILKK-LNHPNIVKL 56

Query: 167 HSCFQTK 173
           +  F+ +
Sbjct: 57  YGVFEDE 63

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 44.4 bits (105), Expect = 8e-06
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           EDF  IK++  G++G V L   +  + + +A+K + K  +I  + +     E+ IL   A
Sbjct: 1   EDFETIKLISNGAYGAVYLVRHK-ETRQRFAMKKINKQNLILRNQIQQVFVERDILTF-A 58

Query: 159 KHPFLTALHSCFQTK 173
           ++PF+ ++   F+TK
Sbjct: 59  ENPFVVSMFCSFETK 73

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 44.8 bits (106), Expect = 8e-06
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           F  IK +G G+FG+V L  K  ++  +YA+K L+K  ++  +       E+ ILA  A +
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKVDTN-ALYAMKTLRKADVLMRNQAAHVKAERDILA-EADN 60

Query: 161 PFLTALHSCFQTK 173
            ++  L+  FQ K
Sbjct: 61  EWVVKLYYSFQDK 73

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 44.2 bits (104), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF  +KV+G+G+FG+V L +K+  +  +YA+K+L+K  +++ + V     E+ IL + A
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKK-DTGHIYAMKILRKADMLEKEQVAHIRAERDIL-VEA 58

Query: 159 KHPFLTALHSCFQTK 173
              ++  +   FQ K
Sbjct: 59  DGAWVVKMFYSFQDK 73

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCT---MTEKRILA 155
            D   +KVLG+GS G V     + +  ++YA+K      I  D D +     + E + L 
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTG-KIYALK-----KIHVDGDEEFRKQLLRELKTL- 53

Query: 156 LAAKHPFLTALHSCF 170
            + + P++   +  F
Sbjct: 54  RSCESPYVVKCYGAF 68

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKD 136
               K LG+G+FG+V     +G  +      AVK LK+ 
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEG 39

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 41.4 bits (98), Expect = 7e-05
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 103 FIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKDVIIQD-DDVDCTMTEKRILALAA 158
             K LG+G+FG+V     +G  D      AVK LK+D   Q  ++    + E RI+    
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEF---LREARIMR-KL 58

Query: 159 KHPFLTALH 167
            HP +  L 
Sbjct: 59  DHPNIVKLL 67

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
            ED+  I+ +G G++G V  A    ++ E+ A+KV+K +     DD +    E  +L   
Sbjct: 2   QEDYELIQRIGSGTYGDVYKARDI-ATGELVAIKVIKLE---PGDDFEIIQQEISMLK-E 56

Query: 158 AKHP 161
            +HP
Sbjct: 57  CRHP 60

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 96  VGLEDFHFIKVLGKGSFGKVMLAE----KRGSSDEVYAVKVLK 134
           V  +     + LG+G+FGKV L E    +  +  E+ AVK LK
Sbjct: 2   VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLK 44

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           LGKG FG+V   + R +  ++YA K L K  + +    +  M EKRILA      F+ +L
Sbjct: 1   LGKGGFGEVSACQMRATG-KLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSR-FIVSL 58

Query: 167 HSCFQTK 173
              FQTK
Sbjct: 59  AYAFQTK 65

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 39.4 bits (93), Expect = 3e-04
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 103 FIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKD 136
             K LG+G+FG+V   + +G   +     AVK LK+D
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKED 39

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           F  IK LG G+FG+V LA K   +  +YA+K L+K  ++  + V     E+ ILA  A +
Sbjct: 3   FVKIKTLGIGAFGEVCLARKV-DTKALYAMKTLRKKDVLLRNQVAHVKAERDILA-EADN 60

Query: 161 PFLTALHSCFQTK 173
            ++  L+  FQ K
Sbjct: 61  EWVVRLYYSFQDK 73

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK 135
           IK LG G+FG V LA  +  + E+ A+K +KK
Sbjct: 4   IKQLGDGTFGSVYLARNK-ETGELVAIKKMKK 34

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA-AK 159
           +  IK +G+GSFGK+ LA+ +  S+     ++    + +++ +     ++K ++ LA  K
Sbjct: 2   YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEA----SKKEVILLAKMK 57

Query: 160 HPFLTALHSCFQ 171
           HP +    + FQ
Sbjct: 58  HPNIVTFFASFQ 69

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFL 163
           IK LG G+FG+V LA K   +  +YA+K L+K  ++  + V     E+ ILA  A + ++
Sbjct: 6   IKTLGIGAFGEVCLACKV-DTHALYAMKTLRKKDVLNRNQVAHVKAERDILA-EADNEWV 63

Query: 164 TALHSCFQTK 173
             L+  FQ K
Sbjct: 64  VKLYYSFQDK 73

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVY--AVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF 162
           K LG+G+FG+V   + +G   +    AVK LK+D    +++    + E R++     HP 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKED--ASEEERKDFLKEARVMK-KLGHPN 57

Query: 163 LTAL 166
           +  L
Sbjct: 58  VVRL 61

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
            ++ ++V+G+GSFG+ +L +   +SD+ YA+K ++  +      V+ +  E  +LA   K
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHV-NSDQKYAMKEIR--LPKSSSAVEDSRKEAVLLA-KMK 56

Query: 160 HPFLTALHSCFQ 171
           HP + A    F+
Sbjct: 57  HPNIVAFKESFE 68

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL 166
           LGKG FG+V   + + +  ++YA K L K  + +       + EK+IL   +   F+ +L
Sbjct: 1   LGKGGFGEVCACQVKATG-KMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS-RFIVSL 58

Query: 167 HSCFQTKVKCSF 178
              F+TK     
Sbjct: 59  AYAFETKDDLCL 70

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           F   +VLGKG FG+V   + R +  ++YA K L+K  I +       + EK+IL      
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATG-KMYACKKLEKKRIKKRKGEAMALNEKQILE-KVNS 59

Query: 161 PFLTALHSCFQTK 173
            F+ +L   ++TK
Sbjct: 60  RFVVSLAYAYETK 72

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 17/78 (21%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLK------KDVIIQDDDVDCTMTEKRI 153
            F  ++ +GKG FG+V  A  + +  EV A+KV+K      K+ II          E +I
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEV-AIKVIKLESKEKKEKIIN---------EIQI 50

Query: 154 LALAAKHPFLTALHSCFQ 171
           L    KHP +   +  + 
Sbjct: 51  LKK-CKHPNIVKYYGSYL 67

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ 140
           +++   ++ +GKG FG VML + RG+     AVK +K D   Q
Sbjct: 5   MKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKNDATAQ 44

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF 162
           ++LG+GSFG V LA  + +  E+ AVK ++     + ++++    E RIL+ + +HP 
Sbjct: 6   ELLGRGSFGSVYLALDKDTG-ELMAVKSVELSGDSE-EELEALEREIRILS-SLQHPN 60

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 6/62 (9%)

Query: 103 FIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           F K LG G+FGKV+ A   G   E      AVK+LK       D+ +  M+E +IL+   
Sbjct: 42  FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLG 99

Query: 159 KH 160
           +H
Sbjct: 100 QH 101

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
KOG0575|consensus	592		99.62
KOG0598|consensus	357		99.6
KOG0605|consensus	550		99.57
KOG0580|consensus	281		99.57
KOG0595|consensus	429		99.56
KOG0694|consensus	694		99.56
KOG0615|consensus	475		99.53
KOG0592|consensus	604		99.42
KOG0585|consensus	576		99.42
KOG0597|consensus	808		99.41
KOG0616|consensus	355		99.4
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.39
KOG0593|consensus	396		99.37
KOG0659|consensus	318		99.37
KOG0032|consensus	382		99.35
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.35
KOG0581|consensus	364		99.34
KOG0600|consensus	560		99.34
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.33
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.32
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.3
KOG0610|consensus	459		99.3
KOG0591|consensus	375		99.3
KOG0582|consensus	516		99.3
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.29
KOG0611|consensus	668		99.29
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.29
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.27
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.26
KOG0586|consensus	596		99.25
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.25
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.25
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.25
KOG4236|consensus	888		99.25
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.24
KOG0583|consensus	370		99.23
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.22
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.22
KOG0588|consensus	786		99.22
KOG0194|consensus	474		99.22
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.2
KOG0690|consensus	516		99.2
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.2
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.2
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.2
KOG1152|consensus	772		99.19
KOG4717|consensus	864		99.19
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.19
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.19
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.19
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.19
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.18
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.18
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.18
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.17
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.16
KOG0663|consensus	419		99.16
KOG0695|consensus	593		99.14
PHA03212	391	serine/threonine kinase US3; Provisional	99.13
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.13
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.13
KOG0667|consensus	586		99.13
KOG0662|consensus	292		99.13
KOG1035|consensus	1351		99.12
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.12
KOG1094|consensus	807		99.12
KOG1026|consensus	774		99.12
KOG0612|consensus	1317		99.11
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.11
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.11
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.11
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.11
KOG0661|consensus	538		99.11
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.11
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.1
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.1
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.1
KOG0594|consensus	323		99.1
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.1
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.1
KOG0197|consensus	468		99.1
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.09
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.09
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.09
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.09
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.09
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.09
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.09
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.08
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.08
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.08
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.08
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.07
PHA03207	392	serine/threonine kinase US3; Provisional	99.07
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.07
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.07
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.07
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.06
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.06
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.05
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.05
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.05
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.05
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.05
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.04
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.04
PLN00009	294	cyclin-dependent kinase A; Provisional	99.04
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.04
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.03
KOG0192|consensus	362		99.03
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.03
KOG1187|consensus	361		99.03
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.03
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.03
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.02
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.02
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.02
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.02
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.02
KOG0193|consensus	678		99.01
KOG0589|consensus	426		99.01
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.01
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.01
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.0
KOG0696|consensus	683		99.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.0
KOG0201|consensus	467		99.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.99
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.99
KOG0607|consensus	463		98.99
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.99
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.99
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.99
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.99
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.99
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.98
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.98
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.98
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.98
KOG0658|consensus	364		98.98
KOG0579|consensus	1187		98.98
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.98
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.96
PHA03210	501	serine/threonine kinase US3; Provisional	98.96
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.96
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.95
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.95
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.95
KOG4250|consensus	732		98.95
KOG0033|consensus	355		98.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.94
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.94
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.93
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.93
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.93
KOG0574|consensus	502		98.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.93
PHA03209	357	serine/threonine kinase US3; Provisional	98.93
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.92
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.92
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.92
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.92
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.91
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.91
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.91
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.91
PTZ00267	478	NIMA-related protein kinase; Provisional	98.9
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.9
PTZ00284	467	protein kinase; Provisional	98.9
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.9
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.9
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.9
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.89
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.89
PHA03211	461	serine/threonine kinase US3; Provisional	98.89
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.89
PTZ00036	440	glycogen synthase kinase; Provisional	98.89
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.88
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.88
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.88
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.88
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.88
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.88
KOG1095|consensus	1025		98.88
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.88
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.88
KOG1290|consensus	590		98.88
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.88
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.87
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.87
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.87
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.86
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.86
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.86
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.86
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.86
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.86
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.86
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.85
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.85
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.85
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.84
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.84
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.84
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.84
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.84
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.84
PTZ00283	496	serine/threonine protein kinase; Provisional	98.83
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.83
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.83
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.83
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.83
KOG0198|consensus	313		98.83
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.83
KOG0608|consensus	1034		98.82
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.82
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.82
KOG0660|consensus	359		98.82
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.82
KOG0577|consensus	948		98.82
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.82
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.81
PRK09188	365	serine/threonine protein kinase; Provisional	98.81
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.81
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.81
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.81
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.81
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.81
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.81
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.81
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.8
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.8
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.8
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.8
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.8
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.8
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.79
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.79
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.79
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.79
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.79
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.79
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.79
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.79
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.78
KOG1006|consensus	361		98.78
KOG4257|consensus	974		98.78
KOG0199|consensus	1039		98.78
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.78
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.78
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.78
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.77
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.77
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.77
KOG0983|consensus	391		98.77
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.77
KOG0196|consensus	996		98.76
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.76
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.75
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.75
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.75
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.75
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.75
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.75
PHA02988	283	hypothetical protein; Provisional	98.74
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.74
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.74
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.74
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.74
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.74
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.74
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.73
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.73
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.73
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.73
KOG4278|consensus	1157		98.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.73
KOG1989|consensus	738		98.73
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.73
KOG2345|consensus	302		98.72
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.72
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.72
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.72
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.71
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.7
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.69
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.69
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.68
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.68
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.68
KOG0614|consensus	732		98.68
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.68
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.68
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.68
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.67
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.67
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.67
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.66
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.66
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.66
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.66
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.66
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.65
KOG0986|consensus	591		98.65
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.65
KOG0666|consensus	438		98.65
KOG0668|consensus	338		98.65
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.64
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.64
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.63
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.63
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.62
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.62
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.62
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.62
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.61
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.61
KOG0584|consensus	632		98.61
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.6
KOG0578|consensus	550		98.6
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.6
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.6
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.59
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.59
KOG0576|consensus	829		98.58
KOG1151|consensus	775		98.58
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.57
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.57
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.56
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.55
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.55
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.54
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.51
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.5
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.49
KOG2052|consensus	513		98.49
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.49
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.48
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.48
KOG4279|consensus	1226		98.48
KOG1025|consensus	1177		98.46
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.44
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.44
PRK10345	210	hypothetical protein; Provisional	98.44
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.42
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.41
KOG0587|consensus	953		98.36
KOG0599|consensus	411		98.36
KOG0596|consensus	677		98.33
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.29
KOG0984|consensus	282		98.23
KOG0670|consensus	752		98.23
KOG4645|consensus	1509		98.16
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.15
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.07
KOG0200|consensus	609		98.07
KOG0604|consensus	400		98.06
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.06
KOG0671|consensus	415		98.05
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.05
KOG0669|consensus	376		98.03
KOG3653|consensus	534		98.02
KOG1163|consensus	341		98.0
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.95
KOG4721|consensus	904		97.86
PHA02882	294	putative serine/threonine kinase; Provisional	97.82
KOG1167|consensus	418		97.82
KOG1345|consensus	378		97.81
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.8
KOG0603|consensus	612		97.79
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	97.78
KOG1165|consensus	449		97.74
KOG1164|consensus	322		97.72
PRK14879	211	serine/threonine protein kinase; Provisional	97.71
KOG0664|consensus	449		97.67
smart00090	237	RIO RIO-like kinase.	97.65
KOG1027|consensus	903		97.64
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.43
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.29
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.28
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.22
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.11
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.08
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	96.83
PRK12274	218	serine/threonine protein kinase; Provisional	96.67
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.41
KOG1033|consensus	516		95.98
KOG0603|consensus	612		95.93
KOG0665|consensus	369		95.85
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.38
KOG1024|consensus	563		95.33
KOG1166|consensus	974		94.77
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	94.57
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.48
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	94.45
KOG1243|consensus	690		94.0
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	93.7
KOG0601|consensus	524		93.41
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	92.89
KOG0601|consensus	524		92.72
KOG0195|consensus	448		92.16
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	91.91
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	90.52
KOG0606|consensus	1205		89.32
COG0661	517	AarF Predicted unusual protein kinase [General fun	87.75
KOG0590|consensus	601		82.13
KOG3741|consensus	655		81.84
KOG1240|consensus	1431		80.46

>KOG0575|consensus

Probab=99.62  E-value=1.4e-15  Score=123.75  Aligned_cols=78  Identities=24%  Similarity=0.357  Sum_probs=74.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|+..++||+|+|..||.+.+..+ |..||+|+|.+..+......+++.+||+|++.| .|||||++|++|++.+++||
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~t-ge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDT-GEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCC-CcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEE
Confidence            5699999999999999999999888 999999999988777788899999999999999 99999999999999999996

>KOG0598|consensus

Probab=99.60  E-value=1.2e-15  Score=117.72  Aligned_cols=82  Identities=45%  Similarity=0.737  Sum_probs=76.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ....++|+++++||+|+||+|++++.+.+ ++.||+|++++..............|..||..+ .||+||.|+..|++.+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt-~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~   98 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDT-GKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEE   98 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEccc-CceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCC
Confidence            56689999999999999999999999988 999999999988877777888999999999999 9999999999999999


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      ++||
T Consensus        99 kLyl  102 (357)
T KOG0598|consen   99 KLYL  102 (357)
T ss_pred             eEEE
Confidence            9996

>KOG0605|consensus

Probab=99.57  E-value=3.4e-15  Score=120.08  Aligned_cols=85  Identities=36%  Similarity=0.654  Sum_probs=80.1

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ...++..++|+++++||+|+||.||+|..+.+ |..+|+|+|+++.+....+...+..|..||... ++++||+||+.|+
T Consensus       134 ~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~T-g~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQ  211 (550)
T KOG0605|consen  134 RRTRLSLDDFELLKVIGKGAFGEVRLARKKDT-GEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQ  211 (550)
T ss_pred             ccccCCcccchhheeeccccceeEEEEEEccC-CcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEec
Confidence            34467899999999999999999999999999 999999999999988889999999999999998 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      +.++|||
T Consensus       212 D~~~LYL  218 (550)
T KOG0605|consen  212 DKEYLYL  218 (550)
T ss_pred             CCCeeEE
Confidence            9999996

>KOG0580|consensus

Probab=99.57  E-value=9e-16  Score=112.70  Aligned_cols=85  Identities=29%  Similarity=0.390  Sum_probs=77.9

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+.+++|++++.||+|.||.||+++.+.+ +-.||+|++.++.+.......++.+|++|-..| .||||+++|++|.
T Consensus        15 ~~~~~~l~dfeigr~LgkgkFG~vYlarekks-~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fh   92 (281)
T KOG0580|consen   15 ATKTWTLDDFEIGRPLGKGKFGNVYLAREKKS-LFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFH   92 (281)
T ss_pred             cccccchhhccccccccCCccccEeEeeeccC-CcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhhee
Confidence            34678899999999999999999999999998 999999999888766667778899999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ++..+||
T Consensus        93 d~~riyL   99 (281)
T KOG0580|consen   93 DSKRIYL   99 (281)
T ss_pred             ccceeEE
Confidence            9999886

>KOG0595|consensus

Probab=99.56  E-value=6.9e-15  Score=115.00  Aligned_cols=79  Identities=24%  Similarity=0.387  Sum_probs=72.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ...+|.+.+.||.|+|++||+|+++.+ +..||||.|.+..+ .....+.+..|+.+|+.+ +|||||.|++++++++++
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~-~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i   84 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKS-GTEVAIKCIAKKKL-NKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFI   84 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccC-CceEEeeeehhhcc-CHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeE
Confidence            357899999999999999999999999 99999999988765 455677899999999999 999999999999999999


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        85 ~l   86 (429)
T KOG0595|consen   85 YL   86 (429)
T ss_pred             EE
Confidence            86

>KOG0694|consensus

Probab=99.56  E-value=5.6e-14  Score=115.93  Aligned_cols=84  Identities=56%  Similarity=0.921  Sum_probs=79.3

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+.+++|.++++||+|+||+|+++..+.+ ++.+|||++++.........+..+.|..|+.....||++++|+.+|++.
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~-~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~  441 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGT-NEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK  441 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCC-CcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence            578899999999999999999999999999 9999999999998888889999999999999996799999999999999


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +++|+
T Consensus       442 ~~l~f  446 (694)
T KOG0694|consen  442 EHLFF  446 (694)
T ss_pred             CeEEE
Confidence            99985

>KOG0615|consensus

Probab=99.53  E-value=3.4e-14  Score=111.42  Aligned_cols=80  Identities=23%  Similarity=0.287  Sum_probs=69.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc----cchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ----DDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~----~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+.|.+.+.||+|+||.|.+|..+.+ |+.||||+|++.....    ......+.+|++||++| +|||||+++++|+.
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~t-gk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKT-GKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEV  247 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEccc-CcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeec
Confidence            456789999999999999999999999 9999999998765432    12334578999999999 99999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      ++..||
T Consensus       248 ~ds~Ym  253 (475)
T KOG0615|consen  248 PDSSYM  253 (475)
T ss_pred             CCceEE
Confidence            998885

>KOG0592|consensus

Probab=99.42  E-value=7.2e-13  Score=107.09  Aligned_cols=84  Identities=36%  Similarity=0.540  Sum_probs=78.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ......||.+++.||+|+|++|++|..+.+ +..||||++.+..+..+...+.+.+|-.+|..|..||.||+||..|+++
T Consensus        68 ~kk~~~DF~Fg~~lGeGSYStV~~A~~~~t-~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~  146 (604)
T KOG0592|consen   68 EKKTPNDFKFGKILGEGSYSTVVLAREKAT-GKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE  146 (604)
T ss_pred             ccCChhhcchhheeccccceeEEEeeecCC-CceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc
Confidence            366788999999999999999999999999 9999999999988888888889999999999999999999999999999


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      ..|||
T Consensus       147 ~sLYF  151 (604)
T KOG0592|consen  147 ESLYF  151 (604)
T ss_pred             cceEE
Confidence            99996

>KOG0585|consensus

Probab=99.42  E-value=3.3e-13  Score=107.67  Aligned_cols=85  Identities=26%  Similarity=0.422  Sum_probs=71.7

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc-----------chhhhHHHHHHHHHHhcCC
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD-----------DDVDCTMTEKRILALAAKH  160 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~-----------~~~~~~~~Ei~il~~l~~h  160 (178)
                      ...+..++.|++++.||+|+||+|.+++...+ +..||||++.+..+...           ...+.+.+||.||++| .|
T Consensus        90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~-~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H  167 (576)
T KOG0585|consen   90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVD-GKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HH  167 (576)
T ss_pred             cccceehhheehhhhhcCCccceEEEEeecCC-CcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CC
Confidence            45678899999999999999999999999999 99999999987654211           1235799999999999 99


Q ss_pred             CCccccceeEEeCC--eEeC
Q psy1646         161 PFLTALHSCFQTKV--KCSF  178 (178)
Q Consensus       161 p~iv~l~~~~~~~~--~~yl  178 (178)
                      ||||+|+++..+.+  .+||
T Consensus       168 ~nVV~LiEvLDDP~s~~~Yl  187 (576)
T KOG0585|consen  168 PNVVKLIEVLDDPESDKLYL  187 (576)
T ss_pred             cCeeEEEEeecCcccCceEE
Confidence            99999999998753  5664

>KOG0597|consensus

Probab=99.41  E-value=1.1e-13  Score=112.55  Aligned_cols=77  Identities=27%  Similarity=0.471  Sum_probs=69.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+.+.||+|+||.||+|+.+.+ .+.||||.+.+..- .+...+.+.+|++|++.| .|||||.++++|++..++|+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t-~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~v   78 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYT-IQVVAIKFIDKSGR-NEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWV   78 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccc-eeEEEEEEehhcCC-chHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEE
Confidence            5788999999999999999999999 99999999987543 455678899999999999 99999999999999998874

>KOG0616|consensus

Probab=99.40  E-value=3.2e-13  Score=102.18  Aligned_cols=81  Identities=38%  Similarity=0.635  Sum_probs=76.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ..+++|+.+++||.|+||.|.+++++.+ |..+|+|++.+..+.+-.+.++..+|..+|+.+ .||+++.|++.|.+..+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~-g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~  118 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHS-GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSN  118 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccC-CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCe
Confidence            6689999999999999999999999999 999999999988877778889999999999999 99999999999999999


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       119 lym  121 (355)
T KOG0616|consen  119 LYM  121 (355)
T ss_pred             EEE
Confidence            986

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.39  E-value=8.4e-12  Score=98.96  Aligned_cols=82  Identities=22%  Similarity=0.303  Sum_probs=69.5

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .....+++|+.++.||+|+||.||++.+..+ +..||+|++....  .......+.+|+.++..+ .|+||++++++|..
T Consensus        68 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  143 (353)
T PLN00034         68 SAAKSLSELERVNRIGSGAGGTVYKVIHRPT-GRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDH  143 (353)
T ss_pred             CCCCCHHHHhhhhhccCCCCeEEEEEEECCC-CCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEecc
Confidence            3445678899999999999999999999988 9999999986542  334456789999999999 99999999999988


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+|+
T Consensus       144 ~~~~~l  149 (353)
T PLN00034        144 NGEIQV  149 (353)
T ss_pred             CCeEEE
Confidence            877764

>KOG0593|consensus

Probab=99.37  E-value=2.5e-13  Score=103.21  Aligned_cols=77  Identities=25%  Similarity=0.358  Sum_probs=65.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|+.+.++|+|+||.||+|+++.+ |+.||||.+--+. .+....+-.+|||.+|++| .|+|+|.|+++|.....+||
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~T-gqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhL   78 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDT-GQIVAIKKFVESE-DDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHL   78 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCc-ccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEE
Confidence            5688999999999999999999999 9999999875432 1344456789999999999 99999999999988777664

>KOG0659|consensus

Probab=99.37  E-value=5.6e-13  Score=99.50  Aligned_cols=76  Identities=25%  Similarity=0.378  Sum_probs=66.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+|...++||+|.||.||+|.+..+ |+.||||.|..... .++.-...+|||.+|+.+ +|+||+.|.++|...+++.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t-~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~   77 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTET-GKRVAIKKIKLGNA-KDGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLS   77 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCC-CcEEEEEEeecccc-ccCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceE
Confidence            4688899999999999999999999 99999999987654 445556789999999999 9999999999998766543

>KOG0032|consensus

Probab=99.35  E-value=2.7e-12  Score=102.68  Aligned_cols=81  Identities=25%  Similarity=0.377  Sum_probs=70.9

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ....|++.+.||.|.||.||+|..+.+ |..+|+|+|.+..+........+.+|+.+|..+..|||||.+++.|++...+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~t-g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKST-GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCC-CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            345699999999999999999999999 9999999998876544445678999999999993499999999999999987


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus       112 ~l  113 (382)
T KOG0032|consen  112 YL  113 (382)
T ss_pred             EE
Confidence            75

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.35  E-value=5.3e-12  Score=99.23  Aligned_cols=84  Identities=37%  Similarity=0.610  Sum_probs=72.3

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.+++|++.+.||+|+||.||+|.+..+ +..||+|++.+...........+.+|+.++..+ .||||++++++|..
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   89 (329)
T PTZ00263         12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGT-GEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQD   89 (329)
T ss_pred             cCCCCchheEEEEEEEecCCeEEEEEEECCC-CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEc
Confidence            3456678999999999999999999999988 999999999865433344566789999999999 99999999999998


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        90 ~~~~~l   95 (329)
T PTZ00263         90 ENRVYF   95 (329)
T ss_pred             CCEEEE
Confidence            888774

>KOG0581|consensus

Probab=99.34  E-value=7.7e-12  Score=97.00  Aligned_cols=82  Identities=24%  Similarity=0.410  Sum_probs=72.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.+++++.+++||+|+.|+||++.|+.+ ++.+|+|+|...  .+....+++.+|+++++.+ +|||||.+|++|..
T Consensus        73 ~~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t-~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~  148 (364)
T KOG0581|consen   73 DNGISLSDLERLGVLGSGNGGTVYKVRHKPT-GKIYALKVILLN--IDPALQKQILRELEILRSC-QSPYIVGFYGAFYS  148 (364)
T ss_pred             ccccCHHHhhhhhhcccCCCcEEEEEEEcCC-CeEEEEEeeccc--CCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEe
Confidence            3456778999999999999999999999999 999999999543  2567788999999999999 99999999999999


Q ss_pred             CCe-EeC
Q psy1646         173 KVK-CSF  178 (178)
Q Consensus       173 ~~~-~yl  178 (178)
                      ... ++|
T Consensus       149 ~~~~isI  155 (364)
T KOG0581|consen  149 NGEEISI  155 (364)
T ss_pred             CCceEEe
Confidence            884 654

>KOG0600|consensus

Probab=99.34  E-value=8.7e-13  Score=105.81  Aligned_cols=81  Identities=21%  Similarity=0.300  Sum_probs=70.0

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC-
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK-  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~-  173 (178)
                      ....+.|+.++.||+|.||.||++++..+ |..||+|.++.... ++.......|||.||++| +||||++|.+..... 
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~t-gkivALKKvr~d~~-~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~  189 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLET-GKIVALKKVRFDNE-KEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKL  189 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeeccc-CcEEEEEEeecccC-CCcchHHHHHHHHHHHhc-CCCcccceeeEEEecC
Confidence            34567799999999999999999999999 99999999986643 566677889999999999 999999999987765 


Q ss_pred             -CeEeC
Q psy1646         174 -VKCSF  178 (178)
Q Consensus       174 -~~~yl  178 (178)
                       ..+||
T Consensus       190 ~~siYl  195 (560)
T KOG0600|consen  190 SGSIYL  195 (560)
T ss_pred             CceEEE
Confidence             56665

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.33  E-value=5.1e-12  Score=101.26  Aligned_cols=77  Identities=36%  Similarity=0.509  Sum_probs=68.2

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|++++.||+|+||.||++.+..+ +..||+|++.+..+........+.+|+.++..+ .|+||++++++|.+.+++||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~l   78 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDT-HALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYF   78 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEE
Confidence            689999999999999999999988 999999999876543445567899999999999 99999999999999888774

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=6.9e-12  Score=99.68  Aligned_cols=78  Identities=35%  Similarity=0.620  Sum_probs=67.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||++.+..+ +..||||++.+...........+.+|+.+|..+ .|+||+.++++|.+.+.+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~l   78 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDT-GHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYL   78 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEE
Confidence            4799999999999999999999988 999999999865433344556788999999999 99999999999999888775

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=7.8e-12  Score=99.96  Aligned_cols=78  Identities=35%  Similarity=0.620  Sum_probs=67.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+++.||+|+||.||++....+ +..||+|++.+...........+.+|+.++..+ .|||||+++++|.+.+.+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~l   78 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDT-GKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYL   78 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCC-CCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEE
Confidence            4799999999999999999999988 999999998765432344566788999999999 99999999999998888775

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0610|consensus

Probab=99.30  E-value=7.8e-12  Score=98.33  Aligned_cols=85  Identities=35%  Similarity=0.632  Sum_probs=78.0

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+.+++|++++.||.|.-|.||++..+.+ +..+|+|++.+..+.......++..|.+||..+ +||+++.||..|+
T Consensus        70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t-~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fe  147 (459)
T KOG0610|consen   70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGT-NCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFE  147 (459)
T ss_pred             CCCccCHHHHHHHHHcCCCCceeEEEEEecCC-CceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheee
Confidence            45667889999999999999999999999998 899999999998887777888999999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      .++.+||
T Consensus       148 t~~~~cl  154 (459)
T KOG0610|consen  148 TDKYSCL  154 (459)
T ss_pred             ccceeEE
Confidence            9988775

>KOG0591|consensus

Probab=99.30  E-value=2.2e-13  Score=102.63  Aligned_cols=79  Identities=20%  Similarity=0.342  Sum_probs=68.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce-eEEe
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS-CFQT  172 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~-~~~~  172 (178)
                      ....+.+|+++++||+|+||.||++.+..+ |..+|.|.|+-..+ +.........|+.+|++| +|||||++|+ .|..
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~-g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~   90 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLD-GKLVALKKIQFGMM-DAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIE   90 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccC-cchhhhhhcchhhc-cHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhc
Confidence            566788999999999999999999999999 99999999985443 666778899999999999 9999999998 4544


Q ss_pred             CCe
Q psy1646         173 KVK  175 (178)
Q Consensus       173 ~~~  175 (178)
                      ++.
T Consensus        91 ~~e   93 (375)
T KOG0591|consen   91 DNE   93 (375)
T ss_pred             cch
Confidence            443

>KOG0582|consensus

Probab=99.30  E-value=2.4e-11  Score=96.46  Aligned_cols=83  Identities=23%  Similarity=0.373  Sum_probs=73.7

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .......++|++..+||.|..+.||++++..+ +..||||+++.++..  ...+.+.+|+..|..+ +||||+.++.+|.
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~-~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~-~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPT-NEVVAIKIINLEKCN--NDLDALRKEVQTMSLI-DHPNIVTYHCSFV   94 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeeccc-CCEEEEEEeehhhhh--hhHHHHHHHHHHhhhc-CCCCcceEEEEEE
Confidence            34456678999999999999999999999999 999999999987652  2378899999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      .+..+|+
T Consensus        95 v~~~LWv  101 (516)
T KOG0582|consen   95 VDSELWV  101 (516)
T ss_pred             ecceeEE
Confidence            9999885

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.29  E-value=1.1e-11  Score=99.22  Aligned_cols=77  Identities=36%  Similarity=0.513  Sum_probs=67.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|+++++||+|+||.||++.+..+ +..+|+|++.+...........+.+|+.++..+ .|+|||+++++|.+.+.+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~l   78 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDT-KALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYF   78 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCC-CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEE
Confidence            589999999999999999999988 999999999865433345567889999999999 99999999999999888775

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0611|consensus

Probab=99.29  E-value=5.2e-13  Score=105.16  Aligned_cols=78  Identities=29%  Similarity=0.462  Sum_probs=71.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .-+|++.+.||+|.||+|.++..... |+.||||.|++.....+...-++.+||+||..| +||||+.+|++|+..+.+.
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~s-gR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKS-GREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccC-CcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEE
Confidence            34699999999999999999999888 999999999988876778888999999999999 9999999999999877654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.29  E-value=1.2e-11  Score=98.78  Aligned_cols=78  Identities=32%  Similarity=0.485  Sum_probs=67.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.+|..+ .|+||+++++.|...+.+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~l   78 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDT-NALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYF   78 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCC-CCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEE
Confidence            4799999999999999999999988 999999999764432334456788999999999 99999999999998888775

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.27  E-value=1.8e-11  Score=97.42  Aligned_cols=78  Identities=33%  Similarity=0.615  Sum_probs=67.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ +|+||+++++.|.+...+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~l   78 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDT-GHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYL   78 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCC-CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEE
Confidence            4799999999999999999999988 999999999865433344556788999999999 99999999999998888775

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=1.3e-11  Score=95.37  Aligned_cols=78  Identities=31%  Similarity=0.458  Sum_probs=66.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||+|+||.||++.+..+ +..+|+|++.............+.+|+.++..+ .||||+++++++.+.+.+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l   78 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRIS-EHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYM   78 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCC-CCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEE
Confidence            4689999999999999999999988 999999999765432334456788999999999 99999999999988877764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0586|consensus

Probab=99.25  E-value=3.9e-11  Score=98.26  Aligned_cols=83  Identities=25%  Similarity=0.340  Sum_probs=73.3

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ........|.+.+.||+|.|+.|.++.+..+ +..||||+|.+..+ +...+..+.+|+++|..| .|||||+|+.+.+.
T Consensus        50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t-~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t  126 (596)
T KOG0586|consen   50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILT-GTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSL-NHPNIVKLFSVIET  126 (596)
T ss_pred             cccccccceeeeeeeccceeEEEEeeEecCC-CceEEEEEehhccc-ChHHHHHHHHHHHHHHhc-CCcceeeeeeeeee
Confidence            3445567899999999999999999999999 99999999998765 444556699999999999 99999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      +..+|+
T Consensus       127 ~~~lyl  132 (596)
T KOG0586|consen  127 EATLYL  132 (596)
T ss_pred             cceeEE
Confidence            998885

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.25  E-value=4.2e-11  Score=94.72  Aligned_cols=86  Identities=35%  Similarity=0.590  Sum_probs=70.6

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+..++|++.+.||+|+||.||+|.+....+..+|+|.+.+...........+.+|+.++..+ .||||++++++|.
T Consensus        23 ~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~  101 (340)
T PTZ00426         23 RKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFK  101 (340)
T ss_pred             cCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEE
Confidence            345567889999999999999999999877551368999998765433344566789999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus       102 ~~~~~~l  108 (340)
T PTZ00426        102 DESYLYL  108 (340)
T ss_pred             eCCEEEE
Confidence            9888774

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=2.8e-11  Score=95.16  Aligned_cols=78  Identities=31%  Similarity=0.563  Sum_probs=67.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||+|.+..+ +..||+|++.+...........+.+|+.++..+ .||||++++++|...+.+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDT-GEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCC-CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEE
Confidence            3699999999999999999999988 999999999865432334556789999999999 99999999999998888775

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.25  E-value=3.6e-11  Score=92.66  Aligned_cols=78  Identities=19%  Similarity=0.339  Sum_probs=66.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++.++||.|+||.||+|.+..+ +..||+|++....  .......+.+|+.++..+ .||||+++++++...+.+
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~   78 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLT-ENLVALKEIRLEH--EEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCL   78 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCC-CCEEEEEEecccc--cCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeE
Confidence            467899999999999999999999988 9999999987542  223345678999999999 999999999999887766


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        79 ~l   80 (288)
T cd07871          79 TL   80 (288)
T ss_pred             EE
Confidence            54

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG4236|consensus

Probab=99.25  E-value=1.1e-11  Score=100.47  Aligned_cols=75  Identities=28%  Similarity=0.355  Sum_probs=67.2

Q ss_pred             eEE--EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHF--IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~--~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |++  .++||.|.||+||-|.++.+ |+.||||+|.+.++ .......+.+|++||..+ .||.||.|-.+|++.+++|+
T Consensus       564 YQif~devLGSGQFG~VYgg~hRkt-GrdVAvKvIdKlrF-p~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFV  640 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKT-GRDVAVKVIDKLRF-PTKQESQLRNEVAILQNL-HHPGIVNLECMFETPERVFV  640 (888)
T ss_pred             HHhhhHhhccCCcceeeecceeccc-CceeeeeeeecccC-CCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEE
Confidence            444  58999999999999999999 99999999998887 445568899999999999 99999999999999998873

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=3.6e-11  Score=94.60  Aligned_cols=78  Identities=29%  Similarity=0.621  Sum_probs=67.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .|+||+.++++|...+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNT-GQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYL   78 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCC-CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEE
Confidence            4799999999999999999999988 999999999864433344556788999999999 99999999999999888775

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0583|consensus

Probab=99.23  E-value=4.4e-11  Score=95.56  Aligned_cols=83  Identities=28%  Similarity=0.408  Sum_probs=69.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc--chhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD--DDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~--~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ......|.+++.||+|+||+|+++.+..+ +..||+|++++......  ...+.+.+|+.+++.+..||||+++++++..
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t-~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLT-GEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccC-CCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            35567899999999999999999999999 99999998877533211  3456777999999999339999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      ...+||
T Consensus        92 ~~~~~i   97 (370)
T KOG0583|consen   92 PTKIYI   97 (370)
T ss_pred             CCeEEE
Confidence            988875

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.22  E-value=3.7e-11  Score=96.04  Aligned_cols=83  Identities=35%  Similarity=0.561  Sum_probs=70.4

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|++.+.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||+.++++|.+.
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~  115 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSS-KQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDD  115 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecC
Confidence            345678899999999999999999999988 999999999765433334455688999999999 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       116 ~~~~l  120 (370)
T cd05596         116 KYLYM  120 (370)
T ss_pred             CEEEE
Confidence            87774

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.22  E-value=5.9e-11  Score=92.04  Aligned_cols=77  Identities=21%  Similarity=0.352  Sum_probs=65.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++.+.||+|+||.||+|....+ +..+|+|++....  .......+.+|+.+++.+ .||||+.+++++.+.+.+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   79 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVN-GKLVALKVIRLQE--EEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLT   79 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCC-CCEEEEEEecccc--ccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEE
Confidence            46799999999999999999999988 9999999987542  223345678999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        80 l   80 (303)
T cd07869          80 L   80 (303)
T ss_pred             E
Confidence            4

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0588|consensus

Probab=99.22  E-value=1.1e-11  Score=102.38  Aligned_cols=79  Identities=25%  Similarity=0.350  Sum_probs=71.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+-|++++.||.|+.|.|.+|.+..+ |+..|||+|.++..........+.+||.||+.+ .|||++.||++|+...++|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~T-GqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAET-GQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccc-cceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEE
Confidence            45699999999999999999999999 999999999987444666678899999999999 9999999999999999988


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        89 l   89 (786)
T KOG0588|consen   89 L   89 (786)
T ss_pred             E
Confidence            5

>KOG0194|consensus

Probab=99.22  E-value=3.2e-11  Score=98.03  Aligned_cols=83  Identities=22%  Similarity=0.308  Sum_probs=67.2

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCC---e-EEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE---V-YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~---~-~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ..+.-++..+.++||+|+||.||+|..+.. +.   . ||+|....+..........+++|..+|+.+ +|||||++|++
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~-~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGV  229 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLK-NGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGV  229 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEec-CCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEE
Confidence            334456677779999999999999998754 32   3 899988753323567788999999999999 99999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      ..++..+||
T Consensus       230 a~~~~Pl~i  238 (474)
T KOG0194|consen  230 AVLEEPLML  238 (474)
T ss_pred             EcCCCccEE
Confidence            998888775

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.20  E-value=6.6e-11  Score=94.07  Aligned_cols=78  Identities=31%  Similarity=0.598  Sum_probs=67.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||++.+..+ +..+|+|++.............+.+|+.++..+ .|+||+++++.|.+.+.+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~l   78 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDT-GHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYL   78 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEE
Confidence            4699999999999999999999988 999999999865433344566788999999999 99999999999998888775

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0690|consensus

Probab=99.20  E-value=4.7e-12  Score=97.39  Aligned_cols=85  Identities=51%  Similarity=0.887  Sum_probs=77.5

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+.+++|+.+++||+|.||+|.+|+.+.+ ++.||||++++...........-+.|-.+|..+ .||++..|.+.|+
T Consensus       161 ~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat-~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQ  238 (516)
T KOG0690|consen  161 RKNKVTMEDFDFLKVLGKGTFGKVILCREKAT-GKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQ  238 (516)
T ss_pred             ccceeccchhhHHHHhcCCccceEEEEeeccc-CceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhc
Confidence            34567899999999999999999999999999 999999999988777777778889999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+++|+
T Consensus       239 t~drlCF  245 (516)
T KOG0690|consen  239 TQDRLCF  245 (516)
T ss_pred             cCceEEE
Confidence            9998875

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=5.2e-11  Score=94.01  Aligned_cols=78  Identities=36%  Similarity=0.646  Sum_probs=67.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+++.||+|+||.||+|.+..+ +..||+|++.+...........+..|+.++..+ .|+||++++++|.+.+++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDT-GQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYL   78 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCC-CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEE
Confidence            4699999999999999999999988 999999999865443345567789999999999 99999999999998887764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.20  E-value=6.8e-11  Score=90.98  Aligned_cols=76  Identities=33%  Similarity=0.534  Sum_probs=64.4

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |+..+.||+|+||.||++.+..+ +..||+|.+.+...........+.+|+.++..+ .|+||+.++++|.+.+.+|+
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~l   77 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRAT-GKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecC-CceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEE
Confidence            78899999999999999999988 999999998765432233345688999999999 99999999999988877664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.20  E-value=1.2e-10  Score=91.61  Aligned_cols=79  Identities=20%  Similarity=0.317  Sum_probs=68.1

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++++.||+|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .||||++++++|...+.
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   77 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPS-GLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGE   77 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCC-CcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCE
Confidence            3467899999999999999999999988 9999999987542  234456799999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        78 ~~l   80 (331)
T cd06649          78 ISI   80 (331)
T ss_pred             EEE
Confidence            764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG1152|consensus

Probab=99.19  E-value=2.3e-11  Score=99.38  Aligned_cols=81  Identities=25%  Similarity=0.389  Sum_probs=70.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-----ccchhhhHHHHHHHHHHhcC---CCCccccc
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-----QDDDVDCTMTEKRILALAAK---HPFLTALH  167 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~~---hp~iv~l~  167 (178)
                      ..+.+|..+..||.|+||+|++|.++.. .-.|.||.|.+++..     +......+..||.||..| .   |+||++++
T Consensus       558 ~k~s~yttlq~lG~GAyGkV~lai~K~n-~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlL  635 (772)
T KOG1152|consen  558 KKFSDYTTLQPLGEGAYGKVNLAIHKEN-NYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLL  635 (772)
T ss_pred             cccccceeeeeccccccceEEEeeeccc-ceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhh
Confidence            4567899999999999999999999988 889999999876642     344556789999999999 6   99999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      ++|++++++||
T Consensus       636 dfFEddd~yyl  646 (772)
T KOG1152|consen  636 DFFEDDDYYYL  646 (772)
T ss_pred             heeecCCeeEE
Confidence            99999999986

>KOG4717|consensus

Probab=99.19  E-value=8.2e-12  Score=101.03  Aligned_cols=78  Identities=28%  Similarity=0.362  Sum_probs=71.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..-|.+.+.||+|.|..|.++++.-+ |..||||+|.+.++ +.....++.+|+..|+.+ +|||||+||++..++..+|
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFT-GekVAVKviDKTKl-D~~st~hlfqEVRCMKLV-QHpNiVRLYEViDTQTKly   93 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFT-GEKVAVKVIDKTKL-DTLSTGHLFQEVRCMKLV-QHPNIVRLYEVIDTQTKLY   93 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcc-cceeEEEEeccccc-chhhhhHHHHHHHHHHHh-cCcCeeeeeehhcccceEE
Confidence            45699999999999999999999989 99999999998877 556677899999999999 9999999999999998888


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        94 L   94 (864)
T KOG4717|consen   94 L   94 (864)
T ss_pred             E
Confidence            6

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.19  E-value=9.2e-11  Score=90.03  Aligned_cols=77  Identities=22%  Similarity=0.433  Sum_probs=66.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||+|+||.||++.+..+ +..+|+|++..... .......+.+|+.++..+ .|+||++++++|...+.+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   77 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKET-KEIVAIKKFKDSEE-NEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYL   77 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCC-CcEEEEEEEecccc-cccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEE
Confidence            3699999999999999999999988 99999999875432 234456788999999999 99999999999988887764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.19  E-value=7.1e-11  Score=94.47  Aligned_cols=82  Identities=33%  Similarity=0.588  Sum_probs=69.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ....++|++.+.||+|+||.||++.+..+ +..+|+|++.+...........+.+|+.++..+ .||||++++++|.+.+
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~  116 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSS-QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDK  116 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCC
Confidence            34567899999999999999999999988 999999999764333334455688999999999 9999999999999888


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       117 ~~~l  120 (370)
T cd05621         117 YLYM  120 (370)
T ss_pred             EEEE
Confidence            8774

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=7.8e-11  Score=90.64  Aligned_cols=77  Identities=31%  Similarity=0.514  Sum_probs=64.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|++.++||+|+||.||++.+..+ +..||+|++.............+.+|+.+++.+ +|+||+.++++|...+.+||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   77 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRAT-GKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCC-CceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEE
Confidence            388999999999999999999888 899999999765432233345678999999999 99999999999988877764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.19  E-value=8.3e-11  Score=94.07  Aligned_cols=83  Identities=31%  Similarity=0.560  Sum_probs=70.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|++.+.||+|+||.||++.+..+ +..+|+|++.+...........+.+|+.++..+ .||||++++++|...
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~  115 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKST-RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDD  115 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCC-CcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcC
Confidence            345668999999999999999999999988 999999999764333334455688999999999 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       116 ~~~~l  120 (371)
T cd05622         116 RYLYM  120 (371)
T ss_pred             CEEEE
Confidence            87764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.18  E-value=1.6e-10  Score=89.90  Aligned_cols=78  Identities=18%  Similarity=0.338  Sum_probs=66.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|.+++.||+|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .|+||+++++++...+.+
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   79 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLT-ENLVALKEIRLEH--EEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSL   79 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCC-CCeEEEEEeeccc--cCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeE
Confidence            357899999999999999999999888 8999999987543  223345678999999999 999999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        80 ~l   81 (309)
T cd07872          80 TL   81 (309)
T ss_pred             EE
Confidence            64

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.18  E-value=1.6e-10  Score=89.51  Aligned_cols=78  Identities=21%  Similarity=0.348  Sum_probs=66.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|.+.+.||.|+||.||++.+..+ +..||+|.+....  .......+.+|+.++..+ +|+||+++++++...+.+
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~   79 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLT-DNLVALKEIRLEH--EEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSL   79 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCC-CcEEEEEEEeccc--ccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeE
Confidence            467899999999999999999999888 8999999987542  223345678999999999 999999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        80 ~l   81 (301)
T cd07873          80 TL   81 (301)
T ss_pred             EE
Confidence            64

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.18  E-value=1e-10  Score=92.08  Aligned_cols=78  Identities=29%  Similarity=0.612  Sum_probs=66.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+++.||+|+||.||++.+..+ +..+|+|++.+...........+..|+.++..+ .|+||+.++++|...+.+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~l   78 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHT-ERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYL   78 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEE
Confidence            4799999999999999999999988 999999999764332334455688899999999 99999999999998888775

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.17  E-value=1.6e-10  Score=87.60  Aligned_cols=79  Identities=19%  Similarity=0.246  Sum_probs=66.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++.+.||+|+||.||++....+ +..+|+|.+.............+.+|+.+++.+ .||||+++++++.+.+.+|
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~~~-~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCLLD-RKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELN   78 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEeCC-CCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEE
Confidence            36799999999999999999999988 999999988754333344556789999999999 9999999999998877766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        79 ~   79 (267)
T cd08228          79 I   79 (267)
T ss_pred             E
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.16  E-value=1.5e-10  Score=91.15  Aligned_cols=79  Identities=20%  Similarity=0.320  Sum_probs=67.8

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++.+.||.|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ +|+||++++++|...++
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   77 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHKPS-GLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGE   77 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEECCC-CcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCE
Confidence            3457899999999999999999999988 8999999887542  233456789999999999 99999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        78 ~~l   80 (333)
T cd06650          78 ISI   80 (333)
T ss_pred             EEE
Confidence            774

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0663|consensus

Probab=99.16  E-value=3.2e-11  Score=92.85  Aligned_cols=84  Identities=23%  Similarity=0.298  Sum_probs=69.4

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      -..+...+.|+.++.|++|.||.||+|.++.+ +..||+|.++-.. ..++..-..+|||.+|.++ +|||||.+..+..
T Consensus        69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t-~eIVALKr~kmek-ek~GFPItsLREIniLl~~-~H~NIV~vkEVVv  145 (419)
T KOG0663|consen   69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKT-DEIVALKRLKMEK-EKEGFPITSLREINILLKA-RHPNIVEVKEVVV  145 (419)
T ss_pred             ccCcccHHHHHHHhhcccCcceeEEEeccCCc-ceeEEeeeccccc-ccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEe
Confidence            45567788899999999999999999999999 9999999997543 2445555789999999999 9999999998876


Q ss_pred             eC--CeEeC
Q psy1646         172 TK--VKCSF  178 (178)
Q Consensus       172 ~~--~~~yl  178 (178)
                      ..  +.+||
T Consensus       146 G~~~d~iy~  154 (419)
T KOG0663|consen  146 GSNMDKIYI  154 (419)
T ss_pred             ccccceeee
Confidence            43  34554

>KOG0695|consensus

Probab=99.14  E-value=6.5e-11  Score=91.60  Aligned_cols=86  Identities=42%  Similarity=0.830  Sum_probs=78.2

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+.+.+|.++++||+|+|.+|.+++++.+ .+.||+|+++++.+.+...+..+..|-.++...++||++|-|+.+|+
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t-~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq  321 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKT-DQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ  321 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehccc-ceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc
Confidence            34457789999999999999999999999999 99999999998887777788889999999999889999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ++.++|+
T Consensus       322 tesrlff  328 (593)
T KOG0695|consen  322 TESRLFF  328 (593)
T ss_pred             ccceEEE
Confidence            9998875

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.13  E-value=2.4e-10  Score=92.05  Aligned_cols=72  Identities=19%  Similarity=0.255  Sum_probs=62.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +....|++++.||+|+||.||+|.+..+ ++.||+|....         ..+.+|+.++..+ .|||||+++++|.....
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~-~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~  157 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKT-CEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKF  157 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCC-CCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCe
Confidence            4557799999999999999999999988 99999996542         2467999999999 99999999999988776


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +|+
T Consensus       158 ~~l  160 (391)
T PHA03212        158 TCL  160 (391)
T ss_pred             eEE
Confidence            653

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.13  E-value=1.6e-10  Score=90.53  Aligned_cols=72  Identities=51%  Similarity=0.862  Sum_probs=61.7

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~l   72 (323)
T cd05571           1 KLLGKGTFGKVILVREKAT-GKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCF   72 (323)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEE
Confidence            4799999999999999988 999999999865433344556788999999999 99999999999998888775

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.13  E-value=2.3e-10  Score=89.83  Aligned_cols=78  Identities=29%  Similarity=0.633  Sum_probs=66.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+.+.||+|+||.||++.+..+ +..+|+|++.............+..|+.++..+ .|+||+.++++|...+.+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~l   78 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKAT-GDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYL   78 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEE
Confidence            4699999999999999999999988 999999999865432334556788999999999 99999999999998887764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0667|consensus

Probab=99.13  E-value=1.5e-10  Score=95.33  Aligned_cols=74  Identities=30%  Similarity=0.461  Sum_probs=64.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC-----CccccceeEEeCC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP-----FLTALHSCFQTKV  174 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp-----~iv~l~~~~~~~~  174 (178)
                      +|+++++||+|.||+|.+|++..+ ++.||||+|+..    .....+...|+.||..|..|.     |+|+++++|...+
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T-~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~  261 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKT-GEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN  261 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCC-CcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence            588999999999999999999999 999999999754    345677889999999994233     8999999999999


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      ++||
T Consensus       262 Hlci  265 (586)
T KOG0667|consen  262 HLCI  265 (586)
T ss_pred             ceee
Confidence            9886

>KOG0662|consensus

Probab=99.13  E-value=4.6e-11  Score=85.12  Aligned_cols=75  Identities=23%  Similarity=0.395  Sum_probs=65.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..|..+++||+|.||+|++++.+.+ .+.||+|.++...- +++.....++||.+++.+ .|.|||+|+++...++.+
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t-~eivalkrvrlddd-degvpssalreicllkel-khknivrl~dvlhsdkkl   76 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRET-HEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKL   76 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCc-cceEEEEEEeccCC-CCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCcee
Confidence            3577788999999999999999999 99999999986543 566677899999999999 999999999988777654

>KOG1035|consensus

Probab=99.12  E-value=1.2e-11  Score=107.84  Aligned_cols=72  Identities=28%  Similarity=0.427  Sum_probs=63.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      -+.+|+.+.+||+|+||.||+++++-+ |..||||.|+...  ......++.+|+.+|.+| +|||||++|..|..
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlD-Gr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVE  548 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLD-GREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVE  548 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeeccc-chhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhc
Confidence            467899999999999999999999999 9999999998653  345567899999999999 99999999988753

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.12  E-value=3.4e-10  Score=98.71  Aligned_cols=79  Identities=22%  Similarity=0.283  Sum_probs=67.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|+++++||+|+||.||+|.+..+ +..||+|++............++.+|+.++..+ .||||+++++++...+.+|
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~t-g~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~ly   78 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVC-SRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVY   78 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCC-CcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEE
Confidence            36899999999999999999999988 999999999754322234456799999999999 9999999999998887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        79 L   79 (932)
T PRK13184         79 Y   79 (932)
T ss_pred             E
Confidence            4

>KOG1094|consensus

Probab=99.12  E-value=6.6e-10  Score=91.19  Aligned_cols=78  Identities=27%  Similarity=0.392  Sum_probs=66.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...+...+++.||+|.||.|.+|....  +..||+|.++...  .......|..||++|.+| .|||||.|.++|..++.
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg--~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DeP  609 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEG--PLKVAVKILRPDA--TKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDP  609 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecC--ceEEEEeecCccc--chhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCc
Confidence            345667889999999999999999873  4789999998654  345568899999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      ++|
T Consensus       610 icm  612 (807)
T KOG1094|consen  610 LCM  612 (807)
T ss_pred             hHH
Confidence            764

>KOG1026|consensus

Probab=99.12  E-value=2.4e-11  Score=102.60  Aligned_cols=83  Identities=29%  Similarity=0.394  Sum_probs=69.4

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      -.++...+.++.+.||+|.||+||++.....    ....||||.++...  .......|.||+++|..+ +|||||+|++
T Consensus       480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l-~H~nIVrLlG  556 (774)
T KOG1026|consen  480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAEL-QHPNIVRLLG  556 (774)
T ss_pred             eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhc-cCCCeEEEEE
Confidence            3456778899999999999999999987532    03589999998653  445788999999999999 9999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|...+.+||
T Consensus       557 VC~~~~P~~M  566 (774)
T KOG1026|consen  557 VCREGDPLCM  566 (774)
T ss_pred             EEccCCeeEE
Confidence            9998888775

>KOG0612|consensus

Probab=99.11  E-value=3.8e-12  Score=110.21  Aligned_cols=82  Identities=29%  Similarity=0.624  Sum_probs=76.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++..++|+++++||+|+||.|.+++++.+ +..||+|+++++.+........|..|..||... +.++||.|+++|++++
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t-~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKST-EKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDER  148 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeecc-ccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCcc
Confidence            45678999999999999999999999999 999999999998887777788899999999988 9999999999999999


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      ++||
T Consensus       149 ~LYl  152 (1317)
T KOG0612|consen  149 YLYL  152 (1317)
T ss_pred             ceEE
Confidence            9996

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.11  E-value=4.2e-10  Score=96.41  Aligned_cols=79  Identities=35%  Similarity=0.603  Sum_probs=69.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|.+++.||+|+||.||+|.+..+ +..||||++.............+..|+.++..+ .|+||++++.++...+++|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~-~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~   80 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNN-SKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVY   80 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCC-CcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEE
Confidence            67899999999999999999999988 999999999865443445567889999999999 9999999999998888777


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        81 l   81 (669)
T cd05610          81 L   81 (669)
T ss_pred             E
Confidence            5

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.11  E-value=2.7e-10  Score=89.67  Aligned_cols=78  Identities=31%  Similarity=0.636  Sum_probs=66.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|+++++||+|+||.||++.+..+ +..+|+|++.+...........+..|+.++..+ .|+||+.++++|.+.+.+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNA-DKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYL   78 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCC-CCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEE
Confidence            4799999999999999999999988 899999999764332334445688899999999 99999999999998887774

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.11  E-value=2.4e-10  Score=88.56  Aligned_cols=78  Identities=26%  Similarity=0.341  Sum_probs=62.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeC----------------CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRG----------------SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH  160 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~----------------~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~h  160 (178)
                      ..++|.+.++||+|+||.||+|.+..                . +..||+|.+....  .......+.+|+.++..+ .|
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h   78 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGR-PLLVAVKILRPDA--NKNARNDFLKEVKILSRL-KD   78 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCc-ceEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CC
Confidence            35689999999999999999997532                2 3479999987542  234456799999999999 99


Q ss_pred             CCccccceeEEeCCeEeC
Q psy1646         161 PFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       161 p~iv~l~~~~~~~~~~yl  178 (178)
                      |||++++++|...+.+||
T Consensus        79 ~niv~~~~~~~~~~~~~l   96 (304)
T cd05096          79 PNIIRLLGVCVDEDPLCM   96 (304)
T ss_pred             CCeeEEEEEEecCCceEE
Confidence            999999999988776653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.11  E-value=2.6e-10  Score=89.41  Aligned_cols=76  Identities=50%  Similarity=0.862  Sum_probs=62.5

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHH---HhcCCCCccccceeEEeCCeEe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA---LAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~---~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      |.+++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++.   .+ .||||++++++|...+.+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKT-GELYAIKALKKGDIIARDEVESLMCEKRIFETANSE-RHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEcCCEEE
Confidence            67899999999999999999988 9999999998654323444567788877664   45 7999999999999888877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        79 l   79 (324)
T cd05589          79 F   79 (324)
T ss_pred             E
Confidence            5

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0661|consensus

Probab=99.11  E-value=1e-11  Score=99.16  Aligned_cols=79  Identities=25%  Similarity=0.397  Sum_probs=66.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC-e
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV-K  175 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~-~  175 (178)
                      ..++|.+++.||.|.||.||++....+ +..||||.+++...  ......-+||+..|++|..|||||+|++++.+.+ .
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~-~~~VAIK~MK~Kf~--s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~   84 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKET-GELVAIKKMKKKFY--SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI   84 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCC-CceeeHHHHHhhhc--cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence            356799999999999999999999988 99999999976532  2334567899999999933999999999999887 6


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        85 L~f   87 (538)
T KOG0661|consen   85 LYF   87 (538)
T ss_pred             Eee
Confidence            765

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.11  E-value=4.2e-10  Score=86.67  Aligned_cols=78  Identities=45%  Similarity=0.775  Sum_probs=67.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+.+.||+|+||.||++.+..+ ++.+|+|.+.............+.+|+.++..+ +||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   78 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGS-GKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYL   78 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEE
Confidence            4699999999999999999999988 999999999765443344567789999999999 99999999999988877764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.10  E-value=5.6e-10  Score=97.92  Aligned_cols=80  Identities=21%  Similarity=0.390  Sum_probs=68.0

Q ss_pred             CCCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          91 GGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        91 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      .......+.+|++++.||+|+||.||++.+..+ +..+|+|++....+ .......+..|+.+|..| .|||||+++++|
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~t-g~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f   81 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRT-QEFFCWKAISYRGL-KEREKSQLVIEVNVMREL-KHKNIVRYIDRF   81 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCC-CeEEEEEEEecccc-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEE
Confidence            345566778999999999999999999999988 99999999876543 344567789999999999 999999999988


Q ss_pred             EeC
Q psy1646         171 QTK  173 (178)
Q Consensus       171 ~~~  173 (178)
                      ...
T Consensus        82 ~de   84 (1021)
T PTZ00266         82 LNK   84 (1021)
T ss_pred             Eec
Confidence            653

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.10  E-value=4.5e-10  Score=86.02  Aligned_cols=76  Identities=25%  Similarity=0.371  Sum_probs=64.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|+++++||+|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .||||++++++|...+.+|+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   76 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLT-RRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISI   76 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCC-CcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEE
Confidence            4688999999999999999999888 9999999987542  233446789999999999 99999999999998877653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.10  E-value=4.5e-10  Score=86.40  Aligned_cols=76  Identities=32%  Similarity=0.509  Sum_probs=63.9

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |+..+.||+|+||.||++.+..+ ++.+|+|.+.............+.+|+.+|..+ +|+||+.+++.|...+.+|+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~l   77 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRAT-GKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCL   77 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCC-CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEE
Confidence            77889999999999999999988 999999999765432333445678999999999 99999999999988877654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0594|consensus

Probab=99.10  E-value=8.3e-11  Score=90.77  Aligned_cols=74  Identities=20%  Similarity=0.364  Sum_probs=65.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCC-ccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF-LTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~-iv~l~~~~~~~~  174 (178)
                      ...|+.++.||+|.||+||+|+.+.+ |..||+|.++...- .++......+|+.+++.| .|+| ||.|++++.+.+
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~-g~~VALKkirl~~~-~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRT-GKFVALKKIRLEFE-EEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecC-CCEEEEEEEecccc-ccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecc
Confidence            56688889999999999999999999 99999999986532 356677889999999999 9999 999999998876

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.10  E-value=2.6e-10  Score=89.39  Aligned_cols=72  Identities=50%  Similarity=0.852  Sum_probs=61.3

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~l   72 (323)
T cd05595           1 KLLGKGTFGKVILVREKAT-GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCF   72 (323)
T ss_pred             CeeeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEE
Confidence            4799999999999999988 999999999865433344556788999999999 99999999999998887774

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.10  E-value=2.3e-10  Score=92.46  Aligned_cols=82  Identities=22%  Similarity=0.291  Sum_probs=64.3

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ....++|.++++||+|+||.||+|.+...    .+..||+|.+....  .......+.+|+.+|..+..|||||+++++|
T Consensus        33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            34467799999999999999999987532    03469999986542  2334567999999999993399999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+||
T Consensus       111 ~~~~~~~l  118 (400)
T cd05105         111 TKSGPIYI  118 (400)
T ss_pred             ccCCceEE
Confidence            88877764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0197|consensus

Probab=99.10  E-value=5.7e-11  Score=95.72  Aligned_cols=77  Identities=26%  Similarity=0.409  Sum_probs=64.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..+.+.+++.||+|.||.||+|.+...  ..||+|.+....+    ....|.+|+.+|++| .|++||+||+++..++
T Consensus       202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~~--~~vavk~ik~~~m----~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~  274 (468)
T KOG0197|consen  202 EIPREELKLIRELGSGQFGEVWLGKWNGS--TKVAVKTIKEGSM----SPEAFLREAQIMKKL-RHEKLVKLYGVCTKQE  274 (468)
T ss_pred             eecHHHHHHHHHhcCCccceEEEEEEcCC--CcccceEEecccc----ChhHHHHHHHHHHhC-cccCeEEEEEEEecCC
Confidence            34445577789999999999999999843  5799999976432    345688999999999 9999999999999988


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       275 piyI  278 (468)
T KOG0197|consen  275 PIYI  278 (468)
T ss_pred             ceEE
Confidence            8875

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.09  E-value=5.9e-10  Score=86.72  Aligned_cols=76  Identities=21%  Similarity=0.327  Sum_probs=65.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||+|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .||||++++++|...+.+||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPS-GLIMARKLIHLEI--KPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCC-CeEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEE
Confidence            3699999999999999999999988 8899999886542  233456789999999999 99999999999998888774

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.09  E-value=3.5e-10  Score=88.93  Aligned_cols=72  Identities=53%  Similarity=0.870  Sum_probs=61.8

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l   72 (328)
T cd05593           1 KLLGKGTFGKVILVREKAS-GKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCF   72 (328)
T ss_pred             CeeeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEE
Confidence            4689999999999999988 999999999865433344566789999999999 99999999999998887774

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.09  E-value=4.7e-10  Score=87.91  Aligned_cols=78  Identities=73%  Similarity=1.192  Sum_probs=64.1

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++++.||+|+||.||+|....+ +..||+|++.+...........+..|+.++..+..|++|+.++++|...+.+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGT-DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   78 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence            589999999999999999999988 899999999865433344566788999999988334568889999988887774

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.09  E-value=3.7e-10  Score=88.76  Aligned_cols=73  Identities=45%  Similarity=0.866  Sum_probs=62.0

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..||+|++.+...........+..|+.++..+..||||+.++++|.+.+.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~l   73 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKT-RRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFF   73 (329)
T ss_pred             CeEeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEE
Confidence            4799999999999999988 999999999875443344556788999999888679999999999998888775

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.09  E-value=6.3e-10  Score=85.56  Aligned_cols=78  Identities=22%  Similarity=0.355  Sum_probs=65.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++.+.||.|+||.||++....+ +..||+|.+....  .......+.+|+.+++.+ .|+||+++++++...+.+
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~-~~~~~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   78 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLT-GQLVALKEIRLEH--EEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTL   78 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCC-CcEEEEEEEeccc--ccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeE
Confidence            357899999999999999999999888 8999999987542  222334578899999999 999999999999987776


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        79 ~l   80 (291)
T cd07844          79 TL   80 (291)
T ss_pred             EE
Confidence            64

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.09  E-value=6.1e-10  Score=85.74  Aligned_cols=77  Identities=31%  Similarity=0.506  Sum_probs=64.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|+..++||+|+||.||++.+..+ ++.+|+|.+.............+.+|+.++..+ +|+||+.+++.+.+.+.+||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~l   77 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRAT-GKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCL   77 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCC-CceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEE
Confidence            377889999999999999999999 999999998765432233345678999999999 99999999999988877764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.09  E-value=5.3e-10  Score=84.24  Aligned_cols=75  Identities=27%  Similarity=0.495  Sum_probs=63.1

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |++++.||+|+||.||++.+..+ +..+|+|++..... .........+|+.++..+ .|+||+++++++.....+|+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~-~~~~~~K~~~~~~~-~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKN-GQKVAVKIIDKSEI-EEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTT-TEEEEEEEEESTTH-HHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCC-CeEEEEEEeccccc-cccccchhhhhhhccccc-cccccccccccccccccccc
Confidence            78999999999999999999988 88999999987643 222233456699999999 99999999999998877663

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.08  E-value=5.4e-10  Score=87.53  Aligned_cols=78  Identities=72%  Similarity=1.192  Sum_probs=64.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|.+++.||+|+||.||++.+..+ +..+|+|++.+...........+..|..++..+..|++|+.++++|...+.+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGT-DELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF   78 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence            588999999999999999999988 899999999865433344456678888888877568999999999998887764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.08  E-value=3.1e-10  Score=90.60  Aligned_cols=72  Identities=18%  Similarity=0.175  Sum_probs=60.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      +|++++.||+|+||.||++.+..+ +..||+|.+..... .......+.+|+.++..+ .|+||+++++++...+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~   72 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRD-GKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPH   72 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCC-CCEEEEEecccccc-chHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCC
Confidence            478899999999999999999888 99999998864321 233456789999999999 9999999999988765

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.08  E-value=5e-10  Score=87.82  Aligned_cols=78  Identities=72%  Similarity=1.182  Sum_probs=64.3

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|+..+.||+|+||.||++.+..+ +..||+|++.+...........+..|+.++..+..|++|+.++++|...+.+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGT-DELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYF   78 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEE
Confidence            478899999999999999999988 999999999865433344556788899999888456788889999998887774

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.08  E-value=3.4e-10  Score=85.48  Aligned_cols=77  Identities=34%  Similarity=0.661  Sum_probs=66.2

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|++.+.||.|+||.||++.+..+ +..+|+|++.+.........+.+.+|+.++..+ +||||++++++|...+.+|+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   77 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDT-KKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYL   77 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccC-CcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEE
Confidence            489999999999999999999888 899999999865433334567899999999999 99999999999888777664

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.07  E-value=8.4e-10  Score=83.54  Aligned_cols=78  Identities=21%  Similarity=0.233  Sum_probs=66.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++....+ +..+|+|.+.............+.+|+.++..+ .|+||+.++++|...+.+|+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLD-GRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNI   79 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCC-CCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEE
Confidence            5799999999999999999999988 999999998754333344467899999999999 99999999999988776653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.07  E-value=5.6e-09  Score=84.09  Aligned_cols=74  Identities=22%  Similarity=0.276  Sum_probs=59.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeC--CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRG--SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+...+|++++.||.|+||.||+|....  . +..+|+|.+...        ....+|+.+|..+ .|+|||+++++|..
T Consensus        88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~-~~~v~vK~~~~~--------~~~~~E~~il~~l-~h~~iv~~~~~~~~  157 (392)
T PHA03207         88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQ-RKKVIVKAVTGG--------KTPGREIDILKTI-SHRAIINLIHAYRW  157 (392)
T ss_pred             hhccCceEEEEeecCCCCeEEEEEEEcCCcc-ceeEEEEecccc--------ccHHHHHHHHHhc-CCCCccceeeeEee
Confidence            3445679999999999999999997643  3 567899987543        2356899999999 99999999999988


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       158 ~~~~~l  163 (392)
T PHA03207        158 KSTVCM  163 (392)
T ss_pred             CCEEEE
Confidence            877664

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=3.9e-10  Score=87.96  Aligned_cols=70  Identities=39%  Similarity=0.677  Sum_probs=60.0

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ +||||++++++|...+.+||
T Consensus         1 lg~G~~g~Vy~~~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   70 (312)
T cd05585           1 IGKGSFGKVMQVRKRDT-QRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYL   70 (312)
T ss_pred             CCcCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEE
Confidence            79999999999999988 999999999765433344566788999999999 99999999999998887774

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.07  E-value=8.4e-10  Score=84.47  Aligned_cols=76  Identities=17%  Similarity=0.378  Sum_probs=64.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++++.||.|+||.||++.+..+ +..+|+|.+..... .......+.+|+.++..+ .||||+++++++...+.+|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   76 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKT-GQIVAMKKIRLESE-EEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYL   76 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCC-CcEEEEEEeccccc-cCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEE
Confidence            588999999999999999999888 99999999865432 233446788999999999 99999999999998877764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.07  E-value=6.9e-10  Score=88.15  Aligned_cols=74  Identities=22%  Similarity=0.236  Sum_probs=63.0

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|++.+.||+|+||.||++.+..+ +..+|+|.+..... .......+.+|+.++..+ .||||++++++|...
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   92 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVL-GINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQ   92 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCC-CceeEEEEeccccc-chhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccC
Confidence            457899999999999999999999988 99999999865422 334456788999999999 999999999988654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.06  E-value=5.1e-10  Score=85.16  Aligned_cols=78  Identities=15%  Similarity=0.227  Sum_probs=63.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...+|++.+.||+|+||.||++.+.   .. +..+|+|.++...  .......+.+|+.++..+ .||||+++++++...
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~-~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~   78 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKR-ELPVAIHTLRAGC--SDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRG   78 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCc-eeeEEEEecCCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecC
Confidence            4467999999999999999999875   33 5689999987542  233446789999999999 999999999999887


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        79 ~~~~l   83 (266)
T cd05064          79 NTMMI   83 (266)
T ss_pred             CCcEE
Confidence            76664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.06  E-value=8.4e-10  Score=86.60  Aligned_cols=71  Identities=24%  Similarity=0.378  Sum_probs=59.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +|++.++||+|+||.||++.+..+ +..||+|.+..... .......+.+|+.+++.+ .||||+++++++...
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~   71 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHT-GEKVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPP   71 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCC-CCEEEEEEechhhc-cchhHHHHHHHHHHHHhC-CCCCEeeecceEecc
Confidence            489999999999999999999988 99999999874321 223345788999999999 999999999887643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.05  E-value=3.5e-10  Score=85.78  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|.+.+.||.|+||.||++....+ +..+++|.+.............+.+|+.++..+ .|+||++++++|...+.+|
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~~~-~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~   78 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCLLD-GVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELN   78 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeecCC-CceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEE
Confidence            35789999999999999999999888 899999988754333344556889999999999 9999999999998877665


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        79 ~   79 (267)
T cd08229          79 I   79 (267)
T ss_pred             E
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.05  E-value=6.4e-10  Score=87.22  Aligned_cols=72  Identities=50%  Similarity=0.863  Sum_probs=61.2

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~l   72 (325)
T cd05594           1 KLLGKGTFGKVILVKEKAT-GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCF   72 (325)
T ss_pred             CeeeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEE
Confidence            4799999999999999988 999999999865433334456788999999999 99999999999998887774

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.05  E-value=3.2e-10  Score=90.80  Aligned_cols=80  Identities=25%  Similarity=0.304  Sum_probs=63.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ...++|++.++||+|+||.||+|...     .+ +..||+|++....  .....+.+.+|+.++..+..|||||+++++|
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~-~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDA-AMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCcc-ceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            34557999999999999999999742     34 5689999987542  2334567899999999986799999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+..||
T Consensus       109 ~~~~~~~l  116 (375)
T cd05104         109 TVGGPTLV  116 (375)
T ss_pred             ccCCccee
Confidence            88776553

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.05  E-value=1.2e-09  Score=84.02  Aligned_cols=77  Identities=23%  Similarity=0.327  Sum_probs=64.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..+|.+++.||+|+||.||+|....+ +..+|+|.+....  .......+.+|+.++..+ .|+||+++++++...+.+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~-~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~   79 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRIN-GQLVALKVISMKT--EEGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLT   79 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCC-CcEEEEEEecccC--cCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEE
Confidence            36799999999999999999999888 8999999986542  223334678999999999 9999999999998877766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        80 l   80 (291)
T cd07870          80 F   80 (291)
T ss_pred             E
Confidence            3

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.05  E-value=8.1e-10  Score=86.89  Aligned_cols=73  Identities=44%  Similarity=0.859  Sum_probs=61.0

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++.+..+ +..+|+|++.+...........+.+|+.++..+..||||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l   73 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKT-ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   73 (329)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEE
Confidence            4799999999999999988 999999999865433344556788899988877589999999999999888774

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.04  E-value=8.5e-10  Score=83.73  Aligned_cols=77  Identities=25%  Similarity=0.370  Sum_probs=65.3

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ...+|++.+.||+|+||.||++....+ +..+|+|++....   ......+.+|+.++..+ .||||+++++++...+.+
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~-~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~   81 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHT-GELAAVKIIKLEP---GDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKL   81 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCC-CeEEEEEEEecCc---cchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEE
Confidence            356799999999999999999999888 8999999987542   23345678999999999 999999999999888777


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        82 ~i   83 (267)
T cd06646          82 WI   83 (267)
T ss_pred             EE
Confidence            64

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.04  E-value=1.7e-09  Score=81.52  Aligned_cols=75  Identities=28%  Similarity=0.523  Sum_probs=64.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||.|+||.||++.+..+ +..+|+|.++...  .....+.+.+|+.+++.+ .|+||+++++.|.+.+.+|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~-~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNS-DQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCC-CceEEEEEEEcCc--chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEE
Confidence            588999999999999999999988 9999999986542  233456788999999999 99999999999999888774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.04  E-value=1.2e-09  Score=84.10  Aligned_cols=78  Identities=17%  Similarity=0.345  Sum_probs=66.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++.+.||+|.||.||++....+ +..+|+|.+..... .......+.+|+.+++.+ .|+||+++++++...+.+|
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   77 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVT-NETIALKKIRLEQE-DEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLY   77 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCC-CcEEEEEehhhccc-cccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEE
Confidence            36799999999999999999999888 99999998865432 233446788999999999 9999999999999887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        78 l   78 (294)
T PLN00009         78 L   78 (294)
T ss_pred             E
Confidence            4

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.04  E-value=4.1e-10  Score=86.42  Aligned_cols=78  Identities=21%  Similarity=0.282  Sum_probs=66.8

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..++|++++.||+|+||.||++....+ +..+|+|++....  .......+.+|+.++..+ .|+||+++++++...+.+
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   78 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHIPT-GTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNI   78 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEcCC-CcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEE
Confidence            456799999999999999999999988 8999999886542  234457889999999999 999999999999988777


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        79 ~l   80 (284)
T cd06620          79 CM   80 (284)
T ss_pred             EE
Confidence            64

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.03  E-value=1.3e-09  Score=83.35  Aligned_cols=75  Identities=23%  Similarity=0.413  Sum_probs=64.3

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||.|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .|+||++++++|...+.+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTT-GEIVALKEIHLDA--EEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCC-CeEEEEEEecccc--cccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEE
Confidence            489999999999999999999888 9999999987543  233345678999999999 99999999999998877664

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0192|consensus

Probab=99.03  E-value=3.4e-10  Score=90.05  Aligned_cols=75  Identities=23%  Similarity=0.370  Sum_probs=61.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCe-EEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV-YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~-~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+....+...+.||.|+||+||++.++..   . ||+|++......... .+.|.+|+.+|..+ +|||||.+++++...
T Consensus        37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~---~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l-~HpNIV~f~G~~~~~  111 (362)
T KOG0192|consen   37 EIDPDELPIEEVLGSGSFGTVYKGKWRGT---DVVAVKIISDPDFDDES-RKAFRREASLLSRL-RHPNIVQFYGACTSP  111 (362)
T ss_pred             ecChHHhhhhhhcccCCceeEEEEEeCCc---eeEEEEEecchhcChHH-HHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence            34445566677799999999999999844   5 999999865442223 77999999999999 999999999999877


Q ss_pred             C
Q psy1646         174 V  174 (178)
Q Consensus       174 ~  174 (178)
                      .
T Consensus       112 ~  112 (362)
T KOG0192|consen  112 P  112 (362)
T ss_pred             C
Confidence            5

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.03  E-value=7e-10  Score=84.93  Aligned_cols=76  Identities=21%  Similarity=0.366  Sum_probs=64.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||+|.||.||++.+..+ |..+|+|.+..... .......+.+|+.+++.+ +|+||+++++++.+.+.+|+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~-g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~l   76 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRET-HEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTL   76 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCC-CcEEEEEEeecccc-cccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEE
Confidence            488999999999999999999988 99999999875432 233445688899999999 99999999999988877664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG1187|consensus

Probab=99.03  E-value=6.9e-10  Score=88.45  Aligned_cols=71  Identities=25%  Similarity=0.291  Sum_probs=59.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|.....||+|+||.||+|... + +..||||.+.....  .. ...|.+|+.++..+ +|||+|+|+++|.+.+
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~-~~~vAVK~~~~~~~--~~-~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~  144 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVLS-D-GTVVAVKRLSSNSG--QG-EREFLNEVEILSRL-RHPNLVKLLGYCLEGG  144 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEEC-C-CCEEEEEEecCCCC--cc-hhHHHHHHHHHhcC-CCcCcccEEEEEecCC
Confidence            367888899999999999999987 3 57899997765421  11 45599999999999 8999999999999766

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.03  E-value=8.2e-10  Score=86.38  Aligned_cols=73  Identities=81%  Similarity=1.230  Sum_probs=61.2

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+..||||++++++|...+.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~l   73 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGT-DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFF   73 (318)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEE
Confidence            4799999999999999988 899999999865433344566788999999887579999999999998888774

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.03  E-value=1.3e-09  Score=84.63  Aligned_cols=78  Identities=28%  Similarity=0.594  Sum_probs=66.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++.+..+ +..|++|.+.............+.+|+.++..+ .||||+++++.+...+++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~-~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   78 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKET-RQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCM   78 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCC-CcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEE
Confidence            3689999999999999999999988 999999998765432334456788999999999 99999999999988887664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.02  E-value=2e-09  Score=82.29  Aligned_cols=76  Identities=17%  Similarity=0.308  Sum_probs=60.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHH-HHHhcCCCCccccceeEEeCCeEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI-LALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ++|++.+.||.|+||.||++.+..+ +..||+|.+.....  ......+..|+.+ ++.+ .||||+++++++...+.+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~-~~~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPT-GTIMAVKRIRATVN--SQEQKRLLMDLDISMRSV-DCPYTVTFYGALFREGDVW   76 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCC-CcEEEEEEEecCCC--cHHHHHHHHHHHHHHHHc-CCCCeeeeeEEEecCCcEE
Confidence            4799999999999999999999988 99999999876432  2233456777776 4455 9999999999998877766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        77 l   77 (283)
T cd06617          77 I   77 (283)
T ss_pred             E
Confidence            4

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=1.7e-09  Score=84.18  Aligned_cols=78  Identities=40%  Similarity=0.685  Sum_probs=66.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++....+ +..+|+|.+.............+..|++++..+ .|+||+++++.+.....+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   78 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGT-GKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCL   78 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCC-CcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEE
Confidence            4699999999999999999999988 899999999866443334566799999999999 99999999999988877664

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.02  E-value=5.1e-10  Score=88.07  Aligned_cols=76  Identities=29%  Similarity=0.347  Sum_probs=60.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +..++|++.++||+|+||.||+|.+.     .. +..||+|.+....  .......+.+|+.++..+..|||||+++++|
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~   80 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSS-CNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC   80 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCccc-chhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence            44568999999999999999999753     23 4679999987432  2334567899999999987799999999988


Q ss_pred             EeCC
Q psy1646         171 QTKV  174 (178)
Q Consensus       171 ~~~~  174 (178)
                      ...+
T Consensus        81 ~~~~   84 (338)
T cd05102          81 TKPN   84 (338)
T ss_pred             cCCC
Confidence            7643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.02  E-value=8.4e-10  Score=84.51  Aligned_cols=77  Identities=23%  Similarity=0.374  Sum_probs=64.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|++.+.||+|+||.||+|.+..+ +..+|+|.+..... .....+.+.+|+.++..+ .||||++++++|...+.+||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~-~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   77 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKET-GQIVAIKKFLESED-DKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYL   77 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCC-CCEEEEEeHhhccC-cchhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEE
Confidence            4689999999999999999999888 89999998865432 223456788999999999 99999999999988877664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.02  E-value=9.3e-10  Score=86.14  Aligned_cols=73  Identities=86%  Similarity=1.267  Sum_probs=60.8

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||+|.+..+ +..||+|++.+...........+..|..++..+..||||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~l   73 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGT-DEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFF   73 (321)
T ss_pred             CccccCCCeEEEEEEECCC-CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEE
Confidence            4699999999999999988 999999999865433344556788899998876589999999999998888775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0193|consensus

Probab=99.01  E-value=1.7e-09  Score=88.90  Aligned_cols=76  Identities=21%  Similarity=0.268  Sum_probs=64.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..+.+.++..||.|+||+||+|.+.++    ||||+++.... .....+.|.+|+.++++- +|-||+-+.++|..+
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd----VAVK~Lnv~~p-t~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWHGD----VAVKLLNVDDP-TPEQLQAFKNEVAVLKKT-RHENILLFMGACMNP  460 (678)
T ss_pred             cccCHHHhhccceeccccccceeecccccc----eEEEEEecCCC-CHHHHHHHHHHHHHHhhc-chhhheeeehhhcCC
Confidence            345567788899999999999999999866    99999987655 455788999999999999 999999999988765


Q ss_pred             Ce
Q psy1646         174 VK  175 (178)
Q Consensus       174 ~~  175 (178)
                      ..
T Consensus       461 ~~  462 (678)
T KOG0193|consen  461 PL  462 (678)
T ss_pred             ce
Confidence            54

>KOG0589|consensus

Probab=99.01  E-value=2e-10  Score=92.04  Aligned_cols=78  Identities=17%  Similarity=0.501  Sum_probs=68.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe-E
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK-C  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~-~  176 (178)
                      +++|++++++|+|+||.+++++++.. +..+++|.|+.... .........+|+.++.++ .|||||.+++.|...+. +
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~-~~~~vlK~I~l~~~-t~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l   79 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSD-DKLYVLKKINLEKL-TEPERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLL   79 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccC-CceEEEEEEecccc-CchhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceE
Confidence            57899999999999999999999988 89999999987765 445556889999999999 99999999999998776 5


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        80 ~I   81 (426)
T KOG0589|consen   80 CI   81 (426)
T ss_pred             EE
Confidence            54

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.01  E-value=1.1e-09  Score=83.77  Aligned_cols=76  Identities=24%  Similarity=0.381  Sum_probs=63.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|+.++.||.|+||.||++.+..+ +..+|+|.+..... .......+.+|+.++..+ +||||+++++++...+.+|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~   76 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYL   76 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCC-CCEEEEEEcccccc-ccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEE
Confidence            488999999999999999999888 99999998875432 233445788999999999 99999999999988776653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.01  E-value=6.2e-10  Score=85.39  Aligned_cols=76  Identities=20%  Similarity=0.377  Sum_probs=65.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .|+||++++++|...+.+|+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   76 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPT-GVTMAMKEIRLEL--DESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYM   76 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCC-CcEEEEEEeeccc--CHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEE
Confidence            4689999999999999999999888 9999999886531  233456789999999999 99999999999988887764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.00  E-value=1.2e-09  Score=85.38  Aligned_cols=73  Identities=66%  Similarity=1.040  Sum_probs=58.9

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..||+|++.............+..|..++..+..||||+++++++...+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~l   73 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGT-NEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFF   73 (316)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEE
Confidence            4799999999999999988 999999999865432334455667788777765489999999999998887764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.00  E-value=8.4e-10  Score=88.39  Aligned_cols=81  Identities=28%  Similarity=0.357  Sum_probs=64.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ...++|+++++||+|+||.||++.+...    .+..||+|.+....  .......+.+|+.++..+..|+|||+++++|.
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            4456799999999999999999986543    03479999997542  23345678999999998867999999999998


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus       113 ~~~~~~l  119 (374)
T cd05106         113 HGGPVLV  119 (374)
T ss_pred             CCCCeEE
Confidence            8777664

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.00  E-value=2.3e-09  Score=81.96  Aligned_cols=77  Identities=26%  Similarity=0.392  Sum_probs=64.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||+|+||.||++....+ +..+|+|.+..... .....+.+.+|+.++..+ .|+||++++++|.....+|+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~   77 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRET-GQIVAIKKFVESED-DPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHL   77 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCC-CcEEEEEEEeeccc-CccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEE
Confidence            4699999999999999999999888 89999998865432 223345678999999999 99999999999998877664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.00  E-value=1.1e-09  Score=85.74  Aligned_cols=73  Identities=71%  Similarity=1.072  Sum_probs=60.9

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..||+|++.+...........+..|+.++..+..||||++++++|...+.+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~i   73 (320)
T cd05590           1 RVLGKGSFGKVMLARLKES-GRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFF   73 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCC-CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEE
Confidence            4799999999999999988 999999999865433344566788899988876579999999999998888774

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.00  E-value=8.5e-10  Score=86.54  Aligned_cols=73  Identities=19%  Similarity=0.301  Sum_probs=61.3

Q ss_pred             EEeeeccC--CCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         103 FIKVLGKG--SFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       103 ~~~~lG~G--~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++++||+|  +|++||++..+.+ +..||+|.++.... .......+.+|+.+++.+ +||||++++++|...+.+|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPT-GEYVTVRRINLEAC-TNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeeccc-CcEEEEEEechhhc-cHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEE
Confidence            56789999  7889999999999 99999999976532 234456778899999999 99999999999998887764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0696|consensus

Probab=99.00  E-value=1.6e-10  Score=91.59  Aligned_cols=85  Identities=65%  Similarity=1.090  Sum_probs=75.7

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+...+|.++.+||+|+||+|.++..+++ .+.||||++++.........+--+.|-.+|...-.-|++++|+.+|++
T Consensus       343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgt-dELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT  421 (683)
T KOG0696|consen  343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGT-DELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT  421 (683)
T ss_pred             ccceeecccceEEEeccCccceeeeecccCc-chhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh
Confidence            4478889999999999999999999999999 999999999988777777777788888888877577899999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+++|+
T Consensus       422 mDRLyF  427 (683)
T KOG0696|consen  422 MDRLYF  427 (683)
T ss_pred             hhheee
Confidence            999885

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.00  E-value=6.8e-10  Score=89.77  Aligned_cols=81  Identities=23%  Similarity=0.329  Sum_probs=64.2

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-CCCccccc
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-HPFLTALH  167 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-hp~iv~l~  167 (178)
                      ..+..++|.+.+.||+|+||.||+|.+..     . +..||+|++....  .......+.+|+.+|..+ . |||||+++
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~-~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l-~~H~niv~~~  107 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQS-TMKVAVKMLKSTA--RSSEKQALMSELKIMSHL-GPHLNIVNLL  107 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCC-ceEEEEEecCCCC--ChhHHHHHHHHHHHHHhc-CCCCCeEEEE
Confidence            44556778999999999999999998642     3 4689999997542  223345789999999999 6 99999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      ++|...+.+||
T Consensus       108 ~~~~~~~~~~i  118 (401)
T cd05107         108 GACTKGGPIYI  118 (401)
T ss_pred             EEEccCCCcEE
Confidence            99988776653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0201|consensus

Probab=99.00  E-value=3.2e-10  Score=89.90  Aligned_cols=76  Identities=21%  Similarity=0.377  Sum_probs=66.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|..+++||+|+||.||+|.+..+ ++.||+|+|+...  .......+.+|+.+|.++ .++||.++|+.|.....+|+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t-~k~vAiKii~Le~--~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwi   88 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKT-KKVVAIKIIDLEE--AEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWI   88 (467)
T ss_pred             cccccchhccccccceeeeeeeccc-cceEEEEEechhh--cchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHH
Confidence            4577789999999999999999999 9999999998764  355678899999999999 99999999999988777653

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.00  E-value=1.6e-09  Score=84.60  Aligned_cols=75  Identities=25%  Similarity=0.315  Sum_probs=60.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +...+|++.+.||+|+||.||+|.+..+ +.    .||+|.+....  .......+.+|+.++..+ .||||+++++++.
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~   79 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICL   79 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecC-CCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEc
Confidence            4567899999999999999999987655 54    38999886432  234456789999999999 9999999999887


Q ss_pred             eCC
Q psy1646         172 TKV  174 (178)
Q Consensus       172 ~~~  174 (178)
                      ...
T Consensus        80 ~~~   82 (316)
T cd05108          80 TST   82 (316)
T ss_pred             CCC
Confidence            654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.99  E-value=2.5e-09  Score=80.46  Aligned_cols=76  Identities=26%  Similarity=0.475  Sum_probs=65.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|.+.+.||+|+||.||++....+ +..+++|.+..... .......+.+|+.+++.+ .||||+++++++...+.+|+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   76 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKAD-KRVYAMKQIDLSKM-NRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNI   76 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCC-CcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEE
Confidence            588999999999999999999988 99999999875533 344567899999999999 99999999999988777664

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.99  E-value=2.2e-09  Score=80.84  Aligned_cols=76  Identities=21%  Similarity=0.417  Sum_probs=64.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||+|+||.||++....+ ++.+|+|.+..... .......+.+|+.+++.+ +|+||+++++++...+++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   76 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKED-GKQYVIKEINISKM-SPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYI   76 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCC-CCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEE
Confidence            488999999999999999999888 99999999875432 233456789999999999 99999999999988877764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0607|consensus

Probab=98.99  E-value=1.6e-10  Score=88.81  Aligned_cols=76  Identities=17%  Similarity=0.317  Sum_probs=68.1

Q ss_pred             CCeEE-EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          99 EDFHF-IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~-~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +-|++ .+.||+|+|+.|--|....+ +..||||+|.+.   ....+.++.+|++++.++..|+||+.|+++|+++.++|
T Consensus        77 d~YkLt~e~LGeGAyasVqtcv~i~t-~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FY  152 (463)
T KOG0607|consen   77 DMYKLTSELLGEGAYASVQTCVSIQT-GKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFY  152 (463)
T ss_pred             HHHHhHHHHhcCccceeeeeeeeecc-chhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEE
Confidence            34666 57999999999999999999 999999999876   45677899999999999989999999999999999998


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       153 L  153 (463)
T KOG0607|consen  153 L  153 (463)
T ss_pred             E
Confidence            6

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.99  E-value=1.8e-09  Score=83.85  Aligned_cols=78  Identities=23%  Similarity=0.377  Sum_probs=65.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|...+.||+|+||.||++....+ +..||+|.+.............+.+|+.++..+ +||||++++++|...+..||
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~-~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRT-NEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCC-CcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEE
Confidence            5589999999999999999999888 899999998654322334456789999999999 99999999999998777664

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.99  E-value=1.2e-09  Score=83.82  Aligned_cols=70  Identities=37%  Similarity=0.576  Sum_probs=58.9

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||+|+||.||++.+..+ +..+|+|.+.+...........+..|+.++..+ +|+||+.++++|...+.+||
T Consensus         1 lg~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~l   70 (280)
T cd05608           1 LGKGGFGEVSACQMRAT-GKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCL   70 (280)
T ss_pred             CCCCCceeEEEEEEccC-CcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEE
Confidence            79999999999999988 999999999765432333446778999999999 99999999999988877764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=3.7e-09  Score=79.80  Aligned_cols=75  Identities=28%  Similarity=0.491  Sum_probs=65.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++....+ +..+++|++....   ......+.+|+.++..+ +||||+++++++...+.+||
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIAT-GELVAIKVIKLEP---GDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCC-CCEEEEEEEEcCc---hhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEE
Confidence            5799999999999999999999888 8899999987552   23567899999999999 99999999999988887764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.99  E-value=3e-09  Score=80.14  Aligned_cols=76  Identities=25%  Similarity=0.384  Sum_probs=65.1

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|+.+++||.|+||.||.+....+ +..+++|.+..... .......+.+|+.+++.+ +|+||++++++|...+.+|+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~   76 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTED-DSLVVWKEVNLTRL-SEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLI   76 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCC-CcEEEEEEEeeccc-chhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEE
Confidence            589999999999999999999888 99999999876543 344456789999999999 99999999999998777653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.99  E-value=2e-09  Score=85.31  Aligned_cols=74  Identities=20%  Similarity=0.266  Sum_probs=62.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|++++.||+|+||.||++.+..+ +..+|+|.+..... .......+.+|+.+++.+ .||||++++++|...
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   88 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQ   88 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCC-CceEEEEEeCCccc-ChHHHHHHHHHHHHHHHh-CCCchhceeeeeecc
Confidence            467899999999999999999999888 89999999875422 334456788999999999 999999999988654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.98  E-value=1.5e-09  Score=83.23  Aligned_cols=70  Identities=30%  Similarity=0.538  Sum_probs=58.0

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||+|+||.||++....+ +..+|+|.+....+........+..|++++..+ .||||++++++|.....+||
T Consensus         1 lg~G~~g~Vy~~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~l   70 (277)
T cd05607           1 LGKGGFGEVCAVQVKNT-GKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCL   70 (277)
T ss_pred             CCCCCceEEEEEEEccC-CcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEE
Confidence            79999999999999988 999999999765432233344567899999999 99999999999988877764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.98  E-value=2.2e-09  Score=82.24  Aligned_cols=77  Identities=21%  Similarity=0.440  Sum_probs=65.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||+|+||.||++.+..+ +..||+|.++.... .......+.+|+.+++.+ .|+||++++++|...+.+||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~-~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i   77 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKAT-GEIVAIKKFKESED-DEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYL   77 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCC-CcEEEEehhhhhcc-cccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEE
Confidence            3699999999999999999999988 89999999875432 334457889999999999 99999999999998777664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.98  E-value=3.2e-09  Score=82.17  Aligned_cols=75  Identities=13%  Similarity=0.202  Sum_probs=64.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .+|.+++.||.|+||.||++....+ +..||+|.+....   ......+.+|+.+++.+ .|+||++++++|...+.+|+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   93 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIAT-GQEVAIKQMNLQQ---QPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV   93 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCC-CCEEEEEEEecCc---cchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEE
Confidence            6799999999999999999999888 8999999987542   33446788999999999 99999999999988877664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.98  E-value=1.9e-09  Score=84.73  Aligned_cols=73  Identities=42%  Similarity=0.821  Sum_probs=61.8

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++....+ +..+|+|++.+...........+.+|+.++..+..|+||+.++++|...+.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~l   73 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKN-DQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFL   73 (327)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEE
Confidence            4799999999999999988 999999999865443344566788999999888679999999999998888774

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0658|consensus

Probab=98.98  E-value=1.5e-09  Score=84.39  Aligned_cols=65  Identities=28%  Similarity=0.456  Sum_probs=54.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .|.-.+++|.|+||.||+|....+ ++.+|||.+-...       +--.+|..+|+.+ +|||||+|..+|...
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~-~~~vAIKKv~~d~-------r~knrEl~im~~l-~HpNIV~L~~~f~~~   89 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRET-EEEVAIKKVLQDK-------RYKNRELQIMRKL-DHPNIVRLLYFFSSS   89 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCC-CceeEEEEecCCC-------CcCcHHHHHHHhc-CCcCeeeEEEEEEec
Confidence            478899999999999999999998 9999999764331       1235899999999 999999999988753

>KOG0579|consensus

Probab=98.98  E-value=1.5e-11  Score=101.71  Aligned_cols=75  Identities=28%  Similarity=0.459  Sum_probs=66.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|+++..||.|+||+||++..+.+ +...|.|+|...   ....++.++-||+||..| +||+||+|++.|..++.+||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket-~~lAAaKvIetk---seEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKET-KLLAAAKVIETK---SEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccc-hhhhhhhhhccc---chhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEE
Confidence            5699999999999999999999988 888889998754   456678899999999999 99999999999998888875

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.98  E-value=3.3e-09  Score=81.13  Aligned_cols=76  Identities=20%  Similarity=0.364  Sum_probs=65.2

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||.|+||.||++.+..+ +..+++|++..... .......+.+|+.++..+ .|+||+++++++...+.+|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~   76 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRET-GETVALKKVALRRL-EGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVL   76 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCC-CceEEEEEEEcccc-cchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEE
Confidence            489999999999999999999888 99999999876532 234456789999999999 99999999999988777664

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.97  E-value=1.7e-09  Score=82.90  Aligned_cols=79  Identities=20%  Similarity=0.294  Sum_probs=63.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEe----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKR----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +.+++|++.+.||+|+||.||+|...    .. +..+++|.+....  .......+.+|+.+++.+ .||||+++++++.
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~   77 (283)
T cd05090           2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDH-AQLVAIKTLKDIN--NPQQWGEFQQEASLMAEL-HHPNIVCLLGVVT   77 (283)
T ss_pred             CChhhceeeeeccccCCcceEEEEEecCCCCC-cceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEe
Confidence            35678999999999999999999864    23 5689999886432  233446788999999999 9999999999988


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus        78 ~~~~~~l   84 (283)
T cd05090          78 QEQPVCM   84 (283)
T ss_pred             cCCceEE
Confidence            8776653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.97  E-value=3.6e-09  Score=82.19  Aligned_cols=75  Identities=24%  Similarity=0.364  Sum_probs=62.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...++|++.+.||+|+||.||++.+..+ +..||+|.+..... .......+.+|+.++..+ .|+||+++++++...
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   78 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTS-GEIVALKKVRMDNE-RDGIPISSLREITLLLNL-RHPNIVELKEVVVGK   78 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCC-CcEEEEEEEEeccC-CCCCcchhhHHHHHHHhC-CCCCCcceEEEEecC
Confidence            4567899999999999999999999988 99999999875432 222334567899999999 999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.97  E-value=1.8e-09  Score=84.43  Aligned_cols=71  Identities=48%  Similarity=0.681  Sum_probs=58.1

Q ss_pred             eeeccCCCeeEEEEEEe---CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++...   .+ +..+|+|++.+... .......+.+|+.++..+ .||||++++++|...+.+||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l   75 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDA-GQLYAMKVLKKATL-KVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYL   75 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCC-CCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEE
Confidence            57999999999998763   45 78999999986532 223345678899999999 99999999999998888774

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.97  E-value=1.7e-09  Score=84.67  Aligned_cols=72  Identities=49%  Similarity=0.798  Sum_probs=57.5

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHH-HHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR-ILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..+|+|++.+...........+..|+. ++..+ .||||++++++|.+.+.+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~l   73 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSD-GSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYF   73 (321)
T ss_pred             CeeeeCCCEEEEEEEECCC-CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEE
Confidence            4799999999999999988 9999999997654323334455667765 56777 99999999999998887764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.97  E-value=3.3e-09  Score=82.33  Aligned_cols=77  Identities=21%  Similarity=0.338  Sum_probs=63.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeC--CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC--Ce
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRG--SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK--VK  175 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~--~~  175 (178)
                      .|.+.+.||+|+||.||+|....  . +..+|+|.+.............+.+|+.++..+ .||||++++++|...  +.
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~-~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKD-GKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKS   78 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCC-CCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCce
Confidence            48899999999999999999987  7 899999998764322234456788999999999 999999999999887  55


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        79 ~~l   81 (316)
T cd07842          79 VYL   81 (316)
T ss_pred             EEE
Confidence            553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.96  E-value=2.9e-09  Score=80.15  Aligned_cols=76  Identities=26%  Similarity=0.458  Sum_probs=64.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|.+.+.||.|+||.||++....+ +..+|+|.+..... .......+.+|+.+++.+ .|+||+++++.+...+.+|+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~l   76 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSD-SEHCVIKEIDLTKM-PVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFI   76 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCC-CceEEEEEeeHhhc-cchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEE
Confidence            488999999999999999999988 89999999876533 233456788999999999 99999999999988777664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.96  E-value=3.2e-09  Score=81.71  Aligned_cols=75  Identities=16%  Similarity=0.342  Sum_probs=61.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ++|++.+.||.|+||.||++.+..+ +..||+|.+..... .......+.+|+.++..+..|+||+++++++...+.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~-~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~   75 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNT-GKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK   75 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCC-CcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence            3689999999999999999999988 99999998865422 233446788999999999556999999998877554

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.96  E-value=2.3e-09  Score=83.86  Aligned_cols=73  Identities=62%  Similarity=0.986  Sum_probs=59.0

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||+|.+..+ +..||+|++................|..++..+..||||++++++|.+.+.+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~l   73 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGT-NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFF   73 (316)
T ss_pred             CeeeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEE
Confidence            4799999999999999988 999999999865332233455677888888764499999999999998888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.96  E-value=2.3e-09  Score=83.82  Aligned_cols=73  Identities=66%  Similarity=0.967  Sum_probs=59.7

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..||+|++.+...........+..|..++..+.+||||++++++|...+.+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   73 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGK-GEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFF   73 (316)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEE
Confidence            4799999999999999988 999999999865332234455678888888765489999999999999888775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.96  E-value=2.2e-09  Score=81.59  Aligned_cols=77  Identities=21%  Similarity=0.269  Sum_probs=62.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCC---CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSD---EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..+|++.+.||+|+||.||+|.+..+ +   ..+|+|.+....  .......+.+|+.++..+ .||||+++++++...+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   78 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLP-GKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSK   78 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecC-CCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence            46799999999999999999988644 3   368999886542  233456789999999999 9999999999998777


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        79 ~~~l   82 (267)
T cd05066          79 PVMI   82 (267)
T ss_pred             ccEE
Confidence            6653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.96  E-value=4e-09  Score=87.63  Aligned_cols=82  Identities=21%  Similarity=0.245  Sum_probs=57.8

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeee--------------cccccccchhhhHHHHHHHHHHhcCCC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLK--------------KDVIIQDDDVDCTMTEKRILALAAKHP  161 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~--------------~~~~~~~~~~~~~~~Ei~il~~l~~hp  161 (178)
                      ...++|++++.||+|+||.||+|..+...+...++|.+.              +...........+.+|+.+|..+ .|+
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~Hp  223 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHE  223 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCC
Confidence            346789999999999999999998764312222322111              10000122345688999999999 999


Q ss_pred             CccccceeEEeCCeEeC
Q psy1646         162 FLTALHSCFQTKVKCSF  178 (178)
Q Consensus       162 ~iv~l~~~~~~~~~~yl  178 (178)
                      |||++++++...+..|+
T Consensus       224 nIv~l~~~~~~~~~~~l  240 (501)
T PHA03210        224 NILKIEEILRSEANTYM  240 (501)
T ss_pred             CcCcEeEEEEECCeeEE
Confidence            99999999998887664

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.96  E-value=1.9e-09  Score=83.00  Aligned_cols=75  Identities=31%  Similarity=0.496  Sum_probs=65.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|++++.||.|+||.||++.+..+ +..+++|.+...   .......+.+|+.++..+ .|+||++++++|...+.+|+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKET-GALAAAKVIETK---SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCC-CceEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEE
Confidence            5699999999999999999999988 899999998754   344567788999999999 99999999999988877664

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.96  E-value=2.6e-09  Score=81.65  Aligned_cols=76  Identities=24%  Similarity=0.438  Sum_probs=63.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|++++.||.|+||.||++....+ +..+|+|.+....  .......+.+|+.++..+ .|+||++++++|...+.+|+
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~-~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRT-QKVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCC-CcEEEEEEecccc--chHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEE
Confidence            3578889999999999999998878 8999999886542  223456788999999999 99999999999998877664

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.96  E-value=1e-09  Score=86.58  Aligned_cols=72  Identities=25%  Similarity=0.281  Sum_probs=60.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++|.+++.||.|+||.||++.+..+ +..||+|.+..... .......+.+|+.+++.+ .|+||++++++|..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   85 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRL-RQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHM-KHENVIGLLDVFTP   85 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCC-CCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcc
Confidence            46799999999999999999999888 89999999875422 223345678999999999 99999999988754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.95  E-value=2.6e-09  Score=81.21  Aligned_cols=77  Identities=19%  Similarity=0.295  Sum_probs=63.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCC---eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..+|++.+.||+|+||.||+|....+ +.   .||+|.+....  .......+..|+.+++.+ .||||+++++++...+
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~   78 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLP-GKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSR   78 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecC-CCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCC
Confidence            46799999999999999999998766 54   69999886542  344567899999999999 9999999999988777


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+|+
T Consensus        79 ~~~l   82 (269)
T cd05065          79 PVMI   82 (269)
T ss_pred             ceEE
Confidence            6553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.95  E-value=3.2e-09  Score=82.42  Aligned_cols=81  Identities=23%  Similarity=0.323  Sum_probs=63.6

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCe--EEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV--YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~--~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+..++|++.+.||+|+||.||+|.+..+ +..  +++|.+...  ........+.+|+.++..+..|+||+++++++..
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~-~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~   79 (303)
T cd05088           3 VLEWNDIKFQDVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH   79 (303)
T ss_pred             ccchhhceeeeeecCCCCceEEEEEEccC-CceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC
Confidence            45678899999999999999999998766 654  466665432  1234456788999999998679999999999988


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+|+
T Consensus        80 ~~~~~l   85 (303)
T cd05088          80 RGYLYL   85 (303)
T ss_pred             CCCceE
Confidence            776653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.95  E-value=2.4e-09  Score=80.78  Aligned_cols=74  Identities=23%  Similarity=0.349  Sum_probs=61.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++.+.||+|+||.||++... . +..+|+|.+....    .....+.+|+.+++.+ .||||+++++++...+.+|
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~-~-~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   75 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWR-A-QIKVAIKAINEGA----MSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLY   75 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEec-c-CceEEEEecccCC----ccHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEE
Confidence            467999999999999999999876 3 4679999886442    2345788999999999 9999999999998877665


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        76 i   76 (256)
T cd05114          76 I   76 (256)
T ss_pred             E
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.95  E-value=1.9e-09  Score=82.08  Aligned_cols=78  Identities=35%  Similarity=0.614  Sum_probs=65.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-CCCccccceeEEeCCeEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-HPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-hp~iv~l~~~~~~~~~~y  177 (178)
                      ++|.+.+.||.|+||.||++....+ +..+|+|++.+...........+.+|+.++..+ . |+||++++++|...+.+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~~i~~~~~~~~~~~~~~   78 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKET-NKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRL-NGHPGIIKLYYTFQDEENLY   78 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCC-CCEEEEEEechHhccchHHHHHHHHHHHHHHhc-ccCCCchhHHHHhcCCceEE
Confidence            4699999999999999999999888 999999998765433334456788999999999 7 999999999988777665


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        79 l   79 (280)
T cd05581          79 F   79 (280)
T ss_pred             E
Confidence            4

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.95  E-value=5.1e-09  Score=78.77  Aligned_cols=76  Identities=21%  Similarity=0.407  Sum_probs=65.0

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||+|+||.||++....+ +..+|+|.+..... .......+.+|+.+++.+ +|+||+.+++.+...+.+|+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   76 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKAD-QKLVIIKQIPVEQM-TKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMI   76 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCC-CcEEEEEEEecccc-ccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEE
Confidence            488999999999999999999888 99999999976543 334467889999999999 99999999999887776653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG4250|consensus

Probab=98.95  E-value=3.2e-10  Score=94.39  Aligned_cols=70  Identities=27%  Similarity=0.348  Sum_probs=60.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .|...+.||+|+||.||+++++.+ |..+|||.++...  .....+.+.+|+++|++| .|+|||++.+.-++.
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnket-G~~vAvK~~~~~~--~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~   83 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKET-GRLVAVKTFNKES--SLRPRERWCREIEILKKL-NHPNIVKLFDIEETK   83 (732)
T ss_pred             ceeehhhhcCCccceeeeeccccc-ccchhHHhhhhhc--ccchHHHHHHHHHHHHHc-CchhhhhhcccCCcc
Confidence            477789999999999999999999 9999999998653  345567899999999999 899999998875543

>KOG0033|consensus

Probab=98.95  E-value=7.1e-12  Score=93.01  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=68.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|++-++||+|.|+.||+|.+..+ |+.+|+|+|+...+ .....+.+.+|+.|.+.| +|||||+|.+.+......|
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~t-g~~fa~kiin~~k~-~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~y   86 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTT-GLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHY   86 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccc-hHHHHHHHhhhhhh-ccccHHHHHHHHHHHHhc-CCCcEeehhhhhcccceeE
Confidence            45689999999999999999999999 99999999997776 344678899999999999 9999999999888877766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        87 l   87 (355)
T KOG0033|consen   87 L   87 (355)
T ss_pred             E
Confidence            4

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.95  E-value=5.6e-09  Score=78.94  Aligned_cols=76  Identities=21%  Similarity=0.279  Sum_probs=65.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++....+ +..+++|++.....  ......+.+|+.+++.+ .|+||+.+++.+...+.+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~i   76 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPN-NEKVAIKRIDLEKC--QTSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWL   76 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCC-CcEEEEEEeccCCc--chHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEE
Confidence            4799999999999999999998877 88999999875432  22567899999999999 99999999999988877664

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.94  E-value=4.1e-09  Score=81.29  Aligned_cols=77  Identities=23%  Similarity=0.315  Sum_probs=63.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +|++.+.||.|+||.||+|....+ +..||+|.+......  .......+..|+.++..+ .|+||+++++++.+.+.+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~-~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~   78 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKET-GRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNIN   78 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCC-CcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEE
Confidence            488899999999999999999888 899999999765432  122345677899999999 9999999999999877776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        79 l   79 (298)
T cd07841          79 L   79 (298)
T ss_pred             E
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.94  E-value=2.6e-09  Score=82.52  Aligned_cols=76  Identities=22%  Similarity=0.352  Sum_probs=62.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...++|++.+.||+|+||.||+|.+..+ +..+|+|.++.... .......+.+|+.+++.+ .||||+++++++.+..
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~   79 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDT-GELVALKKVRLDNE-KEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQ   79 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCC-CcEEEEEEEeeccc-ccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcc
Confidence            4467899999999999999999999988 89999999875422 223345678899999999 9999999999887644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=1.3e-09  Score=83.31  Aligned_cols=75  Identities=27%  Similarity=0.431  Sum_probs=65.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||.|+||.||++....+ +..+|+|.+...   .......+.+|+.++..+ .|+||+++++.+.....+|+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~-~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKET-GLFAAAKIIQIE---SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCC-CcEEEEEEEeeC---CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Confidence            5699999999999999999999888 899999998754   344556789999999999 99999999999998877664

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.94  E-value=7.2e-09  Score=80.20  Aligned_cols=75  Identities=12%  Similarity=0.205  Sum_probs=64.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .+|.+.+.||.|+||.||++....+ +..+++|.+....   ......+.+|+.++..+ .|+||+++++.|....++|+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~-~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~l   94 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQMNLQQ---QPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV   94 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCC-CcEEEEEEEecCC---cchHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEE
Confidence            5799999999999999999999888 8999999987653   23346788999999999 99999999999988877764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.94  E-value=4.3e-09  Score=82.66  Aligned_cols=78  Identities=40%  Similarity=0.725  Sum_probs=62.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +|++++.||+|+||.||++...   .+ +..+|+|++.+.... .......+..|+.++..+..|+||+.++++|...+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDT-GKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK   79 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCC-CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE
Confidence            4899999999999999998864   35 789999999754321 223455788999999999569999999999988887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        80 ~~l   82 (332)
T cd05614          80 LHL   82 (332)
T ss_pred             EEE
Confidence            764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.94  E-value=4e-09  Score=83.97  Aligned_cols=74  Identities=19%  Similarity=0.249  Sum_probs=62.3

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|.+++.||+|+||.||++.+..+ +..+|||.+..... .......+.+|+.+++.+ .||||+.++++|...
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~   95 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQ   95 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCC-CcEEEEEEeCcccc-CchhHHHHHHHHHHHHhc-CCCCccccceeeccc
Confidence            467899999999999999999999888 99999999875422 234456788999999999 999999999887643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.93  E-value=1.5e-09  Score=85.78  Aligned_cols=75  Identities=25%  Similarity=0.333  Sum_probs=59.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..++|+++++||+|+||.||+|.+.     .+ +..||||.++...  .......+.+|+.++..+.+|+||+++++++.
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTAT-CRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCcccc-ceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            3568999999999999999999853     34 6789999987542  22335678899999999966899999999876


Q ss_pred             eCC
Q psy1646         172 TKV  174 (178)
Q Consensus       172 ~~~  174 (178)
                      ..+
T Consensus        82 ~~~   84 (343)
T cd05103          82 KPG   84 (343)
T ss_pred             cCC
Confidence            543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.93  E-value=3.4e-09  Score=83.14  Aligned_cols=72  Identities=47%  Similarity=0.785  Sum_probs=57.5

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHH-HHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI-LALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..+|+|++.+...........+..|..+ +..+ .||||++++++|...+.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~l   73 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLD-GKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYF   73 (325)
T ss_pred             CceeeCCCeEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEE
Confidence            4699999999999999988 99999999976533233344566777764 5667 99999999999998887774

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.93  E-value=4.5e-09  Score=81.21  Aligned_cols=76  Identities=16%  Similarity=0.232  Sum_probs=64.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ...|.+.+.||.|+||.||++....+ +..+++|.+...   .......+.+|+.+++.+ .||||+.+++.|...+.+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVAT-GQEVAIKQMNLQ---QQPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCC-CCEEEEEEeccc---cchHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEE
Confidence            36799999999999999999998878 889999998644   233456789999999999 9999999999998877666


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        93 l   93 (293)
T cd06647          93 V   93 (293)
T ss_pred             E
Confidence            3

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.93  E-value=6.4e-09  Score=80.51  Aligned_cols=75  Identities=15%  Similarity=0.234  Sum_probs=64.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|.+.+.||.|.||.||++.+..+ +..+++|.+...   .......+.+|+.++..+ .|+||+.++++|...+.+|+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~-~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVAT-GQEVAIKQINLQ---KQPKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCC-CcEEEEEEEecc---cCchHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEE
Confidence            5699999999999999999999888 999999998754   233456789999999999 99999999999988777664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=4.4e-09  Score=79.50  Aligned_cols=78  Identities=23%  Similarity=0.331  Sum_probs=64.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc--cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ--DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      +.|++.+.||.|+||.||++....+ +..+|+|.+.......  ......+.+|+.++..+ .||||+++++++...+.+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~-~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   79 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDT-GRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETL   79 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCC-CcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeE
Confidence            4689999999999999999999888 8999999987543211  12345788999999999 999999999999988776


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        80 ~~   81 (263)
T cd06625          80 SI   81 (263)
T ss_pred             EE
Confidence            64

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0574|consensus

Probab=98.93  E-value=7.5e-11  Score=90.03  Aligned_cols=74  Identities=26%  Similarity=0.361  Sum_probs=65.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+-|.++.+||+|+||.||++.++.+ |..+|||.+...     ..+..+..||.||.++ ..+++|++|+.|.....+|
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~Es-G~v~AIK~VPV~-----sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLW  104 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRES-GHVLAIKKVPVD-----TDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLW  104 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhcc-CcEEEEEecCcc-----chHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceE
Confidence            35588999999999999999999999 999999988743     4678899999999999 9999999999988776666


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       105 I  105 (502)
T KOG0574|consen  105 I  105 (502)
T ss_pred             e
Confidence            4

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.93  E-value=4e-09  Score=80.07  Aligned_cols=78  Identities=23%  Similarity=0.256  Sum_probs=62.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCC--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGS--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .++|++.+.||+|+||.||+|.....  ....+|+|.+....  .......+.+|+.++..+ +|+||+++++.+...+.
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   79 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRP   79 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCc
Confidence            46799999999999999999987633  03579999886542  234456789999999999 99999999999887766


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +|+
T Consensus        80 ~~i   82 (266)
T cd05033          80 VMI   82 (266)
T ss_pred             eEE
Confidence            553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.93  E-value=8.4e-09  Score=82.05  Aligned_cols=71  Identities=24%  Similarity=0.355  Sum_probs=60.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ....|++++.||+|+||.||+|.+..+ +..||+|+....         ....|+.++..+ .|+||++++++|...+..
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~valK~~~~~---------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  132 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQ-PDPVVLKIGQKG---------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAIT  132 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCC-CceEEEEeCCcc---------ccHHHHHHHHhC-CCCCCcChhheEEeCCee
Confidence            345799999999999999999999988 889999975432         235699999999 999999999999887766


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus       133 ~l  134 (357)
T PHA03209        133 CM  134 (357)
T ss_pred             EE
Confidence            53

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.92  E-value=3.8e-09  Score=80.79  Aligned_cols=75  Identities=19%  Similarity=0.351  Sum_probs=63.0

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |++.+.||.|.+|.||++.+..+ +..||+|++..... .......+.+|+.+++.+ .|+||+++++++.+.+.+|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLT-GEIVALKKIRLETE-DEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCC-CCEEEEEEeecccc-cccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEE
Confidence            67788999999999999999888 99999999875432 233345788999999999 99999999999988777664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.92  E-value=3.1e-09  Score=83.31  Aligned_cols=73  Identities=42%  Similarity=0.666  Sum_probs=58.4

Q ss_pred             EeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         104 IKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++.||+|+||.||++...   .. +..||+|++.+.... .......+.+|+.+|..+ .||||++++++|...+.+||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~l   77 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADT-GKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYL   77 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCC-CCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEE
Confidence            368999999999999864   35 789999999764321 223345678999999999 99999999999998887764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.92  E-value=1.8e-09  Score=83.30  Aligned_cols=79  Identities=25%  Similarity=0.373  Sum_probs=62.0

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCC-------------CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCc
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGS-------------SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFL  163 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~-------------~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~i  163 (178)
                      ...+|++.+.||+|+||.||+|.+...             ....+|+|.+....  .......+.+|+.++..+ .|+||
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i   79 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRL-KNPNI   79 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCc
Confidence            346799999999999999999987532             02358999887542  233456789999999999 99999


Q ss_pred             cccceeEEeCCeEeC
Q psy1646         164 TALHSCFQTKVKCSF  178 (178)
Q Consensus       164 v~l~~~~~~~~~~yl  178 (178)
                      +++++++...+.+||
T Consensus        80 ~~~~~~~~~~~~~~l   94 (295)
T cd05097          80 IRLLGVCVSDDPLCM   94 (295)
T ss_pred             CeEEEEEcCCCccEE
Confidence            999999987776653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.92  E-value=4.4e-09  Score=82.38  Aligned_cols=72  Identities=49%  Similarity=0.789  Sum_probs=57.3

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHH-HHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI-LALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||+|+||.||++.+..+ +..||+|++.+...........+..|..+ +..+ .||||++++++|...+.+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~l   73 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKAD-GKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYF   73 (323)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEE
Confidence            4799999999999999988 99999999976543233344566677664 5667 99999999999998887764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.91  E-value=2.4e-09  Score=81.91  Aligned_cols=78  Identities=24%  Similarity=0.398  Sum_probs=63.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCC-----CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSD-----EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +.+++|++.+.||+|+||.||++..... +     ..+|+|.+....  .......+.+|+.++..+ .||||+++++++
T Consensus         2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~   77 (283)
T cd05048           2 IPLSAVRFLEELGEGAFGKVYKGELTGP-NERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDL-QHPNIVCLLGVC   77 (283)
T ss_pred             CChHHcchhhcccCccCCcEEEEEEecC-CCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhc-CCcccceEEEEE
Confidence            3456899999999999999999988655 4     579999886442  234456789999999999 999999999998


Q ss_pred             EeCCeEe
Q psy1646         171 QTKVKCS  177 (178)
Q Consensus       171 ~~~~~~y  177 (178)
                      ...+.+|
T Consensus        78 ~~~~~~~   84 (283)
T cd05048          78 TKEQPTC   84 (283)
T ss_pred             cCCCceE
Confidence            8776655

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.91  E-value=7.2e-09  Score=81.48  Aligned_cols=78  Identities=19%  Similarity=0.197  Sum_probs=63.8

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC-Ce
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK-VK  175 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~-~~  175 (178)
                      ..++|..+++||.|+||.||++.+..+ +..+|+|.+.+... .......+.+|+.++..+ .||||++++++|... ..
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLT-GQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLED   84 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCC-CCEEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCc
Confidence            346799999999999999999999988 99999998865322 233456788999999999 999999999998753 34


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      +|
T Consensus        85 ~~   86 (328)
T cd07856          85 IY   86 (328)
T ss_pred             EE
Confidence            44

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.91  E-value=1.9e-09  Score=81.78  Aligned_cols=77  Identities=26%  Similarity=0.408  Sum_probs=65.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..++|.+.+.||+|+||.||++.+..+ +..+|+|.+....   ......+.+|+.++..+ .||||+++++.+...+.+
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~   81 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVNT-GELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKL   81 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcCC-CcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEE
Confidence            345789999999999999999999888 9999999987542   23345678999999999 999999999999888777


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        82 ~l   83 (267)
T cd06645          82 WI   83 (267)
T ss_pred             EE
Confidence            64

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.91  E-value=7.4e-09  Score=79.56  Aligned_cols=72  Identities=19%  Similarity=0.332  Sum_probs=55.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEE
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQ  171 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~  171 (178)
                      .+|++++.||+|+||.||+|.+....+..+|+|.+..... .......+.+|+.++..+.  .||||++++++|.
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~   74 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT   74 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-CCCchHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence            3689999999999999999998543267899999875432 2333446778888877662  5999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.91  E-value=5.5e-09  Score=79.18  Aligned_cols=77  Identities=18%  Similarity=0.242  Sum_probs=63.3

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc---cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ---DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .|+..+.||+|+||.||++....+ +..+|+|++.......   ......+.+|+.+++.+ +|+||+++++++...+.+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~-~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   78 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKT-GTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHF   78 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCC-CcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeE
Confidence            377889999999999999999888 9999999987542111   12356789999999999 999999999999887766


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        79 ~~   80 (268)
T cd06630          79 NL   80 (268)
T ss_pred             EE
Confidence            53

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.90  E-value=9.8e-09  Score=84.85  Aligned_cols=77  Identities=13%  Similarity=0.168  Sum_probs=63.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ...|.+.+.||+|+||.||++....+.+..+++|.+...   .......+.+|+.+|..+ +|||||+++++|...+++|
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEE
Confidence            445999999999999999999877552567888876543   334445678899999999 9999999999999988887


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       142 l  142 (478)
T PTZ00267        142 L  142 (478)
T ss_pred             E
Confidence            5

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.90  E-value=3.3e-09  Score=80.23  Aligned_cols=76  Identities=21%  Similarity=0.384  Sum_probs=65.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|+..+.||.|+||.||++.+..+ +..+++|.+....  .......+.+|+.+++.+ .||||+++++.+...+.+||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   76 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPT-GKIMAVKTIRLEI--NEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISI   76 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCC-CcEEEEEEEeccc--ChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEE
Confidence            3688899999999999999999988 9999999987653  234556789999999999 89999999999988877664

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PTZ00284 protein kinase; Provisional

Probab=98.90  E-value=4.3e-08  Score=80.75  Aligned_cols=71  Identities=25%  Similarity=0.408  Sum_probs=55.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC------CccccceeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP------FLTALHSCF  170 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp------~iv~l~~~~  170 (178)
                      ..++|+++++||+|+||.||++.+..+ +..||||+++..    ......+..|+.++..+ .|.      +++.++++|
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~-~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKR-KEYCAVKIVRNV----PKYTRDAKIEIQFMEKV-RQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCC-CeEEEEEEEecc----hhhHHHHHHHHHHHHHH-hhcCcccCcceeeeEEEE
Confidence            357799999999999999999999888 899999999642    12234456788887777 544      578888888


Q ss_pred             EeC
Q psy1646         171 QTK  173 (178)
Q Consensus       171 ~~~  173 (178)
                      ...
T Consensus       201 ~~~  203 (467)
T PTZ00284        201 QNE  203 (467)
T ss_pred             EcC
Confidence            764

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.90  E-value=7.4e-09  Score=80.11  Aligned_cols=76  Identities=26%  Similarity=0.333  Sum_probs=62.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +...++|.+.+.||.|+||.||++.+..+ +..+++|.+..... .......+.+|+.+++.+ +|+||+++++++...
T Consensus         4 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   79 (311)
T cd07866           4 CSKLRDYEILGKLGEGTFGEVYKARQIKT-GRVVALKKILMHNE-KDGFPITALREIKILKKL-KHPNVVPLIDMAVER   79 (311)
T ss_pred             CcccccEEEEEEeccCCCEEEEEEEECCC-CcEEEEEEEEeccC-CCCcchhHHHHHHHHHhc-CCCCccchhhheecc
Confidence            33478999999999999999999999988 89999999875432 222334678999999999 999999999887543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.90  E-value=4.8e-09  Score=79.32  Aligned_cols=76  Identities=24%  Similarity=0.328  Sum_probs=62.8

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|+++++||+|+||.||++... . +..+|+|.+....    ...+.+.+|+.++..+ .|+||+++++++...+.
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~-~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   75 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYN-N-STKVAVKTLKPGT----MSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEP   75 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEec-C-CceEEEEEccCCc----hhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCC
Confidence            45678999999999999999999865 4 5679999886542    2356789999999999 99999999999887776


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        76 ~~l   78 (261)
T cd05072          76 IYI   78 (261)
T ss_pred             cEE
Confidence            553

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.90  E-value=7e-09  Score=82.01  Aligned_cols=74  Identities=23%  Similarity=0.309  Sum_probs=61.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|++++.||.|+||.||++....+ +..||+|.+..... .......+.+|+.++..+ .|+||++++++|....
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   87 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRT-GAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDL   87 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCC-CcEEEEEEeccccc-chHHHHHHHHHHHHHHhc-CCCCccceeeeecCCc
Confidence            46799999999999999999999888 99999999864321 233445788999999999 9999999999887654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=5.1e-09  Score=79.81  Aligned_cols=76  Identities=28%  Similarity=0.498  Sum_probs=64.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++.+..+ +..+|+|.+....  .......+.+|+.+++.+ .|+||++++++|.....+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   76 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRT-NQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWI   76 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCC-CeEEEEEEeeccc--cchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEE
Confidence            3688899999999999999999888 9999999987542  233456788999999999 99999999999988877664

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.90  E-value=8.4e-09  Score=79.77  Aligned_cols=75  Identities=23%  Similarity=0.357  Sum_probs=61.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..++|++.+.||.|+||.||++....+ +..+|+|.+..... .......+.+|+.+++.+ .||||+++++++...+
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   84 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKT-KQIVALKKVLMENE-KEGFPITALREIKILQLL-KHENVVNLIEICRTKA   84 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCC-CcEEEEEEEeccCC-cCCchhHHHHHHHHHHhC-CCCCccceEEEEeccc
Confidence            456799999999999999999999988 99999998865422 223334567899999999 9999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.89  E-value=6.1e-09  Score=78.97  Aligned_cols=76  Identities=25%  Similarity=0.302  Sum_probs=64.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +...+|.+.+.||.|+||.||++..... +..+|+|.+...    ......+.+|+.++..+ .|+||+++++++...+.
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   76 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPP   76 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecC-CceEEEEEecCC----chHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCC
Confidence            3456799999999999999999999888 889999988643    23356789999999999 99999999999887766


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      +|
T Consensus        77 ~~   78 (263)
T cd05052          77 FY   78 (263)
T ss_pred             cE
Confidence            55

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.89  E-value=1e-08  Score=77.41  Aligned_cols=76  Identities=25%  Similarity=0.310  Sum_probs=64.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|.+.+.||+|+||.||++....+ +..+++|.+..... .......+.+|+.+++.+ .|+||+++++++...+.+|+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l   76 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDT-GELMAVKEIRIQDN-DPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYI   76 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCC-CcEEEEEEEECccc-chHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEE
Confidence            488999999999999999999888 89999999876543 234667899999999999 99999999999887766653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.89  E-value=9.7e-09  Score=84.49  Aligned_cols=70  Identities=21%  Similarity=0.137  Sum_probs=59.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ...|.+.+.||+|+||.||++.+..+ +..||+|....         ..+.+|+.+|+.+ +|+|||++++++...+..|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~-~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~  236 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDY-PQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTC  236 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCC-CCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEE
Confidence            44699999999999999999999988 89999995321         2457899999999 9999999999988877655


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       237 l  237 (461)
T PHA03211        237 L  237 (461)
T ss_pred             E
Confidence            3

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.89  E-value=8.2e-09  Score=79.16  Aligned_cols=71  Identities=23%  Similarity=0.305  Sum_probs=56.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQT  172 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~~  172 (178)
                      .|++++.||+|+||.||++.+..+ +..+|+|.+..... .......+.+|+.++..+.  .||||++++++|..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~   73 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHS-GHFVALKSVRVQTN-EDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCAT   73 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCC-CcEEEEEEeccCcC-CCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecc
Confidence            488999999999999999999988 99999999875422 2223345677888777652  69999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.89  E-value=9.3e-09  Score=84.13  Aligned_cols=66  Identities=24%  Similarity=0.288  Sum_probs=56.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+|.++++||+|+||.||+|.+..+ +..||||.+....       ....+|+.+|..+ .|+|||+++++|..
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~-~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~  130 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDT-SEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYT  130 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCC-CCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEee
Confidence            46799999999999999999999888 8999999885431       2345799999999 99999999887653

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.88  E-value=6.2e-09  Score=81.65  Aligned_cols=72  Identities=49%  Similarity=0.792  Sum_probs=56.3

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHH-HHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR-ILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++.+..+ +..+|+|++.+...........+..|.. ++..+ .|+||++++++|...+.+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~l   73 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAE-EKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYF   73 (325)
T ss_pred             CeeeeCCCeEEEEEEECCC-CCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEE
Confidence            4799999999999999988 8999999997653322333445566655 45667 99999999999998887774

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.88  E-value=4.1e-09  Score=80.98  Aligned_cols=78  Identities=23%  Similarity=0.363  Sum_probs=62.9

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..++|++.+.||.|+||.||++.+..     + +..+|+|.+....  .......+.+|+.++..+ .||||+++++++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~-~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~   78 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEP-FTMVAVKMLKEEA--SADMQADFQREAALMAEF-DHPNIVKLLGVCA   78 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCc-ceeEEEEecCCCc--CHHHHHHHHHHHHHHHhc-CCCchheEEEEEc
Confidence            45679999999999999999998753     4 6789999886542  233456789999999999 9999999999988


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+++|+
T Consensus        79 ~~~~~~l   85 (288)
T cd05050          79 VGKPMCL   85 (288)
T ss_pred             CCCccEE
Confidence            7766553

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.88  E-value=1.4e-08  Score=77.03  Aligned_cols=73  Identities=23%  Similarity=0.378  Sum_probs=60.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+|++.+.||+|+||.||++.+..+ +..||+|.+......  .......+.+|+.++..+ .|+||+++++++.+.
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~-~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADT-GRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCC-CcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccC
Confidence            5799999999999999999999888 999999988643211  123356788999999999 999999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.88  E-value=4.1e-09  Score=81.15  Aligned_cols=78  Identities=19%  Similarity=0.313  Sum_probs=64.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC--Ce
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK--VK  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~--~~  175 (178)
                      .++|++.+.||.|.||.||+|....+ +..+++|.++.... .......+.+|+.++..+ .||||+++++++...  +.
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~   80 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKT-GEIVALKKLKMEKE-KEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDK   80 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCC-CcEEEEEEEeeccc-cccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCc
Confidence            45799999999999999999999888 89999999975533 233344678899999999 999999999998876  55


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        81 ~~l   83 (293)
T cd07843          81 IYM   83 (293)
T ss_pred             EEE
Confidence            553

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.88  E-value=1.3e-08  Score=78.22  Aligned_cols=71  Identities=21%  Similarity=0.323  Sum_probs=60.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++|+..+.||.|.||.||++.+..+ +..+|+|.+....  .......+.+|++++..+ .||||++++++|...
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~   71 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNT-GMIFALKTITTDP--NPDLQKQILRELEINKSC-KSPYIVKYYGAFLDE   71 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCC-CeEEEEEEEecCC--chHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEcc
Confidence            4689999999999999999999888 8999999987542  234456789999999999 999999999988653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.88  E-value=6.1e-09  Score=81.36  Aligned_cols=78  Identities=23%  Similarity=0.367  Sum_probs=65.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|...+.||+|+||.||++....+ +..+|+|.+.............+.+|+.++..+ .|+|++++++++...+.+||
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~-~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l  102 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRT-NEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWL  102 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCC-CcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEE
Confidence            4488899999999999999999888 899999998754332334456789999999999 99999999999988776654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG1095|consensus

Probab=98.88  E-value=4.5e-09  Score=91.84  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=64.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +.....++.+.||+|+||.||.|......+.    .||+|.+.+..  .......|++|..+|..+ +|||||+|.+++.
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKF-DHPNIVSLIGVCL  765 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCcceeeEEEeec
Confidence            4456688899999999999999998755232    48888887543  567788999999999999 9999999999998


Q ss_pred             eCCeEe
Q psy1646         172 TKVKCS  177 (178)
Q Consensus       172 ~~~~~y  177 (178)
                      +....+
T Consensus       766 ~~~~~~  771 (1025)
T KOG1095|consen  766 DSGPPL  771 (1025)
T ss_pred             CCCCcE
Confidence            865544

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.88  E-value=5.5e-09  Score=80.43  Aligned_cols=78  Identities=28%  Similarity=0.431  Sum_probs=61.9

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCC---------------CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSS---------------DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP  161 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~---------------~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp  161 (178)
                      ..++|++++.||+|+||.||++......               +..+|+|.+....  .......+.+|+.++..+ .||
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~~~   79 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRL-SDP   79 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhc-CCC
Confidence            3568999999999999999998876430               2457999887542  234567889999999999 999


Q ss_pred             CccccceeEEeCCeEe
Q psy1646         162 FLTALHSCFQTKVKCS  177 (178)
Q Consensus       162 ~iv~l~~~~~~~~~~y  177 (178)
                      ||++++++|...+.+|
T Consensus        80 ~i~~~~~~~~~~~~~~   95 (296)
T cd05051          80 NIARLLGVCTVDPPLC   95 (296)
T ss_pred             CEeEEEEEEecCCCcE
Confidence            9999999988766554

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.88  E-value=4.9e-09  Score=78.88  Aligned_cols=70  Identities=26%  Similarity=0.349  Sum_probs=58.3

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++....+ +..+|+|.+....  .......+.+|+.+++.+ .|+||+++++++...+.+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~-~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   70 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRAD-NTPVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYI   70 (252)
T ss_pred             CccCcccCccEEEEEEecC-CceEEEEecCccC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEE
Confidence            3689999999999999888 8999999876431  234456799999999999 99999999999887776654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.88  E-value=1.1e-08  Score=78.08  Aligned_cols=75  Identities=20%  Similarity=0.354  Sum_probs=62.8

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC--CeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK--VKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~--~~~yl  178 (178)
                      |++.+.||.|+||.||++....+ +..+|+|.+.... ........+.+|+.++..+ .|+|++++++++...  +.+||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~-~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKT-GELVALKKIRMEN-EKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCC-CeEEEEEEEeccc-ccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEE
Confidence            67889999999999999999988 8999999998653 1234456788999999999 999999999999877  55553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1290|consensus

Probab=98.88  E-value=2.6e-08  Score=80.35  Aligned_cols=71  Identities=24%  Similarity=0.368  Sum_probs=60.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC----CC---CccccceeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK----HP---FLTALHSCF  170 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~----hp---~iv~l~~~~  170 (178)
                      -.+|.+.++||.|.|++||+|++... .+.||+|+++..    ....+..+-||.+|.++..    |+   .||+|++.|
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~-~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F  151 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQN-KRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF  151 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccC-CeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence            37899999999999999999999999 999999998754    4567788999999999852    22   699999998


Q ss_pred             EeC
Q psy1646         171 QTK  173 (178)
Q Consensus       171 ~~~  173 (178)
                      .-.
T Consensus       152 khs  154 (590)
T KOG1290|consen  152 KHS  154 (590)
T ss_pred             eec
Confidence            753

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.88  E-value=6.8e-09  Score=79.36  Aligned_cols=70  Identities=30%  Similarity=0.511  Sum_probs=58.7

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||.|+||.||++....+ +..+|+|++.............+..|+.++..+ .||||+++++.|...+.+||
T Consensus         1 lg~g~~g~vy~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   70 (277)
T cd05577           1 LGKGGFGEVCACQVKAT-GKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCL   70 (277)
T ss_pred             CCCCCceeEEEEEEcCC-CcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEE
Confidence            69999999999999888 999999999765432334455678899999999 99999999999988877764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.88  E-value=6.3e-09  Score=79.28  Aligned_cols=80  Identities=19%  Similarity=0.243  Sum_probs=63.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +..++|.+.+.||+|+||.||++.....    .+..+|+|.+....  .......+.+|+.++..+ .|+||+++++++.
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~   79 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVS   79 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEc
Confidence            4457899999999999999999988643    03689999986442  223345788999999999 9999999999988


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ....+|+
T Consensus        80 ~~~~~~~   86 (277)
T cd05032          80 TGQPTLV   86 (277)
T ss_pred             CCCCcEE
Confidence            7766553

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.87  E-value=5.6e-09  Score=79.83  Aligned_cols=76  Identities=24%  Similarity=0.432  Sum_probs=64.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|+.++.||.|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .|+||+++++++.+.+.+||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRT-QQVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWI   79 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccC-CEEEEEEEEeccc--cHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEE
Confidence            4578889999999999999999888 8899999987542  233456789999999999 99999999999998887764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.87  E-value=3.6e-09  Score=81.21  Aligned_cols=77  Identities=18%  Similarity=0.356  Sum_probs=63.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|+..+.||+|+||.||++.+..+ +..+|+|.+.....  ......+.+|+.++..+..|+||+++++++...+..|
T Consensus         3 ~~~~~~~~~lg~G~~g~vy~~~~~~~-~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~   79 (288)
T cd06616           3 AEDLKDLGEIGRGAFGTVNKMLHKPS-GTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCW   79 (288)
T ss_pred             HHHhHHHHHhCCCCceEEEEEEECCC-CCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEE
Confidence            35677888999999999999999988 99999999875432  2445678999999999844999999999988766554

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.87  E-value=5.1e-09  Score=80.20  Aligned_cols=74  Identities=28%  Similarity=0.430  Sum_probs=63.0

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|++.+.||.|+||.||++.+..+ +..+++|.+...   .......+.+|+.++..+ .|+||++++++|...+.+|+
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~   79 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKET-GVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWI   79 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCC-CeEEEEEEeCCC---CHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEE
Confidence            478889999999999999999988 889999988644   234456788999999999 99999999999988777653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.86  E-value=1.2e-08  Score=77.24  Aligned_cols=76  Identities=24%  Similarity=0.303  Sum_probs=62.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++.+.||+|+||.||++... . +..+|+|.+....    .....+.+|+.++..+ .|+||+++++++...+.
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~-~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   75 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWN-N-TTPVAVKTLKPGT----MDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEP   75 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEec-C-CeEEEEEeeCCCc----ccHHHHHHHHHHHHHC-CCCCccceeEEEecCCC
Confidence            34567999999999999999999875 4 5679999987542    2345688999999999 99999999999888776


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +|+
T Consensus        76 ~~l   78 (261)
T cd05068          76 IYI   78 (261)
T ss_pred             eee
Confidence            664

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.86  E-value=1.3e-08  Score=78.68  Aligned_cols=82  Identities=16%  Similarity=0.290  Sum_probs=66.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .....++|++.+.||.|+||.||++.+..+ +..+|+|.+....  .......+..|+.++..+..|+||+.+++++.+.
T Consensus        10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~   86 (296)
T cd06618          10 YPADLNDLENLGEIGSGTCGQVYKMRFKKT-GHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD   86 (296)
T ss_pred             ccCCcchheeeeEeeccCCeEEEEEEECCC-CeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence            355678899999999999999999999988 8999999987543  2234456778888777774699999999999888


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      ..+|+
T Consensus        87 ~~~~~   91 (296)
T cd06618          87 SDVFI   91 (296)
T ss_pred             CeEEE
Confidence            77664

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.86  E-value=8e-09  Score=78.40  Aligned_cols=78  Identities=19%  Similarity=0.227  Sum_probs=63.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCC---eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|+..+.||+|+||.||++....+ +.   .+|+|.+....  .......+.+|+.++..+ .|+||+++.+++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   78 (268)
T cd05063           3 HPSHITKQKVIGAGEFGEVFRGILKMP-GRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKF   78 (268)
T ss_pred             ChHHceEeeEecCCCCccEEEEEEecC-CCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccC
Confidence            456799999999999999999998755 44   68999886442  233456789999999999 999999999999887


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        79 ~~~~l   83 (268)
T cd05063          79 KPAMI   83 (268)
T ss_pred             CCcEE
Confidence            76653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.86  E-value=1.1e-08  Score=76.98  Aligned_cols=77  Identities=19%  Similarity=0.217  Sum_probs=63.1

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccc--cccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI--IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +|+..++||+|+||.||+|....+ +..+++|.+.....  ........+.+|+.+++.+ .|+||+++++++.....+|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~   78 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDD-GDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLY   78 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCC-CcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEE
Confidence            377789999999999999999878 89999999865321  1123456789999999999 9999999999998877666


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        79 l   79 (258)
T cd06632          79 I   79 (258)
T ss_pred             E
Confidence            4

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.86  E-value=8.7e-09  Score=78.38  Aligned_cols=77  Identities=25%  Similarity=0.254  Sum_probs=61.3

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-------cchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-------DDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-------~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .|.+.+.||.|+||.||+|....+ +..+|+|.+.......       ....+.+..|+.++..+ +|+||+++++++..
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   79 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTT-GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETT   79 (272)
T ss_pred             ceeecceecccCceEEEEEeecCC-CceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEecc
Confidence            478889999999999999999888 8999999886421111       11234678899999999 99999999999888


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+|+
T Consensus        80 ~~~~~l   85 (272)
T cd06629          80 EEYLSI   85 (272)
T ss_pred             CCceEE
Confidence            766653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.86  E-value=8.1e-09  Score=79.43  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=61.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeC--C--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRG--S--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~--~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +..++|++.+.||+|+||.||+|..+.  .  .+..+|+|.+....  .......+.+|+.++..+ .|+||+++++++.
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   79 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGF-TCHHVVRLLGVVS   79 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEc
Confidence            345789999999999999999997652  1  14579999886442  223344688999999999 9999999999988


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+..||
T Consensus        80 ~~~~~~l   86 (288)
T cd05061          80 KGQPTLV   86 (288)
T ss_pred             CCCCcEE
Confidence            7766553

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.86  E-value=1.2e-08  Score=80.31  Aligned_cols=71  Identities=18%  Similarity=0.265  Sum_probs=60.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++|++.+.||+|+||.||++.+..+ +..||+|.+....  .......+.+|+.++..+ .|+||+++++++...
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   75 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPT-GVKVAIKKISPFE--HQTFCQRTLREIKILRRF-KHENIIGILDIIRPP   75 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCC-CCeEEEEEecccc--cchhHHHHHHHHHHHHhC-CCCCcCchhheeecc
Confidence            5799999999999999999999988 9999999986431  233456788999999999 999999999876643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.85  E-value=1.4e-08  Score=79.20  Aligned_cols=77  Identities=25%  Similarity=0.359  Sum_probs=63.9

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|...+.||.|+||.||+|....+ +..+++|.+.............+.+|+.++..+ .|+|++.+++++.+.+.+||
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~-~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   98 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHT-NEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAWL   98 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCC-CcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEE
Confidence            367778899999999999999888 899999998754332334446788999999999 99999999999998877664

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.85  E-value=1.4e-08  Score=80.43  Aligned_cols=73  Identities=25%  Similarity=0.274  Sum_probs=60.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|.+.+.||+|+||.||++....+ +..||+|.+.+... .......+.+|+.++..+ .|+||+++++++...
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~   88 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPA   88 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCC-CeEEEEEEecCcch-hhHHHHHHHHHHHHHHHc-CCCcccceeeeeeec
Confidence            47799999999999999999999888 89999999875321 223345688999999999 999999999987643

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.85  E-value=1.5e-08  Score=77.01  Aligned_cols=75  Identities=19%  Similarity=0.153  Sum_probs=61.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.+.....||+|+||.||++.+..+ +..+++|.+...   .......+.+|+.++..+ .|+||+++++++...+.+|+
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLST-QVRIAIKEIPER---DSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCC-CcEEEEEEecCC---CHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEE
Confidence            3344456899999999999999888 889999988754   234456789999999999 99999999999988777654

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.85  E-value=1.4e-08  Score=76.46  Aligned_cols=70  Identities=21%  Similarity=0.391  Sum_probs=60.1

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +|++.+.||.|+||.||++.+..+ +..+|+|.+..... .......+..|+.+++.+ .|+||+++++.+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   70 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSD-GKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KHPNIVRYYDRIID   70 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCC-CCEEEEEEEecccC-CHHHHHHHHHHHHHHHhc-CCCccceeeeeeec
Confidence            488999999999999999999888 89999999876543 344456789999999999 99999999987764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.84  E-value=1.5e-08  Score=76.53  Aligned_cols=75  Identities=23%  Similarity=0.301  Sum_probs=62.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|.+.+.||.|+||.||++... . +..+|+|.+....    .....+.+|+.++..+ .|+||+++++++.....
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~-~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   75 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN-G-TTKVAVKTLKPGT----MSPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEP   75 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc-C-CceEEEEEecCCc----cCHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCc
Confidence            45678999999999999999999876 4 5779999987542    2346789999999999 99999999999887665


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      +|
T Consensus        76 ~~   77 (261)
T cd05034          76 IY   77 (261)
T ss_pred             eE
Confidence            55

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.84  E-value=1.4e-08  Score=80.47  Aligned_cols=73  Identities=21%  Similarity=0.292  Sum_probs=61.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+|+..+.||+|+||.||++.+..+ +..+|+|.+.+... .......+.+|+.++..+ .|+||++++++|...
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   87 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVT-GQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQ   87 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCC-CCEEEEEecCcccc-ChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccC
Confidence            56799999999999999999999988 99999999864321 233456788999999999 999999999988644

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.84  E-value=4.8e-09  Score=80.06  Aligned_cols=78  Identities=24%  Similarity=0.293  Sum_probs=63.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..++|.+.+.||+|+||.||+|.+.     .. +..+|+|.+....  .......+.+|+.++..+ .|+||+++++++.
T Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   78 (280)
T cd05049           3 QRDTIVLKRELGEGAFGKVFLGECYHLEPEND-KELVAVKTLKETA--SNDARKDFEREAELLTNF-QHENIVKFYGVCT   78 (280)
T ss_pred             ChHHhhHHhhccccCCceEeeeeeccccCcCC-cceEEEEeecccC--CHHHHHHHHHHHHHHHhc-CCCCchheeeEEe
Confidence            4567999999999999999999874     23 4689999986542  233457899999999999 9999999999998


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ....+||
T Consensus        79 ~~~~~~l   85 (280)
T cd05049          79 EGDPPIM   85 (280)
T ss_pred             cCCCeEE
Confidence            8776653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.84  E-value=7.8e-09  Score=78.19  Aligned_cols=74  Identities=26%  Similarity=0.348  Sum_probs=60.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..++|.+++.||+|+||.||++....  +..+|+|.+....    .....+.+|+.++..+ .||||+++++++...+.+
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~aik~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   74 (256)
T cd05113           2 DPKDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGS----MSEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPI   74 (256)
T ss_pred             ChHHeEEeeEecCcccceEEEEEecC--CCcEEEEEcCCCc----ccHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCc
Confidence            35679999999999999999997753  4469999886442    2245689999999999 999999999998876655


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus        75 ~   75 (256)
T cd05113          75 Y   75 (256)
T ss_pred             E
Confidence            5

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.84  E-value=1e-08  Score=78.38  Aligned_cols=77  Identities=22%  Similarity=0.299  Sum_probs=62.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..+.|.+.+.||+|+||.||++.+..     . +..+++|.+....  .......+.+|+.++..+ +|+||+++++++.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~-~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~   79 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAV-ELQVAVKTLPESC--SEQDESDFLMEALIMSKF-NHQNIVRLIGVSF   79 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCC-ceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEc
Confidence            34679999999999999999999876     5 6789999876432  233345789999999999 9999999999887


Q ss_pred             eCCeEe
Q psy1646         172 TKVKCS  177 (178)
Q Consensus       172 ~~~~~y  177 (178)
                      ..+..|
T Consensus        80 ~~~~~~   85 (277)
T cd05036          80 ERLPRF   85 (277)
T ss_pred             cCCCcE
Confidence            765544

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.84  E-value=2e-08  Score=75.65  Aligned_cols=71  Identities=27%  Similarity=0.521  Sum_probs=59.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .|++++.||+|+||.||++.+..+ +..+|+|.+..... .......+.+|+.+++.+ .|+|++++++.+...
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~   71 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTD-GKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGE   71 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCC-CcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCC
Confidence            489999999999999999999888 89999999875432 234456789999999999 999999999887643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.83  E-value=1.7e-08  Score=83.88  Aligned_cols=73  Identities=23%  Similarity=0.337  Sum_probs=61.8

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..++|.+.++||+|+||.||++.+..+ +..||+|++..... .......+.+|+.++..+ .|+||++++..|..
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~-g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~  102 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSD-GEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAK  102 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCC-CCEEEEEEEecccC-CHHHHHHHHHHHHHHhcC-CCCcEEEeecceec
Confidence            346899999999999999999999988 99999999976543 344556788999999999 99999998877653

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.83  E-value=6.6e-09  Score=80.22  Aligned_cols=77  Identities=27%  Similarity=0.415  Sum_probs=60.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeC----------------CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRG----------------SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP  161 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~----------------~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp  161 (178)
                      .++|++.+.||+|+||.||++.+..                + ...+|+|.+....  .......+.+|+.++..+ .|+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l-~~~   79 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQ-PVLVAVKMLREDA--NKNARNDFLKEIKIMSRL-KDP   79 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCc-eeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCC
Confidence            3569999999999999999986432                2 3468999886542  234456789999999999 999


Q ss_pred             CccccceeEEeCCeEeC
Q psy1646         162 FLTALHSCFQTKVKCSF  178 (178)
Q Consensus       162 ~iv~l~~~~~~~~~~yl  178 (178)
                      ||+++++++...+.+|+
T Consensus        80 ~i~~~~~~~~~~~~~~l   96 (296)
T cd05095          80 NIIRLLAVCITSDPLCM   96 (296)
T ss_pred             CcceEEEEEecCCccEE
Confidence            99999999987766653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.83  E-value=2.6e-09  Score=81.77  Aligned_cols=79  Identities=23%  Similarity=0.325  Sum_probs=61.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +.+.+|.+.+.||+|+||.||+|....+    .+..+|+|.+....  .......+.+|+.++..+ .||||+++++++.
T Consensus         2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~   78 (283)
T cd05091           2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVT   78 (283)
T ss_pred             CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc
Confidence            3456788899999999999999987532    04689999987442  223346788999999999 9999999999988


Q ss_pred             eCCeEe
Q psy1646         172 TKVKCS  177 (178)
Q Consensus       172 ~~~~~y  177 (178)
                      ....+|
T Consensus        79 ~~~~~~   84 (283)
T cd05091          79 KEQPLS   84 (283)
T ss_pred             CCCceE
Confidence            766554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.83  E-value=1.2e-08  Score=77.49  Aligned_cols=72  Identities=31%  Similarity=0.430  Sum_probs=57.5

Q ss_pred             EEEeeeccCCCeeEEEEEEe----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         102 HFIKVLGKGSFGKVMLAEKR----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.+.||.|.||.||+|...    .. +..|+||.+....  .....+.+.+|+.++..+ +||||+++++++...+.++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~-~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~   77 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDK-NQPVAVKILKPSS--SEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLF   77 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSS-EEEEEEEEESTTS--SHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCC-CEEEEEEEecccc--ccccceeeeecccccccc-ccccccccccccccccccc
Confidence            56789999999999999988    23 4679999995431  334478899999999999 9999999999998655443

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=2.8e-08  Score=75.41  Aligned_cols=73  Identities=23%  Similarity=0.371  Sum_probs=60.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccc--cccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI--IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+|.+.+.||+|+||.||++.+..+ +..+|+|.+.....  ........+.+|+.++..+ .|+||+++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADT-GRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCC-CCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcC
Confidence            4799999999999999999999888 99999998754211  1223456788999999999 999999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0198|consensus

Probab=98.83  E-value=7e-09  Score=80.74  Aligned_cols=70  Identities=29%  Similarity=0.430  Sum_probs=59.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+|..++.||+|+||.||++.+..+ |..+|+|.+....   ....+.+.+|+.+|..+ .|||||++++....
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~-g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~   85 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKT-GELMAVKSVELED---SPTSESLEREIRILSRL-NHPNIVQYYGSSSS   85 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCC-Ccceeeeeeeccc---chhHHHHHHHHHHHHhC-CCCCEEeeCCcccc
Confidence            45689999999999999999999988 8999999987652   12267799999999999 89999999997443

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.83  E-value=1.3e-08  Score=77.00  Aligned_cols=71  Identities=25%  Similarity=0.397  Sum_probs=58.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +..++|+++++||.|+||.||++... . +..+|+|.+....    .....+.+|+.+++.+ .|+||+++++++...
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~-~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   73 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-G-HTKVAIKSLKQGS----MSPEAFLAEANLMKQL-QHPRLVRLYAVVTQE   73 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-C-CceEEEEEecCCC----CcHHHHHHHHHHHHhc-CCcCeeeEEEEEccC
Confidence            34567999999999999999999865 5 6789999987543    2345789999999999 999999999887543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0608|consensus

Probab=98.82  E-value=1.9e-09  Score=89.51  Aligned_cols=81  Identities=32%  Similarity=0.470  Sum_probs=73.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +...-|..++.||-|+||.|.++....+ ...||+|.|++..+....+...+..|..||... ++++||+||..|++.++
T Consensus       626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT-~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  626 MDKSMFVKIKTIGVGAFGEVCLVRKVDT-RALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDN  703 (1034)
T ss_pred             ccccceEEEeeecccccceeEEEeecch-hhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCc
Confidence            3456699999999999999999998888 889999999988887788888999999999999 99999999999999999


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      |||
T Consensus       704 LYF  706 (1034)
T KOG0608|consen  704 LYF  706 (1034)
T ss_pred             eEE
Confidence            986

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.82  E-value=2.3e-08  Score=75.44  Aligned_cols=76  Identities=24%  Similarity=0.358  Sum_probs=65.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++.+.||.|+||.||++.+..+ +..+++|.+.....  ......+.+|+.++..+ .|+||+++++++...+.+|+
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~-~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   76 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPT-GKIYALKKIHVDGD--EEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISI   76 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCC-CcEEEEEEeccCcc--hHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEE
Confidence            3689999999999999999999988 99999999876532  24467899999999999 99999999999988777664

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.82  E-value=1.7e-08  Score=77.00  Aligned_cols=75  Identities=21%  Similarity=0.404  Sum_probs=59.7

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC--CeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK--VKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~--~~~yl  178 (178)
                      |++++.||+|+||.||++....+ +..+|+|.+....  .........+|+.++..+..|+||+++++++.+.  +.+||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~-~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKT-GKYYAIKCMKKHF--KSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcCC-CcEEEEEEehhcc--CCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence            67889999999999999999888 8999999886542  1222334568999998884599999999999876  55553

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0660|consensus

Probab=98.82  E-value=6.7e-09  Score=80.63  Aligned_cols=71  Identities=23%  Similarity=0.385  Sum_probs=60.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..|..++.||+|+||.|..+.++.+ |..||||.|... +...-..++.+||+.+|+.+ +|+||+.+++.+..
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t-~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p   92 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRT-GEKVAIKKILNP-FENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRP   92 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCC-CCEeehhhhhhh-hhchHHHHHHHHHHHHHHHh-cCCCcceEEeeccc
Confidence            4466689999999999999999999 999999988632 22455678899999999999 89999999998876

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.82  E-value=1.5e-08  Score=76.05  Aligned_cols=76  Identities=29%  Similarity=0.500  Sum_probs=64.0

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||.|+||.||++.+..+ +..+++|.+..... .......+.+|+.+++.+ .|+||+++++++.....+|+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   76 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSD-NQFYALKEVDLGSM-SQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCI   76 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCC-CCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEE
Confidence            488999999999999999999888 89999999876543 234456788999999999 99999999999887766653

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0577|consensus

Probab=98.82  E-value=2e-09  Score=88.66  Aligned_cols=76  Identities=24%  Similarity=0.363  Sum_probs=62.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .|.-++.||.|+||.||-+.+..+ ...||||.+.-+..-....-..++.||..|.+| .|||+|.+.++|..+...|
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n-~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaW  102 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAW  102 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCc-cceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHH
Confidence            477788999999999999999999 999999998754321222335789999999999 9999999999998776554

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.82  E-value=2.9e-08  Score=74.39  Aligned_cols=76  Identities=20%  Similarity=0.368  Sum_probs=64.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|++.+.||.|+||.||++..... +..+++|.+..... .......+.+|++++..+ .|+|++++++++...+.+|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   76 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLET-GDFVAIKQISLEKI-KEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYI   76 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCC-CcEEEEEEeccccc-CHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEE
Confidence            488999999999999999999888 88999999876543 234567899999999999 99999999999888776653

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.81  E-value=1.2e-08  Score=77.94  Aligned_cols=78  Identities=17%  Similarity=0.202  Sum_probs=60.9

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..++|++.+.||+|+||.||++.+...    .+..+|+|.+....  .......+.+|+.++..+ .|+||+++++++..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~   80 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQ   80 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcC
Confidence            456799999999999999999986521    14679999886432  223345688999999999 99999999999887


Q ss_pred             CCeEe
Q psy1646         173 KVKCS  177 (178)
Q Consensus       173 ~~~~y  177 (178)
                      ...+|
T Consensus        81 ~~~~~   85 (277)
T cd05062          81 GQPTL   85 (277)
T ss_pred             CCCeE
Confidence            66555

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.81  E-value=2.2e-08  Score=79.86  Aligned_cols=71  Identities=17%  Similarity=0.032  Sum_probs=55.2

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeC-CCCCeEEEEeeecccc--cccchhhhHHHHHHHHHHhcCCCCccc
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRG-SSDEVYAVKVLKKDVI--IQDDDVDCTMTEKRILALAAKHPFLTA  165 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~aiK~i~~~~~--~~~~~~~~~~~Ei~il~~l~~hp~iv~  165 (178)
                      +.+....+|.+.++||+|+||+||+|.+.. + +..+|||.+.....  ........+.+|+.+|..+ .|+|++.
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~   85 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDP-GTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVP   85 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCC-CeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCc
Confidence            445556789999999999999999998876 5 77789998753210  1223456789999999999 9999985

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.81  E-value=3.2e-08  Score=74.17  Aligned_cols=76  Identities=28%  Similarity=0.527  Sum_probs=64.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|.+.+.||.|+||.||++.+..+ +..+++|.+..... .......+.+|+++++.+ .|+|++++++.+...+.+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~l   76 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSD-GKLYVLKEIDLSNM-SEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCI   76 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCC-CcEEEEEEeecccC-ChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEE
Confidence            488999999999999999999888 89999999876533 234566789999999999 99999999999887766653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.81  E-value=1.6e-08  Score=78.51  Aligned_cols=81  Identities=27%  Similarity=0.369  Sum_probs=63.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC------CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS------SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~------~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      +..++|.+.+.||+|+||.||++.+...      ....+|+|.+....  .......+.+|+.++..+..|+||++++++
T Consensus        15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            3457899999999999999999986532      02469999887542  233456788999999998679999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      +...+.+|+
T Consensus        93 ~~~~~~~~l  101 (307)
T cd05098          93 CTQDGPLYV  101 (307)
T ss_pred             EecCCceEE
Confidence            988777664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=1.5e-08  Score=77.27  Aligned_cols=76  Identities=21%  Similarity=0.365  Sum_probs=62.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~~~~~~y  177 (178)
                      .|+..+.||.|+||.||+|.+..+ +..+|+|.+....  .......+.+|+.++..+.  .|+|+++++++|.....+|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~-~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~   78 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPT-GRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW   78 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCC-CcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE
Confidence            478889999999999999999888 9999999987542  2344567889999999982  3999999999998877665


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        79 l   79 (277)
T cd06917          79 I   79 (277)
T ss_pred             E
Confidence            3

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.81  E-value=1.9e-08  Score=79.31  Aligned_cols=72  Identities=22%  Similarity=0.332  Sum_probs=60.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..|.+.+.||+|+||.||++.+..+ +..||+|.+..... .......+.+|+.++..+ .|+||+++++++...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~   76 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSET-NEKVAIKKIANAFD-NRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPP   76 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCC-CCeEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCccchHHheecc
Confidence            4699999999999999999999888 99999999875422 233345778999999999 999999999887643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.81  E-value=1.9e-08  Score=76.19  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=61.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc------cchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ------DDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~------~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .|.+...||.|+||.||+|.+..+ +..+|+|.+.......      ....+.+.+|+.++..+ .||||+++++++...
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   78 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASS-GELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDA   78 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCC-CcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeC
Confidence            377888999999999999999878 8899999886542211      12235688999999999 999999999998887


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+|+
T Consensus        79 ~~~~l   83 (267)
T cd06628          79 DHLNI   83 (267)
T ss_pred             CccEE
Confidence            76553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.81  E-value=1.5e-08  Score=79.69  Aligned_cols=71  Identities=23%  Similarity=0.279  Sum_probs=60.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ++|++.+.||.|+||.||++....+ +..||+|.+..... .......+.+|+.++..+ .|+||++++++|..
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~-~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~   75 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRS-GKKVAIKKIPHAFD-VPTLAKRTLRELKILRHF-KHDNIIAIRDILRP   75 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCC-CCEEEEEEeccccc-cccchHHHHHHHHHHHhc-CCCCccCHHHhccc
Confidence            6799999999999999999999988 99999999875422 233456788999999999 99999999988764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=1.4e-08  Score=79.69  Aligned_cols=71  Identities=35%  Similarity=0.623  Sum_probs=57.1

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||+|+||.||++.+..+ +..||+|++.+..............|..++..+.  .||||+.++.+|...+.+||
T Consensus         1 lG~G~~g~Vy~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~l   73 (330)
T cd05586           1 IGKGTFGQVYQVRKKDT-RRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYL   73 (330)
T ss_pred             CCCCCceEEEEEEECCC-CCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEE
Confidence            79999999999999988 9999999997654323334456677888877663  69999999999998887764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.80  E-value=1.6e-08  Score=76.29  Aligned_cols=73  Identities=27%  Similarity=0.423  Sum_probs=61.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..++|++.+.||.|+||.||++...   +..+|+|.+....    ...+.+.+|+.++..+ .|+||+++++++.+.+.+
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~---~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   75 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYR---GQKVAVKCLKDDS----TAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPL   75 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEec---CcEEEEEEeccch----hHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCe
Confidence            4578999999999999999999865   6789999987542    2467899999999999 999999999998876655


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus        76 ~   76 (256)
T cd05039          76 Y   76 (256)
T ss_pred             E
Confidence            5

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.80  E-value=1.4e-08  Score=77.07  Aligned_cols=72  Identities=24%  Similarity=0.322  Sum_probs=56.9

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCC--CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSS--DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      |.+++.||+|+||.||++......  +..+|+|.+..... .......+.+|+.+++.+ .|+||+++++++....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~   74 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEAS   74 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCC
Confidence            567899999999999999876430  36899999875432 234456799999999999 9999999998775533

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.80  E-value=2.6e-08  Score=76.33  Aligned_cols=70  Identities=24%  Similarity=0.353  Sum_probs=58.4

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..++|++.+.||+|+||.||++.+..+ +..+|+|++....    .....+.+|+.++..+..|+||+++++++.
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~-~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKN-GSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCC-CceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            457899999999999999999999888 8999999876431    223567889999999856999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.80  E-value=4.1e-09  Score=80.55  Aligned_cols=76  Identities=25%  Similarity=0.434  Sum_probs=63.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|...+.||+|+||.||+|.+..+ +..+|+|.+....  .......+.+|+.++..+ .|+||++++++|...+.+|+
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRT-KEVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWI   79 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCC-CeEEEEEEecccc--chHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEE
Confidence            3477788999999999999999888 8899999987542  233456789999999999 99999999999988777664

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.80  E-value=1.4e-08  Score=78.75  Aligned_cols=80  Identities=25%  Similarity=0.310  Sum_probs=63.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ...++|.+.+.||+|+||.||++...     .. +..+|+|.+....  .......+.+|+.++..+.+|+||+++++++
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  108 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDA-VMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC  108 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCc-eeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            44567999999999999999999753     23 5579999886542  2334567899999999995699999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+||
T Consensus       109 ~~~~~~~l  116 (302)
T cd05055         109 TIGGPILV  116 (302)
T ss_pred             ecCCceEE
Confidence            88776664

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.80  E-value=1.9e-08  Score=77.08  Aligned_cols=69  Identities=29%  Similarity=0.407  Sum_probs=57.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+|++++.||+|+||.||++..    ..+ +..+|+|.+...   .......+.+|+.++..+ .||||+++++++..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~-~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~   76 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNT-GEVVAVKKLQHS---TAEHLRDFEREIEILKSL-QHDNIVKYKGVCYS   76 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCC-CcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEcc
Confidence            4789999999999999999974    345 778999998654   334456789999999999 99999999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.79  E-value=2.1e-08  Score=78.83  Aligned_cols=82  Identities=27%  Similarity=0.385  Sum_probs=62.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCC------CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSS------DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~------~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      .+...+|.+++.||+|+||.||++.+....      ...+|+|.+....  .......+.+|+.++..+..|+||+++++
T Consensus         8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            344567999999999999999999865320      2368999876432  23445678999999999867999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|...+.+|+
T Consensus        86 ~~~~~~~~~l   95 (334)
T cd05100          86 ACTQDGPLYV   95 (334)
T ss_pred             EEccCCceEE
Confidence            9887776653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.79  E-value=2e-08  Score=76.07  Aligned_cols=76  Identities=21%  Similarity=0.262  Sum_probs=60.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccc---cccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI---IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~---~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      +|++.+.||.|+||.||++... + +..+|+|.+.....   ........+.+|+.++..+ .|+||++++++|...+.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~-~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   77 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-Q-GQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTI   77 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-C-CCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeE
Confidence            4788999999999999999764 6 78899998864321   1122345689999999999 999999999999887766


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        78 ~l   79 (265)
T cd06631          78 SI   79 (265)
T ss_pred             EE
Confidence            53

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.79  E-value=2e-08  Score=76.00  Aligned_cols=70  Identities=31%  Similarity=0.562  Sum_probs=59.4

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||.|+||.||++....+ +..+++|++.+...........+.+|+.++..+ .|+||+++++.+.+.+.+||
T Consensus         1 lg~g~~~~v~~~~~~~~-~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   70 (262)
T cd05572           1 LGVGGFGRVELVKVKSK-NRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYM   70 (262)
T ss_pred             CCCCCceEEEEEEECCC-CcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEE
Confidence            69999999999999988 899999999865443334557899999999999 99999999999988776654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.79  E-value=3e-08  Score=75.30  Aligned_cols=72  Identities=22%  Similarity=0.337  Sum_probs=59.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+|+..+.||+|+||.||++.+..+ +..+++|.+......  .......+.+|+.++..+ +|+||+++++++..
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   75 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDT-GRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRD   75 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCC-CcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEc
Confidence            3688999999999999999999888 899999988643211  123345788999999999 99999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.79  E-value=1.6e-08  Score=77.88  Aligned_cols=75  Identities=25%  Similarity=0.335  Sum_probs=58.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCC----CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSS----DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~----~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +|++.+.||+|+||.||+|......    ...+++|.+....  .......+.+|+.++..+ .||||+++++.|...+.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   77 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGP   77 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCC
Confidence            4788999999999999999875320    2468888876442  223356789999999999 99999999999887665


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      .|
T Consensus        78 ~~   79 (290)
T cd05045          78 LL   79 (290)
T ss_pred             cE
Confidence            54

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.79  E-value=1e-08  Score=77.39  Aligned_cols=74  Identities=24%  Similarity=0.387  Sum_probs=60.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..+|.+.+.||+|+||.||++.+. . +..+|+|.+.....    ....+.+|+.++..+ .|+||+++++++...+.+|
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~~-~-~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKWR-G-KIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIF   75 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEec-C-CccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceE
Confidence            456899999999999999999876 4 56799998865422    234688999999999 9999999999988777655


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        76 l   76 (256)
T cd05059          76 I   76 (256)
T ss_pred             E
Confidence            3

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.79  E-value=2.6e-08  Score=78.69  Aligned_cols=72  Identities=22%  Similarity=0.318  Sum_probs=60.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+|...+.||+|+||.||+|.+..+ +..+|+|.+.+... .......+.+|+.++..+ .|+||++++++|...
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~   86 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRT-GEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSA   86 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCC-CcEEEEEEecCccc-cccchhHHHHHHHHHHhc-CCCCccchhheeccc
Confidence            5799999999999999999999888 99999999875422 233345688999999999 999999999988754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.79  E-value=2.3e-08  Score=79.00  Aligned_cols=70  Identities=21%  Similarity=0.243  Sum_probs=60.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+|.+.+.||.|+||.||+|....+ +..||+|.+....   ....+.+.+|+.+++.+ .||||+++++++...
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~-~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~   74 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDC-DKRVAVKKIVLTD---PQSVKHALREIKIIRRL-DHDNIVKVYEVLGPS   74 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCC-CcEEEEEEEecCC---CchHHHHHHHHHHHHhc-CCCcchhhHhhhccc
Confidence            5799999999999999999999988 9999999987653   24456788999999999 999999999776543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.78  E-value=1.8e-08  Score=77.56  Aligned_cols=77  Identities=25%  Similarity=0.288  Sum_probs=61.8

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ...+|.+.+.||+|+||.||++...     .+ +..+|+|.+...   .......+.+|+.++..+ .|+||+++++++.
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~-~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   77 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQD-KILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGVCV   77 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCc-ceEEEEEecCCc---CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence            3457999999999999999999753     23 456899988643   234456799999999999 9999999999998


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+|+
T Consensus        78 ~~~~~~l   84 (288)
T cd05093          78 EGDPLIM   84 (288)
T ss_pred             cCCccEE
Confidence            7766653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG1006|consensus

Probab=98.78  E-value=2.2e-09  Score=80.77  Aligned_cols=81  Identities=15%  Similarity=0.285  Sum_probs=67.0

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...-++.+-+..||.|+||.|++-.++.+ |+..|||.|+...  .+....+++.|.+........||||++|+.+..++
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~s-g~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG  136 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPS-GKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG  136 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCcc-CcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence            44456677788999999999999999999 9999999998653  34566789999987666669999999999988887


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      -+||
T Consensus       137 dcWi  140 (361)
T KOG1006|consen  137 DCWI  140 (361)
T ss_pred             ceee
Confidence            7764

>KOG4257|consensus

Probab=98.78  E-value=6.4e-09  Score=86.22  Aligned_cols=75  Identities=24%  Similarity=0.333  Sum_probs=59.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC---CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS---SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~---~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..+...+.+.||.|.||.||+|.+...   ....||||..+...  .....+.|+.|..+|+.+ +|||||+|++++..
T Consensus       386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnf-dHphIikLIGv~~e  462 (974)
T KOG4257|consen  386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVE  462 (974)
T ss_pred             eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhC-CCcchhheeeeeec
Confidence            4445566678999999999999987522   13468899887654  455588999999999999 99999999999875


Q ss_pred             C
Q psy1646         173 K  173 (178)
Q Consensus       173 ~  173 (178)
                      .
T Consensus       463 ~  463 (974)
T KOG4257|consen  463 Q  463 (974)
T ss_pred             c
Confidence            4

>KOG0199|consensus

Probab=98.78  E-value=7.2e-09  Score=86.84  Aligned_cols=75  Identities=27%  Similarity=0.332  Sum_probs=61.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCC--CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      -+..++..+.++||+|.||.|++|.+...+|  ..||||+++...+  ......|++|+.+|..| .|+|+++||++..+
T Consensus       106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l--~~~mddflrEas~M~~L-~H~hliRLyGvVl~  182 (1039)
T KOG0199|consen  106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL--NAIMDDFLREASHMLKL-QHPHLIRLYGVVLD  182 (1039)
T ss_pred             eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc--chhHHHHHHHHHHHHhc-cCcceeEEeeeecc
Confidence            3556778888999999999999998874423  3689999986643  23678999999999999 99999999999875

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.78  E-value=2.4e-08  Score=76.81  Aligned_cols=82  Identities=26%  Similarity=0.376  Sum_probs=63.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      .+..++|++.+.||+|+||.||++.....    ....+|+|.+....  .......+.+|+.++..+..|+||+++++++
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   85 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVC   85 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34557799999999999999999987643    03678999887542  2334456889999999885699999999998


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+||
T Consensus        86 ~~~~~~~l   93 (293)
T cd05053          86 TQEGPLYV   93 (293)
T ss_pred             cCCCCeEE
Confidence            87766553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.78  E-value=2.5e-08  Score=76.24  Aligned_cols=73  Identities=26%  Similarity=0.361  Sum_probs=59.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +...+|++.+.||+|+||.||+|....+ +.    .+|+|.+....  .......+.+|+.++..+ .|+||+++++++.
T Consensus         4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~-~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   79 (279)
T cd05057           4 LKETELEKIKVLGSGAFGTVYKGVWIPE-GEKVKIPVAIKVLREET--SPKANKEILDEAYVMASV-DHPHVVRLLGICL   79 (279)
T ss_pred             cCHHHcEEcceecCCCCccEEEEEEecC-CCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence            3457899999999999999999998765 44    58899876542  233456789999999999 9999999999887


Q ss_pred             e
Q psy1646         172 T  172 (178)
Q Consensus       172 ~  172 (178)
                      .
T Consensus        80 ~   80 (279)
T cd05057          80 S   80 (279)
T ss_pred             c
Confidence            6

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.78  E-value=1.4e-08  Score=79.64  Aligned_cols=71  Identities=15%  Similarity=0.257  Sum_probs=58.0

Q ss_pred             eeeccC--CCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKG--SFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G--~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..||+|  +||.||++.+..+ +..||+|++..... .....+.+.+|+.++..+ +||||++++++|...+.+|+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~   76 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPT-GTLVTVRITDLENC-TEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWV   76 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCC-CcEEEEEEeccccC-CHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEE
Confidence            456766  8999999999888 99999999875432 233456788999999989 99999999999998776653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.77  E-value=2.4e-08  Score=77.50  Aligned_cols=75  Identities=27%  Similarity=0.315  Sum_probs=59.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +..++|+..+.||+|+||.||++.+..+ +.    .+|+|.+....  .......+.+|+.++..+ .|+||+++++++.
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~-~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~   79 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIWVPE-GETVKIPVAIKILNETT--GPKANVEFMDEALIMASM-DHPHLVRLLGVCL   79 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEEecC-CCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCcccEEEEEc
Confidence            4567899999999999999999998766 54    46888776432  223334688999999999 9999999999886


Q ss_pred             eCC
Q psy1646         172 TKV  174 (178)
Q Consensus       172 ~~~  174 (178)
                      ...
T Consensus        80 ~~~   82 (303)
T cd05110          80 SPT   82 (303)
T ss_pred             CCC
Confidence            543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.77  E-value=1.7e-08  Score=76.90  Aligned_cols=77  Identities=22%  Similarity=0.300  Sum_probs=61.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|+.+..||.|+||.||++..+..    ....+++|.+....  .......+.+|+.++..+ .|+||+++++++...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   80 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKL-SHKNVVRLLGLCREA   80 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhc-CCcceeeeEEEECCC
Confidence            46799999999999999999997532    04578999876432  223456799999999999 999999999998776


Q ss_pred             CeEe
Q psy1646         174 VKCS  177 (178)
Q Consensus       174 ~~~y  177 (178)
                      +.+|
T Consensus        81 ~~~~   84 (275)
T cd05046          81 EPHY   84 (275)
T ss_pred             Ccce
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.77  E-value=1.3e-08  Score=78.87  Aligned_cols=75  Identities=17%  Similarity=0.173  Sum_probs=62.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|.....||.|+||.||++....+ +..+|+|.+....   ......+.+|+.++..+ .||||+++++.|...+.+|+
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~i   95 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHS-GRQVAVKMMDLRK---QQRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWV   95 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCC-CCEEEEEEEEecc---cchHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEE
Confidence            3455566899999999999999888 8999999987542   23456788999999999 99999999999988877664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0983|consensus

Probab=98.77  E-value=4e-08  Score=74.37  Aligned_cols=80  Identities=16%  Similarity=0.328  Sum_probs=67.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...+++.+.+..||.|..|.|+++.++.+ |...|||.+.+..  .....++++..+.++....+.|+||+++++|....
T Consensus        88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~-~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~  164 (391)
T KOG0983|consen   88 QADINDLENLGDLGSGTCGQVWKMRFRST-GHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT  164 (391)
T ss_pred             ccChHHhhhHHhhcCCCccceEEEEEccc-ceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc
Confidence            34566788889999999999999999999 9999999998764  34556789999998887756999999999998765


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                      .++
T Consensus       165 dV~  167 (391)
T KOG0983|consen  165 DVF  167 (391)
T ss_pred             hHH
Confidence            443

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.77  E-value=1.8e-08  Score=75.71  Aligned_cols=74  Identities=24%  Similarity=0.408  Sum_probs=64.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++.+.||.|+||.||++....+ +..+++|.+....     ....+.+|+.+++.+ .|+||+++++++.....+|
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~-~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~   74 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKET-GQVVAIKVVPVEE-----DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLW   74 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCC-CcEEEEEEeecHH-----HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEE
Confidence            36799999999999999999999887 8899999987542     267899999999999 9999999999998887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        75 l   75 (256)
T cd06612          75 I   75 (256)
T ss_pred             E
Confidence            4

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0196|consensus

Probab=98.76  E-value=1.3e-08  Score=86.18  Aligned_cols=80  Identities=20%  Similarity=0.289  Sum_probs=67.6

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCC---CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD---EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+++......+.++||.|.||.|++|+.+.. +   ..||||.++..-  .+.+...|+.|..||-+. +||||++|-++
T Consensus       623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~p-gkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQF-dHPNIIrLEGV  698 (996)
T KOG0196|consen  623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLP-GKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIRLEGV  698 (996)
T ss_pred             hhhcChhheEEEEEEecccccceecccccCC-CCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccC-CCCcEEEEEEE
Confidence            3456677889999999999999999999866 5   589999998653  567788999999999999 99999999998


Q ss_pred             EEeCCeE
Q psy1646         170 FQTKVKC  176 (178)
Q Consensus       170 ~~~~~~~  176 (178)
                      ......+
T Consensus       699 VTks~Pv  705 (996)
T KOG0196|consen  699 VTKSKPV  705 (996)
T ss_pred             EecCcee
Confidence            8766554

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.76  E-value=5.5e-08  Score=72.77  Aligned_cols=75  Identities=25%  Similarity=0.387  Sum_probs=63.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC--CeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK--VKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~--~~~y  177 (178)
                      +|...+.||+|+||.||++....+ +..+++|++..... .......+.+|+.+++.+ .|+||+++++.+...  ..+|
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDT-GELMAVKSVELSGD-SEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCC-CcEEEEEEeecccc-chHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEE
Confidence            478899999999999999999988 89999999876532 234567899999999999 999999999998876  5554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.75  E-value=3.1e-08  Score=77.83  Aligned_cols=78  Identities=24%  Similarity=0.214  Sum_probs=60.7

Q ss_pred             CCeE-EEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccc-----------hhhhHHHHHHHHHHhcCCCCcccc
Q psy1646          99 EDFH-FIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD-----------DVDCTMTEKRILALAAKHPFLTAL  166 (178)
Q Consensus        99 ~~~~-~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~-----------~~~~~~~Ei~il~~l~~hp~iv~l  166 (178)
                      ++|. +.+.||.|+||.||++.+... +..||+|.+.........           ....+.+|+.++..+ .|+||+++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~   85 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLT-GKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMGL   85 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCC-CCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceeee
Confidence            3454 467899999999999999888 999999998654321100           112578999999999 99999999


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      +++|...+.+|+
T Consensus        86 ~~~~~~~~~~~l   97 (335)
T PTZ00024         86 VDVYVEGDFINL   97 (335)
T ss_pred             eEEEecCCcEEE
Confidence            999988777654

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.75  E-value=2.6e-08  Score=77.61  Aligned_cols=62  Identities=26%  Similarity=0.381  Sum_probs=51.2

Q ss_pred             EeeeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         104 IKVLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++||+|+||.||+|.+.  .+ +..+|+|.+....     ....+.+|+.++..+ .||||++++++|..
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~-~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~   69 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKD-DRDYALKQIEGTG-----ISMSACREIALLREL-KHPNVISLQKVFLS   69 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCC-CceEEEEEECCCC-----CcHHHHHHHHHHHhc-CCCCCcceeeeEec
Confidence            468999999999999875  35 6789999886432     234578999999999 99999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.75  E-value=2.3e-08  Score=77.74  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=64.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|...+.||+|+||.||++....+ +..+|+|.+.............+.+|+.+++.+ .|+|++++++++...+.+||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCC-CcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEE
Confidence            4488889999999999999999888 899999998753322334456788999999999 99999999999888776653

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.75  E-value=4.6e-08  Score=73.68  Aligned_cols=73  Identities=18%  Similarity=0.322  Sum_probs=60.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..+|++.+.||.|+||.||++... . +..+|+|.+.....    ....+.+|+.+++.+ .||||+++++++.....+|
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~-~-~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWL-E-KRKVAIKTIREGAM----SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPIC   75 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEe-C-CCeEEEEECCCCCC----CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceE
Confidence            457999999999999999999876 4 56899998865422    235688999999999 9999999999988776655

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.75  E-value=6.2e-08  Score=72.21  Aligned_cols=74  Identities=26%  Similarity=0.424  Sum_probs=63.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +|.+.+.||.|+||.||++....+ +..+++|.+....   ......+.+|+.++..+ .|+||+.+++++...+.+|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l   74 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRT-GKEVAIKVIKLES---KEKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWI   74 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCC-CcEEEEEEecccc---hhHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEE
Confidence            588999999999999999999888 8999999987652   24567899999999999 89999999999987766553

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.75  E-value=2.3e-08  Score=76.63  Aligned_cols=76  Identities=25%  Similarity=0.303  Sum_probs=61.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ...+|.+.++||+|+||.||++...     .. +..+|+|.+...   .......+.+|+.++..+ .|+||+++++++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   77 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQD-KMLVAVKALKEA---SESARQDFQREAELLTVL-QHQHIVRFYGVCT   77 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCC-ceEEEEEecCcC---CHHHHHHHHHHHHHHhcC-CCCCCceEEEEEe
Confidence            3467899999999999999999643     23 567899987644   344566899999999999 9999999999988


Q ss_pred             eCCeEe
Q psy1646         172 TKVKCS  177 (178)
Q Consensus       172 ~~~~~y  177 (178)
                      ..+.+|
T Consensus        78 ~~~~~~   83 (280)
T cd05092          78 EGRPLL   83 (280)
T ss_pred             cCCceE
Confidence            766655

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PHA02988 hypothetical protein; Provisional

Probab=98.74  E-value=2.4e-08  Score=76.88  Aligned_cols=72  Identities=10%  Similarity=0.010  Sum_probs=56.4

Q ss_pred             CCCCeEEE--eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFI--KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~--~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..++++..  ..||+|++|.||+|..  + |..||+|.+...........+.+.+|+.+|..+ .|||||++++++.+
T Consensus        16 ~~~~i~~~~~~~i~~g~~~~v~~~~~--~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~   89 (283)
T PHA02988         16 ESDDIDKYTSVLIKENDQNSIYKGIF--N-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIID   89 (283)
T ss_pred             CHHHcCCCCCeEEeeCCceEEEEEEE--C-CEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEe
Confidence            33444444  6889999999999987  4 789999998764322222356788999999999 99999999999876

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.74  E-value=4.7e-08  Score=75.15  Aligned_cols=78  Identities=42%  Similarity=0.724  Sum_probs=62.1

Q ss_pred             CeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .|++.+.||.|+||.||++...   .+ +..||+|++...... .....+.+.+|+.++..+.+|+||+.++++|.....
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~-g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDS-GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCC-CceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe
Confidence            4889999999999999999875   35 789999998754321 123346788999999999669999999999988777


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        80 ~~l   82 (290)
T cd05613          80 LHL   82 (290)
T ss_pred             EEE
Confidence            654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.74  E-value=3.1e-08  Score=74.44  Aligned_cols=74  Identities=27%  Similarity=0.409  Sum_probs=60.8

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCC----CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      +.+.+.||.|+||.||++..... +    ..+|+|.+....  .......+..|+.++..+ .|+||+++++.+...+.+
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   76 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGL-SGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPL   76 (258)
T ss_pred             CcccceeccCCCcceEEEEecCC-CCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCee
Confidence            35678999999999999999865 5    789999986542  222567899999999999 999999999999887665


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus        77 ~~   78 (258)
T smart00219       77 MI   78 (258)
T ss_pred             EE
Confidence            53

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.74  E-value=1.1e-08  Score=80.70  Aligned_cols=74  Identities=31%  Similarity=0.393  Sum_probs=57.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|+++++||.|+||.||+|....+    .+..||+|.+....  .......+..|+.++..+.+|+||++++++|...
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~   83 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKP   83 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence            45799999999999999999975432    04689999887432  2233457889999999986799999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.74  E-value=4.6e-08  Score=74.80  Aligned_cols=74  Identities=24%  Similarity=0.329  Sum_probs=59.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +...+|+++++||.|+||.||+|.+..+ +.    .||+|.+....  .......+.+|+.++..+ .|+||+.+++++.
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~-~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~   79 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPD-GENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGV-GSPYVCRLLGICL   79 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecC-CCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhc-CCCCCceEEEEEc
Confidence            4457899999999999999999998766 55    47999886442  233456788999999999 9999999998876


Q ss_pred             eC
Q psy1646         172 TK  173 (178)
Q Consensus       172 ~~  173 (178)
                      ..
T Consensus        80 ~~   81 (279)
T cd05109          80 TS   81 (279)
T ss_pred             CC
Confidence            53

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.74  E-value=5.9e-08  Score=73.57  Aligned_cols=72  Identities=25%  Similarity=0.434  Sum_probs=61.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|++.+.||.|+||.||++.+..+ +..+++|++....    .....+.+|+.++..+..|+||++++++|....
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~-~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   76 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKT-GQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKN   76 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCC-CcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecC
Confidence            36799999999999999999999888 8899999987542    234678899999999856999999999987644

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.74  E-value=3.8e-08  Score=75.22  Aligned_cols=74  Identities=16%  Similarity=0.240  Sum_probs=59.8

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCC---CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSS---DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~---~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..++|++.++||+|+||.||+|.+..+.   +..+++|.+....  .......+.+|+.++..+ .|+||+++++++..
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~   79 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIE   79 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence            34578999999999999999999987620   4678999876431  344567789999999999 99999999998765

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.73  E-value=4.9e-08  Score=73.90  Aligned_cols=70  Identities=27%  Similarity=0.416  Sum_probs=58.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..++|.+.+.||+|+||.||++... . +..+++|.+...    ......+.+|+.+++.+ .|+||+++++++..
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~-~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~   72 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-K-HTKVAVKTMKPG----SMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK   72 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-C-CccEEEEecCCC----hhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC
Confidence            45678999999999999999999865 3 567999988643    22346788999999999 99999999988776

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.73  E-value=3.1e-08  Score=76.74  Aligned_cols=81  Identities=26%  Similarity=0.398  Sum_probs=63.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeC-------CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccc
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRG-------SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALH  167 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~-------~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~  167 (178)
                      .+...+|.+.+.||+|+||.||++.+..       . +..+|+|.+....  .......+.+|+.++..+..||||++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~-~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~   87 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKE-AVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL   87 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCc-ceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhee
Confidence            4567789999999999999999997532       2 3478999886432  2344567899999999886799999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      +++.....+|+
T Consensus        88 ~~~~~~~~~~l   98 (304)
T cd05101          88 GACTQDGPLYV   98 (304)
T ss_pred             EEEecCCceEE
Confidence            99988776663

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.73  E-value=4.4e-08  Score=75.71  Aligned_cols=76  Identities=26%  Similarity=0.356  Sum_probs=60.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCC--eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDE--VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ++|++.++||+|+||.||++....+ +.  .+++|.+....  .......+.+|+.++..+..||||+++++++...+.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~   78 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKD-GLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL   78 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCC-CCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence            5799999999999999999998766 54  46888775321  2334567899999998885699999999998876655


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus        79 ~   79 (297)
T cd05089          79 Y   79 (297)
T ss_pred             e
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.73  E-value=2.5e-08  Score=75.11  Aligned_cols=70  Identities=37%  Similarity=0.686  Sum_probs=59.1

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||.|+||.||++.+..+ +..+++|.+.............+.+|+.++..+ .|+||+++++.+...+.+||
T Consensus         1 lg~g~~~~vy~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   70 (265)
T cd05579           1 ISKGAYGRVFLAKKKST-GDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYL   70 (265)
T ss_pred             CCCCCceEEEEEEECCC-CCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEE
Confidence            68999999999999988 999999998765432335567899999999999 99999999999888776664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG4278|consensus

Probab=98.73  E-value=9.5e-09  Score=85.35  Aligned_cols=75  Identities=25%  Similarity=0.306  Sum_probs=65.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..++....+||-|.||.||.|.++.- ...||||.++-.    .-..+.|+.|..+|+.+ .|||+|+|+++|..+..+|
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKky-slTvAVKtLKED----tMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFY  339 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFY  339 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeecc-ceeeehhhhhhc----chhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeE
Confidence            44567778999999999999999988 889999998743    34578899999999999 9999999999999888777


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       340 I  340 (1157)
T KOG4278|consen  340 I  340 (1157)
T ss_pred             E
Confidence            5

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.73  E-value=2.9e-08  Score=78.40  Aligned_cols=74  Identities=20%  Similarity=0.282  Sum_probs=61.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|.+.+.||.|+||.||++.+..+ +..+|+|.+..... .......+.+|+.+++.+ .|+||+++++++...+
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   87 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKT-GRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPAS   87 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCC-CcEEEEEecccccc-hhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccc
Confidence            46799999999999999999999988 89999998865322 233446788999999999 9999999988776544

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1989|consensus

Probab=98.73  E-value=5.4e-08  Score=82.77  Aligned_cols=70  Identities=24%  Similarity=0.385  Sum_probs=60.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      +..-.+++.++|-+|+|+.||++..... +..||+|.+-..   ++.....+.+||.+|+.|..|+|||.+++.
T Consensus        34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~-~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yids  103 (738)
T KOG1989|consen   34 VGSHRVTVEKVLAEGGFAQVYLAQDVKG-GKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDS  103 (738)
T ss_pred             ECCEEEEEEEEEccCCcEEEEEEEecCC-CceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence            4445578889999999999999999877 799999987654   567788999999999999779999999983

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.73  E-value=1e-08  Score=77.47  Aligned_cols=75  Identities=24%  Similarity=0.244  Sum_probs=62.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..+|.+++.||.|+||.||++....  +..+++|++....   ......+..|+.+++.+ .|+||+++++++...+.+|
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~--~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN--RVRVAIKILKSDD---LLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC--CCcEEEEeccccc---hhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeE
Confidence            4569999999999999999999874  5789999987552   33456788999999999 9999999999988777655


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        79 l   79 (261)
T cd05148          79 I   79 (261)
T ss_pred             E
Confidence            3

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG2345|consensus

Probab=98.72  E-value=6.5e-09  Score=77.39  Aligned_cols=72  Identities=18%  Similarity=0.270  Sum_probs=63.3

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .+.-++|.+.+.||+|+|..||++....+ +..||+|.|...   .....+..++|++..+.+ .|||+++++++..
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~-~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l   88 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLST-GHLYALKKILCH---SQEDIEEALREIDNHRKF-NSPNVLRLVDHQL   88 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCc-ccchhhheeecc---chHHHHHHHHHHHHHHhh-CCcchHHHHHHHH
Confidence            45567899999999999999999999999 999999998765   356678899999999999 9999999887643

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.72  E-value=3.5e-08  Score=77.28  Aligned_cols=72  Identities=18%  Similarity=0.288  Sum_probs=61.3

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      +|.+.+.||.|+||.||+|....+ +..+|+|.+..... .....+.+.+|+.+++.+ .|+||+++++++....
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~-~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~   72 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRT-GRKVAIKKISNVFD-DLIDAKRILREIKLLRHL-RHENIIGLLDILRPPS   72 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCC-CcEEEEEeeccccc-cchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccC
Confidence            488999999999999999999888 89999999875421 234456799999999999 9999999999887764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.72  E-value=7.5e-08  Score=73.58  Aligned_cols=73  Identities=18%  Similarity=0.282  Sum_probs=58.7

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEEeCCe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQTKVK  175 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~~~~~  175 (178)
                      |++.+.||.|+||.||++.+..+ +..+|+|.+..... .......+.+|+.++..+.  .|+||+++++++...+.
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   75 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNT-GRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT   75 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCC-CCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC
Confidence            67899999999999999999887 89999999875432 2333456778888887762  59999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.72  E-value=4.2e-08  Score=74.43  Aligned_cols=70  Identities=23%  Similarity=0.356  Sum_probs=57.0

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|.+.+.||+|+||.||++.+..+  ..+|+|.+....    .....+.+|+.++..+ .|+||+++++++...
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~--~~valK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~   73 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGT--TRVAIKTLKPGT----MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSEE   73 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCC--ceEEEEecccCc----cCHHHHHHHHHHHHhC-CCCCcceEEEEECCC
Confidence            346799999999999999999987644  469999987542    2345789999999999 999999999877543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.71  E-value=4.1e-08  Score=74.62  Aligned_cols=69  Identities=19%  Similarity=0.352  Sum_probs=58.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +.|++.+.||+|+||.||++....+ +..+|+|.+....    .....+.+|+.++..+..|+||++++++|..
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~-~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   74 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKT-GQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   74 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCC-CcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEee
Confidence            5688899999999999999999888 9999999987542    2345788999999988579999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.70  E-value=4.4e-08  Score=76.35  Aligned_cols=81  Identities=27%  Similarity=0.355  Sum_probs=61.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC------CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS------SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~------~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ...++|.+.+.||+|+||.||++.+...      ....+|+|.+....  .......+..|+.++..+..||||++++++
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV   86 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence            3456799999999999999999976321      03568999876432  233456788999999988459999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      +...+.+|+
T Consensus        87 ~~~~~~~~l   95 (314)
T cd05099          87 CTQEGPLYV   95 (314)
T ss_pred             EccCCceEE
Confidence            887776653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.69  E-value=3.5e-08  Score=75.03  Aligned_cols=69  Identities=30%  Similarity=0.421  Sum_probs=56.1

Q ss_pred             eEEEeeeccCCCeeEEEEEEeC---CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRG---SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      |.+.++||+|+||.||++....   + +..+|+|++..... .....+.+.+|+.+++.+ .||||+++++++..
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   72 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGS-FQKVAVKMLKADIF-SSSDIEEFLREAACMKEF-DHPNVIKLIGVSLR   72 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCC-ceEEEEEEeccccC-ChHHHHHHHHHHHHHhcC-CCCCcceEEEEEcc
Confidence            5678899999999999998653   4 67899999875432 334466789999999999 99999999997754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.69  E-value=2.7e-08  Score=76.88  Aligned_cols=75  Identities=17%  Similarity=0.192  Sum_probs=62.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|.....||.|+||.||++.+..+ +..+|||.+...   .....+.+.+|+.++..+ .|+||+++++.|...+.+|+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~l   96 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHT-GKQVAVKKMDLR---KQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWV   96 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCC-CCEEEEEEEecc---hHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEE
Confidence            4466677899999999999999888 899999998653   234456789999999999 99999999999888777664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.68  E-value=4.9e-08  Score=74.47  Aligned_cols=71  Identities=28%  Similarity=0.343  Sum_probs=58.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEe----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKR----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++|.+.+.||+|+||.||++...    .+ +..+|+|.+.....  ......+.+|+.++..+ .|+||+++++++..
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~-~~~~avK~~~~~~~--~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~   77 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNT-GEQVAVKSLNHSGE--EQHRSDFEREIEILRTL-DHENIVKYKGVCEK   77 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCC-ceEEEEEEeccccc--hHHHHHHHHHHHHHHhC-CCCChheEEeeeec
Confidence            356888999999999999999854    34 67899999875532  13466899999999999 99999999988876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.68  E-value=4.2e-08  Score=74.17  Aligned_cols=71  Identities=27%  Similarity=0.424  Sum_probs=58.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +..++|++++.||+|+||.||++... . +..+|+|.+.....    ....+.+|+.+++.+ .|+||+++++++...
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~-~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~   73 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWN-G-NTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVSEE   73 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEec-C-CceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEECCC
Confidence            34568999999999999999999876 4 56799999875422    245689999999999 999999999887543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.68  E-value=8.5e-08  Score=73.74  Aligned_cols=74  Identities=19%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|...+.||.|+||.||++.+..+ +..+++|.+...   .....+.+.+|+.+++.+ .|+||+++++++...+.+|+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~   93 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKST-GRQVAVKKMDLR---KQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWV   93 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCC-CCEEEEEEEecc---chhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEE
Confidence            355567999999999999999888 899999988643   233455688999999999 99999999999887776653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0614|consensus

Probab=98.68  E-value=1.3e-09  Score=88.20  Aligned_cols=85  Identities=26%  Similarity=0.441  Sum_probs=76.2

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+.+.+++.+..||-|+||.|-++..... ...+|+|+|++....+..+.+++..|-.||..+ +.|+||+||..|.
T Consensus       413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~-~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfr  490 (732)
T KOG0614|consen  413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQ-KATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFR  490 (732)
T ss_pred             hhcccchhhhhhhhhcccCccceEEEEEeccc-chHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhc
Confidence            34567789999999999999999999988766 556999999988887888899999999999999 8999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ++.++||
T Consensus       491 d~kyvYm  497 (732)
T KOG0614|consen  491 DSKYVYM  497 (732)
T ss_pred             cchhhhh
Confidence            9999886

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.68  E-value=5.4e-08  Score=74.55  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=56.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+|++++.||+|+||.||+|....+ +.    .+++|.+....  .......+..|+.++..+ .||||+++++++.
T Consensus         4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~-~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~   79 (279)
T cd05111           4 LKETELRKLKLLGSGVFGTVHKGIWIPE-GDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DHAYIVRLLGICP   79 (279)
T ss_pred             CCHhhceeccccCccCCcceEEEEEcCC-CCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcC-CCCCcceEEEEEC
Confidence            4457899999999999999999998766 65    36667664321  122345677888888999 9999999999876


Q ss_pred             eC
Q psy1646         172 TK  173 (178)
Q Consensus       172 ~~  173 (178)
                      ..
T Consensus        80 ~~   81 (279)
T cd05111          80 GA   81 (279)
T ss_pred             CC
Confidence            44

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.68  E-value=4.4e-08  Score=75.74  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=60.5

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |....+||+|+||.||++....+ +..+|+|.+...   .......+.+|+.++..+ .|+||+++++.|...+.+|+
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~-~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l   94 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSS-GKLVAVKKMDLR---KQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWV   94 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCC-CeEEEEEEeccc---chhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEE
Confidence            33446899999999999999888 999999988643   233456789999999999 99999999999988877664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.68  E-value=4.7e-08  Score=74.96  Aligned_cols=70  Identities=27%  Similarity=0.301  Sum_probs=57.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .|++++.||+|+||.||++..    ..+ +..+|+|.+....  .......+.+|+.+++.+ .|+||+++++++...
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~-~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   78 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTED   78 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCc-cceEEEEEcCccc--cHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecC
Confidence            478899999999999999974    345 7789999986442  234456789999999999 999999999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.67  E-value=4.5e-08  Score=74.81  Aligned_cols=74  Identities=30%  Similarity=0.477  Sum_probs=60.0

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-CCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-HPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-hp~iv~l~~~~~~~~~~yl  178 (178)
                      |++.+.||.|+||.||+|....+ +..+++|.+....  .........+|+..+..+ . |+||+.+++++.+.+.+|+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~-~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~~h~~i~~~~~~~~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKET-GELVAIKKMKKKF--YSWEECMNLREVKSLRKL-NEHPNIVKLKEVFRENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCC-CcEEEEEEehhhc--cchhHHHHHHHHHHHHhc-cCCCCchhHHHHhhcCCcEEE
Confidence            67889999999999999999888 8899999886542  112233456799999999 7 9999999999988776653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.67  E-value=8.6e-08  Score=74.54  Aligned_cols=62  Identities=26%  Similarity=0.393  Sum_probs=50.7

Q ss_pred             EeeeccCCCeeEEEEEEeC--CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         104 IKVLGKGSFGKVMLAEKRG--SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+||+|+||.||+|....  + +..+|+|.+....     ....+.+|+.++..+ .||||++++++|..
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~-~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~   69 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKD-EKEYALKQIEGTG-----ISMSACREIALLREL-KHPNVIALQKVFLS   69 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCc-cceEEEEEecCCC-----CcHHHHHHHHHHHhC-CCCCeeeEEEEEec
Confidence            4689999999999998753  4 5789999886432     234578999999999 99999999998854

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.67  E-value=6.3e-08  Score=73.57  Aligned_cols=68  Identities=25%  Similarity=0.347  Sum_probs=54.7

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCC--eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDE--VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      |.++++||+|+||.||+|..... +.  .+|+|.+..... .......+.+|+.++..+ .|+||+++++.+.
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~-~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   70 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQD-DSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCL   70 (272)
T ss_pred             CccccccCcccCceEEEeEEccC-CCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEc
Confidence            34678999999999999998766 54  589998865422 344567889999999999 9999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.66  E-value=4.9e-08  Score=74.25  Aligned_cols=69  Identities=22%  Similarity=0.182  Sum_probs=53.8

Q ss_pred             eeeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         105 KVLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +.||+|+||.||+|...  .+ +..+|+|.+....  .......+.+|+.++..+ +||||+++++++.....+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   71 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYT-PAQVVVKELRVSA--SVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYL   71 (269)
T ss_pred             CcccccCCceEEEEEEcCCCC-ceEEEEEecCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcE
Confidence            36899999999999764  23 4678999886542  123345788999999999 9999999999988766554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.66  E-value=6.1e-08  Score=74.67  Aligned_cols=78  Identities=24%  Similarity=0.271  Sum_probs=61.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +...+|.+.+.||+|+||.||++....     + +..+++|.+...   .....+.+.+|+.++..+ .|+||+++++++
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~   76 (291)
T cd05094           2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKD-KMLVAVKALKDP---TLAARKDFQREAELLTNL-QHEHIVKFYGVC   76 (291)
T ss_pred             CchHHeEEeeeecccCCCeEEEeEeeccCCCCc-ceeeEEEecCCc---cHHHHHHHHHHHHHHhcC-CCCCcceEEEEE
Confidence            345679999999999999999998642     3 456888887643   233446788999999999 999999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+|+
T Consensus        77 ~~~~~~~l   84 (291)
T cd05094          77 GDGDPLIM   84 (291)
T ss_pred             ccCCceEE
Confidence            87766553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.66  E-value=4.1e-08  Score=74.84  Aligned_cols=75  Identities=24%  Similarity=0.387  Sum_probs=62.6

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |+..+.||+|.||.||+|....+ +..+|+|.+.... ........+..|+.+++.+ .|+||+++++++...+.+|+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~-~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKT-GEIVALKKIRLDN-EEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCC-CcEEEEEEecccc-ccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEE
Confidence            56788999999999999999988 9999999987653 1334456788999999999 99999999999887766553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.66  E-value=6e-08  Score=72.66  Aligned_cols=70  Identities=50%  Similarity=0.817  Sum_probs=59.5

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||.|+||.||++..... +..+++|++.+...........+..|+.+++.+ .|+||+++++.+...+.+|+
T Consensus         1 lg~G~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   70 (250)
T cd05123           1 LGKGSFGKVLLVRKKDT-GKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYL   70 (250)
T ss_pred             CCCCCceEEEEEEECCC-CcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEE
Confidence            69999999999999888 899999999876443344566889999999999 99999999999988777664

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.66  E-value=2e-07  Score=71.69  Aligned_cols=71  Identities=25%  Similarity=0.389  Sum_probs=59.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|.+.+.||.|+||.||++....+ +..+|+|++....    .....+.+|+.++..+..|+|+++++++|...
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~-~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKD-GSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCC-CCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            57799999999999999999999888 9999999986432    22356778999999886799999999988753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.66  E-value=5.9e-08  Score=74.00  Aligned_cols=75  Identities=21%  Similarity=0.356  Sum_probs=62.5

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |+..+.||.|+||.||++....+ +..+++|.+..... .......+.+|+.+++.+ .|+||+++++++.+.+.+|+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~-~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLT-GEIVAIKKIKLRFE-SEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCC-CcEEEEEEeccccc-cchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEE
Confidence            56788999999999999999888 89999999875532 223456788999999999 99999999999887776653

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.65  E-value=7.7e-08  Score=72.21  Aligned_cols=68  Identities=28%  Similarity=0.377  Sum_probs=54.9

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ++||.|+||.||++... . +..+|+|.+....  .......+.+|+.++..+ .|+||+++++++...+.+|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~-~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   68 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-D-KTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIY   68 (250)
T ss_pred             CccCCCCCceEEEEEec-C-CcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccE
Confidence            37899999999999865 5 7889999886542  223345688999999999 9999999999988776655

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0986|consensus

Probab=98.65  E-value=9.9e-09  Score=82.19  Aligned_cols=82  Identities=33%  Similarity=0.527  Sum_probs=72.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+....|..-++||+|+||.|+-|..+.+ |+-||+|.+.+.++-........++|-.+|..+ ..++||.|-++|++.+
T Consensus       181 pvt~n~F~~~RvlGkGGFGEV~acqvraT-GKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd  258 (591)
T KOG0986|consen  181 PVTKNTFRVYRVLGKGGFGEVCACQVRAT-GKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKD  258 (591)
T ss_pred             hccccceeeeEEEecccccceeEEEEecc-hhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCC
Confidence            45677899999999999999999999999 999999999877664555666789999999999 9999999999999998


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       259 ~LCl  262 (591)
T KOG0986|consen  259 ALCL  262 (591)
T ss_pred             ceEE
Confidence            8875

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.65  E-value=4.4e-08  Score=77.11  Aligned_cols=75  Identities=27%  Similarity=0.381  Sum_probs=61.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|++.+.||.|+||.||+|.+..+ +..+|+|.+..... .......+.+|+.++..+.+|+||++++++|...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~-~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~   79 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRT-KEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE   79 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCC-CeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence            346799999999999999999999888 88999998854321 2333456788999999987899999999988654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0666|consensus

Probab=98.65  E-value=6.4e-09  Score=79.85  Aligned_cols=80  Identities=26%  Similarity=0.372  Sum_probs=62.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCC---CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe-
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSD---EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT-  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~-  172 (178)
                      .+..|+.++.||+|.||.||++....+..   ..+|||.++...- ..+......||+.+++.| .|+|+|.|-.+|.. 
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~   99 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLREL-KHPNVISLVKVFLSH   99 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhcc
Confidence            35679999999999999999996654412   2689998875432 345556789999999999 99999999988876 


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      +..+||
T Consensus       100 d~~v~l  105 (438)
T KOG0666|consen  100 DKKVWL  105 (438)
T ss_pred             CceEEE
Confidence            555553

>KOG0668|consensus

Probab=98.65  E-value=5.8e-09  Score=77.08  Aligned_cols=70  Identities=19%  Similarity=0.307  Sum_probs=62.0

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|++++++|+|.|+.|+.|....+ ++.+.||++++-      ..+.+.+|+.||..|+.||||++|++...++
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~-~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp  105 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITN-NEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDP  105 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCC-CceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCc
Confidence            467899999999999999999999888 899999998743      3467999999999997799999999987764

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.64  E-value=8.9e-08  Score=72.33  Aligned_cols=73  Identities=34%  Similarity=0.576  Sum_probs=54.8

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||.|+||.||+|....+ +..+|+|.+.+...........+..|..++.....|+||++++++|...+.+|+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~l   74 (260)
T cd05611           2 KPISKGAFGSVYLAKKRST-GDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYL   74 (260)
T ss_pred             ccCCcCCCeeEEEEEecCC-CCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEE
Confidence            5789999999999999888 899999998765332223334455666554443389999999999988777664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.64  E-value=1.2e-07  Score=72.09  Aligned_cols=75  Identities=21%  Similarity=0.259  Sum_probs=58.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCC--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGS--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...+|.+.+.||.|+||.||+|.+...  ....+++|.+....  .....+.+.+|+.++..+ .|+||+++++++.+..
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~   80 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQF-DHPHIVKLIGVITENP   80 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCchhceeEEEcCCC
Confidence            456799999999999999999987532  02468899876432  234456899999999999 9999999999887644

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.63  E-value=1.2e-07  Score=72.79  Aligned_cols=75  Identities=19%  Similarity=0.271  Sum_probs=64.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|+..+.||.|+||.||++.+..+ +..+++|++....   . ....+.+|+.++..+ .|+||++++++|...+.+|
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~~~~-~~~~~iK~~~~~~---~-~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   91 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATDRAT-GKEVAIKKMRLRK---Q-NKELIINEILIMKDC-KHPNIVDYYDSYLVGDELW   91 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEEccC-CcEEEEEEEecCc---h-hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEE
Confidence            35588889999999999999999888 8899999987542   1 456788999999999 9999999999998887776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        92 l   92 (286)
T cd06614          92 V   92 (286)
T ss_pred             E
Confidence            4

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.63  E-value=1.2e-07  Score=71.67  Aligned_cols=70  Identities=24%  Similarity=0.341  Sum_probs=56.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|.+...||+|+||.||++.....  ..+|+|.+....    .....+.+|+.++..+ .|+|++++++++...
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~--~~~~lK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   73 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGT--TKVAIKTLKPGT----MMPEAFLQEAQIMKKL-RHDKLVPLYAVVSEE   73 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCC--ceEEEEEcccCC----ccHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence            346799999999999999999987644  468999876432    2345788999999999 999999999887543

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.62  E-value=8.3e-08  Score=72.91  Aligned_cols=71  Identities=23%  Similarity=0.265  Sum_probs=53.3

Q ss_pred             eeeccCCCeeEEEEEEeCC-CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGS-SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||+|..... ....+++|.+....  .......+.+|+.+++.+ .|+||+++++.+.....+||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~l   72 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLL   72 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEE
Confidence            3689999999999965422 14567888765432  233445788999999999 99999999999887776654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.62  E-value=5.3e-08  Score=74.51  Aligned_cols=68  Identities=16%  Similarity=0.165  Sum_probs=51.7

Q ss_pred             eeccCCCeeEEEEEEeCCC-----------------------CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCC
Q psy1646         106 VLGKGSFGKVMLAEKRGSS-----------------------DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF  162 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~~~~-----------------------~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~  162 (178)
                      .||+|+||.||+|.....+                       ...+++|.+...   .......+.+|+.++..+ .|||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~n   77 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQV-SHIH   77 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcC-CCCC
Confidence            6899999999999754220                       135788888644   223345688899999999 9999


Q ss_pred             ccccceeEEeCCeEe
Q psy1646         163 LTALHSCFQTKVKCS  177 (178)
Q Consensus       163 iv~l~~~~~~~~~~y  177 (178)
                      |+++++++......|
T Consensus        78 iv~~~~~~~~~~~~~   92 (274)
T cd05076          78 LAFVHGVCVRGSENI   92 (274)
T ss_pred             eeeEEEEEEeCCceE
Confidence            999999998776655

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.62  E-value=1.7e-07  Score=71.96  Aligned_cols=78  Identities=40%  Similarity=0.724  Sum_probs=61.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +|++.+.||+|+||.||++...   .+ +..+|+|.+.+.... .......+.+|+.++..+.+|+||+++++.|.....
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~   79 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDA-GKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK   79 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccC-CcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE
Confidence            4889999999999999998864   34 678999998754321 223446788999999999669999999999888777


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        80 ~~l   82 (288)
T cd05583          80 LHL   82 (288)
T ss_pred             EEE
Confidence            654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.62  E-value=1.2e-07  Score=72.44  Aligned_cols=69  Identities=20%  Similarity=0.376  Sum_probs=58.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .+.|++.+.||.|+||.||++.+..+ +..+|+|++...    ......+..|+.++..+..|+||++++++|.
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   83 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKT-GQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFI   83 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCC-CcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence            46799999999999999999999888 999999998654    2234568889999888857999999999885

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.61  E-value=1.3e-07  Score=71.31  Aligned_cols=73  Identities=26%  Similarity=0.474  Sum_probs=58.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe-CC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT-KV  174 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~-~~  174 (178)
                      +...+|++.+.||+|+||.||++...   +..+|+|.+...     ...+.+.+|+.+++.+ .|+|++++++++.. .+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~   73 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKG   73 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEEc---CCcEEEEEeCCC-----chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCC
Confidence            34568999999999999999999765   568999988533     2345789999999999 99999999987643 34


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                      .+|
T Consensus        74 ~~~   76 (256)
T cd05082          74 GLY   76 (256)
T ss_pred             ceE
Confidence            444

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.61  E-value=1.2e-07  Score=72.55  Aligned_cols=69  Identities=32%  Similarity=0.466  Sum_probs=55.1

Q ss_pred             eEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      |++.+.||+|+||+||++..    ..+ +..+|+|.+....  .......+.+|+.++..+ +||||+++++++...
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   78 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGT-GEMVAVKTLKREC--GQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQ   78 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCC-CceEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence            48899999999999988653    345 7789999987542  223456788999999999 999999999987653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0584|consensus

Probab=98.61  E-value=8.6e-09  Score=85.00  Aligned_cols=73  Identities=21%  Similarity=0.283  Sum_probs=60.6

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .++..+||+|+|-+||+|.+..+ |..||.-.++..++. .....+++..|+.+|+.| .|+|||++|++|.+..+
T Consensus        42 ~k~~evLGrGafKtVYka~De~~-giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n  115 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEE-GIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDN  115 (632)
T ss_pred             eehhhhcccccceeeeecccccc-chhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCC
Confidence            45578999999999999999888 888887655543332 344568999999999999 99999999999998765

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.60  E-value=7.4e-08  Score=72.78  Aligned_cols=76  Identities=25%  Similarity=0.381  Sum_probs=58.3

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +|.+.+.||+|+||.||++..... +..+++|++......  .......+.+|+.++..+ +||||+++++++.+...+|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKA-VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFC   78 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCC-CCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceE
Confidence            488999999999999999998876 666777766532211  223344677899999999 9999999999888766554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0578|consensus

Probab=98.60  E-value=3.5e-08  Score=80.54  Aligned_cols=76  Identities=16%  Similarity=0.238  Sum_probs=66.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ...|....+||+|+-|.||.+....+ +..||||.++..   .....+-+++|+.+|+.+ .|+|||.+++.|.-.+.+|
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~-~~~VaiK~m~l~---~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLW  346 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKIST-KQEVAIKRMDLR---KQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELW  346 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccC-CceEEEEEEEec---cCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeE
Confidence            35588888999999999999999999 999999999876   345567799999999999 9999999999888777776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus       347 V  347 (550)
T KOG0578|consen  347 V  347 (550)
T ss_pred             E
Confidence            3

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.60  E-value=1.4e-07  Score=71.16  Aligned_cols=65  Identities=28%  Similarity=0.351  Sum_probs=52.9

Q ss_pred             eeeccCCCeeEEEEEEeCCCC---CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSD---EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~---~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++||+|+||.||+|..... +   ..+|+|.+.....  ......+.+|+.++..+ .|+||+++++++...
T Consensus         1 ~~ig~G~~g~v~~~~~~~~-~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~   68 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMK-SGKEVEVAVKTLKQEHI--AAGKKEFLREASVMAQL-DHPCIVRLIGVCKGE   68 (257)
T ss_pred             CccCccCceeEEEeEeecc-CCCcceEEEEecccccc--hHHHHHHHHHHHHHHhc-CCCCeeeEEEEEcCC
Confidence            4799999999999987655 4   6899999876532  13456789999999999 999999999887644

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.60  E-value=1.2e-07  Score=71.72  Aligned_cols=66  Identities=24%  Similarity=0.378  Sum_probs=52.6

Q ss_pred             eeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         106 VLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .||+|+||.||+|...  .+ +..+|+|++..... .......+.+|+.++..+ .|+||+++++++....
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   69 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKS-EKTVAVKILKNDNN-DPALKDELLREANVMQQL-DNPYIVRMIGICEAES   69 (257)
T ss_pred             cCCCcCCcceEEeEEecCCC-ceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCC
Confidence            6899999999999653  45 67899999864422 334566789999999999 9999999998876543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.59  E-value=1.5e-07  Score=71.49  Aligned_cols=78  Identities=19%  Similarity=0.345  Sum_probs=60.5

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeC-CCCCeEEEEeeecccc-------cccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRG-SSDEVYAVKVLKKDVI-------IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~aiK~i~~~~~-------~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .|++.+.||+|+||.||++.+.. . +..+|+|.+.....       ........+.+|+.++.....|+||+.++++|.
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~-~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   79 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNG-QNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL   79 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCC-CceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence            47888999999999999999987 5 78899998864321       122334567889988875339999999999998


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+|+
T Consensus        80 ~~~~~~l   86 (269)
T cd08528          80 ENDRLYI   86 (269)
T ss_pred             cCCeEEE
Confidence            8777664

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.59  E-value=9.9e-08  Score=71.89  Aligned_cols=69  Identities=23%  Similarity=0.355  Sum_probs=57.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+++|.+.+.||+|+||.||++..  . +..+|+|.+...     .....+.+|+.++..+ .|+||+++++++....
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~--~-~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~   72 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEY--T-GQKVAVKNIKCD-----VTAQAFLEETAVMTKL-HHKNLVRLLGVILHNG   72 (254)
T ss_pred             cHHHceeeeeeccCCCCceEeccc--C-CCceEEEeecCc-----chHHHHHHHHHHHHhC-CCCCcCeEEEEEcCCC
Confidence            457899999999999999999874  4 678999988643     2345789999999999 9999999999876544

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0576|consensus

Probab=98.58  E-value=4.5e-09  Score=87.40  Aligned_cols=78  Identities=27%  Similarity=0.431  Sum_probs=67.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      -..++|+++..+|.|.||.||++++..+ +...|+|+++..   .......+.+||-+++.+ +|||||.+++.|...+.
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s-~elaavkvVkLe---p~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dk   86 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRS-GELAAVKVVKLE---PGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDK   86 (829)
T ss_pred             CCccchhheeeecCCcccchhhhccccc-Cchhhheeeecc---CCccccccccceeeeecC-CCcChHHHHhhhhhhcC
Confidence            3357899999999999999999999999 999999999865   445667788999999999 99999999998877766


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        87 lwi   89 (829)
T KOG0576|consen   87 LWI   89 (829)
T ss_pred             cEE
Confidence            553

>KOG1151|consensus

Probab=98.58  E-value=4.5e-09  Score=84.16  Aligned_cols=75  Identities=21%  Similarity=0.291  Sum_probs=60.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecc--cc--cccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKD--VI--IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~--~~--~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      -++|-++.+||+|+|+.||++.+... .+.||+|+-...  .-  ......+...+|-.|++.| +||.||++|++|..+
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~E-qRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTE-QRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLD  539 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccch-hheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeeeec
Confidence            45688999999999999999999877 889999974322  11  0223456789999999999 999999999999764


Q ss_pred             C
Q psy1646         174 V  174 (178)
Q Consensus       174 ~  174 (178)
                      .
T Consensus       540 t  540 (775)
T KOG1151|consen  540 T  540 (775)
T ss_pred             c
Confidence            3

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.57  E-value=3.1e-08  Score=74.95  Aligned_cols=68  Identities=18%  Similarity=0.253  Sum_probs=53.1

Q ss_pred             eeeccCCCeeEEEEEEeCCCCC-------eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDE-------VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~-------~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +.||.|+||.||+|..... +.       .+++|.+...   .....+.+..|+.++..+ .||||+++++++......|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~-~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREV-GDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeeccc-ccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcE
Confidence            3689999999999988654 33       3777877543   233456788999999999 9999999999998766554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.57  E-value=9.7e-08  Score=85.03  Aligned_cols=70  Identities=13%  Similarity=0.148  Sum_probs=56.4

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|...++||+|+||.||+|....+ +..||+|.+....       .....|+.++..+ +|||||+++++|...+.+||
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~-~~~vavK~~~~~~-------~~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~l  760 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKN-GMQFVVKEINDVN-------SIPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYL  760 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCC-CcEEEEEEccCCc-------cccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEE
Confidence            355567899999999999999888 8999999886431       1123568899999 99999999999988776553

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.56  E-value=6.1e-08  Score=73.52  Aligned_cols=70  Identities=23%  Similarity=0.297  Sum_probs=54.8

Q ss_pred             eeeccCCCeeEEEEEEeCC-----CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGS-----SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~-----~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +.||.|+||.||++.....     .+..+|+|.+....  .......+.+|+.+++.+ .||||+++++++...+.+|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeE
Confidence            3689999999999987633     02678999886442  233456789999999999 9999999999988776655

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.55  E-value=2.8e-07  Score=70.20  Aligned_cols=70  Identities=24%  Similarity=0.312  Sum_probs=54.9

Q ss_pred             eeeccCCCeeEEEEEEeCCCCC--eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDE--VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ++||+|+||.||++....+ +.  .+++|.+....  .......+.+|+.++..+..||||++++++|...+.+|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~   72 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   72 (270)
T ss_pred             CcCCCCCCceEEEEEEcCC-CCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCce
Confidence            3689999999999998776 65  46788776321  23445678899999999877999999999988776555

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.55  E-value=1.7e-07  Score=70.67  Aligned_cols=69  Identities=35%  Similarity=0.324  Sum_probs=54.7

Q ss_pred             eeeccCCCeeEEEEEEeCCCCC--eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDE--VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ++||+|+||.||++.+....+.  .+|+|.+......  ...+.+.+|+.++..+ .|+||+++++.+.. ..+|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~   71 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLM   71 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEE
Confidence            4689999999999988652133  6899999765431  5567899999999999 99999999998876 4444

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.54  E-value=2.6e-07  Score=69.98  Aligned_cols=64  Identities=25%  Similarity=0.366  Sum_probs=51.0

Q ss_pred             eeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         106 VLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .||+|+||.||+|.+.  .. +..+|+|++....  .......+.+|+.+++.+ .|+||+++++++...
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~-~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~   67 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKK-QIDVAIKVLKNEN--EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEAE   67 (257)
T ss_pred             ccCCCCcccEEEEEEecCCC-ceeEEEEEccccc--ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcCC
Confidence            4899999999999775  33 4569999886542  233456789999999999 999999999987654

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.51  E-value=2.3e-07  Score=70.50  Aligned_cols=69  Identities=14%  Similarity=0.138  Sum_probs=51.8

Q ss_pred             eeeccCCCeeEEEEEEeCC-----------CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGS-----------SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~-----------~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +.||+|+||.||+|.....           ....+++|.+...   .......+..|+.++..+ .||||+++++++...
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~   76 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQV-SHKHIVLLYGVCVRD   76 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence            3689999999999975422           0235788887643   234455788899999999 999999999998876


Q ss_pred             CeEe
Q psy1646         174 VKCS  177 (178)
Q Consensus       174 ~~~y  177 (178)
                      ...|
T Consensus        77 ~~~~   80 (262)
T cd05077          77 VENI   80 (262)
T ss_pred             CCCE
Confidence            5544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.51  E-value=3.1e-07  Score=68.94  Aligned_cols=69  Identities=25%  Similarity=0.285  Sum_probs=56.3

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++||.|+||.||++... . +..+|+|.+.....  ......+.+|+.+++.+ .|+||+.+++++......|+
T Consensus         1 ~~lg~g~~g~v~~~~~~-~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   69 (251)
T cd05041           1 EKIGKGNFGDVYKGVLK-G-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYI   69 (251)
T ss_pred             CccccCCCceEEEEEEe-C-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEE
Confidence            47899999999999876 3 67899998875432  23456789999999999 99999999999888776553

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.50  E-value=6.8e-07  Score=65.55  Aligned_cols=73  Identities=38%  Similarity=0.562  Sum_probs=61.1

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      |.+.+.||.|+||.||++....+ +..+++|.+.....  ......+.+|+..+..+ .|+|++++++++.....+|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~-~~~~~iK~~~~~~~--~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~   73 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGT-GELVAVKVLKKEKT--EKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLY   73 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCC-CcEEEEEeeccccc--hHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceE
Confidence            56788999999999999999887 88999999876532  12567889999999999 9999999999887665544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.49  E-value=6.8e-07  Score=68.57  Aligned_cols=72  Identities=29%  Similarity=0.548  Sum_probs=51.8

Q ss_pred             eeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHh--cCCCCccccceeEEeCCeEeC
Q psy1646         106 VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA--AKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l--~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +||+|+||.||++....+ +..+|+|.+.+.............+|..++..+  ..|+||+.+++.|...+.+|+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l   74 (279)
T cd05633           1 IIGRGGFGEVYGCRKADT-GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCF   74 (279)
T ss_pred             CcccCCCeEEEEEEECCC-CcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEE
Confidence            489999999999999888 999999998765432222233345555443332  179999999999988776653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG2052|consensus

Probab=98.49  E-value=2e-07  Score=74.60  Aligned_cols=65  Identities=23%  Similarity=0.339  Sum_probs=52.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHH--hcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILAL--AAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~~hp~iv~l~~~  169 (178)
                      +....+..+.+.||+|.||.||+|.++   |+.||||++...      ....|.+|.+|...  | +|+||+.++..
T Consensus       207 RTiarqI~L~e~IGkGRyGEVwrG~wr---Ge~VAVKiF~sr------dE~SWfrEtEIYqTvmL-RHENILgFIaa  273 (513)
T KOG2052|consen  207 RTIARQIVLQEIIGKGRFGEVWRGRWR---GEDVAVKIFSSR------DERSWFRETEIYQTVML-RHENILGFIAA  273 (513)
T ss_pred             HhhhheeEEEEEecCccccceeecccc---CCceEEEEeccc------chhhhhhHHHHHHHHHh-ccchhhhhhhc
Confidence            344567899999999999999999998   779999998643      23567788877765  5 99999988764

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.49  E-value=3.8e-07  Score=69.43  Aligned_cols=70  Identities=20%  Similarity=0.269  Sum_probs=52.0

Q ss_pred             eeccCCCeeEEEEEEeCCC-CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         106 VLGKGSFGKVMLAEKRGSS-DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .||+|+||.||++...... ...+++|.+....  .......+.+|+.++..+ .||||++++++|.....+||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~l   72 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLL   72 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEE
Confidence            6899999999999765330 2345566655432  223456899999999999 99999999999887766553

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.48  E-value=7.4e-07  Score=68.27  Aligned_cols=71  Identities=28%  Similarity=0.532  Sum_probs=51.4

Q ss_pred             eeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHH---HHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         106 VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR---ILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~---il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +||+|+||.||++.+..+ ++.||+|.+.+...........+..|..   ++... .||+|+.++++|...+.+|+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~   74 (278)
T cd05606           1 IIGRGGFGEVYGCRKADT-GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSF   74 (278)
T ss_pred             CcccCCCeEEEEEEEecC-CCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEE
Confidence            489999999999999888 8999999987654321222223344443   34445 79999999999988777664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.48  E-value=4.5e-07  Score=68.03  Aligned_cols=70  Identities=27%  Similarity=0.415  Sum_probs=56.5

Q ss_pred             eeeccCCCeeEEEEEEeC---CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         105 KVLGKGSFGKVMLAEKRG---SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.||+|+||.||++....   . +..+++|.+.....  ......+.+|+.++..+ .|+||+++++++.....+||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~-~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~l   73 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGK-TTEVAVKTLKEDAS--EEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYL   73 (262)
T ss_pred             CccccCCceEEEEEEEecCCCC-CceEEeEeeccccc--hhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEE
Confidence            478999999999998862   3 56899999876532  22467899999999999 89999999999888666553

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG4279|consensus

Probab=98.48  E-value=1.3e-07  Score=79.66  Aligned_cols=66  Identities=20%  Similarity=0.261  Sum_probs=56.9

Q ss_pred             eeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646         106 VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      +||+|.||+||-|+++.+ ....|||.|...   .....+-+..||.++++| .|.|||++.+++...+++
T Consensus       582 VLGKGTYG~VYA~RD~~t-qvrIaIKEIpek---dsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~  647 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDT-QVRIAIKEIPEK---DSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFF  647 (1226)
T ss_pred             EeecCceeEEEeeccccc-eeEEEeeecccc---cchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeE
Confidence            899999999999999988 888999999754   234556788999999999 999999999998776643

>KOG1025|consensus

Probab=98.46  E-value=2e-07  Score=79.69  Aligned_cols=71  Identities=25%  Similarity=0.190  Sum_probs=57.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCC----CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...+.+++||.|+||+||+|.+... +    .+||||++....  .......++.|.-+|..+ +|||+++|++++...
T Consensus       696 telkk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s  770 (1177)
T KOG1025|consen  696 TELKKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFT--SPKASIELLDEALRMASL-DHPNLLRLLGVCMLS  770 (1177)
T ss_pred             hhhhhhceeccccceeEEeeeEecC-CceecceeEEEEeeccC--CchhhHHHHHHHHHHhcC-CCchHHHHhhhcccc
Confidence            3466678999999999999987654 4    478999886432  334467899999999999 999999999988654

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.44  E-value=4.1e-07  Score=68.71  Aligned_cols=65  Identities=28%  Similarity=0.313  Sum_probs=50.1

Q ss_pred             eeeccCCCeeEEEEEEeCC--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGS--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +.||+|+||.||+|.....  ....+|+|.+....  .......+.+|+.+++.+ +||||+++++++..
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~   67 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLP   67 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccC-CCCCcceEEEEeec
Confidence            4689999999999987532  03578999875321  233456788999999999 99999999997654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.44  E-value=3.9e-07  Score=68.55  Aligned_cols=62  Identities=21%  Similarity=0.253  Sum_probs=49.9

Q ss_pred             eeeccCCCeeEEEEEEeCCCC----------CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSD----------EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~----------~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +.||+|+||.||++.+..+ +          ..+++|.+....   .. ...+.+|+.+++.+ .|+||+++++++..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~-~~~~~~~~~~~~~v~~k~~~~~~---~~-~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   72 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQ-SDLDIVGPGQEVSVVLKVLGSDH---RD-SLAFFETASLMSQL-SHKHLVKLYGVCVR   72 (259)
T ss_pred             CcccccccceEEEEEEecc-CCccccCCccceeeeeeccccch---hh-HHHHHHHHHHHHcC-CCcchhheeeEEec
Confidence            4689999999999999866 5          347777765432   11 57789999999999 99999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PRK10345 hypothetical protein; Provisional

Probab=98.44  E-value=8.8e-07  Score=65.59  Aligned_cols=64  Identities=14%  Similarity=0.107  Sum_probs=50.2

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc----CCCCccccceeEEeCC
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA----KHPFLTALHSCFQTKV  174 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~----~hp~iv~l~~~~~~~~  174 (178)
                      ...||+|+||.||.  +..+ ... +||++....   ....+.+.+|+.++..+.    .||||+++|+++++..
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~-~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~   74 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPED-AQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC   74 (210)
T ss_pred             cceecCCCceEEEE--CCCC-cCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC
Confidence            56899999999995  6555 544 799887542   234567999999999993    3699999999999863

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.42  E-value=1.4e-06  Score=68.46  Aligned_cols=71  Identities=23%  Similarity=0.287  Sum_probs=54.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCC-CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGS-SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .|.+.+.||+|+||.||++..... .+..+|+|.+..... .......+.+|+.++..+..|+||+++++++.
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   72 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDI   72 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeee
Confidence            488999999999999999998632 156899998864321 22335678899999999856999999988643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.41  E-value=5.8e-07  Score=69.83  Aligned_cols=65  Identities=18%  Similarity=0.204  Sum_probs=51.0

Q ss_pred             CCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         111 SFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       111 ~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.||++....+ +..+|+|++..... .......+.+|+.++..+ .|+||++++++|...+.+|+
T Consensus        12 ~~~~v~~~~~~~~-~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~   76 (314)
T cd08216          12 DLMIVHLAKHKPT-NTLVAVKKINLDSC-SKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYV   76 (314)
T ss_pred             CCceEEEEEecCC-CCEEEEEEEecccc-chhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEE
Confidence            4455666666667 89999999976532 344567899999999999 99999999999988777664

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0587|consensus

Probab=98.36  E-value=1.9e-06  Score=74.01  Aligned_cols=69  Identities=23%  Similarity=0.458  Sum_probs=59.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +.|++.++||.|.+|.||++.++.+ ++..|+|++...    ...-+.+..|..+++.+++|||++.+|++|..
T Consensus        19 d~~ei~evig~Gtygkv~k~k~~~~-~~~aa~kI~~~~----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen   19 DIFEIIEVIGNGTYGKVYKGRHVKT-GQLAAIKIMDPT----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             CccEEEEEEeeccceeEEEEeeeec-CceeeeEeecCC----ccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            4599999999999999999999999 999999998754    23345677888999998899999999999865

>KOG0599|consensus

Probab=98.36  E-value=1.5e-07  Score=71.29  Aligned_cols=80  Identities=18%  Similarity=0.305  Sum_probs=65.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-----ccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-----QDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...|...+.||.|..+.|.+|.++.+ +..+|+|+|......     .....+.-.+|+.||++++.||||+.|.++|++
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t-~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKET-GKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhccc-ccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            45688889999999999999999999 999999998743211     112345568899999999999999999999998


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      +..+|+
T Consensus        95 ~sF~Fl  100 (411)
T KOG0599|consen   95 DAFVFL  100 (411)
T ss_pred             cchhhh
Confidence            877664

>KOG0596|consensus

Probab=98.33  E-value=2.4e-07  Score=75.95  Aligned_cols=80  Identities=19%  Similarity=0.187  Sum_probs=66.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +.-..|++++.||+|+-+.||++....  .+.||+|.+..... +......+.+||.+|.+|..|.+||.||++-..++.
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~--~~iyalkkv~~~~~-D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~  434 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSD--KQIYALKKVVLLEA-DNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY  434 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCC--CcchhhhHHHHhhc-CHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence            445669999999999999999998763  46677776543322 567788999999999999899999999999999999


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       435 lYm  437 (677)
T KOG0596|consen  435 LYM  437 (677)
T ss_pred             EEE
Confidence            986

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.29  E-value=2.4e-06  Score=65.14  Aligned_cols=70  Identities=20%  Similarity=0.301  Sum_probs=51.1

Q ss_pred             CeEEEee--eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKV--LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~--lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .|++.+.  ||.|+||.||++....+ +..+|+|.+......   .     .|+.+...+..|+||+++++.|...+.+|
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~k~~~~~~~~---~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPT-QKLFVQKIIKAKNFN---A-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCC-CcEEEEEEEehhhcc---h-----hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence            4555555  49999999999999988 999999998754221   1     13333332337999999999998887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        86 i   86 (267)
T PHA03390         86 L   86 (267)
T ss_pred             E
Confidence            4

>KOG0984|consensus

Probab=98.23  E-value=1.1e-06  Score=64.27  Aligned_cols=82  Identities=20%  Similarity=0.274  Sum_probs=67.8

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      -.+..++...+..||+|++|.|-+-++..+ |...|+|.+...-  .....++.++|+.+.......|++|++|+.+..+
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~s-g~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re  117 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQS-GTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE  117 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccC-CeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc
Confidence            456667788889999999999999999999 9999999997542  3555678999998776665999999999988887


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      ..+||
T Consensus       118 gdvwI  122 (282)
T KOG0984|consen  118 GDVWI  122 (282)
T ss_pred             ccEEE
Confidence            76654

>KOG0670|consensus

Probab=98.23  E-value=1.1e-06  Score=71.80  Aligned_cols=76  Identities=18%  Similarity=0.223  Sum_probs=64.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc-----CCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-----KHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----~hp~iv~l~~~~~~  172 (178)
                      -.+|.+....|+|-|++|..|.+... |..||||+|....    -..+.-+.|++||..|.     +--+++.|+..|..
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r-~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h  505 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQAR-GQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH  505 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCC-CCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence            35699999999999999999999988 8999999998654    45677889999999993     12278899999998


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .++|||
T Consensus       506 knHLCl  511 (752)
T KOG0670|consen  506 KNHLCL  511 (752)
T ss_pred             cceeEE
Confidence            888886

>KOG4645|consensus

Probab=98.16  E-value=6.9e-07  Score=79.42  Aligned_cols=75  Identities=24%  Similarity=0.274  Sum_probs=62.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +|+...+||.|.||.||.|....+ |...|+|.|..... .......+.+|..++..+ .|||+|++|++-...+.+|
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~t-GellAvKEI~iq~~-~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDT-GELLAVKEIKIQDS-DHKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCc-cchhhhhhhhcCcc-ccccCcchHHHHHHHHhc-cCccccccCceeecHHHHH
Confidence            477788999999999999999999 99999998875432 355667899999999999 9999999999866655444

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.15  E-value=4.9e-06  Score=60.67  Aligned_cols=58  Identities=19%  Similarity=0.177  Sum_probs=41.7

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccch-----------------------hhhHHHHHHHHHHhcCC
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD-----------------------VDCTMTEKRILALAAKH  160 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~-----------------------~~~~~~Ei~il~~l~~h  160 (178)
                      ...||+|+||.||+|.+. + |+.||+|+++.........                       .....+|+.++..+ .+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~-g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   78 (190)
T cd05147           2 NGCISTGKEANVYHATTA-N-GEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VT   78 (190)
T ss_pred             CCccccccceEEEEEECC-C-CCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HH
Confidence            468999999999999987 7 9999999997643211110                       11234599999999 77


Q ss_pred             CCcc
Q psy1646         161 PFLT  164 (178)
Q Consensus       161 p~iv  164 (178)
                      +++.
T Consensus        79 ~~v~   82 (190)
T cd05147          79 AGIP   82 (190)
T ss_pred             CCCC
Confidence            6653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.07  E-value=2e-05  Score=56.56  Aligned_cols=67  Identities=28%  Similarity=0.451  Sum_probs=55.2

Q ss_pred             eccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         107 LGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       107 lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ||.|.+|.||++....+ +..+++|++.....  ......+.+|+.++..+ .|++|+++++++......|
T Consensus         1 l~~g~~~~v~~~~~~~~-~~~~~~K~~~~~~~--~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~   67 (215)
T cd00180           1 LGEGGFGTVYLARDKKT-GKKVAIKIIKKEDS--SSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLY   67 (215)
T ss_pred             CCcCCceEEEEEEecCC-CcEEEEEEeccccc--hhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEE
Confidence            68999999999999877 88999999875421  11356799999999999 9999999999988755544

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0200|consensus

Probab=98.07  E-value=8.9e-06  Score=69.34  Aligned_cols=79  Identities=29%  Similarity=0.334  Sum_probs=60.8

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCC------CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSS------DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~------~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ..+...+.+.||+|.||+|+++......      ...||+|.+....  .....+.+..|+.+|..+..|+||+.|.+++
T Consensus       294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~llG~~  371 (609)
T KOG0200|consen  294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNLLGAC  371 (609)
T ss_pred             chhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence            3344566779999999999999754210      2468999886543  3366788999999999998899999999998


Q ss_pred             EeCCeEe
Q psy1646         171 QTKVKCS  177 (178)
Q Consensus       171 ~~~~~~y  177 (178)
                      ...+.+|
T Consensus       372 t~~~~~~  378 (609)
T KOG0200|consen  372 TQDGPLY  378 (609)
T ss_pred             ccCCceE
Confidence            8766554

>KOG0604|consensus

Probab=98.06  E-value=3.7e-06  Score=64.59  Aligned_cols=69  Identities=26%  Similarity=0.404  Sum_probs=58.3

Q ss_pred             CCCCCCeEE-EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHF-IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~-~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ....++|.+ -.+||-|-.|+|..|.++.+ ++.+|+|++.-.        .+..+|++++-..+.|||||.++++|+.
T Consensus        57 ~~itedY~is~qvLG~GinGkV~~C~~k~T-~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeN  126 (400)
T KOG0604|consen   57 YSITEDYSISWQVLGAGINGKVVQCVHKRT-QEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYEN  126 (400)
T ss_pred             ccchhhheehhhhhccccCCceEEEEeccc-hhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhh
Confidence            334677887 47999999999999999999 999999998532        4567999999888899999999998874

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.06  E-value=9.4e-06  Score=67.56  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=50.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEe----------------CCCCCeEEEEeeecccccc-----------cchhh
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKR----------------GSSDEVYAVKVLKKDVIIQ-----------DDDVD  145 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~----------------~~~~~~~aiK~i~~~~~~~-----------~~~~~  145 (178)
                      ..++..++|++.++||+|+||.||+|...                .. +..||||.+.......           ....+
T Consensus       139 ~~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~-~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e  217 (507)
T PLN03224        139 NSRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQK-KRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAE  217 (507)
T ss_pred             CCCccccCceEeeEeecCCCeEEEEEEecccccchhhhhcccccccc-CceEEEEEecccchhhHHHHHhhhhhhhcccc
Confidence            34567889999999999999999999752                23 4579999986431100           01122


Q ss_pred             hHHHHHHHHHHhcCCCCc-----cccceeEE
Q psy1646         146 CTMTEKRILALAAKHPFL-----TALHSCFQ  171 (178)
Q Consensus       146 ~~~~Ei~il~~l~~hp~i-----v~l~~~~~  171 (178)
                      ....|+..+..+ .|.++     +.+.++|.
T Consensus       218 ~~~vE~~~l~~l-~~~~l~~~~~~~~lg~~~  247 (507)
T PLN03224        218 TGMVEAYMCAKI-KRNPIAAASCAEYLGYFT  247 (507)
T ss_pred             hhHHHHHHHHHh-hcccchhhhhhhhhhhcc
Confidence            345577777777 56544     45555543

>KOG0671|consensus

Probab=98.05  E-value=1.7e-06  Score=68.11  Aligned_cols=78  Identities=22%  Similarity=0.388  Sum_probs=62.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc-CCC----CccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-KHP----FLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-~hp----~iv~l~~~~  170 (178)
                      +-..+|.++..||+|.||+|..|++..+ +..||+|+|+.-    ....+..+-|+.+|.++. ..|    -+|.+.++|
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~-~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF  160 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRET-KEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF  160 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCC-CceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh
Confidence            3467899999999999999999999999 999999998632    344567788999999983 222    367788888


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+++||
T Consensus       161 dyrghiCi  168 (415)
T KOG0671|consen  161 DYRGHICI  168 (415)
T ss_pred             hccCceEE
Confidence            88887764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.05  E-value=2.5e-05  Score=58.55  Aligned_cols=72  Identities=17%  Similarity=0.074  Sum_probs=55.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhh------HHHHHHHHHHhcCCCCccccceeEE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDC------TMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~------~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      -.+|..+++||.|+||.||+...  + +..+|+|++.......+.....      +.+|+..+..| .|++|..+..++.
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~-~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~  105 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--D-YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL  105 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--C-CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence            46799999999999999999655  4 5679999997543322232233      57899999999 9999999988876


Q ss_pred             eC
Q psy1646         172 TK  173 (178)
Q Consensus       172 ~~  173 (178)
                      ..
T Consensus       106 ~~  107 (232)
T PRK10359        106 LA  107 (232)
T ss_pred             ec
Confidence            54

>KOG0669|consensus

Probab=98.03  E-value=5.3e-08  Score=73.01  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=60.6

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...-.+.|+...+||.|.||.||+++.+.+ |+.||+|.+--.. ...+.....++|+.+|..| .|+|++.|.++|..
T Consensus        12 ~~~~~~~yek~~kigqGtfgeVFkAr~~n~-~kkvalkkvlmen-eKeGfpitalreikiL~~l-kHenv~nliEic~t   87 (376)
T KOG0669|consen   12 FCDEVSKYEKLAKIGQGTFGEVFKARSKNT-GKKVALKKVLMEN-EKEGFPITALREIKILQLL-KHENVVNLIEICRT   87 (376)
T ss_pred             ceecchHHHHHHhcCCchHHHHHHHhhcCc-cchhHHHHHHHhc-cccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhh
Confidence            344456788899999999999999999988 9999987653211 1345566789999999999 99999999887653

>KOG3653|consensus

Probab=98.02  E-value=3.7e-06  Score=67.90  Aligned_cols=66  Identities=24%  Similarity=0.445  Sum_probs=51.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc-CCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-KHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-~hp~iv~l~~~~~  171 (178)
                      .+....++.+||+|.||.||+|...   ++.||||+++-.      ....|.+|-.|..... .|+||++++.+-.
T Consensus       208 ~l~pl~l~eli~~Grfg~V~KaqL~---~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ek  274 (534)
T KOG3653|consen  208 ELDPLQLLELIGRGRFGCVWKAQLD---NRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEK  274 (534)
T ss_pred             cCCchhhHHHhhcCccceeehhhcc---CceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhc
Confidence            3666788899999999999999976   679999998643      3456777777766431 8999999886543

>KOG1163|consensus

Probab=98.00  E-value=2e-05  Score=59.11  Aligned_cols=72  Identities=15%  Similarity=0.224  Sum_probs=54.7

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +.-+....|.+++.||.|+||.+|++..... |..||||+=..     .....++..|..+-..|.....|..+..++
T Consensus         9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~-ge~VAiK~Es~-----~a~hpqL~yEskvY~iL~~g~GiP~i~~y~   80 (341)
T KOG1163|consen    9 EELIVGGKYKLVRKIGSGSFGDIYLGISITS-GEEVAIKLESS-----KAKHPQLLYESKVYRILQGGVGIPHIRHYG   80 (341)
T ss_pred             hhheeccceEEEEeecCCchhheeeeeeccC-CceEEEEeecc-----cCCCcchhHHHHHHHHhccCCCCchhhhhc
Confidence            3445678899999999999999999999988 99999996432     223456888999888884444555555444

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.95  E-value=3.3e-05  Score=56.16  Aligned_cols=60  Identities=20%  Similarity=0.106  Sum_probs=43.5

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccc-----------------------hhhhHHHHHHHHHHhcCC
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD-----------------------DVDCTMTEKRILALAAKH  160 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~-----------------------~~~~~~~Ei~il~~l~~h  160 (178)
                      .+.||+|+||.||+|.+. + |..||||+++........                       ......+|...+..+ .|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~-g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   78 (190)
T cd05145           2 NGCISTGKEANVYHARTG-D-GEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YE   78 (190)
T ss_pred             CceeecCCCcEEEEEEcC-C-CCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-Hh
Confidence            468999999999999987 7 999999999865210000                       011235788999999 88


Q ss_pred             CCcccc
Q psy1646         161 PFLTAL  166 (178)
Q Consensus       161 p~iv~l  166 (178)
                      +++...
T Consensus        79 ~~i~~p   84 (190)
T cd05145          79 AGVPVP   84 (190)
T ss_pred             CCCCCc
Confidence            886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG4721|consensus

Probab=97.86  E-value=4.9e-06  Score=68.97  Aligned_cols=68  Identities=24%  Similarity=0.334  Sum_probs=53.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +.++.+.-++-||.|+-|.||+|..+   ++.||||.++.-          -..+|+-|++| .|+||+.+.++|....-
T Consensus       121 iPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV~el----------kETdIKHLRkL-kH~NII~FkGVCtqsPc  186 (904)
T KOG4721|consen  121 IPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKKVREL----------KETDIKHLRKL-KHPNIITFKGVCTQSPC  186 (904)
T ss_pred             CCHHHhhhhhhhccCcccceeeeecc---CceehhHHHhhh----------hhhhHHHHHhc-cCcceeeEeeeecCCce
Confidence            44555555678999999999999987   678999987632          12578889999 99999999999987654


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      +|
T Consensus       187 yC  188 (904)
T KOG4721|consen  187 YC  188 (904)
T ss_pred             eE
Confidence            44

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.82  E-value=7.9e-05  Score=57.59  Aligned_cols=75  Identities=12%  Similarity=0.074  Sum_probs=45.4

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCC--CCeEEEEeeeccccc--ccc------hhhhHHHHHHHHHHhcCCCCcccc
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSS--DEVYAVKVLKKDVII--QDD------DVDCTMTEKRILALAAKHPFLTAL  166 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~--~~~~aiK~i~~~~~~--~~~------~~~~~~~Ei~il~~l~~hp~iv~l  166 (178)
                      ....|++.++||+|+||.||+|.+..+.  +..+++|+.......  .+.      .......+...+..+ .|++|+.+
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~   88 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPKY   88 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCcE
Confidence            3467999999999999999999876430  234566654322100  000      001122333344556 89999999


Q ss_pred             ceeEEe
Q psy1646         167 HSCFQT  172 (178)
Q Consensus       167 ~~~~~~  172 (178)
                      ++++..
T Consensus        89 ~~~~~~   94 (294)
T PHA02882         89 YGCGSF   94 (294)
T ss_pred             EEeeeE
Confidence            886554

>KOG1167|consensus

Probab=97.82  E-value=6.3e-06  Score=65.49  Aligned_cols=73  Identities=18%  Similarity=0.315  Sum_probs=61.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeC---CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRG---SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~---~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...|.++++||+|.|+.||++.+..   . ...||+|.|...     ....++.+|+++|..+..+.||+.+.+++.-.+
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~-~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTK-RRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccc-cceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            4568999999999999999998775   5 789999998753     345679999999999988999999999887766


Q ss_pred             eE
Q psy1646         175 KC  176 (178)
Q Consensus       175 ~~  176 (178)
                      .+
T Consensus       109 ~v  110 (418)
T KOG1167|consen  109 QV  110 (418)
T ss_pred             ee
Confidence            54

>KOG1345|consensus

Probab=97.81  E-value=3.4e-06  Score=64.07  Aligned_cols=71  Identities=25%  Similarity=0.348  Sum_probs=59.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee-EEeCC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC-FQTKV  174 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~-~~~~~  174 (178)
                      +.|.+.+.||+|-||++.+|+++.+ ...+++|.+++.    ......|.+|...-..|+.|.||+.-|++ |++.+
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s-~t~ivlKavp~p----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d   95 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQS-KTRIVLKAVPRP----QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD   95 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCC-ceEEEeeccCcc----hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence            5599999999999999999999999 999999999764    34567899999877777789999988864 55444

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.80  E-value=7.1e-05  Score=55.14  Aligned_cols=63  Identities=35%  Similarity=0.496  Sum_probs=51.7

Q ss_pred             CCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         111 SFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       111 ~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +||.||++....+ +..+++|++.....  ......+.+|+.++..+ .|+||+++++.+......|
T Consensus         1 ~~g~v~~~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~   63 (244)
T smart00220        1 SFGKVYLARDKKT-GKLVAIKVIKKEKI--KKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLY   63 (244)
T ss_pred             CceEEEEEEECCC-CcEEEEEEeccccc--ccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEE
Confidence            5899999999888 89999999876532  11167899999999999 9999999999888765544

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0603|consensus

Probab=97.79  E-value=5.5e-05  Score=63.08  Aligned_cols=74  Identities=28%  Similarity=0.396  Sum_probs=61.9

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..+.|++...+|.|+|+.|..|.+..+ ++.+++|++.+..       .....|+.++.....|+||+++++.|.+..++
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t-~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~  391 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPT-DQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEI  391 (612)
T ss_pred             cchhhccccccCCCCccceeeeecccc-ccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCcee
Confidence            567899999999999999999999999 9999999997651       23346776666666999999999999998888


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      |+
T Consensus       392 ~~  393 (612)
T KOG0603|consen  392 YL  393 (612)
T ss_pred             ee
Confidence            74

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=97.78  E-value=6e-05  Score=56.33  Aligned_cols=59  Identities=19%  Similarity=0.251  Sum_probs=46.6

Q ss_pred             CCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         110 GSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       110 G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |.||.||++.+..+ +..+|+|.+....        ...+|...+... .||||+++++++...+.+||
T Consensus         4 g~~~~v~~~~~~~~-~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l   62 (237)
T cd05576           4 GVIDKVLLVMDTRT-QQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFL   62 (237)
T ss_pred             cccceEEEEEEccC-CcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEE
Confidence            88999999999999 9999999987542        123455555556 89999999999988777664

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1165|consensus

Probab=97.74  E-value=0.00015  Score=56.74  Aligned_cols=69  Identities=19%  Similarity=0.181  Sum_probs=51.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +.--.|.++++||+|+||..++|...-+ ++.||||.=+..     ...-++.-|-...+.|...+.|...|++-
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~n-ne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFG   93 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYN-NEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFG   93 (449)
T ss_pred             EecccceeccccccCcceeeeccccccc-CceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeec
Confidence            4455799999999999999999999999 999999964422     12334566766666665677777766543

>KOG1164|consensus

Probab=97.72  E-value=0.00012  Score=57.55  Aligned_cols=67  Identities=24%  Similarity=0.355  Sum_probs=51.0

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCC-CeEEEEeeecccccccchhhhHHHHHHHHHHhcC---CCCccccceeE
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSD-EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK---HPFLTALHSCF  170 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~-~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~---hp~iv~l~~~~  170 (178)
                      .|.+.+.||+|+||.||++..... + ..+|+|+.....   ......+..|+.++..+..   ..++..+++..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~-~~~~~a~K~e~~~~---~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G   89 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSE-KNKEYAKKLEKKEL---GSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHG   89 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCC-CCeeEEEEEEEecc---cCCCccchhHHHHHHHHhhhcCCCCCCEEEEec
Confidence            799999999999999999998865 4 578888876542   1222268889999999831   25777777777

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.71  E-value=9.4e-05  Score=54.26  Aligned_cols=67  Identities=15%  Similarity=0.098  Sum_probs=47.2

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-----cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-----DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +.||+|+||.||+|..  . +..+++|.........     ......+.+|+.++..+ .|++|+....++.+.+.
T Consensus         2 ~~l~~G~~~~vy~~~~--~-~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~   73 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--L-GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPEN   73 (211)
T ss_pred             cccccCceEEEEEEee--C-CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCC
Confidence            5799999999999987  4 6689999765332111     11234688999999999 88888766655544443

>KOG0664|consensus

Probab=97.67  E-value=8e-06  Score=62.20  Aligned_cols=72  Identities=19%  Similarity=0.230  Sum_probs=57.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+.+..+.||=|+||.||.+.+..+ |+.+|+|.+..- +..-..-+++.+|+.+|.-. .|.|++.+.+.....
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRd-grrvalkK~pnv-fq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPp  124 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRS-GKRVALKKMPNV-FQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPA  124 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCC-ccchhHhhcchH-HHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCC
Confidence            4567778999999999999999988 999999977532 11223457899999999999 999999888776544

>smart00090 RIO RIO-like kinase

Probab=97.65  E-value=0.00015  Score=54.77  Aligned_cols=59  Identities=19%  Similarity=0.010  Sum_probs=43.9

Q ss_pred             CeEEEeeeccCCCeeEEEEE-EeCCCCCeEEEEeeecccccccc---------------------hhhhHHHHHHHHHHh
Q psy1646         100 DFHFIKVLGKGSFGKVMLAE-KRGSSDEVYAVKVLKKDVIIQDD---------------------DVDCTMTEKRILALA  157 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~-~~~~~~~~~aiK~i~~~~~~~~~---------------------~~~~~~~Ei~il~~l  157 (178)
                      .|.+.+.||+|+||.||+|. +..+ |..||+|+++........                     ....+.+|+.++..+
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~-g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGS-GKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCC-CcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            47888999999999999998 6667 899999998754210000                     112356899999999


Q ss_pred             cCC
Q psy1646         158 AKH  160 (178)
Q Consensus       158 ~~h  160 (178)
                       .+
T Consensus       108 -~~  109 (237)
T smart00090      108 -YE  109 (237)
T ss_pred             -Hh
Confidence             55

>KOG1027|consensus

Probab=97.64  E-value=2.5e-05  Score=66.97  Aligned_cols=69  Identities=25%  Similarity=0.230  Sum_probs=57.2

Q ss_pred             eEEEeeeccCCCee-EEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         101 FHFIKVLGKGSFGK-VMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       101 ~~~~~~lG~G~fg~-V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      |.--+++|.|+-|+ ||+|...   ++.||||.+-..      ......+||.+|+....|||||++|+.-.++.++||
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye---~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YI  580 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE---GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYI  580 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC---CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEE
Confidence            44457899999987 8999987   779999987433      345678999999998899999999998888888886

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.43  E-value=0.00051  Score=49.93  Aligned_cols=63  Identities=14%  Similarity=0.040  Sum_probs=42.2

Q ss_pred             eeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-----cchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         106 VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-----DDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .||+|+||.||++..  . +..+++|.........     .....++.+|+.++..+ .|+++....-++..
T Consensus         1 ~ig~G~~~~vy~~~~--~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~   68 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--L-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVD   68 (199)
T ss_pred             CCCCCceEEEEEeec--C-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEE
Confidence            489999999999985  4 6789999854321101     11235678999999999 77765543333333

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.29  E-value=0.0017  Score=49.25  Aligned_cols=70  Identities=36%  Similarity=0.576  Sum_probs=56.2

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC-CccccceeEEeCCe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP-FLTALHSCFQTKVK  175 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp-~iv~l~~~~~~~~~  175 (178)
                      |.+...||.|+||.||++.+.    ..+++|.+.............+.+|+.++..+ .|+ +|+.+++.+.....
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~   72 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGS   72 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec----cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCE
Confidence            788899999999999999987    36899998765432222467899999999999 777 79999999866554

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.28  E-value=0.00068  Score=57.06  Aligned_cols=72  Identities=15%  Similarity=0.004  Sum_probs=47.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccc-----cccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI-----IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..|...+.||+|+||.||++.....   .+++|.......     ........+.+|+.++..+ .|++++..+.++.+.
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~---~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~  408 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGR---DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDP  408 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCc---cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeC
Confidence            3456688999999999999987633   344443221111     0112235688999999999 999988766555543


Q ss_pred             C
Q psy1646         174 V  174 (178)
Q Consensus       174 ~  174 (178)
                      +
T Consensus       409 ~  409 (535)
T PRK09605        409 E  409 (535)
T ss_pred             C
Confidence            3

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.22  E-value=0.001  Score=47.73  Aligned_cols=31  Identities=29%  Similarity=0.308  Sum_probs=27.0

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecc
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKD  136 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~  136 (178)
                      ++.||+|+||.||++.+. + +..||||+++..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~-~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-D-GEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECC-C-CCEEEEEEEecC
Confidence            468999999999999887 6 889999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.11  E-value=0.0011  Score=48.36  Aligned_cols=59  Identities=15%  Similarity=-0.045  Sum_probs=42.3

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc-------------------chhhhHHHHHHHHHHhcCCC
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD-------------------DDVDCTMTEKRILALAAKHP  161 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~-------------------~~~~~~~~Ei~il~~l~~hp  161 (178)
                      |.+.+.||.|+||.||++... + +..+|||+++.......                   .......+|..++..+ .|+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~   93 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-D-GNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEE   93 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-C-CCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHc
Confidence            777889999999999999875 6 88999998765321000                   0112356788888888 666


Q ss_pred             C
Q psy1646         162 F  162 (178)
Q Consensus       162 ~  162 (178)
                      +
T Consensus        94 ~   94 (198)
T cd05144          94 G   94 (198)
T ss_pred             C
Confidence            3

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.08  E-value=0.0014  Score=44.52  Aligned_cols=62  Identities=23%  Similarity=0.193  Sum_probs=46.9

Q ss_pred             EEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCC--CCccccceeEEeC
Q psy1646         103 FIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH--PFLTALHSCFQTK  173 (178)
Q Consensus       103 ~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~h--p~iv~l~~~~~~~  173 (178)
                      +++.||.|.++.||++...   +..+++|......   .  ...+.+|+.++..+ .+  .++++++..+...
T Consensus         2 ~~~~i~~g~~~~v~~~~~~---~~~~~iK~~~~~~---~--~~~~~~e~~~~~~l-~~~~~~~p~~~~~~~~~   65 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK---DEDYVLKINPSRE---K--GADREREVAILQLL-ARKGLPVPKVLASGESD   65 (155)
T ss_pred             cceecccccccceEEEEec---CCeEEEEecCCCC---c--hhHHHHHHHHHHHH-HHcCCCCCeEEEEcCCC
Confidence            3578999999999999975   4579999876432   1  45788999999999 55  4777777665543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=96.83  E-value=0.0028  Score=53.81  Aligned_cols=42  Identities=29%  Similarity=0.403  Sum_probs=33.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCC---CCCeEEEEeeec
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGS---SDEVYAVKVLKK  135 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~---~~~~~aiK~i~~  135 (178)
                      .....++|++.++||+|+||.||+|.+..+   .+..||+|.+..
T Consensus       127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~  171 (566)
T PLN03225        127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE  171 (566)
T ss_pred             CCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence            345678999999999999999999998632   046899998753

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.67  E-value=0.0054  Score=45.51  Aligned_cols=65  Identities=14%  Similarity=0.117  Sum_probs=44.1

Q ss_pred             EEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccc-cccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646         102 HFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI-IQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~-~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .....|++|+||+|+++..  . +..++.+.+..... ...-....+.+|+.+|..|..|++|+.++++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~-~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~   70 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--G-ERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW   70 (218)
T ss_pred             ccceeecCCCcceEEEeec--C-CceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence            3567999999999996665  4 67787766653211 0111223578999999999555778887764

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.41  E-value=0.0053  Score=51.70  Aligned_cols=37  Identities=32%  Similarity=0.509  Sum_probs=32.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecc
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKD  136 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~  136 (178)
                      +..|+. +.||+|++|+||+|..+.+ |+.||||++++.
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~-G~~VAVKV~rP~  155 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDN-GREVVVKVLRPD  155 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCC-CCEEEEEEeCcc
Confidence            456776 7999999999999999987 899999999754

>KOG1033|consensus

Probab=95.98  E-value=0.0013  Score=54.11  Aligned_cols=72  Identities=25%  Similarity=0.395  Sum_probs=60.4

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+|+.+..+|.|+||.|+.+....+ +-.+|||.|....  ......+.++|+.-+..+ .|++|+.+...|..
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d-~~~~avkritlkn--~e~s~~rvl~~~~s~a~f-eh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKAD-ENKYAVKRITLKN--REESRSRVLREVSSLAEF-EHPGIKRYFHAWYE  118 (516)
T ss_pred             hhccccccccccccCccccCCcccccc-chhhHHHHhcccc--hhhhhhhhhccccchhhh-cccchhhheeceec
Confidence            356799999999999999999998877 7789999987543  345667889999999999 99999998887764

>KOG0603|consensus

Probab=95.93  E-value=0.0011  Score=55.60  Aligned_cols=71  Identities=45%  Similarity=0.660  Sum_probs=52.9

Q ss_pred             eeccCCCeeEEEEEEe---CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         106 VLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       106 ~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.|.||.|+++...   .. +..+|+|++.+..+...... ....|..++..+..||++|.++.+|+.+..+|+
T Consensus         1 vlg~g~~gkvfLvrk~~g~da-~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l   74 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADA-GHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYL   74 (612)
T ss_pred             CCCcCCCcchHHHHHhccccc-cchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhH
Confidence            4799999999876532   23 67899999876544222222 667788888888569999999999999877664

>KOG0665|consensus

Probab=95.85  E-value=0.0073  Score=47.15  Aligned_cols=73  Identities=16%  Similarity=0.225  Sum_probs=57.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..+|.-+..+|.|.- .|--+.+... ++.||+|.+... +......++..+|..++.++ .|+||++++.+|....
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~-~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~   88 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVL-GRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQK   88 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhc-cCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCccc
Confidence            356788888998887 6777777777 889999987654 32344567889999999999 9999999999987543

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.38  E-value=0.032  Score=46.00  Aligned_cols=30  Identities=33%  Similarity=0.304  Sum_probs=26.1

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecc
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKD  136 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~  136 (178)
                      +.||.|++|+||+|..+ + |+.||||+.+..
T Consensus       123 ~plasaSigQVh~A~l~-~-G~~VaVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-D-GKEVAVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEec-C-CCEEEEEeeCCC
Confidence            57999999999999876 6 889999998654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1024|consensus

Probab=95.33  E-value=0.013  Score=47.14  Aligned_cols=74  Identities=22%  Similarity=0.222  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC--C--CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS--S--DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~--~--~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +...++.+..++-+|.||.||.|.++..  .  .+.+-+|.++...  ..-+...++.|.-++..+ .|||+....++..
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~-sH~nll~V~~V~i  357 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGA-SHPNLLSVLGVSI  357 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcC-cCCCccceeEEEe
Confidence            3456688888999999999999976632  0  1234456654332  345567899999999999 8999999887654


Q ss_pred             e
Q psy1646         172 T  172 (178)
Q Consensus       172 ~  172 (178)
                      .
T Consensus       358 e  358 (563)
T KOG1024|consen  358 E  358 (563)
T ss_pred             e
Confidence            3

>KOG1166|consensus

Probab=94.77  E-value=0.043  Score=49.15  Aligned_cols=39  Identities=38%  Similarity=0.595  Sum_probs=32.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeec
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK  135 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~  135 (178)
                      .+....|.+.+.||+|+||+||+|... . +..||+|+=..
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~-~-~~~~alK~e~P  732 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHS-N-GKLVALKVEKP  732 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecC-C-CcEEEEEeecC
Confidence            345677999999999999999999987 4 78999997654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=94.57  E-value=0.12  Score=40.19  Aligned_cols=51  Identities=22%  Similarity=0.280  Sum_probs=38.8

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHH
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK  151 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei  151 (178)
                      .+...+.||.|+|+.||.+.+..+ ++.+|+|+............+.+.+|.
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t-~~~~avkvf~~~~~~~~~~~~~~~~e~   63 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVET-GEEFAVKVFLLPADASANEYEQLKEEQ   63 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTT-TEEEEEEEEEESSTTHTTHHHHHHHHH
T ss_pred             EEEEccccccCCceEEEEEEEccC-CceEEEEEEecccccchHHHHHHHHHH
Confidence            367789999999999999999999 999999987543322334455566665

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.48  E-value=0.023  Score=38.21  Aligned_cols=45  Identities=27%  Similarity=0.207  Sum_probs=32.8

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHH
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILAL  156 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~  156 (178)
                      ...||.|+.|+||+|..+ + |+.||||+.++.      ....+..++.+|..
T Consensus        16 ~~PlasASiaQVh~a~l~-~-g~~VaVKV~rP~------i~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLK-D-GEEVAVKVQRPG------IEEQIEADLRILRR   60 (119)
T ss_pred             cchhhheehhhheeeeec-c-cchhhhhhcchH------HHHHHHHHHHHHHH
Confidence            357999999999999987 4 789999998754      23445555555543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=94.45  E-value=0.97  Score=33.41  Aligned_cols=71  Identities=24%  Similarity=0.287  Sum_probs=47.6

Q ss_pred             CCeEEEeeeccCCC-eeEEEEEEeCCCCCeEEEEeeeccccccc------------------chhhhHHHHHHHHHHhc-
Q psy1646          99 EDFHFIKVLGKGSF-GKVMLAEKRGSSDEVYAVKVLKKDVIIQD------------------DDVDCTMTEKRILALAA-  158 (178)
Q Consensus        99 ~~~~~~~~lG~G~f-g~V~~~~~~~~~~~~~aiK~i~~~~~~~~------------------~~~~~~~~Ei~il~~l~-  158 (178)
                      .+++.++.||.|.- |.||++...   |..||+|+.........                  .....|..|-....+|. 
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~---g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke  113 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID---GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE  113 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC---CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence            78999999999999 999999986   67999998332111100                  12234666766555552 


Q ss_pred             -CCCCc--cccceeEEe
Q psy1646         159 -KHPFL--TALHSCFQT  172 (178)
Q Consensus       159 -~hp~i--v~l~~~~~~  172 (178)
                       .+..+  |++|+++.-
T Consensus       114 ~~~e~~~Avkc~Gyl~L  130 (207)
T PF13095_consen  114 AGREGLWAVKCHGYLLL  130 (207)
T ss_pred             ccccCceEEEeeEEEEE
Confidence             33344  888887643

>KOG1243|consensus

Probab=94.00  E-value=0.073  Score=45.54  Aligned_cols=57  Identities=11%  Similarity=0.106  Sum_probs=44.4

Q ss_pred             EEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         117 LAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       117 ~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|..+.+ +.++.+.+...+.   ......+.+-+.-|+.+ +||||+++++.++.+..+||
T Consensus        30 ~~t~k~~-~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~yl   86 (690)
T KOG1243|consen   30 DGTRKAD-GGPVSVFVYKRSN---GEVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYL   86 (690)
T ss_pred             ccceecc-CCceEEEEEeCCC---chhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEE
Confidence            4566677 8888888876542   23345567778889999 99999999999999998885

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=93.70  E-value=0.17  Score=36.73  Aligned_cols=53  Identities=30%  Similarity=0.274  Sum_probs=40.9

Q ss_pred             EEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcc
Q psy1646         103 FIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT  164 (178)
Q Consensus       103 ~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv  164 (178)
                      ..+.|++|.+|.||+|..+   |..+|+|+-+.     +.....+..|+++|..+ ..-++.
T Consensus        26 v~~~L~KG~~s~Vyl~~~~---~~~~a~Kvrr~-----ds~r~~l~kEakiLeil-~g~~~~   78 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR---GGEVALKVRRR-----DSPRRNLEKEAKILEIL-AGEGVT   78 (201)
T ss_pred             hhhhhhcccccEEEEeecc---CceEEEEEecC-----CcchhhHHHHHHHHHHh-hhcCCC
Confidence            3578999999999999987   56899997553     34566788999999888 544443

>KOG0601|consensus

Probab=93.41  E-value=0.1  Score=43.65  Aligned_cols=82  Identities=21%  Similarity=0.245  Sum_probs=58.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...+.+|.++..||.|.|+.|+.+..+ .+ +..|++|.+..... .......-+.|+.+...+..|.+++.++..|..-
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~-~~~Y~~ke~~~~l~-~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEG-DCIYAAKELLNGLA-TFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCC-CceEeChhhhcccc-chHhhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence            345678999999999999999988866 45 78899997754432 2222334566776666666788899988887766


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      .+.||
T Consensus       339 r~~~i  343 (524)
T KOG0601|consen  339 RQGYI  343 (524)
T ss_pred             ccccC
Confidence            55543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=92.89  E-value=0.43  Score=36.00  Aligned_cols=61  Identities=13%  Similarity=0.153  Sum_probs=40.6

Q ss_pred             eeec-cCCCeeEEEEEEeCCCCCeEEEEeeecccc----c------ccchhhhHHHHHHHHHHhcCCCCc--ccccee
Q psy1646         105 KVLG-KGSFGKVMLAEKRGSSDEVYAVKVLKKDVI----I------QDDDVDCTMTEKRILALAAKHPFL--TALHSC  169 (178)
Q Consensus       105 ~~lG-~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~----~------~~~~~~~~~~Ei~il~~l~~hp~i--v~l~~~  169 (178)
                      ..|| .|+.|.||.+...   +..+++|......+    .      ......++.+|+.++..| .|++|  +..+.+
T Consensus        37 ~~lg~~~g~gtv~~v~~~---~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~  110 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP---GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAA  110 (239)
T ss_pred             ceeecCCCCccEEEEEeC---CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEee
Confidence            4677 7888888887764   56788887754221    0      112335688999999999 88775  444444

>KOG0601|consensus

Probab=92.72  E-value=0.33  Score=40.75  Aligned_cols=80  Identities=18%  Similarity=0.027  Sum_probs=60.5

Q ss_pred             CCCCeEEEeeecc--CCCeeEEEEEE--eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGK--GSFGKVMLAEK--RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~--G~fg~V~~~~~--~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ....+.....+|.  |.+|.||.+..  ... +..+|+|.-..- ........+-++|+....++..|.+.++.+..|+.
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s-~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~  189 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSES-PHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG  189 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCcccC-CcccccccccCC-CCCccccccccchhhcccccCccccccccCccccc
Confidence            3445777889999  99999999888  777 888998863211 11234455667888888888789999999999998


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       190 ~~~lfi  195 (524)
T KOG0601|consen  190 SGILFI  195 (524)
T ss_pred             CCccee
Confidence            887775

>KOG0195|consensus

Probab=92.16  E-value=0.017  Score=44.42  Aligned_cols=79  Identities=13%  Similarity=0.140  Sum_probs=58.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+......++.+|.+..-|..|+|++.++   .+..|+++.... .......|..|.-.|+-. .||||+..++.|..
T Consensus       184 ~~gid~~~lnl~tkl~e~hsgelwrgrwqgn---divakil~vr~~-t~risrdfneefp~lrif-shpnilpvlgacns  258 (448)
T KOG0195|consen  184 YTGIDVSSLNLITKLAESHSGELWRGRWQGN---DIVAKILNVREV-TARISRDFNEEFPALRIF-SHPNILPVLGACNS  258 (448)
T ss_pred             ccCcchhhhhhhhhhccCCCcccccccccCc---chhhhhhhhhhc-chhhcchhhhhCcceeee-cCCchhhhhhhccC
Confidence            4456667778888999999999999999854   566777765543 233345667777677767 99999999998887


Q ss_pred             CCeE
Q psy1646         173 KVKC  176 (178)
Q Consensus       173 ~~~~  176 (178)
                      +.++
T Consensus       259 ppnl  262 (448)
T KOG0195|consen  259 PPNL  262 (448)
T ss_pred             CCCc
Confidence            6553

>cd05151 ChoK Choline Kinase (ChoK)

Probab=91.91  E-value=0.59  Score=32.55  Aligned_cols=58  Identities=19%  Similarity=0.101  Sum_probs=39.7

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcc-cccee
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT-ALHSC  169 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv-~l~~~  169 (178)
                      ++.|+.|.++.||++...   +..+++|......    .....+..|+.++..+ .+.+++ .++..
T Consensus         3 ~~~l~~G~~~~vy~~~~~---~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l-~~~~~~P~~~~~   61 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA---NKKYVVRIPGNGT----ELLINRENEAENSKLA-AEAGIGPKLYYF   61 (170)
T ss_pred             eeecCCcccCceEEEEEC---CeEEEEEeCCCCc----ccccCHHHHHHHHHHH-HHhCCCCceEEE
Confidence            467899999999998864   5689999875431    1123467899999988 444443 44443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=90.52  E-value=0.92  Score=32.93  Aligned_cols=62  Identities=10%  Similarity=0.044  Sum_probs=43.0

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC--CccccceeEE
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP--FLTALHSCFQ  171 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp--~iv~l~~~~~  171 (178)
                      +.|+.|.++.||++... . |..+++|.......  ......+.+|..++..+ .+.  ++.+++.+..
T Consensus         4 ~~l~~G~~n~~~~v~~~-~-g~~~ilK~~~~~~~--~~~~~~~~~E~~~~~~l-~~~~~~vp~~~~~~~   67 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-G-GRRLVLRRPPPGAL--LPSAHDVAREYRVLRAL-AGTGVPVPKVLALCE   67 (223)
T ss_pred             eecCCCccceEEEEEec-C-CcceEEEeCCCccc--CcccccHHHHHHHHHHh-hCCCCCCCCEEEECC
Confidence            57899999999998864 3 47899998764421  12345789999999998 543  3455555443

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0606|consensus

Probab=89.32  E-value=0.25  Score=44.60  Aligned_cols=41  Identities=27%  Similarity=0.547  Sum_probs=34.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccc
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDV  137 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~  137 (178)
                      .....+|..+++|-.|+||.||++.++.+ .+.+|+| |++..
T Consensus        79 ~p~e~df~~IklisngAygavylvrh~~t-rqrfa~k-iNkq~  119 (1205)
T KOG0606|consen   79 APSESDFNTIKLISNGAYGAVYLVRHKET-RQRFAMK-INKQN  119 (1205)
T ss_pred             CCCccccceeEeeccCCCCceeeeecccc-ccchhhc-ccccc
Confidence            34467899999999999999999999988 8999994 55443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=87.75  E-value=0.75  Score=38.84  Aligned_cols=45  Identities=22%  Similarity=0.181  Sum_probs=34.8

Q ss_pred             eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHh
Q psy1646         105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA  157 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l  157 (178)
                      +.|+.++-|+||+|... + |+.||||+.++.      ..+.+...+.+|+.+
T Consensus       131 ~PiAsASIaQVH~A~L~-s-G~~VAVKVqrPg------i~~~i~~DL~il~~~  175 (517)
T COG0661         131 EPIASASIAQVHRAVLK-S-GEEVAVKVQRPG------IRERIEADLKLLRRL  175 (517)
T ss_pred             CchhhhhHhhheeEEec-C-CCEEEEEecCCC------hHHHHHHHHHHHHHH
Confidence            58899999999999988 4 789999998754      345566666666654

>KOG0590|consensus

Probab=82.13  E-value=0.28  Score=42.16  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=55.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..|.+.+.||+|+|+.|.+..........+|+|.+.... ........+..|..+-..+..|.|++.+++.....+..|
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            457788889999999998887754425567777665432 123444566668888877844999999998887766554

>KOG3741|consensus

Probab=81.84  E-value=2.3  Score=36.08  Aligned_cols=55  Identities=16%  Similarity=0.132  Sum_probs=41.3

Q ss_pred             eeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         113 GKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       113 g~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+-|+++...+ |..|++|.++..+   .........-++.++++ .|+|+|.+.++|.+
T Consensus       290 ~Ttyk~~s~~D-G~~YvLkRlhg~r---~~~~nk~t~lve~wkkl-~h~NvV~frevf~t  344 (655)
T KOG3741|consen  290 ITTYKATSNVD-GNAYVLKRLHGDR---DQSTNKDTSLVEAWKKL-CHTNVVPFREVFLT  344 (655)
T ss_pred             ceeEeeeeccC-Cceeeeeeecccc---ccCcccchHHHHHHHHh-ccCceeehhhhhhh
Confidence            35789999888 9999999985432   22233444557788999 99999999998874

>KOG1240|consensus

Probab=80.46  E-value=0.68  Score=42.39  Aligned_cols=65  Identities=28%  Similarity=0.356  Sum_probs=44.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccc-ccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDV-IIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .|...+.||.+.|=+|.+|.++.   ..+.+|+.-+.. ...-....+.+.|+. .... .+||.+.+.-+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e---G~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~   89 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE---GLVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKV   89 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC---ceEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHH
Confidence            68899999999999999999873   358999875432 212223344455555 3334 89998876544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-18
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-18
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		7e-18
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-17
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		6e-13
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		1e-12
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-11
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-11
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-11
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-11
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-11
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-09
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-09
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		5e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		5e-09
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		7e-09
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		7e-09
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		1e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		1e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		8e-08
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-06
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		9e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		7e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		8e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		8e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		8e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		8e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		8e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		8e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		8e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		8e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		8e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		8e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		9e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		9e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		9e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		3e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		3e-04
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-04
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		7e-04

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           ++ L DF+F+ VLGKGSFGKVML+E++G+ DE+YA                CTM EKR+L
Sbjct: 16  RMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
           AL  K PFLT LHSCFQT  +  F
Sbjct: 75  ALPGKPPFLTQLHSCFQTMDRLYF 98

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           ++ L DF+F+ VLGKGSFGKVML+E++G+ DE+YA                CTM EKR+L
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
           AL  K PFLT LHSCFQT  +  F
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYF 419

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           +V L DF+F+ VLGKGSFGKVMLA+++G+ +E+YA                CTM EKR+L
Sbjct: 15  RVKLTDFNFLMVLGKGSFGKVMLADRKGT-EELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
           AL  K PFLT LHSCFQT  +  F
Sbjct: 74  ALLDKPPFLTQLHSCFQTVDRLYF 97

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRI 153
            ++G+++F FI+VLGKGSFGKVMLA  + + D +YA                CTMTEKRI
Sbjct: 18  NRLGIDNFEFIRVLGKGSFGKVMLARVKETGD-LYAVKVLKKDVILQDDDVECTMTEKRI 76
Query: 154 LALAAKHPFLTALHSCFQTKVKCSF 178
           L+LA  HPFLT L  CFQT  +  F
Sbjct: 77  LSLARNHPFLTQLFCCFQTPDRLFF 101

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           K+ +EDF   K+LGKGSFGKV LAE +  +++ +A                CTM EKR+L
Sbjct: 14  KLKIEDFELHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
           +LA +HPFLT +   FQTK    F
Sbjct: 73  SLAWEHPFLTHMFCTFQTKENLFF 96

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           K+ +EDF   K+LGKGSFGKV LAE +  +++ +A                CTM EKR+L
Sbjct: 13  KLKIEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
           +LA +HPFLT +   FQTK    F
Sbjct: 72  SLAWEHPFLTHMFCTFQTKENLFF 95

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILA 155
           +GL+DF  ++V+G+GS+ KV+L   +  +D +YA                   TEK +  
Sbjct: 17  LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 156 LAAKHPFLTALHSCFQTKVKCSF 178
            A+ HPFL  LHSCFQT+ +  F
Sbjct: 76  QASNHPFLVGLHSCFQTESRLFF 98

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILA 155
           +GL+DF  ++V+G+GS+ KV+L   +  +D +YA                   TEK +  
Sbjct: 2   LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 156 LAAKHPFLTALHSCFQTKVKCSF 178
            A+ HPFL  LHSCFQT+ +  F
Sbjct: 61  QASNHPFLVGLHSCFQTESRLFF 83

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILA 155
           +GL+DF  ++V+G+GS+ KV+L   +  +D +YA                   TEK +  
Sbjct: 6   LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 156 LAAKHPFLTALHSCFQTKVKCSF 178
            A+ HPFL  LHSCFQT+ +  F
Sbjct: 65  QASNHPFLVGLHSCFQTESRLFF 87

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILA 155
           +GL+DF  ++V+G+GS+ KV+L   +  +D +YA                   TEK +  
Sbjct: 49  LGLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 156 LAAKHPFLTALHSCFQTKVKCSF 178
            A+ HPFL  LHSCFQT+ +  F
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFF 130

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEV-YAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           DFHF+KV+GKGSFGKV+LA  R  ++EV YA                  M+E+ +L    
Sbjct: 39  DFHFLKVIGKGSFGKVLLA--RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 159 KHPFLTALHSCFQTKVKCSF 178
           KHPFL  LH  FQT  K  F
Sbjct: 97  KHPFLVGLHFSFQTADKLYF 116

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKR 152
           D KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R
Sbjct: 4   DPKVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 153 ILALAAKHPFLTALHSCFQTKVKCSF 178
           +L    +HPFLTAL   FQT  +  F
Sbjct: 63  VLQ-NTRHPFLTALKYAFQTHDRLCF 87

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKR 152
           D +V + +F ++K+LGKG+FGKV+L +++ +    YA                 T+TE R
Sbjct: 4   DPRVTMNEFEYLKLLGKGTFGKVILVKEKATG-RYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 153 ILALAAKHPFLTALHSCFQTKVKCSF 178
           +L   ++HPFLTAL   FQT  +  F
Sbjct: 63  VLQ-NSRHPFLTALKYSFQTHDRLCF 87

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 60  Q-NTRHPFLTALKYAFQTHDRLCF 82

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 60  Q-NTRHPFLTALKYAFQTHDRLCF 82

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R+L
Sbjct: 4   KVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 63  Q-NTRHPFLTALKYAFQTHDRLCF 85

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 60  Q-NTRHPFLTALKYAFQTHDRLCF 82

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 60  Q-NTRHPFLTALKYAFQTHDRLCF 82

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA                 T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATG-RYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 60  Q-NTRHPFLTALKYAFQTHDRLCF 82

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           +V + +F ++K+LGKG+FGKV+L +++ +    YA                 T+TE R+L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATG-RYYAMKILKKEVIVAKDEVAHTLTENRVL 205
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
              ++HPFLTAL   FQT  +  F
Sbjct: 206 Q-NSRHPFLTALKYSFQTHDRLCF 228

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           +V + +F ++K+LGKG+FGKV+L +++ +    YA                 T+TE R+L
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATG-RYYAMKILKKEVIVAKDEVAHTLTENRVL 202
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
              ++HPFLTAL   FQT  +  F
Sbjct: 203 Q-NSRHPFLTALKYSFQTHDRLCF 225

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           +V + +F ++K+LGKG+FGKV+L +++ +    YA                 T+TE R+L
Sbjct: 5   RVTMNEFEYLKLLGKGTFGKVILVKEKATG-RYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
              ++HPFLTAL   FQT  +  F
Sbjct: 64  Q-NSRHPFLTALKYSFQTHDRLCF 86

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRIL 154
           +V + +F ++K+LGKG+FGKV+L +++ +    YA                 T+TE R+L
Sbjct: 4   RVTMNEFEYLKLLGKGTFGKVILVKEKATG-RYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
              ++HPFLTAL   FQT  +  F
Sbjct: 63  Q-NSRHPFLTALKYSFQTHDRLCF 85

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAX-XXXXXXXXXXXXXXXCTMTEK 151
           KVG+E+F  +KVLG G++GKV L  K    D  ++YA                  T TE+
Sbjct: 50  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 152 RILALAAKHPFLTALHSCFQTKVKCSF 178
           ++L    + PFL  LH  FQT+ K   
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHL 136

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSD--EVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           F  +KVLG+GSFGKV L +K   SD  ++YA                  M  +R + +  
Sbjct: 26  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ERDILVEV 83
Query: 159 KHPFLTALHSCFQTKVKC 176
            HPF+  LH  FQT+ K 
Sbjct: 84  NHPFIVKLHYAFQTEGKL 101

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSD--EVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           F  +KVLG+GSFGKV L +K   SD  ++YA                  M  +R + +  
Sbjct: 26  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ERDILVEV 83
Query: 159 KHPFLTALHSCFQTKVKC 176
            HPF+  LH  FQT+ K 
Sbjct: 84  NHPFIVKLHYAFQTEGKL 101

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSD--EVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           F  +KVLG+GSFGKV L +K   SD  ++YA                  M  +R + +  
Sbjct: 27  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ERDILVEV 84
Query: 159 KHPFLTALHSCFQTKVKC 176
            HPF+  LH  FQT+ K 
Sbjct: 85  NHPFIVKLHYAFQTEGKL 102

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 101 FHFIKVLGKGSFGKVMLAEK--RGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           F  +KVLG+GSFGKV L  K  R  S  +YA                  M E+ ILA   
Sbjct: 30  FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILA-DV 87
Query: 159 KHPFLTALHSCFQTKVKC 176
            HPF+  LH  FQT+ K 
Sbjct: 88  NHPFVVKLHYAFQTEGKL 105

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 35  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 92
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 93  VNFPFLVKLEFSFK 106

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 27  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 84
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 85  VNFPFLVKLEFSFK 98

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 61  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 118
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 119 VNFPFLVKLEFSFK 132

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 61  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 118
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 119 VNFPFLVKLEFSFK 132

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + S +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFLT L   F+
Sbjct: 99  VNFPFLTKLEFSFK 112

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFLT L   F+
Sbjct: 99  VNFPFLTKLEFSFK 112

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFLT L   F+
Sbjct: 99  VNFPFLTKLEFSFK 112

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           EDF F K+LG+GSF  V+LA +  +S E YA                    E+ +++   
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSRE-YAIKILEKRHIIKENKVPYVTRERDVMS-RL 94
Query: 159 KHPFLTALHSCFQTKVKCSF 178
            HPF   L+ CFQ   K  F
Sbjct: 95  DHPFFVKLYFCFQDDEKLYF 114

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 33  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 90
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 91  VNFPFLVKLEFSFK 104

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 33  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 90
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 91  VNFPFLVKLEFSFK 104

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  YA                 T+ EKRIL  A
Sbjct: 61  LDQFERIKTLGTGSFGRVMLVKHKETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 118
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 119 VNFPFLVKLEFSFK 132

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 26  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 83
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 84  VNFPFLVKLEFSFK 97

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 98
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 99  VNFPFLVKLEFSFK 112

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKEIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKEIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  +A                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHKETGNH-FAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEYSFK 111

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  +A                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHKETGNH-FAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEYSFK 111

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK LG GSFG+VML + + + +  +A                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTLGTGSFGRVMLVKHKETGNH-FAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEYSFK 111

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK +G GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTIGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK +G GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTIGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALA 157
           L+ F  IK +G GSFG+VML +   + +  YA                 T+ EKRIL  A
Sbjct: 40  LDQFERIKTIGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRILQ-A 97
Query: 158 AKHPFLTALHSCFQ 171
              PFL  L   F+
Sbjct: 98  VNFPFLVKLEFSFK 111

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           EDF  IKV+G+G+FG+V +  K  +++ +YA                C   E+ +L +  
Sbjct: 74  EDFEIIKVIGRGAFGEVAVV-KMKNTERIYAMKILNKWEMLKRAETACFREERDVL-VNG 131
Query: 159 KHPFLTALHSCFQ 171
              ++TALH  FQ
Sbjct: 132 DCQWITALHYAFQ 144

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAXXXXXXXXXXXXXXXXCTMTEKRILALAA 158
           EDF  IKV+G+G+FG+V +  K  +++ +YA                C   E+ +L +  
Sbjct: 90  EDFEIIKVIGRGAFGEVAVV-KMKNTERIYAMKILNKWEMLKRAETACFREERDVL-VNG 147
Query: 159 KHPFLTALHSCFQ 171
              ++TALH  FQ
Sbjct: 148 DCQWITALHYAFQ 160

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-49
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	5e-49
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-49
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-48
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-48
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-48
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-46
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-44
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-42
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-42
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-42
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-41
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-39
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-39
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-38
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-36
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-36
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-35
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-35
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-34
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-34
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-33
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-19
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	9e-19
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-18
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-14
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-12
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-11
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-10
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-10
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-10
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	9e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-09
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-09
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-09
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	8e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-07
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-07
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	6e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	7e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	9e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-04
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-04

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  162 bits (412), Expect = 2e-49
 Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 66  PRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD 125
           P+ P    A P    +           +      DFHF+KV+GKGSFGKV+LA  +   +
Sbjct: 5   PQEPELMNANPAPPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAE-E 63

Query: 126 EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
             YAVKVL+K  I++  +    M+E+ +L    KHPFL  LH  FQT  K
Sbjct: 64  VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  160 bits (408), Expect = 5e-49
 Identities = 59/96 (61%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 80  TSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII 139
           T+   S   ++G   ++ L DF+F+ VLGKGSFGKVML+E++G+ DE+YAVK+LKKDV+I
Sbjct: 1   TTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVI 59

Query: 140 QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
           QDDDV+CTM EKR+LAL  K PFLT LHSCFQT  +
Sbjct: 60  QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  160 bits (407), Expect = 7e-49
 Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 1/85 (1%)

Query: 91  GGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTE 150
           G    +GL+DF  ++V+G+GS+ KV+L   + + D +YA+KV+KK+++  D+D+D   TE
Sbjct: 1   GAMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTE 59

Query: 151 KRILALAAKHPFLTALHSCFQTKVK 175
           K +   A+ HPFL  LHSCFQT+ +
Sbjct: 60  KHVFEQASNHPFLVGLHSCFQTESR 84

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  160 bits (408), Expect = 1e-48
 Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 61  TPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEK 120
            P T     +        +     + R S      +GL+DF  ++V+G+GS+ KV+L   
Sbjct: 14  IPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRL 73

Query: 121 RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
           + + D +YA++V+KK+++  D+D+D   TEK +   A+ HPFL  LHSCFQT+ +
Sbjct: 74  KKT-DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  158 bits (403), Expect = 3e-48
 Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 1/97 (1%)

Query: 79  KTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI 138
           K S             ++G+++F FI+VLGKGSFGKVMLA  + +  ++YAVKVLKKDVI
Sbjct: 3   KESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKET-GDLYAVKVLKKDVI 61

Query: 139 IQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
           +QDDDV+CTMTEKRIL+LA  HPFLT L  CFQT  +
Sbjct: 62  LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  158 bits (402), Expect = 4e-48
 Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 90  SGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMT 149
                K+ +EDF   K+LGKGSFGKV LAE + + ++ +A+K LKKDV++ DDDV+CTM 
Sbjct: 8   PSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDDDVECTMV 66

Query: 150 EKRILALAAKHPFLTALHSCFQTKVK 175
           EKR+L+LA +HPFLT +   FQTK  
Sbjct: 67  EKRVLSLAWEHPFLTHMFCTFQTKEN 92

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  160 bits (406), Expect = 1e-46
 Identities = 65/155 (41%), Positives = 90/155 (58%), Gaps = 1/155 (0%)

Query: 24  DIKKSATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGG 83
           +++K+  +G                     ++G              +    P  KT+  
Sbjct: 266 ELQKAGVDGWFKLLSQEEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANT 325

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
            S   ++G   ++ L DF+F+ VLGKGSFGKVML+E++G+ DE+YAVK+LKKDV+IQDDD
Sbjct: 326 ISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDD 384

Query: 144 VDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF 178
           V+CTM EKR+LAL  K PFLT LHSCFQT  +  F
Sbjct: 385 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  149 bits (378), Expect = 1e-44
 Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 2/81 (2%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ +    YA+K+L+K+VII  D+V  T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKAT-GRYYAMKILRKEVIIAKDEVAHTVTESRVL 59

Query: 155 ALAAKHPFLTALHSCFQTKVK 175
               +HPFLTAL   FQT  +
Sbjct: 60  Q-NTRHPFLTALKYAFQTHDR 79

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  144 bits (365), Expect = 1e-42
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 89  SSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQ-DDDVD 145
            +G   KVG+E+F  +KVLG G++GKV L  K    D  ++YA+KVLKK  I+Q     +
Sbjct: 44  LTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 103

Query: 146 CTMTEKRILALAAKHPFLTALHSCFQTKVK 175
            T TE+++L    + PFL  LH  FQT+ K
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETK 133

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  143 bits (362), Expect = 2e-42
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 83  GGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRG--SSDEVYAVKVLKKDVIIQ 140
           G S    + G  K+  E F  ++VLGKG +GKV    K    ++ +++A+KVLKK +I++
Sbjct: 1   GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR 60

Query: 141 D-DDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
           +  D   T  E+ IL    KHPF+  L   FQT  K
Sbjct: 61  NAKDTAHTKAERNILE-EVKHPFIVDLIYAFQTGGK 95

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  145 bits (367), Expect = 3e-42
 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 46  KKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIK 105
           ++E+ ++I   A              R+  P   +         +    +V + +F ++K
Sbjct: 96  REEWTTAIQTVADGLKKQAAAEMD-FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLK 154

Query: 106 VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTA 165
           +LGKG+FGKV+L +++  +   YA+K+LKK+VI+  D+V  T+TE R+L   ++HPFLTA
Sbjct: 155 LLGKGTFGKVILVKEKA-TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ-NSRHPFLTA 212

Query: 166 LHSCFQTKVK 175
           L   FQT  +
Sbjct: 213 LKYSFQTHDR 222

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  139 bits (354), Expect = 3e-41
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDDDVDCTMT 149
           G  K     F  +KVLG+GSFGKV L +K   SD  ++YA+KVLKK  +   D V  T  
Sbjct: 17  GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75

Query: 150 EKRILALAAKHPFLTALHSCFQTKVK 175
           E+ IL     HPF+  LH  FQT+ K
Sbjct: 76  ERDILV-EVNHPFIVKLHYAFQTEGK 100

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  139 bits (352), Expect = 2e-39
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           + +G + F   +VLG+G FG+V   + + +  ++YA K L K  + +       M EK+I
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKAT-GKLYACKKLNKKRLKKRKGYQGAMVEKKI 238

Query: 154 LALAAKHPFLTALHSCFQTKVKCSF 178
           LA      F+ +L   F+TK     
Sbjct: 239 LAK-VHSRFIVSLAYAFETKTDLCL 262

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  134 bits (340), Expect = 4e-39
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           K  L+DF  ++ LG GSFG+V L   R +    YA+KVLKK+++++   V+ T  E+ +L
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIVVRLKQVEHTNDERLML 60

Query: 155 ALAAKHPFLTALHSCFQTKVK 175
           +    HPF+  +   FQ   +
Sbjct: 61  S-IVTHPFIIRMWGTFQDAQQ 80

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  136 bits (345), Expect = 2e-38
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           + V    F   +VLGKG FG+V   + R +  ++YA K L+K  I +       + EK+I
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRAT-GKMYACKKLEKKRIKKRKGEAMALNEKQI 237

Query: 154 LALAAKHPFLTALHSCFQTKVK 175
           L       F+ +L   ++TK  
Sbjct: 238 LEK-VNSRFVVSLAYAYETKDA 258

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  129 bits (327), Expect = 1e-36
 Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
           + ++  +DF  +KV+G+G+F +V + + +  + +VYA+K++ K  +++  +V C   E+ 
Sbjct: 55  EVRLQRDDFEILKVIGRGAFSEVAVVKMKQ-TGQVYAMKIMNKWDMLKRGEVSCFREERD 113

Query: 153 ILALAAKHPFLTALHSCFQTKVK 175
           +L       ++T LH  FQ +  
Sbjct: 114 VLV-NGDRRWITQLHFAFQDENY 135

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  128 bits (324), Expect = 3e-36
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
            +  V  + F  ++ +GKGSFGKV + +K   + ++YA+K + K   ++ ++V     E 
Sbjct: 8   ENEDVNFDHFEILRAIGKGSFGKVCIVQKND-TKKMYAMKYMNKQKCVERNEVRNVFKEL 66

Query: 152 RILALAAKHPFLTALHSCFQTKVKCSF 178
           +I+    +HPFL  L   FQ +     
Sbjct: 67  QIMQ-GLEHPFLVNLWYSFQDEEDMFM 92

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  127 bits (322), Expect = 1e-35
 Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
             ++  EDF  +KV+G+G+FG+V + + +  +D+V+A+K+L K  +++  +  C   E+ 
Sbjct: 68  QMRLHREDFEILKVIGRGAFGEVAVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERD 126

Query: 153 ILALAAKHPFLTALHSCFQTKVK 175
           +L       ++T LH  FQ    
Sbjct: 127 VLV-NGDSKWITTLHYAFQDDNN 148

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  124 bits (313), Expect = 3e-35
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           RK   EDF F K+LG+GSF  V+LA +  +S   YA+K+L+K  II+++ V     E+ +
Sbjct: 25  RKKRPEDFKFGKILGEGSFSTVVLARELATS-REYAIKILEKRHIIKENKVPYVTRERDV 83

Query: 154 LALAAKHPFLTALHSCFQTKVK 175
           ++    HPF   L+  FQ   K
Sbjct: 84  MS-RLDHPFFVKLYFTFQDDEK 104

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  127 bits (320), Expect = 1e-34
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
            +  + + DF   +++G+G FG+V    K  +  ++YA+K L K  I         + E+
Sbjct: 182 LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKKRIKMKQGETLALNER 240

Query: 152 RILAL--AAKHPFLTALHSCFQTKVK 175
            +L+L      PF+  +   F T  K
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDK 266

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  123 bits (311), Expect = 3e-34
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
           D ++  ED+  +KV+G+G+FG+V L   +  + +VYA+K+L K  +I+  D      E+ 
Sbjct: 63  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKS-TRKVYAMKLLSKFEMIKRSDSAFFWEERD 121

Query: 153 ILALAAKHPFLTALHSCFQTKVK 175
           I+A  A  P++  L   FQ    
Sbjct: 122 IMA-FANSPWVVQLFYAFQDDRY 143

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  120 bits (304), Expect = 1e-33
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
               L+ F  IK LG GSFG+VML + +  S   YA+K+L K  +++   ++ T+ EKRI
Sbjct: 36  NTAQLDQFDRIKTLGTGSFGRVMLVKHKE-SGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94

Query: 154 LALAAKHPFLTALHSCFQTKVK 175
           L  A   PFL  L   F+    
Sbjct: 95  LQ-AVNFPFLVKLEFSFKDNSN 115

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 80.7 bits (200), Expect = 6e-19
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           RK  ++DF   + LGKG FG V LA ++  +  + A+KVL K  + ++        E  I
Sbjct: 9   RKFTIDDFDIGRPLGKGKFGNVYLAREK-QNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67

Query: 154 LALAAKHPFLTALHSCFQTKVK 175
            +   +HP +  +++ F  + +
Sbjct: 68  QSH-LRHPNILRMYNYFHDRKR 88

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 80.4 bits (199), Expect = 9e-19
 Identities = 22/118 (18%), Positives = 35/118 (29%), Gaps = 6/118 (5%)

Query: 60  ATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGD----RKVGLEDFHFIKVLGKGSFGKV 115
            T     +S  +   R  +          S G D         + F  +  LG GS+G+V
Sbjct: 14  GTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEV 73

Query: 116 MLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
                +     +YAVK           D    + E        +HP    L   ++  
Sbjct: 74  FKVRSK-EDGRLYAVKRSMSP-FRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG 129

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 78.4 bits (194), Expect = 4e-18
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           R+  LEDF   + LGKG FG V LA ++  S  + A+KVL K  + +         E  I
Sbjct: 4   RQWALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEI 62

Query: 154 LALAAKHPFLTALHSCFQTKVK 175
            +   +HP +  L+  F    +
Sbjct: 63  QSH-LRHPNILRLYGYFHDATR 83

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 68.5 bits (167), Expect = 3e-14
 Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTM 148
           + ++G +  +   +LG+G+F +V  A +   +D    + + +KV K        +     
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---EFYIGT 115

Query: 149 TEKRILALAAKHPFLTALHSCFQTKVKC 176
                L   +        +S    +   
Sbjct: 116 QLMERL-KPSMQHMFMKFYSAHLFQNGS 142

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 18/97 (18%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMT--- 149
           ++   + D+  I+ L +G F K++L EK     + YA+K  +K ++ +  D   +     
Sbjct: 25  EKDKYINDYRIIRTLNQGKFNKIILCEKDN---KFYALKKYEKSLLEKKRDFTKSNNDKI 81

Query: 150 -----------EKRILALAAKHPFLTALHSCFQTKVK 175
                      E +I+    K+ +            +
Sbjct: 82  SIKSKYDDFKNELQIITD-IKNEYCLTCEGIITNYDE 117

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
             DF  I VLG+G+FG+V+ A         YA+K ++      ++ +   ++E  +LA  
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHT----EEKLSTILSEVMLLAS- 58

Query: 158 AKHPFLTALHSCFQ 171
             H ++   ++ + 
Sbjct: 59  LNHQYVVRYYAAWL 72

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 62.3 bits (152), Expect = 4e-12
 Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 2/116 (1%)

Query: 60  ATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAE 119
             P    ++     A P    +   +               +   + LGKG F K     
Sbjct: 2   PAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEIS 61

Query: 120 KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
               + EV+A K++ K ++++    +    E  I      H  +   H  F+    
Sbjct: 62  DA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS-LAHQHVVGFHGFFEDNDF 115

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 73  AARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKV 132
           ++  +   S G       G    +  + + FI+ LG+G F  V L  +       YA+K 
Sbjct: 3   SSHHHHHHSSGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLV-EGLHDGHFYALKR 61

Query: 133 LKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
           +      +  D +    E  +  L   HP +  L +    +
Sbjct: 62  ILCH---EQQDREEAQREADMHRL-FNHPNILRLVAYCLRE 98

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 59.7 bits (144), Expect = 3e-11
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
           G GR  S   +  G   +   + LG G FG V+    + + ++V A+K  ++++     +
Sbjct: 1   GGGRSPSLPTQTCG--PWEMKERLGTGGFGYVLRWIHQDTGEQV-AIKQCRQELS--PKN 55

Query: 144 VDCTMTEKRILALAAKHPFLTALHSCFQTK 173
            +    E +I+     HP + +        
Sbjct: 56  RERWCLEIQIMKK-LNHPNVVSAREVPDGL 84

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 59.1 bits (143), Expect = 6e-11
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
           G +      +    +LG+G+   V     +  + +++A+KV      ++  DV   M E 
Sbjct: 2   GSQSTSNHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDV--QMREF 58

Query: 152 RILALAAKHPFLTALHSCFQTK 173
            +L     H  +  L +  +  
Sbjct: 59  EVLKK-LNHKNIVKLFAIEEET 79

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 58.2 bits (141), Expect = 9e-11
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +E +  ++ +G+GSFGK +L  K       Y +K +    +   +  +    E  +LA  
Sbjct: 23  MEKYVRLQKIGEGSFGKAILV-KSTEDGRQYVIKEINISRMSSKEREES-RREVAVLA-N 79

Query: 158 AKHPFLTALHSCFQTK 173
            KHP +      F+  
Sbjct: 80  MKHPNIVQYRESFEEN 95

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
           G +      +    +LG+G+   V     +  + +++A+KV      ++  DV   M E 
Sbjct: 2   GSQSTSNHLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDV--QMREF 58

Query: 152 RILALAAKHPFLTALHSCFQTK 173
            +L     H  +  L +  +  
Sbjct: 59  EVLKK-LNHKNIVKLFAIEEET 79

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
            ED+  +  +G GS+G+     ++ S  ++   K L    + + +     ++E  +L   
Sbjct: 5   AEDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAEKQML-VSEVNLLR-E 61

Query: 158 AKHPFLTALHSCFQTKVKCSF 178
            KHP +   +     +   + 
Sbjct: 62  LKHPNIVRYYDRIIDRTNTTL 82

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
             +FH ++ +G G FG V    KR     +YA+K  KK +    D+ +  + E    A+ 
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKR-LDGCIYAIKRSKKPLAGSVDEQNA-LREVYAHAVL 67

Query: 158 AKHPFLTALHSCFQ 171
            +H  +    S + 
Sbjct: 68  GQHSHVVRYFSAWA 81

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 23/167 (13%), Positives = 54/167 (32%), Gaps = 7/167 (4%)

Query: 13  KSDGLEEEWDDDIKKSATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRER 72
            S G++ +++ + +++  E +      R  RR     +      + +        +  + 
Sbjct: 7   HSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQP 66

Query: 73  AARPYTKTSGGGSGRGSSGGDRKVGLED-FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVK 131
                      G                 +    V+G+G    V     R ++   +AVK
Sbjct: 67  KGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHR-ATGHEFAVK 125

Query: 132 VLKKD-----VIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
           +++           ++  + T  E  IL   A HP +  L   +++ 
Sbjct: 126 IMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L DF  I+ LG+G FG V  A K    D  YA+K ++     ++   +  M E + LA  
Sbjct: 4   LTDFEPIQCLGRGGFGVVFEA-KNKVDDCNYAIKRIRLPN--RELAREKVMREVKALA-K 59

Query: 158 AKHPFLTALHSCFQTK 173
            +HP +    + +  K
Sbjct: 60  LEHPGIVRYFNAWLEK 75

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 89  SSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTM 148
           S        +EDF    +LGKGSF  V  AE    +    A+K++ K  + +   V    
Sbjct: 1   SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAMYKAGMVQRVQ 59

Query: 149 TEKRILALAAKHPFLTALHSCFQTKVK 175
            E +I     KHP +  L++ F+    
Sbjct: 60  NEVKIHCQ-LKHPSILELYNYFEDSNY 85

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 14/112 (12%)

Query: 62  PCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKR 121
               P  P+ +  +      G  +            L +F   K +G+G F +V  A   
Sbjct: 7   GMQGPPVPQFQPQKALRPDMGYNT------------LANFRIEKKIGRGQFSEVYRA-AC 53

Query: 122 GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
                  A+K ++   ++        + E  +L     HP +   ++ F   
Sbjct: 54  LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK-QLNHPNVIKYYASFIED 104

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
              +   + LGKG F K         + EV+A K++ K ++++    +    E  I    
Sbjct: 14  RRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS- 71

Query: 158 AKHPFLTALHSCFQTKVK 175
             H  +   H  F+    
Sbjct: 72  LAHQHVVGFHGFFEDNDF 89

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.0 bits (135), Expect = 6e-10
 Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD--DVDCTMTEKRILAL 156
           + +H    +G+GS+G V +A +   +  + A+K++ K+ I Q +  DV+   TE R++  
Sbjct: 26  KKYHLKGAIGQGSYGVVRVAIEN-QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK- 83

Query: 157 AAKHPFLTALHSCFQTKVK 175
              HP +  L+  ++ +  
Sbjct: 84  KLHHPNIARLYEVYEDEQY 102

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +   +VLGKGSFG+V+L + +  + +  AVKV+ K  + Q  D +  + E ++L    
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLK-QL 83

Query: 159 KHPFLTALHSCFQTK 173
            HP +  L+  F+ K
Sbjct: 84  DHPNIMKLYEFFEDK 98

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 90  SGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMT 149
           S  D +V +  +     LG G+FGKV + E + +  +V AVK+L +  I   D V     
Sbjct: 2   SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKV-AVKILNRQKIRSLDVVGKIKR 60

Query: 150 EKRILALAAKHPFLTALHSCFQTKVK 175
           E + L L  +HP +  L+    T   
Sbjct: 61  EIQNLKL-FRHPHIIKLYQVISTPTD 85

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 83  GGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
           G S    +     +G  ++  +K +GKG+F KV LA    +  EV A+K++ K   +   
Sbjct: 1   GNSIASCADEQPHIG--NYRLLKTIGKGNFAKVKLARHILTGREV-AIKIIDKTQ-LNPT 56

Query: 143 DVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
            +     E RI+ +   HP +  L    +T+  
Sbjct: 57  SLQKLFREVRIMKI-LNHPNIVKLFEVIETEKT 88

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
                          + +  +  LG G+FG V  A  +  + EV  VK +KK+ +++D  
Sbjct: 9   AVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEV-VVKFIKKEKVLEDCW 67

Query: 144 VDCTMTEK-----RILALAAKHPFLTALHSCFQTKVK 175
           ++     K      IL+   +H  +  +   F+ +  
Sbjct: 68  IEDPKLGKVTLEIAILSR-VEHANIIKVLDIFENQGF 103

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
             DF  I+++G G FG+V  A K     + Y +K +K +    ++       E + LA  
Sbjct: 10  GMDFKEIELIGSGGFGQVFKA-KHRIDGKTYVIKRVKYN----NEKA---EREVKALA-K 60

Query: 158 AKHPFLTALHSCFQ 171
             H  +   + C+ 
Sbjct: 61  LDHVNIVHYNGCWD 74

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 53.7 bits (130), Expect = 3e-09
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + F F++VLG G+F +V L ++R  + +++A+K +KK    +D  +     E  +L    
Sbjct: 9   KTFIFMEVLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPAFRDSSL---ENEIAVL-KKI 63

Query: 159 KHPFLTALHSCFQTKVK 175
           KH  +  L   +++   
Sbjct: 64  KHENIVTLEDIYESTTH 80

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 53.6 bits (129), Expect = 4e-09
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
           G        D +V +  +     LG G+FGKV + +   +  +V AVK+L +  I   D 
Sbjct: 1   GPMAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKV-AVKILNRQKIRSLDV 59

Query: 144 VDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
           V     E + L L  +HP +  L+    T   
Sbjct: 60  VGKIRREIQNLKL-FRHPHIIKLYQVISTPSD 90

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 53.2 bits (128), Expect = 6e-09
 Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 59  SATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDR------KVGLEDFHFI--KVLGKG 110
              P   P+ P      P  +       +      +      K  + D + +  +VLG G
Sbjct: 14  FPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLG 73

Query: 111 SFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF 170
             GKV+    +  + E +A+K+L         D      E  +   A++ P +  +   +
Sbjct: 74  INGKVLQIFNK-RTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIVDVY 124

Query: 171 QTKV 174
           +   
Sbjct: 125 ENLY 128

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 52.9 bits (127), Expect = 7e-09
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 4/130 (3%)

Query: 45  HKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFI 104
           H   + S +             +  R+    P   T        S+     V    +  +
Sbjct: 2   HHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSIL 61

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL-ALAAKHPFL 163
           K +G G   KV          ++YA+K +  +    +  +D    E   L  L      +
Sbjct: 62  KQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKI 118

Query: 164 TALHSCFQTK 173
             L+    T 
Sbjct: 119 IRLYDYEITD 128

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 53.1 bits (127), Expect = 7e-09
 Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 5/122 (4%)

Query: 57  ARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFI--KVLGKGSFGK 114
            R         S   ++A     ++   +       + ++G      +   VLG+     
Sbjct: 29  NRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYA 88

Query: 115 VMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILAL--AAKHPFLTALHSCFQT 172
            + A  +  + E + V V         + +     E   L L    K+     +H  F  
Sbjct: 89  YLEATDQ-ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147

Query: 173 KV 174
             
Sbjct: 148 PF 149

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 52.7 bits (127), Expect = 8e-09
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           R +G   +   + LG+GSFGKV LA    +  +V A+K + + ++ + D       E   
Sbjct: 6   RHIG--PYIIRETLGEGSFGKVKLATHYKTQQKV-ALKFISRQLLKKSDMHMRVEREISY 62

Query: 154 LALAAKHPFLTALHSCFQTKVK 175
           L L  +HP +  L+    T   
Sbjct: 63  LKL-LRHPHIIKLYDVITTPTD 83

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 52.7 bits (127), Expect = 8e-09
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 45  HKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFI 104
           H   + SS            +  S    AA             GS+        + F   
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALS---DFFEVE 58

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
             LG+G+   V   +++  + + YA+KVLKK V     D     TE  +L L   HP + 
Sbjct: 59  SELGRGATSIVYRCKQK-GTQKPYALKVLKKTV-----DKKIVRTEIGVL-LRLSHPNII 111

Query: 165 ALHSCFQTKVK 175
            L   F+T  +
Sbjct: 112 KLKEIFETPTE 122

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.5 bits (126), Expect = 8e-09
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 9/102 (8%)

Query: 78  TKTSGGGSGRGSS---GGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVK-VL 133
             + GG SGR  S   G   ++G       +VL +G F  V  A+  GS    YA+K +L
Sbjct: 4   PGSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSG-REYALKRLL 62

Query: 134 KKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
             +    ++     + E   +   + HP +    S      +
Sbjct: 63  SNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 100

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L DF  I+ +G+G FG V  A+ +   D  YA+K ++     ++   +  M E + LA  
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNK-VDDCNYAIKRIRLPN--RELAREKVMREVKALA-K 60

Query: 158 AKHPFLTALHSCFQTKVKCSF 178
            +HP +    + +       +
Sbjct: 61  LEHPGIVRYFNAWLETPPEKW 81

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 79  KTSGGGSGRGSSGGDRKVGLEDFHFI--KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKD 136
            +SG   G  +          +F+ +  K LG+G F  V     + S+ + YA K LKK 
Sbjct: 7   HSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISK-STGQEYAAKFLKKR 65

Query: 137 VIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
              Q D     + E  +L LA   P +  LH  ++  
Sbjct: 66  RRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVYENT 101

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 8/124 (6%)

Query: 56  GARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKV 115
            +      ++   PR     P    +   + + + G +++     +    +LG G FG V
Sbjct: 3   SSHHHHHHSSGLVPRGSHMAP---CNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSV 59

Query: 116 MLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR---ILALAA-KHPFLTALHSCFQ 171
               +   +  V A+K ++KD I    ++           +L   +     +  L   F+
Sbjct: 60  YSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118

Query: 172 TKVK 175
               
Sbjct: 119 RPDS 122

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E ++ + +LGKGSFG+V+  + R  + + YAVKV+ K       D    + E  +L    
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKN-KDTSTILREVELL-KKL 78

Query: 159 KHPFLTALHSCFQTK 173
            HP +  L    +  
Sbjct: 79  DHPNIMKLFEILEDS 93

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 10/159 (6%)

Query: 18  EEEWDDDIKKSATEGKQTQRDTRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPY 77
                 D+       +  +       R        +   A        P   +  +A   
Sbjct: 7   HHSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTER--MPVKSKRTSALAV 64

Query: 78  TKTSGGGSGRGSSGGDRKVGLEDFHFI---KVLGKGSFGKVMLAEKRGSSDEVYAVKVLK 134
              +            ++  +  F+ +   ++LG G FG+V   E+  ++    A K++K
Sbjct: 65  DIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEET-ATGLKLAAKIIK 123

Query: 135 KDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
              +   ++V     E  ++     H  L  L+  F++K
Sbjct: 124 TRGMKDKEEV---KNEISVMNQ-LDHANLIQLYDAFESK 158

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 85  SGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDV 144
           SGR +      +  + F F + LG G+FG V L E+R SS     +K + KD       +
Sbjct: 9   SGRENLYFQGTID-DLFIFKRKLGSGAFGDVHLVEER-SSGLERVIKTINKDRS--QVPM 64

Query: 145 DCTMTEKRILALAAKHPFLTALHSCFQTK 173
           +    E  +L  +  HP +  +   F+  
Sbjct: 65  EQIEAEIEVL-KSLDHPNIIKIFEVFEDY 92

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 57  ARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVM 116
           +    P   P +P      P              G DR+    ++    +LGKG FG V 
Sbjct: 1   SMLTKPLQGPPAPPGTPTPP------------PGGKDREAFEAEYRLGPLLGKGGFGTVF 48

Query: 117 LAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR------ILALAAKHPFLTALHSCF 170
              +     +V A+KV+ ++ ++    +  ++T          +     HP +  L   F
Sbjct: 49  AGHRLTDRLQV-AIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107

Query: 171 QTKVK 175
           +T+  
Sbjct: 108 ETQEG 112

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 50.9 bits (122), Expect = 4e-08
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E +  +K LG G++G+V+L   +  +    A+K+++K  +    +    + E  +L    
Sbjct: 37  EMYQRVKKLGSGAYGEVLLCRDK-VTHVERAIKIIRKTSVSTSSNSKL-LEEVAVL-KLL 93

Query: 159 KHPFLTALHSCFQTK 173
            HP +  L+  F+ K
Sbjct: 94  DHPNIMKLYDFFEDK 108

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E ++ + +LGKGSFG+V+  + R  + + YAVKV+ K       D    + E  +L    
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKN-KDTSTILREVELL-KKL 78

Query: 159 KHPFLTALHSCFQTK 173
            HP +  L    +  
Sbjct: 79  DHPNIMKLFEILEDS 93

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 5/98 (5%)

Query: 78  TKTSGGGSGRGSSGGDRKVG--LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK 135
           + T G   GRGS           +++   + LGKG+F  V     + ++   +A K++  
Sbjct: 6   SMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINT 64

Query: 136 DVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
              +   D      E RI     +HP +  LH   Q +
Sbjct: 65  KK-LSARDFQKLEREARICRK-LQHPNIVRLHDSIQEE 100

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 7/80 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK-----RI 153
           +++   K LG G+ G+V LA +R  + +  A++++ K         +            I
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFER-KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 154 LALAAKHPFLTALHSCFQTK 173
           L     HP +  + + F  +
Sbjct: 194 L-KKLNHPCIIKIKNFFDAE 212

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 49.6 bits (119), Expect = 8e-08
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           +VLG G  GKV+    +  + E +A+K+L         D      E  +   A++ P + 
Sbjct: 24  QVLGLGINGKVLQIFNK-RTQEKFALKML--------QDCPKARREVELHWRASQCPHIV 74

Query: 165 ALHSCFQT 172
            +   ++ 
Sbjct: 75  RIVDVYEN 82

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 8/82 (9%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
               VG   F    VLG G+ G ++        +   AVK +        +       E 
Sbjct: 17  SVVIVGKISFCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILP------ECFSFADREV 68

Query: 152 RILALAAKHPFLTALHSCFQTK 173
           ++L  + +HP +       + +
Sbjct: 69  QLLRESDEHPNVIRYFCTEKDR 90

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 81  SGGGSGRGSSGGDRKVGLED-FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII 139
             GG G      D  V  ED +   +V+GKG F  V     R  + + +AVK++      
Sbjct: 5   ISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINR-ETGQQFAVKIVDVAKFT 63

Query: 140 QDD--DVDCTMTEKRILALAAKHPFLTALHSCFQTK 173
                  +    E  I     KHP +  L   + + 
Sbjct: 64  SSPGLSTEDLKREASICH-MLKHPHIVELLETYSSD 98

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
            VLG+G+  +V       +S E YAVK+++K        V     E  +L     H  + 
Sbjct: 19  DVLGEGAHARVQTCINLITSQE-YAVKIIEKQPGHIRSRV---FREVEMLYQCQGHRNVL 74

Query: 165 ALHSCFQTK 173
            L   F+ +
Sbjct: 75  ELIEFFEEE 83

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
            V    +  +K +G G   KV          ++YA+K +  +    +  +D    E   L
Sbjct: 24  SVKGRIYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYL 80

Query: 155 -ALAAKHPFLTALHSCFQTK 173
             L      +  L+    T 
Sbjct: 81  NKLQQHSDKIIRLYDYEITD 100

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 88  GSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCT 147
           GS+ GD     + +     +G+GS+G+V +A ++  +    A K + K  +   D     
Sbjct: 1   GSTKGDIN---QYYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRF--- 53

Query: 148 MTEKRILALAAKHPFLTALHSCFQTK 173
             E  I+  +  HP +  L+  F+  
Sbjct: 54  KQEIEIM-KSLDHPNIIRLYETFEDN 78

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
            V    +  +K +G G   KV          ++YA+K +  +    +  +D    E   L
Sbjct: 5   SVKGRIYSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYL 61

Query: 155 A-LAAKHPFLTALHSCFQTK 173
             L      +  L+    T 
Sbjct: 62  NKLQQHSDKIIRLYDYEITD 81

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E++   + LGKG+F  V    K   + + YA  ++     +   D      E RI  L  
Sbjct: 11  EEYQLFEELGKGAFSVVRRCVKV-LAGQEYAAMIINTK-KLSARDHQKLEREARICRL-L 67

Query: 159 KHPFLTALHSCFQTK 173
           KHP +  LH     +
Sbjct: 68  KHPNIVRLHDSISEE 82

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +++   + LGKG+F  V     + ++   +A K++    +    D      E RI     
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSA-RDFQKLEREARICRK-L 62

Query: 159 KHPFLTALHSCFQTK 173
           +HP +  LH   Q +
Sbjct: 63  QHPNIVRLHDSIQEE 77

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 5/119 (4%)

Query: 58  RSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFI--KVLGKGSFGKV 115
           R         S   ++A     ++   +       + ++G      +   VLG+      
Sbjct: 35  RIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAY 94

Query: 116 MLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILAL--AAKHPFLTALHSCFQT 172
           + A  +  + E + V V         + +     E   L L    K+     +H  F  
Sbjct: 95  LEATDQ-ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 7/80 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK-----RI 153
           +++   K LG G+ G+V LA +R  + +  A+K++ K         +            I
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFER-KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 154 LALAAKHPFLTALHSCFQTK 173
           L     HP +  + + F  +
Sbjct: 69  LKK-LNHPCIIKIKNFFDAE 87

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 14/115 (12%), Positives = 24/115 (20%), Gaps = 7/115 (6%)

Query: 52  SINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKV------GLEDFHFIK 105
           S  +               E    P        +       +  V      G      ++
Sbjct: 9   SFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVE 68

Query: 106 VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
            L  G    V L        E +A+KV          +++         A     
Sbjct: 69  PLRVGDRSVVFLVRDV-ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK------DVIIQDDDVDCTMTEKR 152
           E++   ++LG+G    V     +  + + YAVK++              +  + T+ E  
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 153 ILALAAKHPFLTALHSCFQTK 173
           IL   + HP +  L   ++T 
Sbjct: 76  ILRKVSGHPNIIQLKDTYETN 96

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 12/85 (14%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK----------DVIIQDDDVDCTM 148
           E +  ++ LG G++G+V+L +++ +     A+KV+KK          D    +   +   
Sbjct: 36  ESYFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 149 TEKRILALAAKHPFLTALHSCFQTK 173
            E  +L  +  HP +  L   F+ K
Sbjct: 95  NEISLL-KSLDHPNIIKLFDVFEDK 118

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           K LG+GSF        +  S++ +AVK      II       T  E   L L   HP + 
Sbjct: 17  KPLGEGSFSICRKCVHK-KSNQAFAVK------IISKRMEANTQKEITALKLCEGHPNIV 69

Query: 165 ALHSCFQTK 173
            LH  F  +
Sbjct: 70  KLHEVFHDQ 78

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD---DVDCTMTEKRILA 155
           + +   + LG G F  V    ++  + + YA K +KK  +         +    E  IL 
Sbjct: 5   DHYEMGEELGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 156 LAAKHPFLTALHSCFQTK 173
              +HP +  LH  F+ K
Sbjct: 64  E-IRHPNIITLHDIFENK 80

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +  ++ LG G+FG V    ++ ++  V+  K +     +    V     E  I+    
Sbjct: 51  DYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYPLDKYTV---KNEISIMNQ-L 105

Query: 159 KHPFLTALHSCFQTK 173
            HP L  LH  F+ K
Sbjct: 106 HHPKLINLHDAFEDK 120

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 47.5 bits (113), Expect = 5e-07
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 8/73 (10%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
               K+LG GS G V+            AVK +        D  D  + E ++L  +  H
Sbjct: 17  VVSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLI------DFCDIALMEIKLLTESDDH 68

Query: 161 PFLTALHSCFQTK 173
           P +   +    T 
Sbjct: 69  PNVIRYYCSETTD 81

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILA 155
           + +   + LG G F  V    ++ S+   YA K +KK            +    E  IL 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 156 LAAKHPFLTALHSCFQTK 173
               H  +  LH  ++ +
Sbjct: 71  Q-VLHHNVITLHDVYENR 87

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILA 155
           + +   + LG G F  V    ++ S+   YA K +KK            +    E  IL 
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 156 LAAKHPFLTALHSCFQTK 173
              +HP +  LH  ++ K
Sbjct: 70  E-IQHPNVITLHEVYENK 86

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 5/78 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD---DVDCTMTEKRILA 155
           + +   + LG G F  V    ++ S+   YA K +KK            +    E  IL 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 156 LAAKHPFLTALHSCFQTK 173
               HP +  LH  ++ +
Sbjct: 71  Q-VLHPNIITLHDVYENR 87

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 47.0 bits (112), Expect = 7e-07
 Identities = 13/72 (18%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
             F  ++++G G++G+V        + ++ A+KV+     +  D+ +    E  +L   +
Sbjct: 24  GIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYS 78

Query: 159 KHPFLTALHSCF 170
            H  +   +  F
Sbjct: 79  HHRNIATYYGAF 90

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +   + +G GS+        + +++  +AVK++ K      ++++       IL    
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHK-ATNMEFAVKIIDKSKRDPTEEIE-------ILLRYG 73

Query: 159 KHPFLTALHSCFQTK 173
           +HP +  L   +   
Sbjct: 74  QHPNIITLKDVYDDG 88

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 9/69 (13%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLT 164
           +VLG G  GKV+    R  + +  A+K+L                E      A+  P + 
Sbjct: 35  QVLGLGVNGKVLECFHR-RTGQKCALKLLYD--------SPKARQEVDHHWQASGGPHIV 85

Query: 165 ALHSCFQTK 173
            +   ++  
Sbjct: 86  CILDVYENM 94

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E +   + LG+G FG V    +  SS + Y  K +K     +  D      E  IL + A
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKV----KGTDQVLVKKEISILNI-A 58

Query: 159 KHPFLTALHSCFQTK 173
           +H  +  LH  F++ 
Sbjct: 59  RHRNILHLHESFESM 73

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 10/135 (7%)

Query: 39  TRGPRRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGL 98
             G  R ++       +G       T   +        + +       +        V  
Sbjct: 102 IPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYP----QPVEIKHDHVL- 156

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +   + LG G+FG V    +R ++   +A K +       + D +    E + ++   
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTP---HESDKETVRKEIQTMS-VL 211

Query: 159 KHPFLTALHSCFQTK 173
           +HP L  LH  F+  
Sbjct: 212 RHPTLVNLHDAFEDD 226

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E +  +  LG G+FGKV  A+ +  +  + A KV++      +++++  + E  ILA   
Sbjct: 19  EVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIE---TKSEEELEDYIVEIEILA-TC 73

Query: 159 KHPFLTALHSCF 170
            HP++  L   +
Sbjct: 74  DHPYIVKLLGAY 85

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMT-EKRILALAAKHPFL 163
            +LG+GS+GKV       +     AVK+LKK  + +  + +  +  E ++L    +H  +
Sbjct: 11  DLLGEGSYGKVKEVLDSETLCRR-AVKILKKKKLRRIPNGEANVKKEIQLLRR-LRHKNV 68

Query: 164 TALH 167
             L 
Sbjct: 69  IQLV 72

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 89  SSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTM 148
           S         ED   +  +G+G++G V     + S  ++ AVK +     + + +    +
Sbjct: 12  SPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSG-QIMAVKRI--RSTVDEKEQKQLL 68

Query: 149 TEKRILALAAKHPFLTALHSCFQTKVKCS 177
            +  ++  ++  P++   +     +  C 
Sbjct: 69  MDLDVVMRSSDCPYIVQFYGALFREGDCW 97

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 8/91 (8%)

Query: 85  SGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDV 144
           +G              + F+K +G G+FG   L   + + + V AVK +++   I ++  
Sbjct: 8   TGPLDMPIMHDSD--RYDFVKDIGSGNFGVARLMRDKLTKELV-AVKYIERGAAIDEN-- 62

Query: 145 DCTMTEKRILALAAKHPFLTALHSCFQTKVK 175
                E        +HP +        T   
Sbjct: 63  --VQREIINHRS-LRHPNIVRFKEVILTPTH 90

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 8/102 (7%)

Query: 81  SGGGSGRGS-----SGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK 135
           S G SG+ +      G   +  + D   +  +G G+ G+V     R +   V AVK +  
Sbjct: 2   SSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTG-HVIAVKQM-- 58

Query: 136 DVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS 177
                 ++    + +  ++  +   P++      F T     
Sbjct: 59  RRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +ED+  ++ LG+G++G+V LA  R + + V AVK++     +  D  +    E  I  + 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV-AVKIVDMKRAV--DCPENIKKEICINKM- 61

Query: 158 AKHPFLTALHSCFQTKVK 175
             H  +   +   +    
Sbjct: 62  LNHENVVKFYGHRREGNI 79

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
            D      LG G +G+V     +  S  V AVK LK+D +  ++
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEE 55

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 8/79 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKDVIIQDDDVDCTMTEKRILA 155
               +I  LGKG+FG V L       D      AVK L+     Q  D      E +IL 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILK 79

Query: 156 LAAKHPFLTALH-SCFQTK 173
            A    F+       +   
Sbjct: 80  -ALHSDFIVKYRGVSYGPG 97

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 6/74 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKDVIIQDDDVDCTMTEKRILA 155
                I+ LG+G FGKV L     ++D      AVK LK D             E  IL 
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILR 88

Query: 156 LAAKHPFLTALHSC 169
               H  +     C
Sbjct: 89  -TLYHEHIIKYKGC 101

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 9/69 (13%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
            ++    +V+G+G+FG V  A+ R    +V A+K ++      + +    + E R L+  
Sbjct: 7   YKEIEVEEVVGRGAFGVVCKAKWRAK--DV-AIKQIE-----SESERKAFIVELRQLS-R 57

Query: 158 AKHPFLTAL 166
             HP +  L
Sbjct: 58  VNHPNIVKL 66

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +ED+  ++ LG+G++G+V LA  R + + V AVK++     +  D  +    E  I  + 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV-AVKIVDMKRAV--DCPENIKKEICINKM- 61

Query: 158 AKHPFLTALHSCFQTKVK 175
             H  +   +   +    
Sbjct: 62  LNHENVVKFYGHRREGNI 79

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 44.4 bits (105), Expect = 6e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
            D      LG G +G+V     +  S  V AVK LK+D +  ++
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTV-AVKTLKEDTMEVEE 262

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + F  ++ +G GSFG V  A    +S+ V A+K +       ++     + E R L    
Sbjct: 54  KLFSDLREIGHGSFGAVYFARDVRNSEVV-AIKKMSYSGKQSNEKWQDIIKEVRFLQ-KL 111

Query: 159 KHPFLTALHSCF 170
           +HP       C+
Sbjct: 112 RHPNTIQYRGCY 123

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 3/83 (3%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           +V  +D   I  LG+G++G V       S  ++ AVK +     +   +    + +  I 
Sbjct: 3   EVKADDLEPIMELGRGAYGVVEKMRHVPSG-QIMAVKRI--RATVNSQEQKRLLMDLDIS 59

Query: 155 ALAAKHPFLTALHSCFQTKVKCS 177
                 PF    +     +    
Sbjct: 60  MRTVDCPFTVTFYGALFREGDVW 82

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 43.9 bits (104), Expect = 7e-06
 Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKDVIIQDDDVDCTMTEKRILA 155
               F++ LGKG+FG V +       D      AVK L+        D      E  IL 
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILK 97

Query: 156 LAAKHPFLTALHSC 169
            + +H  +      
Sbjct: 98  -SLQHDNIVKYKGV 110

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 6/74 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKDVIIQDDDVDCTMTEKRILA 155
                I+ LG+G FGKV L       D      AVK LK +     + +     E  IL 
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILR 78

Query: 156 LAAKHPFLTALHSC 169
               H  +      
Sbjct: 79  -NLYHENIVKYKGI 91

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKDVIIQDDDVDCTMTEKRILA 155
               F++ LGKG+FG V +       D      AVK L+        D      E  IL 
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILK 66

Query: 156 LAAKHPFLTALHSC 169
            + +H  +      
Sbjct: 67  -SLQHDNIVKYKGV 79

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ 140
           GS  GSSG   ++    +     +GKGS+G V LA    + +  YA+KVL K  +I+
Sbjct: 1   GSS-GSSGDCVQLN--QYTLKDEIGKGSYGVVKLAYNE-NDNTYYAMKVLSKKKLIR 53

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY-AVKVLKKDVIIQDDDVDCTMTEKRILALA 157
            D  F  V+G+G+FG+V+ A  +     +  A+K +K+      DD      E  +L   
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKL 82

Query: 158 AKHP 161
             HP
Sbjct: 83  GHHP 86

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E F  ++ +GKGSFG+V        + +V A+K++  D+   +D+++    E  +L+   
Sbjct: 22  ELFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQ-C 77

Query: 159 KHPFLTALHSCF 170
             P++T  +  +
Sbjct: 78  DSPYVTKYYGSY 89

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 14/87 (16%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
           GSG G     ++   +    +K +GKG +G+V + + RG   +V AVKV          +
Sbjct: 22  GSGSGLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGE--KV-AVKVFF------TTE 72

Query: 144 VDCTMTEKRILALAA-KHP----FLTA 165
                 E  I      +H     F+ A
Sbjct: 73  EASWFRETEIYQTVLMRHENILGFIAA 99

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +D+   +V+G G+   V  A       E  A+K +  ++      +D  + E + ++   
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCA-PKKEKVAIKRI--NLEKCQTSMDELLKEIQAMSQ-C 70

Query: 159 KHPFLTALHSCFQTKVK 175
            HP + + ++ F  K +
Sbjct: 71  HHPNIVSYYTSFVVKDE 87

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAE---KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA 155
           +D   ++ LG GSFG V   E     G +  V AVK LK DV+ Q + +D  + E   + 
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMH 76

Query: 156 LAAKHPFLTALH 167
            +  H  L  L+
Sbjct: 77  -SLDHRNLIRLY 87

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD 141
           ++   ++ +GKG FG VML + RG+  +V AVK +K D   Q 
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGN--KV-AVKCIKNDATAQA 60

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQDDDVDCTMTEKRIL 154
               F K LG G+FGKV+ A   G          AVK+LK        + +  M+E ++L
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVL 80

Query: 155 ALAAKHPFLTALHSC 169
           +    H  +  L   
Sbjct: 81  SYLGNHMNIVNLLGA 95

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY--AVKVLKKDVIIQDDDVD 145
           + F   ++LGKG FG V  A+ +         AVK+LK D+I   D  +
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKD 136
           ED    + +G+G+FG+V     R  +  V AVK  ++ 
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLV-AVKSCRET 150

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 12/111 (10%)

Query: 43  RRHKKEYISSINKGARSATPCTTPRSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDF- 101
             H    I +           +  +SP  + ++  T T             +   + D  
Sbjct: 7   HHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLK 66

Query: 102 -------HFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQD 141
                    I+ LG G+FG+V   +  G  ++      AVK L +    QD
Sbjct: 67  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 117

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD 141
           ++   ++ +GKG FG VML + RG+  +V AVK +K D   Q 
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGN--KV-AVKCIKNDATAQA 232

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKD 136
            +  +++ +G+G+FG+V  A   G          AVK+LK++
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE 88

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAE----KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           +     K LG+G+FG+V+ A+     + ++    AVK+LK+       +    M+E +IL
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKIL 79

Query: 155 ALAAKHP 161
                H 
Sbjct: 80  IHIGHHL 86

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 89  SSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTM 148
                 ++  +DF  I  LG G+ G V     + S   V A K++  +  I+    +  +
Sbjct: 23  QKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSG-LVMARKLIHLE--IKPAIRNQII 79

Query: 149 TEKRILALAAKHPFLTALHSCFQTKVKCS 177
            E ++L      P++   +  F +  + S
Sbjct: 80  RELQVLH-ECNSPYIVGFYGAFYSDGEIS 107

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 41.1 bits (97), Expect = 7e-05
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQDDDVDCTMTEKRIL 154
           E+  F KVLG G+FGKVM A   G S        AVK+LK+       + +  M+E +++
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMM 102

Query: 155 ALAAKHP 161
                H 
Sbjct: 103 TQLGSHE 109

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 41.1 bits (97), Expect = 7e-05
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
            +  F K LG G+FGKV+ A   G   E      AVK+LK       D+ +  M+E +I+
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIM 103

Query: 155 ALAAKHP 161
           +   +H 
Sbjct: 104 SHLGQHE 110

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 41.1 bits (97), Expect = 7e-05
 Identities = 12/72 (16%), Positives = 30/72 (41%), Gaps = 5/72 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +   + +G+G+ G V  A    +  EV A++ +    + Q    +  + E  ++    
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEV-AIRQMN---LQQQPKKELIINEILVMR-EN 74

Query: 159 KHPFLTALHSCF 170
           K+P +      +
Sbjct: 75  KNPNIVNYLDSY 86

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.7 bits (96), Expect = 9e-05
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY--AVKVLKKDVIIQDDDVD 145
                 K+LG+G FG VM    +         AVK +K D   Q +  +
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEE 82

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQDDDVDCTMTEKRIL 154
           +     K LG+G+FG+V+ A+  G          AVK+LK+       +    M+E +IL
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKIL 84

Query: 155 ALAAKHP 161
                H 
Sbjct: 85  IHIGHHL 91

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
           +D  F+K LG G FG V   + RG  D V A+K++K+  + +D+
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYD-V-AIKMIKEGSMSEDE 65

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQD 141
           E     + LG+GSFG V     +G   +      A+K + +   +++
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 84  GSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD 143
           GSG G     ++         + +GKG FG+V   + RG   EV AVK+          +
Sbjct: 27  GSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGE--EV-AVKIFS------SRE 77

Query: 144 VDCTMTEKRILALAA-KHP----FLTALHSCFQTKVKCS 177
                 E  I      +H     F+ A +    T  +  
Sbjct: 78  ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
            +  F++ +G G FG V L       D+V A+K +++  + ++D
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLN-KDKV-AIKTIREGAMSEED 49

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
                   +G+GS G V LA ++ S  +V AVK++    + +    +    E  I+    
Sbjct: 45  LLLDSYVKIGEGSTGIVCLAREKHSGRQV-AVKMMD---LRKQQRRELLFNEVVIMR-DY 99

Query: 159 KHPFLTALHSCF 170
           +H  +  ++  +
Sbjct: 100 QHFNVVEMYKSY 111

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
           E    ++ LG G FG+V +    G +  V AVK LK+  +  D 
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTK-V-AVKSLKQGSMSPDA 54

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E       LG+G FG+V +    G++  V A+K LK   +  +      + E +++    
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-V-AIKTLKPGTMSPEA----FLQEAQVMK-KL 236

Query: 159 KHPFLTALH 167
           +H  L  L+
Sbjct: 237 RHEKLVQLY 245

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKD 136
           ++    K LG+G FGKV+ A              AVK+LK++
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E       LG+G FG+V +    G++  V A+K LK   +  +      + E +++    
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-V-AIKTLKPGTMSPEA----FLQEAQVMK-KL 319

Query: 159 KHPFLTALH 167
           +H  L  L+
Sbjct: 320 RHEKLVQLY 328

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 14/73 (19%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L++   ++++G+G +G V           V AVKV          +    + EK I  + 
Sbjct: 12  LDNLKLLELIGRGRYGAVYKGSLDER--PV-AVKVFSF------ANRQNFINEKNIYRVP 62

Query: 158 A-KHP----FLTA 165
             +H     F+  
Sbjct: 63  LMEHDNIARFIVG 75

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E     K LG G FG+V +A     +  V AVK +K   +  +      + E  ++    
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK-V-AVKTMKPGSMSVEA----FLAEANVMK-TL 240

Query: 159 KHPFLTALH 167
           +H  L  LH
Sbjct: 241 QHDKLVKLH 249

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD 142
           E+   +K LG G FG V L + +G  D V AVK++K+  + +D+
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYD-V-AVKMIKEGSMSEDE 49

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQD 141
           ++   I+ LG G+FG+V   +  G  ++      AVK L +    QD
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLK 134
           +  +  LG+G+FGKV+      +     AVK++K
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK 49

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 14/86 (16%)

Query: 85  SGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDV 144
           SG      +          ++V  +G FG V  A+       V AVK+          D 
Sbjct: 10  SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE--YV-AVKIFPI------QDK 60

Query: 145 DCTMTEKRILALAA-KHP----FLTA 165
                E  + +L   KH     F+ A
Sbjct: 61  QSWQNEYEVYSLPGMKHENILQFIGA 86

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 8/77 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY------AVKVLKKDVIIQDDDVDCTMTEKR 152
           +     K LG+G+FG+V++AE  G   +        AVK+LK D    + D+   ++E  
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 92

Query: 153 ILALAAKHPFLTALHSC 169
           ++ +  KH  +  L   
Sbjct: 93  MMKMIGKHKNIINLLGA 109

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 14/58 (24%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQDDDVDCTMTEKR 152
            D    + LG+G+FGKV LAE    S        AVK LK          D T+  ++
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK----------DPTLAARK 62

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY------AVKVLKKDVIIQDDDVDCTMTEKR 152
           +     K LG+G FG+V++AE  G   +        AVK+LK D    + D+   ++E  
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEME 138

Query: 153 ILALAAKHPFLTALHSC 169
           ++ +  KH  +  L   
Sbjct: 139 MMKMIGKHKNIINLLGA 155

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           +  +  LG+G+FGKV+            A+K+++          +    E  +L    + 
Sbjct: 21  YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN----VGKYREAARLEINVLKKIKEK 76

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKD 136
            +F  IKVLG G+FG V         ++V    A+K L++ 
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY------AVKVLKKD 136
           +     K LG+G+FG+V+LAE  G   +        AVK+LK D
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 112

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           F  I+ +G G+FG+V+L +   +     AVKV++               E  IL      
Sbjct: 37  FLVIRKMGDGTFGRVLLCQHIDNKKYY-AVKVVRN----IKKYTRSAKIEADILKKIQND 91

Query: 161 P 161
            
Sbjct: 92  D 92

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTM----TEKRI 153
             +  + K +GKG FG V           V A+K L       + ++         E  I
Sbjct: 18  DNEIEYEKQIGKGGFGLVHKGRLVKDKSVV-AIKSLILGDSEGETEMIEKFQEFQREVFI 76

Query: 154 LALAAKHPFLTAL 166
           ++    HP +  L
Sbjct: 77  MS-NLNHPNIVKL 88

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 14/58 (24%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQDDDVDCTMTEKR 152
            D      LG+G+FGKV LAE      E      AVK LK          + + + ++
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----------EASESARQ 88

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 18/116 (15%), Positives = 30/116 (25%), Gaps = 37/116 (31%)

Query: 36  QRDTRGPRRHKKEYISSINKGARSATPCTTPRS-PRERAARPYTKTSGGGSGRGSSGGDR 94
           + + R P    + YI   ++            +  R +   PY K              R
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQV-FAKYNVSRLQ---PYLKL-------------R 141

Query: 95  KV--GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTM 148
           +    L     + + G    GK  +           A+ V           V C M
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWV-----------ALDVC------LSYKVQCKM 180

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKD 136
               F++ LG+  FGKV      G +        A+K LK  
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK 50

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 14/72 (19%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
            D   ++ +GKG +G+V     +G    V AVK+          D      E  +     
Sbjct: 8   RDITLLECVGKGRYGEVWRGSWQGE--NV-AVKIFS------SRDEKSWFRETELYNTVM 58

Query: 159 -KHP----FLTA 165
            +H     F+ +
Sbjct: 59  LRHENILGFIAS 70

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVY---AVKVLKKD 136
            +   +KVLG G FG V         + +     +KV++  
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK 53

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.74
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.7
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.7
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.69
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.66
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.6
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.59
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.59
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.58
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.57
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.56
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.56
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.55
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.52
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.51
3uqc_A	286	Probable conserved transmembrane protein; structur	99.45
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.44
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.43
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.42
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.42
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.42
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.42
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.41
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.41
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.41
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.4
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.4
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.4
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.39
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.38
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.38
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.37
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.37
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.37
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.36
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.36
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.35
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.34
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.34
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.33
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.33
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.33
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.33
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.33
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.32
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.32
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.32
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.32
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.32
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.32
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.32
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.31
3niz_A	311	Rhodanese family protein; structural genomics, str	99.31
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.31
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.31
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.31
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.3
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.3
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.3
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.3
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.3
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.3
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.3
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.3
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.29
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.29
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.29
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.29
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.29
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.28
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.28
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.28
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.28
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.28
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.28
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.28
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.26
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.26
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.26
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.25
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.25
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.25
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.25
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.25
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.25
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.24
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.24
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.24
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.23
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.23
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.23
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.22
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.22
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.22
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.22
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.22
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.22
3bhy_A	283	Death-associated protein kinase 3; death associate	99.22
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.22
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.22
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.21
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.21
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.21
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.21
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.21
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.21
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.21
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.21
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.21
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.21
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.21
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.21
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.21
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.2
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.2
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.2
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.2
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.19
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.19
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.19
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.19
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.18
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.18
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.18
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.18
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.18
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.18
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.17
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.17
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.17
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.17
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.17
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.16
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.16
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.16
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.15
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.15
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.15
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.15
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.14
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.14
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.14
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.14
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.14
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.13
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.13
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.13
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.12
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.12
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.12
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.11
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.1
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.1
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.08
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.05
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.03
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.02
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.02
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.02
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.02
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.01
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.01
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.01
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.99
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.99
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.96
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.94
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.93
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.9
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	98.9
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.9
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.87
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.87
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.87
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.86
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.86
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.86
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.85
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.85
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.84
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.82
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.81
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.8
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.8
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.79
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.73
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.69
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.45
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.38
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.33
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.26
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.82
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.66
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.75
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	94.09
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	94.02
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.68
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	89.46
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	87.56
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	86.4

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.74  E-value=2.5e-18  Score=132.98  Aligned_cols=82  Identities=38%  Similarity=0.613  Sum_probs=73.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ....++|+++++||+|+||+||+|.++.+ ++.||||+|++..+........+.+|+.+|..| +|||||+++++|++.+
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~-~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELAT-SREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDE  105 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCC-CCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCC
Confidence            44567899999999999999999999999 999999999876554455677899999999999 9999999999999999


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      ++||
T Consensus       106 ~~yi  109 (311)
T 4aw0_A          106 KLYF  109 (311)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9886

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.70  E-value=4e-17  Score=128.12  Aligned_cols=80  Identities=21%  Similarity=0.397  Sum_probs=66.1

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ..+++|++++.||+|+||.||+|.++.+ |+.||||+|.+... .....+.+.+|+.+|..| +|||||+++++|++.+.
T Consensus        21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~   97 (350)
T 4b9d_A           21 QSMEKYVRLQKIGEGSFGKAILVKSTED-GRQYVIKEINISRM-SSKEREESRREVAVLANM-KHPNIVQYRESFEENGS   97 (350)
T ss_dssp             SCCCCEEEEEEC------CEEEEEETTT-CCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             CcccceEEeEEEecCCCeEEEEEEECCC-CCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCE
Confidence            3568999999999999999999999999 99999999987654 344567899999999999 99999999999999999


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        98 ~yi  100 (350)
T 4b9d_A           98 LYI  100 (350)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            886

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.70  E-value=6.6e-17  Score=129.70  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=68.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|+++++||+|+||.||+|.++.+ |+.||||++....   ....+.+.+|+.+|+.| +|||||+|+++|.+.+.+||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~t-g~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~i  225 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSS-GKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWV  225 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEESTT---CSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCC-CCEEEEEEEeccc---hhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEE
Confidence            5699999999999999999999999 9999999998653   34456799999999999 99999999999999999886

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.69  E-value=5.8e-17  Score=123.43  Aligned_cols=80  Identities=29%  Similarity=0.464  Sum_probs=64.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++++.||+|+||.||+|.++.+ ++.||||++++...........+.+|+.+|+.+ +|||||+++++|.+.+.+
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~-~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHTTT-GQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECTTT-CCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEECCC-CCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence            357899999999999999999999999 999999999876654555667899999999999 999999999999999988


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        89 ~i   90 (275)
T 3hyh_A           89 IM   90 (275)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.66  E-value=2.9e-16  Score=123.08  Aligned_cols=76  Identities=18%  Similarity=0.176  Sum_probs=68.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|++++.||+|+||.||+|.++.+ |+.||||+++...   ....+.+.+|+.+|+.+ +|||||+++++|.+.+.+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~t-g~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSS-GKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEGGG---CSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCC-CCEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence            35699999999999999999999999 9999999998653   34456789999999999 9999999999999999988


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       148 i  148 (346)
T 4fih_A          148 V  148 (346)
T ss_dssp             E
T ss_pred             E
Confidence            6

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.60  E-value=2.7e-15  Score=119.80  Aligned_cols=71  Identities=23%  Similarity=0.390  Sum_probs=62.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ++|+++++||+|+||.||+|.++.+ |+.||||+|++... .....+.+.+|+.+|+.| +|||||+++++|..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~  124 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLT-GQQVAIKKIPNAFD-VVTNAKRTLRELKILKHF-KHDNIIAIKDILRP  124 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCC-CCEEEEEEECcccc-chHHHHHHHHHHHHHHhc-CCCCcceEeeeeec
Confidence            5799999999999999999999999 99999999975532 344567889999999999 99999999998764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.59  E-value=1.2e-15  Score=117.54  Aligned_cols=73  Identities=30%  Similarity=0.438  Sum_probs=61.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      +++|++++.||+|+||.||+|.++.+ +..||||+++...  .....+.+.+|+.+|..| +|||||+++++|...+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~-~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~   76 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVD-DCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLEKN   76 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTT-CCEEEEEEEEECS--SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCC-CCEEEEEEEeccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecC
Confidence            35799999999999999999999999 9999999997543  344567899999999999 9999999999997654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.59  E-value=1.9e-15  Score=117.89  Aligned_cols=80  Identities=24%  Similarity=0.325  Sum_probs=67.3

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      ..+..++|.+.++||+|+||.||+|.++     .+ +..||||+++..   .....+.|.+|+.+|..| +|||||++++
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~-~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g  110 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQD-KMLVAVKALKEA---SESARQDFQREAELLTML-QHQHIVRFFG  110 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC----CEEEEEEEESCC---SHHHHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCC-CeEEEEEEECcC---CHHHHHHHHHHHHHHHhC-CCCCCCcEEE
Confidence            3456678999999999999999999875     35 678999999754   345567899999999999 9999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|.+.+.+||
T Consensus       111 ~~~~~~~~~l  120 (329)
T 4aoj_A          111 VCTEGRPLLM  120 (329)
T ss_dssp             EECSSSSEEE
T ss_pred             EEEECCEEEE
Confidence            9998887774

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.58  E-value=1.6e-15  Score=116.82  Aligned_cols=79  Identities=24%  Similarity=0.296  Sum_probs=65.0

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|.+.+.||+|+||.||+|.+.     .+ +..||||.++..   .....+.+.+|+.+|..| +|||||+++++
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~-~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~   83 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQD-KILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGV   83 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC-----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCC-CEEEEEEEeCCC---ChHHHHHHHHHHHHHHhC-CCCCCccEEEE
Confidence            456678999999999999999999875     34 678999999754   345567899999999999 99999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |.+.+.+||
T Consensus        84 ~~~~~~~~l   92 (299)
T 4asz_A           84 CVEGDPLIM   92 (299)
T ss_dssp             ECSSSSEEE
T ss_pred             EeeCCEEEE
Confidence            998887775

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.57  E-value=1.1e-15  Score=118.00  Aligned_cols=81  Identities=43%  Similarity=0.649  Sum_probs=63.0

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....++|++++.||+|+||.||+|.+.   .+ ++.||+|++++... .......+.+|+.+|..+ +|||||+++++|+
T Consensus        20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~   96 (304)
T 3ubd_A           20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDA-RQLYAMKVLKKATL-KVRDRVRTKMERDILVEV-NHPFIVKLHYAFQ   96 (304)
T ss_dssp             CCCGGGEEEEEEEECGGGCEEEEEEECSSTTT-TCEEEEEEEESEEE-EEEECC------CCCCCC-CCTTEECEEEEEE
T ss_pred             cCCccccEEEEEEecCCCeEEEEEEEccCCCC-CEEEEEEEEehHHc-ChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEE
Confidence            344578999999999999999999885   34 67899999987644 333445788999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      +++.+||
T Consensus        97 ~~~~~~i  103 (304)
T 3ubd_A           97 TEGKLYL  103 (304)
T ss_dssp             ETTEEEE
T ss_pred             ECCEEEE
Confidence            9999885

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.56  E-value=5.5e-15  Score=114.29  Aligned_cols=82  Identities=22%  Similarity=0.280  Sum_probs=66.3

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccc
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALH  167 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~  167 (178)
                      ...+..++++++++||+|+||.||+|.+.     .+ +..||||.++...  .....+.|.+|+.+|..+ +|||||+|+
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~-~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l-~HpNIV~l~   95 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQ-TQAVAIKTLKDKA--EGPLREEFRHEAMLRARL-QHPNVVCLL   95 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC--------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCC-CeEEEEEEECccc--ChHHHHHHHHHHHHHHhC-CCCCCCCcc
Confidence            34567788999999999999999999864     24 6789999997542  334567899999999999 999999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      ++|...+.+||
T Consensus        96 g~~~~~~~~~l  106 (308)
T 4gt4_A           96 GVVTKDQPLSM  106 (308)
T ss_dssp             EEECSSSSCEE
T ss_pred             eEEEECCEEEE
Confidence            99988777664

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.56  E-value=8.6e-15  Score=112.24  Aligned_cols=69  Identities=17%  Similarity=0.232  Sum_probs=61.1

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      |++.++||+|+||.||+|.+..+ +..||+|.+..... .......+.+|+.+|+.| +|||||+++++|++
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~   96 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTET-TVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWES   96 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCC-CeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEee
Confidence            47888999999999999999999 99999999986644 344567899999999999 99999999999876

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.55  E-value=1.4e-14  Score=120.68  Aligned_cols=77  Identities=23%  Similarity=0.462  Sum_probs=69.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++++.||+|+||.||+|.++.+ |..||+|+|...   .....+.+.+|+.+|..| +|||||+|+++|.+.+.+
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~t-g~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  229 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERAT-GNNFAAKFVMTP---HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEM  229 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECC---SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEE
T ss_pred             CccccEEEEEEeeccCeEEEEEEECCC-CCEEEEEEEecc---chhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence            357899999999999999999999999 999999999765   234456789999999999 999999999999999988


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus       230 ~i  231 (573)
T 3uto_A          230 VM  231 (573)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.52  E-value=1.4e-14  Score=113.13  Aligned_cols=73  Identities=19%  Similarity=0.199  Sum_probs=64.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...+.|++.++||+|+||.||+|.++.+ |..||||+++....        ..+|+.+|..| +|||||+++++|.+.+.
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~-g~~vAiK~i~~~~~--------~~~E~~il~~l-~HpnIV~l~~~~~~~~~  124 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQT-GFQCAVKKVRLEVF--------RVEELVACAGL-SSPRIVPLYGAVREGPW  124 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEETTTC--------CTHHHHTTTTC-CCTTBCCEEEEEEETTE
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCC-CCEEEEEEECHHHh--------HHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            3456799999999999999999999999 99999999986532        24799999999 99999999999999998


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       125 ~~i  127 (336)
T 4g3f_A          125 VNI  127 (336)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            885

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.51  E-value=1.6e-14  Score=121.53  Aligned_cols=84  Identities=26%  Similarity=0.525  Sum_probs=69.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHH---HHHHHhcCCCCcccccee
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK---RILALAAKHPFLTALHSC  169 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei---~il~~l~~hp~iv~l~~~  169 (178)
                      ...+.+++|+++++||+|+||.||+|.++.+ |..||||+|.+..+........+.+|.   .++..+ +|||||+|+++
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~t-g~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~  260 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYA  260 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEE
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECCC-CCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEE
Confidence            3467889999999999999999999999999 999999999876543334444555664   445556 89999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |++.+++||
T Consensus       261 f~~~~~lyl  269 (689)
T 3v5w_A          261 FHTPDKLSF  269 (689)
T ss_dssp             EECSSEEEE
T ss_pred             EEECCEEEE
Confidence            999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.45  E-value=3.6e-13  Score=102.76  Aligned_cols=81  Identities=12%  Similarity=0.117  Sum_probs=70.1

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++++.||+|+||.||+|.+..+ ++.||+|++.............+.+|+.++..+ .||||+++++++...+.
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~  105 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTAL-DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAG  105 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTT-TEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCC-CceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCc
Confidence            4457799999999999999999999988 999999999865433344557899999999999 99999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       106 ~~l  108 (286)
T 3uqc_A          106 GLV  108 (286)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            774

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.44  E-value=2.1e-13  Score=108.44  Aligned_cols=84  Identities=30%  Similarity=0.593  Sum_probs=73.6

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.+++|+++++||+|+||.||++.+..+ +..||+|++.+...........+.+|+.+|..+ .|||||+++++|.+
T Consensus         9 ~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~-~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~   86 (384)
T 4fr4_A            9 NEDVNFDHFEILRAIGKGSFGKVCIVQKNDT-KKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQD   86 (384)
T ss_dssp             CCCCCGGGEEEEEEEECCTTCCEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred             CCCCChHHeEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEe
Confidence            4567789999999999999999999999988 999999999865443445567899999999999 99999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        87 ~~~~~l   92 (384)
T 4fr4_A           87 EEDMFM   92 (384)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            888774

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=106.87  Aligned_cols=76  Identities=18%  Similarity=0.220  Sum_probs=62.0

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++..++|++.+.||+|+||.||+|.+.    ..||||+++.... .....+.|.+|+.+|..+ +|||||++++++.. +
T Consensus        32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~  104 (307)
T 3omv_A           32 EIEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-D  104 (307)
T ss_dssp             BCCTTSCCEEEECCCCSSSEEEEEESS----SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-S
T ss_pred             EEcHHHeEEeeEEeeCCCcEEEEEEEC----CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-C
Confidence            466788999999999999999999754    3599999875432 344567899999999999 99999999998754 4


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                      ++|
T Consensus       105 ~~~  107 (307)
T 3omv_A          105 NLA  107 (307)
T ss_dssp             SCE
T ss_pred             eEE
Confidence            444

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.42  E-value=3.5e-13  Score=105.89  Aligned_cols=85  Identities=65%  Similarity=1.086  Sum_probs=69.6

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.+++|+++++||+|+||.||+|.+..+ +..||+|++.+...........+.+|+.++..+..||||++++++|.+
T Consensus        17 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~   95 (353)
T 3txo_A           17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKET-GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT   95 (353)
T ss_dssp             ------CCEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             cCCCchhheEEEEEEeeCCCEEEEEEEEcCC-CCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe
Confidence            4457789999999999999999999999988 999999999865443445567789999999987579999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        96 ~~~~~l  101 (353)
T 3txo_A           96 PDRLFF  101 (353)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            888875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.42  E-value=6.1e-13  Score=103.47  Aligned_cols=82  Identities=23%  Similarity=0.427  Sum_probs=70.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ....+++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.+|+.+ .||||+++++++...
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~   86 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETE   86 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEC
Confidence            344578899999999999999999999988 99999999986543 344567789999999999 999999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        87 ~~~~l   91 (328)
T 3fe3_A           87 KTLYL   91 (328)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            88774

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.42  E-value=2.8e-13  Score=105.83  Aligned_cols=81  Identities=48%  Similarity=0.864  Sum_probs=70.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +.+++|+++++||+|+||.||++.+..+ +..||+|++.+...........+.+|+.+|..+ .||||++++++|.+.+.
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~   79 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKAT-GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDR   79 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCC-CCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCE
Confidence            4578999999999999999999999988 999999999865433344567789999999999 99999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        80 ~~l   82 (337)
T 1o6l_A           80 LCF   82 (337)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.42  E-value=8.1e-13  Score=103.46  Aligned_cols=84  Identities=44%  Similarity=0.874  Sum_probs=72.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+.+++|++++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+..|||||+++++|.+.
T Consensus         4 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~   82 (345)
T 3a8x_A            4 DPLGLQDFDLLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE   82 (345)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CCCchhheEEEEEEEecCCeEEEEEEECCC-CCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC
Confidence            345678999999999999999999999988 9999999998765444555677899999998876899999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        83 ~~~~l   87 (345)
T 3a8x_A           83 SRLFF   87 (345)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            88875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.41  E-value=2.1e-13  Score=107.95  Aligned_cols=83  Identities=47%  Similarity=0.773  Sum_probs=61.4

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHH-HHHhcCCCCccccceeEEe
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI-LALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~~hp~iv~l~~~~~~  172 (178)
                      .....++|+++++||+|+||.||++.+..+ +..||+|++.+...........+.+|..+ +..+ .|||||+++++|.+
T Consensus        33 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~  110 (373)
T 2r5t_A           33 PHAKPSDFHFLKVIGKGSFGKVLLARHKAE-EVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQT  110 (373)
T ss_dssp             TTCCGGGEEEEEEEECCTTCEEEEEEETTT-CCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEEC
T ss_pred             CCCChhheEEEEEEeeCCCeEEEEEEEcCC-CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEe
Confidence            356778999999999999999999999988 99999999987655444555677888876 4556 99999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       111 ~~~~~l  116 (373)
T 2r5t_A          111 ADKLYF  116 (373)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            888875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.41  E-value=6.5e-13  Score=105.96  Aligned_cols=84  Identities=43%  Similarity=0.875  Sum_probs=70.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+.+++|+++++||+|+||.||++.++.+ +..||+|++.+...........+.+|+.++..+..|||||+++++|.+.
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~-~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKT-DRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            456788999999999999999999999988 9999999998765544555677899999998876899999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       126 ~~~~l  130 (396)
T 4dc2_A          126 SRLFF  130 (396)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            88875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.41  E-value=3.9e-13  Score=107.70  Aligned_cols=82  Identities=32%  Similarity=0.576  Sum_probs=71.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|+++++||+|+||.||+|.++.+ +..||+|++.+...........+.+|+.++..+ .|||||+++++|.+.+
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~-~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVRHKST-RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEEECCC-CcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECC
Confidence            35568899999999999999999999988 999999999865433344556789999999999 9999999999999998


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       143 ~~~l  146 (410)
T 3v8s_A          143 YLYM  146 (410)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.40  E-value=6.8e-13  Score=104.66  Aligned_cols=74  Identities=23%  Similarity=0.352  Sum_probs=63.4

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +.|++++.||+|+||.||+|.++   .+ ++.||+|.+.+.     ....++.+|+.+|..+..|||||+++++|.+.++
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~-~~~vAiK~i~~~-----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGP-EEKIALKHLIPT-----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSC-EEEEEEEEECTT-----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCC-CCEEEEEEEccc-----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            56999999999999999999876   34 678999998654     2345688999999998679999999999999999


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        95 ~~l   97 (361)
T 4f9c_A           95 VVI   97 (361)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            885

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.40  E-value=5.8e-13  Score=104.71  Aligned_cols=81  Identities=25%  Similarity=0.313  Sum_probs=63.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCC----CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSS----DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~----~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ++..++|++++.||+|+||.||+|.+....    ++.||||.+....  .....+.+.+|+.+|..+.+|||||+++++|
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~  137 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC  137 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence            356688999999999999999999987540    2579999987543  2344567999999999994459999999998


Q ss_pred             EeC-CeEe
Q psy1646         171 QTK-VKCS  177 (178)
Q Consensus       171 ~~~-~~~y  177 (178)
                      ..+ +.+|
T Consensus       138 ~~~~~~~~  145 (353)
T 4ase_A          138 TKPGGPLM  145 (353)
T ss_dssp             CCTTSCCE
T ss_pred             EecCCEEE
Confidence            664 4455

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.40  E-value=9.6e-13  Score=100.18  Aligned_cols=78  Identities=22%  Similarity=0.411  Sum_probs=68.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|.+.+.+|
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   77 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRET-HEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCC-CceEEEEeeeccCC-cCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEE
Confidence            46899999999999999999999988 99999999986543 344557789999999999 9999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        78 l   78 (292)
T 3o0g_A           78 L   78 (292)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.39  E-value=4.5e-13  Score=103.80  Aligned_cols=81  Identities=35%  Similarity=0.660  Sum_probs=70.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ..+++|++++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||++++++|.+.+.
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~   80 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQ   80 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSE
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCE
Confidence            4578899999999999999999999988 999999999865433334566788999999999 99999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        81 ~~l   83 (318)
T 1fot_A           81 IFM   83 (318)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.38  E-value=9.6e-13  Score=102.30  Aligned_cols=81  Identities=20%  Similarity=0.284  Sum_probs=70.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ....+|.+++.||+|+||.||++.+..+ +..+|+|++.............+.+|+.++..+ .|+||++++++|.+.+.
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  115 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADT-KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDF  115 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCe
Confidence            3456799999999999999999999988 999999999866543445667899999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       116 ~~l  118 (335)
T 2owb_A          116 VFV  118 (335)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.38  E-value=8.9e-13  Score=105.67  Aligned_cols=82  Identities=27%  Similarity=0.560  Sum_probs=71.6

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|+++++||+|+||.||++.++.+ ++.||+|++++...........+.+|+.++..+ .||||++++++|.+.+
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~-~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~  134 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVKMKQT-GQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDEN  134 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSS
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCC
Confidence            35568899999999999999999999988 999999999865433444566799999999999 9999999999999998


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       135 ~~~l  138 (412)
T 2vd5_A          135 YLYL  138 (412)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.37  E-value=9.1e-13  Score=103.37  Aligned_cols=82  Identities=37%  Similarity=0.639  Sum_probs=71.6

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...+++|++++.||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||++++++|.+.+
T Consensus        37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~  114 (350)
T 1rdq_E           37 TAQLDQFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNS  114 (350)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             CCCHHHCEEEEEeecCcCcEEEEEEECCC-CCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence            45678999999999999999999999988 999999999865443344567889999999999 9999999999999988


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       115 ~~~l  118 (350)
T 1rdq_E          115 NLYM  118 (350)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8775

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.37  E-value=1.3e-12  Score=102.32  Aligned_cols=84  Identities=56%  Similarity=0.893  Sum_probs=69.3

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|+++++||+|+||.||+|.++.+ +..||+|++.+...........+..|..++..+..||||++++++|.+.
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~   90 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK   90 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTT-TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC
Confidence            356788999999999999999999999988 9999999998654323445667889999998765899999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        91 ~~~~l   95 (345)
T 1xjd_A           91 ENLFF   95 (345)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            88875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.37  E-value=6.9e-13  Score=103.59  Aligned_cols=81  Identities=25%  Similarity=0.356  Sum_probs=69.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ..+++|.+++.||+|+||.||+|.+..+ +..||+|++.+...........+.+|+.++..+ .||||++++++|.+.+.
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~   83 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKT-QQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTD   83 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCC-CCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCE
Confidence            4467899999999999999999999988 999999999765432333456789999999999 99999999999999887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        84 ~~l   86 (336)
T 3h4j_B           84 IVM   86 (336)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.36  E-value=1e-12  Score=107.12  Aligned_cols=85  Identities=27%  Similarity=0.347  Sum_probs=73.0

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+..++|.+++.||+|+||.||+|.+..+ |..||+|++.+...........+.+|+.+++.+ .||||+++++++.
T Consensus         9 ~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~-g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~   86 (476)
T 2y94_A            9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVIS   86 (476)
T ss_dssp             CCSCCEETTEEEEEEEECCSSSCEEEEEETTT-CCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEE
T ss_pred             cCCCceecCEEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEE
Confidence            34567788999999999999999999999988 999999999865432334456899999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus        87 ~~~~~~l   93 (476)
T 2y94_A           87 TPSDIFM   93 (476)
T ss_dssp             CSSEEEE
T ss_pred             ECCEEEE
Confidence            9888774

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.35  E-value=1.2e-12  Score=105.61  Aligned_cols=82  Identities=29%  Similarity=0.598  Sum_probs=70.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|+++++||+|+||.||++.+..+ +..||+|++.+...........+.+|+.++..+ .||||++++++|.+.+
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~  147 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKNA-DKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDN  147 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSS
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcCC-CcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCC
Confidence            34567899999999999999999999988 999999999865433344456689999999999 9999999999999998


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       148 ~~~l  151 (437)
T 4aw2_A          148 NLYL  151 (437)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.34  E-value=4e-12  Score=98.46  Aligned_cols=78  Identities=23%  Similarity=0.283  Sum_probs=64.9

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..++|++++.||+|+||.||++.+..+ +..||+|++.....  ....+.+.+|+.++..+ .||||+++++++...+.+
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~   80 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVT-EEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQ   80 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECC---------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCC-CcEEEEEEEEcccc--cchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeE
Confidence            457899999999999999999999988 99999999975432  23346789999999999 999999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        81 ~l   82 (323)
T 3tki_A           81 YL   82 (323)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.34  E-value=3.9e-12  Score=100.12  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=68.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .|||||+++++|.+.+.+|
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~  104 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTT-GLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHY  104 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCC-CCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEE
Confidence            35699999999999999999999988 99999999986543 334556789999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       105 l  105 (362)
T 2bdw_A          105 L  105 (362)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.33  E-value=6.9e-12  Score=98.63  Aligned_cols=77  Identities=19%  Similarity=0.301  Sum_probs=67.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...++|++++.||+|+||.||++.+..+ +..||+|++....    .....+.+|+.+++.+ .||||++++++|.+.+.
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~   90 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYIERGA----AIDENVQREIINHRSL-RHPNIVRFKEVILTPTH   90 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTT-CCEEEEEEEESST----TSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCC-CcEEEEEEEecCc----cccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCE
Confidence            4457899999999999999999999988 9999999997642    2235688999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        91 ~~l   93 (361)
T 3uc3_A           91 LAI   93 (361)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.33  E-value=2e-12  Score=104.62  Aligned_cols=72  Identities=19%  Similarity=0.242  Sum_probs=53.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++|+++++||+|+||.||+|.+..+ +..||||++..... .....+.+.+|+.+|..+ .|||||+++++|..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  123 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLE-KRVVAIKKILRVFE-DLIDCKRILREIAILNRL-NHDHVVKVLDIVIP  123 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC---CEEEEEEECSTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCC-CcEEEEEEechhhc-CHHHHHHHHHHHHHHHhC-CCCCCCceEEEEec
Confidence            46799999999999999999999988 99999999865422 344567899999999999 99999999999854

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.33  E-value=1.4e-12  Score=101.14  Aligned_cols=83  Identities=18%  Similarity=0.310  Sum_probs=65.2

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .....+++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|..
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  104 (329)
T 3gbz_A           28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVT-NETVAIKRIRLEHE-EEGVPGTAIREVSLLKEL-QHRNIIELKSVIHH  104 (329)
T ss_dssp             ----CGGGEEEEEEEEECSSSEEEEEEETTT-TEEEEEEECCCCC---------CHHHHHHGGGC-CCTTBCCEEEEEEE
T ss_pred             CcccchhhEEEEEEEEecCCeEEEEEEECCC-CceEEEEEEccccc-ccccchhHHHHHHHHHHc-CCCCcceEEEEEec
Confidence            3455678899999999999999999999988 99999999975532 334456778999999999 99999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       105 ~~~~~l  110 (329)
T 3gbz_A          105 NHRLHL  110 (329)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            888774

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.33  E-value=2.1e-12  Score=97.63  Aligned_cols=83  Identities=31%  Similarity=0.420  Sum_probs=71.0

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+.+++|++++.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||++++++|.+.
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   81 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAREKQS-KFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDA   81 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECS
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEEEccC-CcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecC
Confidence            456788999999999999999999999988 999999999765432334456789999999999 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        82 ~~~~l   86 (279)
T 3fdn_A           82 TRVYL   86 (279)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            87664

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.33  E-value=3.3e-12  Score=97.56  Aligned_cols=82  Identities=16%  Similarity=0.121  Sum_probs=70.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|++++.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+++++++...+
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~   84 (294)
T 4eqm_A            7 KIINERYKIVDKLGGGGMSTVYLAEDTIL-NIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDD   84 (294)
T ss_dssp             SCEETTEEEEEEEEEETTEEEEEEEETTT-CSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSS
T ss_pred             hHhhccEEEEEEEccCCCEEEEEEEECCC-CCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCC
Confidence            34457899999999999999999999988 999999998754433445567899999999999 9999999999999888


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        85 ~~~l   88 (294)
T 4eqm_A           85 CYYL   88 (294)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            7764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.33  E-value=3.9e-12  Score=99.59  Aligned_cols=79  Identities=20%  Similarity=0.318  Sum_probs=67.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc--cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ--DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .+.|++++.||+|+||.||+|.+..+ +..||+|++.......  ......+.+|+.++..+ .||||++++++|...+.
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRET-GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGM  100 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCC-CCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCE
Confidence            45799999999999999999999988 9999999997543211  12356789999999999 99999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       101 ~~l  103 (351)
T 3c0i_A          101 LYM  103 (351)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.32  E-value=5.1e-12  Score=100.05  Aligned_cols=80  Identities=19%  Similarity=0.255  Sum_probs=70.2

Q ss_pred             CCCCCeEEEeeeccC--CCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKG--SFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G--~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...++|+++++||+|  +||.||++.+..+ +..||+|++..... .......+.+|+.+++.+ .|||||+++++|.+.
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   98 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPT-GEYVTVRRINLEAC-SNEMVTFLQGELHVSKLF-NHPNIVPYRATFIAD   98 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTT-CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEET
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCC-CCEEEEEEeccccc-ChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEEC
Confidence            446789999999999  9999999999988 99999999986543 345567888999999999 999999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        99 ~~~~l  103 (389)
T 3gni_B           99 NELWV  103 (389)
T ss_dssp             TEEEE
T ss_pred             CEEEE
Confidence            88774

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.32  E-value=3.6e-12  Score=100.45  Aligned_cols=79  Identities=22%  Similarity=0.290  Sum_probs=67.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc---chhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+.|++++.||+|+||.||+|.+..+ +..||+|++.+......   .....+.+|+.+|..+ .||||++++++|.+.+
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKST-GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRT   88 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCC-CCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCC
Confidence            45699999999999999999999988 99999999986543111   1346789999999999 9999999999999988


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        89 ~~~l   92 (361)
T 2yab_A           89 DVVL   92 (361)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7774

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.32  E-value=1.4e-12  Score=102.42  Aligned_cols=85  Identities=67%  Similarity=1.112  Sum_probs=69.6

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.+++|+++++||+|+||.||+|.+..+ +..||+|++.+...........+.+|..++..+..||||+.++++|.+
T Consensus        14 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~   92 (353)
T 2i0e_A           14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT   92 (353)
T ss_dssp             -----CTTEEEEEEEEEETTEEEEEEEETTE-EEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC
T ss_pred             cCCCchHHcEEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc
Confidence            4467789999999999999999999999988 899999999875433344567788999999876589999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        93 ~~~~~l   98 (353)
T 2i0e_A           93 MDRLYF   98 (353)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            888875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.32  E-value=3.2e-12  Score=97.12  Aligned_cols=77  Identities=25%  Similarity=0.399  Sum_probs=65.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++++.||+|+||.||++.+ .+ +..+|+|.+..... .......+.+|+.++..+ .||||+++++++...+.+|
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~-~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   76 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NY-GETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLV   76 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TT-SCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CC-CCEEEEEEEecccc-ccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEE
Confidence            46899999999999999999998 56 88999999875432 233456788999999999 9999999999999887776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        77 l   77 (288)
T 1ob3_A           77 L   77 (288)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.32  E-value=3.8e-12  Score=97.65  Aligned_cols=78  Identities=22%  Similarity=0.368  Sum_probs=68.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|.++++||+|+||.||++.+..+ +..+|+|.+...   .......+.+|+.++..+ .||||++++++|.+.+.
T Consensus         7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~-~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   81 (310)
T 3s95_A            7 FRPSDLIHGEVLGKGCFGQAIKVTHRET-GEVMVMKELIRF---DEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKR   81 (310)
T ss_dssp             ECGGGEEEEEEEECCSSEEEEEEEETTT-CCEEEEEEESCC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTE
T ss_pred             eChhHeeccceecCCCCEEEEEEEECCC-CcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCe
Confidence            4467899999999999999999999988 999999988543   345667899999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        82 ~~l   84 (310)
T 3s95_A           82 LNF   84 (310)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.32  E-value=3.2e-12  Score=106.30  Aligned_cols=82  Identities=30%  Similarity=0.474  Sum_probs=71.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|+++++||+|+||.||+|.+..+ +..||+|++.+...........+.+|+.+|..+ .|||||+++++|.+.+
T Consensus       180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~t-g~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~  257 (576)
T 2acx_A          180 PVTKNTFRQYRVLGKGGFGEVCACQVRAT-GKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKD  257 (576)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             CccccceEEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCC
Confidence            35678899999999999999999999988 999999999865443344556789999999999 9999999999999988


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       258 ~l~l  261 (576)
T 2acx_A          258 ALCL  261 (576)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8775

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.32  E-value=3.6e-12  Score=105.46  Aligned_cols=83  Identities=30%  Similarity=0.515  Sum_probs=72.0

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|.++++||+|+||.||+|.+..+ ++.||+|++.+...........+.+|+.++..+ .||||+.++++|.+.
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~t-g~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~  257 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKAT-GKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETK  257 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCC-CcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeC
Confidence            346678999999999999999999999988 999999999865443334556789999999999 999999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      ..+||
T Consensus       258 ~~l~l  262 (543)
T 3c4z_A          258 TDLCL  262 (543)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            88775

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.31  E-value=8.7e-12  Score=95.51  Aligned_cols=78  Identities=26%  Similarity=0.400  Sum_probs=66.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|...+.+|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDT-GQIVAIKKFLESED-DPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLH   78 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECCCCC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCC-CcEEEEEEeecccc-chHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEE
Confidence            46899999999999999999999988 99999998865432 334456788999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        79 l   79 (311)
T 4agu_A           79 L   79 (311)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.31  E-value=4.7e-12  Score=97.50  Aligned_cols=82  Identities=17%  Similarity=0.288  Sum_probs=66.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ....-.++|++++.||+|+||.||+|.+. + +..||+|++..... .......+.+|+.++..+ .||||++++++|.+
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   90 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-Q-GRIVALKRIRLDAE-DEGIPSTAIREISLLKEL-HHPNIVSLIDVIHS   90 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-T-SCEEEEEEEC-------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECC
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-C-CCEEEEEEEecccc-cchhhHHHHHHHHHHHHc-CCCCEeeeeeEEcc
Confidence            34455688999999999999999999985 6 78999999975432 334456789999999999 99999999999998


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        91 ~~~~~l   96 (311)
T 3niz_A           91 ERCLTL   96 (311)
T ss_dssp             SSCEEE
T ss_pred             CCEEEE
Confidence            877664

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.31  E-value=4.1e-12  Score=95.66  Aligned_cols=84  Identities=29%  Similarity=0.381  Sum_probs=70.5

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|.+++.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+++++++..
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   82 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVIST   82 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCC-CceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEec
Confidence            4566778999999999999999999999988 999999999765332334456789999999999 99999999999998


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        83 ~~~~~l   88 (276)
T 2h6d_A           83 PTDFFM   88 (276)
T ss_dssp             SSEEEE
T ss_pred             CCeEEE
Confidence            887764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.31  E-value=7.6e-12  Score=96.93  Aligned_cols=82  Identities=20%  Similarity=0.295  Sum_probs=69.8

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ....+++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|...
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           20 YFQSMEKYENLGLVGEGSYGMVMKCRNKDT-GRIVAIKKFLESDD-DKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKK   96 (331)
T ss_dssp             CCBCGGGEEEEEEGGGGTTSSEEEEEETTT-CCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEET
T ss_pred             hhhhhhhheeeeEEeecCCEEEEEEEECCC-CceEEEEEEecCCC-chHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecC
Confidence            345578899999999999999999999988 99999999875432 334456788999999999 999999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        97 ~~~~l  101 (331)
T 4aaa_A           97 KRWYL  101 (331)
T ss_dssp             TEEEE
T ss_pred             CEEEE
Confidence            87764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=9.2e-12  Score=96.40  Aligned_cols=75  Identities=27%  Similarity=0.405  Sum_probs=66.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|.+++.||+|+||.||+|.+..+ +..+|+|.+...    ......+.+|+.++..+ .||||++++++|.+.+.+|
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~   77 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSS-KKTYMAKFVKVK----GTDQVLVKKEISILNIA-RHRNILHLHESFESMEELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECCC----THHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCC-CcEEEEEEEecC----cccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEE
Confidence            46899999999999999999999988 999999998743    23455688999999999 9999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        78 l   78 (321)
T 1tki_A           78 M   78 (321)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.30  E-value=4.9e-12  Score=96.51  Aligned_cols=83  Identities=28%  Similarity=0.417  Sum_probs=62.8

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-----------------------cchhhhHHHH
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-----------------------DDDVDCTMTE  150 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-----------------------~~~~~~~~~E  150 (178)
                      ..+.+++|++.+.||+|+||.||+|.+..+ +..||+|++.......                       ....+.+.+|
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   86 (298)
T 2zv2_A            8 DCVQLNQYTLKDEIGKGSYGVVKLAYNEND-NTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE   86 (298)
T ss_dssp             --CEETTEEEEEEEEC--CCEEEEEEETTT-TEEEEEEEEECC-------------------------------CHHHHH
T ss_pred             CceeecceEEEeEEeecCCEEEEEEEECCC-CcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence            345678999999999999999999999988 9999999997653211                       1124578999


Q ss_pred             HHHHHHhcCCCCccccceeEEe--CCeEeC
Q psy1646         151 KRILALAAKHPFLTALHSCFQT--KVKCSF  178 (178)
Q Consensus       151 i~il~~l~~hp~iv~l~~~~~~--~~~~yl  178 (178)
                      +.++..+ .||||+++++++.+  .+.+||
T Consensus        87 ~~~l~~l-~h~~iv~~~~~~~~~~~~~~~l  115 (298)
T 2zv2_A           87 IAILKKL-DHPNVVKLVEVLDDPNEDHLYM  115 (298)
T ss_dssp             HHHHHTC-CCTTBCCEEEEEECSSSSEEEE
T ss_pred             HHHHHhC-CCCCCCeEEEEEEcCCCCEEEE
Confidence            9999999 99999999999986  345553

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.30  E-value=5.3e-12  Score=102.74  Aligned_cols=80  Identities=30%  Similarity=0.431  Sum_probs=70.0

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..++|++.++||+|+||.||+|.+..+ +..||+|++.+...........+.+|+.++..+ .|||||+++++|...+.+
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~  101 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYF  101 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCC-CCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEE
Confidence            346799999999999999999999988 999999999876543445567899999999999 999999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus       102 ~l  103 (484)
T 3nyv_A          102 YL  103 (484)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.30  E-value=5.6e-12  Score=101.92  Aligned_cols=78  Identities=26%  Similarity=0.379  Sum_probs=66.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..+|+|++..... .......+.+|+.++..+ .|||||+++++|.+.+.+|
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~-~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~   86 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLA-GQEYAAMIINTKKL-SARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHY   86 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTT-TEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCC-CcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEE
Confidence            35699999999999999999999989 99999999986643 334466789999999999 9999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        87 l   87 (444)
T 3soa_A           87 L   87 (444)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.30  E-value=2.8e-12  Score=104.54  Aligned_cols=78  Identities=28%  Similarity=0.495  Sum_probs=67.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|+++++||+|+||.||+|.+..+ +..||+|++.+... .......+.+|+.+|..+ .|||||++++++.+...+|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~   97 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRIT-QQEYAVKVINKASA-KNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFY   97 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTT-CCEEEEEEEEHHHH-BCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCC-CCEEEEEEEecccc-cchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEE
Confidence            46799999999999999999999988 99999999975432 233457899999999999 9999999999999988777


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        98 l   98 (486)
T 3mwu_A           98 I   98 (486)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.30  E-value=4.4e-12  Score=97.05  Aligned_cols=76  Identities=12%  Similarity=0.193  Sum_probs=66.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..+|++++.||+|+||.||+|.+..+ +..||+|++....   ......+.+|+.++..+ .||||++++++|...+.+|
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   93 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQMNLQQ---QPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELW   93 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTT-CCEEEEEEEEGGG---CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCC-CcEEEEEEeeccc---ccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEE
Confidence            45799999999999999999999888 9999999997552   33456789999999999 9999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        94 l   94 (297)
T 3fxz_A           94 V   94 (297)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.30  E-value=6e-12  Score=97.58  Aligned_cols=84  Identities=39%  Similarity=0.623  Sum_probs=62.2

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      ...+..++|++++.||+|+||.||++.+.   .+ +..||+|++.+.... .......+.+|+.+|..+ .||||+++++
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~   88 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANT-GKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIY   88 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECSSTTT-TCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEE
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCC-CcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeE
Confidence            44567789999999999999999999985   56 889999999765321 123445688999999999 9999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|...+.+||
T Consensus        89 ~~~~~~~~~l   98 (327)
T 3a62_A           89 AFQTGGKLYL   98 (327)
T ss_dssp             EEECSSCEEE
T ss_pred             EEEcCCEEEE
Confidence            9998887774

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.30  E-value=2.9e-12  Score=98.73  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+|.+.++||+|+||.||+|.+  + |..||||++....    ........|+..+..+ +|||||++++++...+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~-g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~   70 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--R-GEEVAVKIFSSRE----ERSWFREAEIYQTVML-RHENILGFIAADNKDN   70 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--T-TEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--C-CEEEEEEEECccc----hhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecC
Confidence            4689999999999999999987  4 7899999987542    1112223455555678 9999999999998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.30  E-value=9.5e-12  Score=97.41  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=67.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ..|.+++.||+|+||.||+|.+..+ +..||+|++.............+.+|+.++..+ .||||++++++|...+.+||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccC-CeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEE
Confidence            4599999999999999999999888 999999999765332334456789999999999 99999999999998887764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.29  E-value=9.9e-12  Score=95.23  Aligned_cols=82  Identities=18%  Similarity=0.199  Sum_probs=68.5

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...+++|++.+.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||++++++|...+
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~  105 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLD-GVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDN  105 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTT-CCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETT
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCC-CceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCC
Confidence            34567899999999999999999999888 999999999764433445567899999999999 9999999999999888


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       106 ~~~l  109 (310)
T 2wqm_A          106 ELNI  109 (310)
T ss_dssp             EEEE
T ss_pred             cEEE
Confidence            7764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.29  E-value=8.6e-12  Score=94.88  Aligned_cols=81  Identities=20%  Similarity=0.284  Sum_probs=70.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...++|.+.+.||+|+||.||++.+..+ +..+|+|++.............+.+|+.++..+ .|+||+++++++...+.
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~   89 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADT-KEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDF   89 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCC-CceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCE
Confidence            3456799999999999999999999988 999999999866443445667899999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        90 ~~l   92 (294)
T 2rku_A           90 VFV   92 (294)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.29  E-value=1.7e-11  Score=92.65  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=68.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++.+.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||+++++++...+.+|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTT-GLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHY   81 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCC-CceEEEEEeecccC-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEE
Confidence            47899999999999999999999988 99999999986543 344457789999999999 9999999999999887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      +
T Consensus        82 ~   82 (284)
T 3kk8_A           82 L   82 (284)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.29  E-value=7.8e-12  Score=102.36  Aligned_cols=80  Identities=24%  Similarity=0.375  Sum_probs=64.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc----------cchhhhHHHHHHHHHHhcCCCCcccc
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ----------DDDVDCTMTEKRILALAAKHPFLTAL  166 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~Ei~il~~l~~hp~iv~l  166 (178)
                      ..++|.++++||+|+||.||+|.+..+ +..+|+|++.+.....          ......+.+|+.+|..+ .|||||++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~  111 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNG-HSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKL  111 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTT-CCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCC-CcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeE
Confidence            346799999999999999999999988 9999999998654321          13456789999999999 99999999


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      +++|.+...+||
T Consensus       112 ~~~~~~~~~~~l  123 (504)
T 3q5i_A          112 FDVFEDKKYFYL  123 (504)
T ss_dssp             EEEEECSSEEEE
T ss_pred             EEEEEcCCEEEE
Confidence            999999888774

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.29  E-value=2.5e-12  Score=99.25  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=53.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++....  .......+.+|+.++..+ .||||++++++|...+.+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   79 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTT-GVYVALKEVKLDS--EEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLT   79 (317)
T ss_dssp             ---------------CEEEEEECSSS-CCEEEEEEEECCS--TTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCC-CcEEEEEEeeccc--ccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEE
Confidence            46799999999999999999999988 9999999997543  233456788999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        80 l   80 (317)
T 2pmi_A           80 L   80 (317)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.28  E-value=5.9e-12  Score=95.33  Aligned_cols=83  Identities=28%  Similarity=0.429  Sum_probs=70.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .....++|++.+.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+++++++...
T Consensus         9 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   86 (284)
T 2vgo_A            9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQN-KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDR   86 (284)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECS
T ss_pred             cchhhhhceeeheecCCCCeEEEEEEEcCC-CcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcC
Confidence            456678999999999999999999999988 899999999765432333456789999999999 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        87 ~~~~l   91 (284)
T 2vgo_A           87 KRIYL   91 (284)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            87764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.28  E-value=5.2e-12  Score=95.29  Aligned_cols=80  Identities=29%  Similarity=0.375  Sum_probs=68.4

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++.+.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+++++++.+.+.+
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   86 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHT-GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYV   86 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccC-CceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeE
Confidence            457899999999999999999999888 999999999765432334457789999999999 999999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        87 ~l   88 (278)
T 3cok_A           87 YL   88 (278)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.28  E-value=1.7e-11  Score=94.98  Aligned_cols=78  Identities=23%  Similarity=0.322  Sum_probs=66.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc---cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ---DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +.|.+.+.||+|+||.||+|.+..+ +..||+|++.......   ......+.+|+.+|..+ .||||++++++|...+.
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTT-CCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCC-CcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCE
Confidence            5699999999999999999999988 9999999997653211   12356789999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        89 ~~l   91 (326)
T 2y0a_A           89 VIL   91 (326)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.28  E-value=8.6e-12  Score=94.95  Aligned_cols=78  Identities=24%  Similarity=0.398  Sum_probs=64.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++++.||+|+||.||++.+..+ +..||+|++..... .......+.+|+.++..+ .||||+++++++...+.+|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLY   78 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEC---------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCC-CceEEEEEeecCcc-chhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceE
Confidence            57899999999999999999999988 99999999875432 233456788999999999 9999999999999988776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        79 l   79 (299)
T 2r3i_A           79 L   79 (299)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.28  E-value=1.6e-12  Score=104.86  Aligned_cols=84  Identities=45%  Similarity=0.850  Sum_probs=61.8

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|+++++||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+.++++|..
T Consensus       142 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~  219 (446)
T 4ejn_A          142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKAT-GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQT  219 (446)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEE
T ss_pred             ccCCChHHcEEeEEEeeCcCEEEEEEEEcCC-CCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEee
Confidence            3456678899999999999999999999988 999999999865433444556788999999999 99999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       220 ~~~~~l  225 (446)
T 4ejn_A          220 HDRLCF  225 (446)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            888774

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.28  E-value=9.9e-12  Score=95.46  Aligned_cols=83  Identities=14%  Similarity=0.229  Sum_probs=68.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ....+++|++.+.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+++++++...
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~  106 (309)
T 2h34_A           29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVR-ERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEID  106 (309)
T ss_dssp             -----CCEEEEEEEEECSSSEEEEEEETTT-TEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEET
T ss_pred             CCcEeccEEEEEEEcCCCCeeEEEEEEcCC-CeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeC
Confidence            344578899999999999999999999988 999999999765432334457899999999999 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       107 ~~~~l  111 (309)
T 2h34_A          107 GQLYV  111 (309)
T ss_dssp             TEEEE
T ss_pred             CeEEE
Confidence            87764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.28  E-value=7.9e-12  Score=96.25  Aligned_cols=73  Identities=27%  Similarity=0.420  Sum_probs=62.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      +++|++++.||+|+||.||+|.+..+ +..||||++....  .....+.+.+|+.+|..+ .|||||+++++|....
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVD-DCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTT-CCEEEEEEEECCS--TTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECC
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCC-CcEEEEEEeecCC--chhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEec
Confidence            35799999999999999999999988 9999999997543  344567899999999999 9999999999986643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.26  E-value=1e-11  Score=101.48  Aligned_cols=77  Identities=25%  Similarity=0.447  Sum_probs=62.5

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|++++.||+|+||.||+|.+..+ +..+|+|++.+... .......+.+|+.++..+ .|||||+++++|.+...+||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l  113 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVT-HVERAIKIIRKTSV-STSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYL  113 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTT-CCEEEEEEEEC------CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCC-CcEEEEEEEecccc-CchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEE
Confidence            4699999999999999999999988 99999999986543 233456789999999999 99999999999999888774

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.26  E-value=1.4e-11  Score=97.20  Aligned_cols=81  Identities=26%  Similarity=0.390  Sum_probs=66.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeC-------CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccc
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRG-------SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALH  167 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~-------~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~  167 (178)
                      .+..++|++++.||+|+||.||+|.+..       . +..||+|++....  .......+.+|+.+|..+..||||++++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~  153 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKE-AVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL  153 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTC-EEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCc-ceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence            4556889999999999999999999753       3 4579999997542  3445678999999999996799999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      ++|...+.+||
T Consensus       154 ~~~~~~~~~~l  164 (370)
T 2psq_A          154 GACTQDGPLYV  164 (370)
T ss_dssp             EEECSSSSCEE
T ss_pred             EEEccCCCEEE
Confidence            99988777664

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.25  E-value=7.6e-12  Score=96.94  Aligned_cols=81  Identities=21%  Similarity=0.311  Sum_probs=66.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCC---eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ..+..++|.+.+.||+|+||.||+|.+..+ +.   .||||++....  .......+.+|+.++..+ .||||++++++|
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~  119 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVP-GQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQF-DHPNIIRLEGVV  119 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCT-TSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecC-CCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEE
Confidence            345678899999999999999999999865 54   59999997542  344567899999999999 999999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+||
T Consensus       120 ~~~~~~~l  127 (325)
T 3kul_A          120 TRGRLAMI  127 (325)
T ss_dssp             CGGGCCEE
T ss_pred             EeCCccEE
Confidence            87766553

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.25  E-value=1.2e-11  Score=98.22  Aligned_cols=76  Identities=24%  Similarity=0.412  Sum_probs=66.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|++++.||+|+||.||+|.+..+ +..+|+|++....   ......+.+|+.+|..+ .||||++++++|.+.+.+|
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~-~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~  124 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKAT-GRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMV  124 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCC-CCEEEEEEecccc---hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEE
Confidence            46799999999999999999999988 9999999997542   23445789999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       125 l  125 (387)
T 1kob_A          125 L  125 (387)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.25  E-value=1.2e-11  Score=95.18  Aligned_cols=81  Identities=25%  Similarity=0.329  Sum_probs=67.1

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|++.+.||+|+||.||++.+  . +..||+|++..... .......+.+|+.++..+ .||||++++++|..
T Consensus        31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~  105 (309)
T 3p86_A           31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--H-GSDVAVKILMEQDF-HAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQ  105 (309)
T ss_dssp             -CBCCGGGEEEEEEEEECSSEEEEEEEE--T-TEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             cccCChhHceeeeEeecCCCeEEEEEEE--C-CCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEE
Confidence            4456678899999999999999999987  4 77899999876543 344556799999999999 99999999999988


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       106 ~~~~~l  111 (309)
T 3p86_A          106 PPNLSI  111 (309)
T ss_dssp             TTCCEE
T ss_pred             CCceEE
Confidence            776653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.25  E-value=1.7e-11  Score=95.22  Aligned_cols=79  Identities=24%  Similarity=0.449  Sum_probs=67.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .++|++++.||+|+||.||++.+..+ +..+|+|++......  .......+.+|+.++..+ .||||++++++|.+.+.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQT-RAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             hhheeecceeeecCCeEEEEEEECCC-CceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCe
Confidence            35699999999999999999999988 999999999754321  234567899999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       103 ~~l  105 (345)
T 3hko_A          103 ICL  105 (345)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.25  E-value=1.2e-11  Score=100.53  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=64.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||||++..... .......+.+|+.+|+.+ .|||||+++++|...
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~  133 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQ  133 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTT-TEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCC-CCEEEEEEECcccc-ChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccC
Confidence            57899999999999999999999999 99999999976432 344567899999999999 999999999999754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.25  E-value=2.2e-11  Score=97.96  Aligned_cols=74  Identities=20%  Similarity=0.301  Sum_probs=64.3

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|+++++||+|+||.||+|.+..+ +..||||++..... .......+.+|+.+|..+ .|+||+++++++...
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNT-EKNVAIKKVNRMFE-DLIDCKRILREITILNRL-KSDYIIRLYDLIIPD   97 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTT-TEEEEEEEECSTTT-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCS
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCC-CcEEEEEEeCchhc-ChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecC
Confidence            357899999999999999999999988 99999999975422 344567899999999999 999999999998765

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.25  E-value=2.5e-11  Score=92.12  Aligned_cols=77  Identities=26%  Similarity=0.381  Sum_probs=67.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|.+.+.||+|+||.||++.+..+ +..+|+|.+....  .......+.+|+.++..+ .||||++++++|.+.+.+|
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   96 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSS-GLERVIKTINKDR--SQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMY   96 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeccCCCeEEEEEEEccC-CceEEEEEeeccc--cchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEE
Confidence            36799999999999999999999988 9999999997653  233457889999999999 9999999999999887776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        97 l   97 (285)
T 3is5_A           97 I   97 (285)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.24  E-value=2.5e-11  Score=93.52  Aligned_cols=74  Identities=19%  Similarity=0.297  Sum_probs=63.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..++|.+.++||+|+||.||+|.+..+ +..||+|++.....  ......+.+|+.++..+ .||||+++++++....
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   80 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKT-GDLFAIKVFNNISF--LRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT   80 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECGGGG--GSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCC-CcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCCcceEEEEeecCC
Confidence            346799999999999999999999988 99999999975432  33456788999999999 9999999999988654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.24  E-value=3.8e-12  Score=98.48  Aligned_cols=77  Identities=19%  Similarity=0.355  Sum_probs=63.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|.+++.||+|+||.||+|.+..+ +..||+|++....  .......+.+|+.++..+ .||||++++++|...+.+|
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLT-DNLVALKEIRLEH--EEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECC--------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCC-CcEEEEEEEeccc--ccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEE
Confidence            46899999999999999999999988 9999999987543  223334566899999999 9999999999999887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        77 l   77 (324)
T 3mtl_A           77 L   77 (324)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.24  E-value=4.5e-11  Score=91.71  Aligned_cols=77  Identities=19%  Similarity=0.277  Sum_probs=65.8

Q ss_pred             CCCeEEE-eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          98 LEDFHFI-KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        98 ~~~~~~~-~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+.|.+. ++||+|+||.||+|.+..+ +..||+|++...   .......+.+|+.++..+..||||++++++|...+.+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~   86 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLIT-SQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF   86 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSS-CCEEEEEEEECC---SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCC-CcEEEEEEEeeC---cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence            4678885 7899999999999999888 999999999764   2344568999999999864799999999999998887


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        87 ~l   88 (316)
T 2ac3_A           87 YL   88 (316)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.23  E-value=1.7e-11  Score=95.96  Aligned_cols=81  Identities=21%  Similarity=0.314  Sum_probs=70.4

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|++++.||+|+||.||++.+..+ +..||+|++....  .......+.+|+.++..+ .||||++++++|...
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSD  103 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEECCC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEET
T ss_pred             cccccccceeeeeecCCCCeEEEEEEECCC-CcEEEEEEecccc--CHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEEC
Confidence            345667899999999999999999999988 9999999997642  344567899999999999 999999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       104 ~~~~l  108 (360)
T 3eqc_A          104 GEISI  108 (360)
T ss_dssp             TEEEE
T ss_pred             CEEEE
Confidence            87764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.23  E-value=2.6e-11  Score=92.43  Aligned_cols=76  Identities=26%  Similarity=0.469  Sum_probs=63.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|++++.||+|+||.||+|.+..+ +..+|+|++...   .......+.+|+.++..+ .||||++++++|...+.+|
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   92 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKET-GALAAAKVIETK---SEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLW   92 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTT-CCEEEEEEEC-------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEE
T ss_pred             ccceeecceeccCCCeEEEEEEEcCC-CcEEEEEEecCC---CHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEE
Confidence            46799999999999999999999988 999999998754   234567889999999999 9999999999998877666


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        93 l   93 (302)
T 2j7t_A           93 I   93 (302)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.23  E-value=1.1e-11  Score=97.93  Aligned_cols=80  Identities=25%  Similarity=0.341  Sum_probs=68.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|.+.+.||+|+||.||+|.+..+ +..||+|++....  .......+.+|+.+|..+ .|||||++++++...+
T Consensus       110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  185 (377)
T 3cbl_A          110 VLNHEDLVLGEQIGRGNFGEVFSGRLRAD-NTLVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQ  185 (377)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTT-CCEEEEEECCTTS--CHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred             EEchHHeEEeeEeccCCCCeEEEEEEecC-CeEEEEEEccccC--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCC
Confidence            45567899999999999999999999988 9999999987542  334456789999999999 9999999999998877


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       186 ~~~l  189 (377)
T 3cbl_A          186 PIYI  189 (377)
T ss_dssp             SCEE
T ss_pred             CcEE
Confidence            6653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.22  E-value=2.9e-11  Score=94.26  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=64.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      -.+++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||+++++++...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   88 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKT-GQKVALKKVLMENE-KEGFPITALREIKILQLL-KHENVVNLIEICRTK   88 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTT-CCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCC-CCEEEEEEEecccc-cccchHHHHHHHHHHHhc-cCCCcccHhheeecc
Confidence            3467899999999999999999999988 99999999865532 334455788999999999 999999999998874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.22  E-value=3.3e-11  Score=94.98  Aligned_cols=74  Identities=19%  Similarity=0.256  Sum_probs=64.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|...+
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~   97 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQK   97 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCC-CceEEEEEeccccC-ChHHHHHHHHHHHHHHhc-CCCCccceEEeecccc
Confidence            57899999999999999999999988 99999999975432 344556789999999999 9999999999987654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.22  E-value=1.7e-11  Score=96.62  Aligned_cols=81  Identities=21%  Similarity=0.215  Sum_probs=65.2

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEE-----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEK-----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~-----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      ..+..++|.+++.||+|+||.||+|..     ..+ +..||+|.+....  .......+.+|+.++..+ .|||||++++
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~~~~  141 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS-PLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIG  141 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----C-CEEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEE
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCc-ceeEEEEeccccc--ChhhHHHHHHHHHHHHhC-CCCCCCeEEE
Confidence            345668899999999999999999994     345 6789999986432  344556789999999999 9999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|.....+||
T Consensus       142 ~~~~~~~~~l  151 (367)
T 3l9p_A          142 VSLQSLPRFI  151 (367)
T ss_dssp             EECSSSSCEE
T ss_pred             EEecCCCCEE
Confidence            9988766553

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.22  E-value=1.7e-11  Score=92.91  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=67.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCC-------CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccc
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD-------EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL  166 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~-------~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l  166 (178)
                      .++..++|.+.+.||+|+||.||+|.+..+ +       ..||+|++...   .....+.+.+|+.++..+ .||||+++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~   77 (289)
T 4fvq_A            3 HKIRNEDLIFNESLGQGTFTKIFKGVRREV-GDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKL-SHKHLVLN   77 (289)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEEEEE-CGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTS-CCTTBCCE
T ss_pred             EEechhHeeeeeeeccCCCceEEEEEEecc-cccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhC-CCCCEeEE
Confidence            345678899999999999999999998876 5       46999998754   344567899999999999 99999999


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      ++++.+.+.+||
T Consensus        78 ~~~~~~~~~~~l   89 (289)
T 4fvq_A           78 YGVCVCGDENIL   89 (289)
T ss_dssp             EEEECCTTCCEE
T ss_pred             EEEEEeCCCCEE
Confidence            999988776553

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.22  E-value=3.9e-11  Score=90.42  Aligned_cols=75  Identities=25%  Similarity=0.394  Sum_probs=65.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+.+.||+|+||.||++.+..+ +..+|+|.+....   ......+.+|+.++..+ .||||++++++|...+.+||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~a~k~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   83 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGT-RIRRAAKKIPKYF---VEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYL   83 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEGGG---CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCC-CcEEEEEeehhhc---cchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEE
Confidence            4699999999999999999999988 8999999997652   23456789999999999 99999999999998887764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.22  E-value=5.9e-11  Score=91.51  Aligned_cols=79  Identities=20%  Similarity=0.265  Sum_probs=66.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc---chhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+.|++++.||+|+||.||++.+..+ +..||+|++........   .....+.+|+.++..+ .||||++++++|...+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKST-GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCC-CeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence            45699999999999999999999988 99999999976532111   1356789999999999 9999999999999888


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        89 ~~~l   92 (321)
T 2a2a_A           89 DVVL   92 (321)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.22  E-value=6.4e-11  Score=89.40  Aligned_cols=78  Identities=26%  Similarity=0.429  Sum_probs=66.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc---chhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ++|++++.||+|+||.||++.+..+ +..+|+|++........   .....+.+|+.++..+ .||||+++++++...+.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGT-GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCC-CCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCe
Confidence            4699999999999999999999988 99999999976543211   2356789999999999 99999999999998877


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        83 ~~l   85 (283)
T 3bhy_A           83 VVL   85 (283)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            664

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.22  E-value=3.3e-11  Score=90.62  Aligned_cols=77  Identities=23%  Similarity=0.311  Sum_probs=66.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||++.+..+ +..||+|++....  .......+.+|+.++..+ .||||+++++++...+.+|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   81 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVT-EEAVAVKIVDMKR--AVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQY   81 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEEGGG--CTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCC-CcEEEEEEeeecc--chhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEE
Confidence            35799999999999999999999988 9999999997543  234457789999999999 9999999999999888766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        82 l   82 (276)
T 2yex_A           82 L   82 (276)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.22  E-value=5.1e-11  Score=91.08  Aligned_cols=75  Identities=25%  Similarity=0.446  Sum_probs=63.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|.+++.||+|+||.||++.+..+ +..||+|++....   ......+.+|+.++..+ .||||++++++|...+.+||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   83 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSP---AFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYL   83 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEECC---------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCC-CCEEEEEEEeccc---ccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEE
Confidence            5699999999999999999999988 9999999998542   23345688999999999 99999999999998887764

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.21  E-value=6e-11  Score=90.55  Aligned_cols=77  Identities=23%  Similarity=0.421  Sum_probs=67.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|++++.||+|+||.||+|.+..+ +..||+|++....  .......+.+|+.++..+ .||||++++++|.....+|
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   96 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRT-QKVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLW   96 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEETTT--CSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCC-CcEEEEEEecccc--cHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEE
Confidence            35699999999999999999999888 9999999997653  234467899999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        97 l   97 (303)
T 3a7i_A           97 I   97 (303)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.21  E-value=2.5e-11  Score=94.95  Aligned_cols=75  Identities=32%  Similarity=0.431  Sum_probs=59.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ..+.|++.+.||+|+||.||+|.+..+ +..||+|++....     ..+.+.+|+.++..+ .||||++++++|...+.+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~  123 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGT-QKPYALKVLKKTV-----DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEI  123 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEC---------------CHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCC-CcEEEEEEeccch-----hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeE
Confidence            346799999999999999999999988 8999999997542     345678999999999 999999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus       124 ~l  125 (349)
T 2w4o_A          124 SL  125 (349)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.21  E-value=3.3e-11  Score=91.27  Aligned_cols=81  Identities=20%  Similarity=0.222  Sum_probs=66.0

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccc----hhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD----DVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~----~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ..+..++|++.+.||+|+||.||+|.+..+ +..||+|++.........    ....+.+|+.++..+ .||||++++++
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~   91 (287)
T 4f0f_A           14 PTLADNEIEYEKQIGKGGFGLVHKGRLVKD-KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGL   91 (287)
T ss_dssp             CBCCSTTEEEEEECCCCSSSCEEEEEETTT-CCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             hhhhhccceehhccccCCceeEEEEEEcCC-ceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhhee
Confidence            345568899999999999999999999988 999999998654321111    126789999999999 99999999999


Q ss_pred             EEeCCeE
Q psy1646         170 FQTKVKC  176 (178)
Q Consensus       170 ~~~~~~~  176 (178)
                      +.+...+
T Consensus        92 ~~~~~~l   98 (287)
T 4f0f_A           92 MHNPPRM   98 (287)
T ss_dssp             ETTTTEE
T ss_pred             ecCCCeE
Confidence            8766544

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.21  E-value=3.3e-11  Score=95.35  Aligned_cols=78  Identities=27%  Similarity=0.367  Sum_probs=57.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC--e
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV--K  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~--~  175 (178)
                      +++|++++.||+|+||.||+|.+..+ +..||+|.+..... .......+.+|+.++..+..||||++++++|...+  .
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRT-GEVVAVKKIFDAFQ-NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTT-CCEEEEEEECC--C-CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCC-CCEEEEEEeccccc-ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            57899999999999999999999989 99999999865422 34456778999999999934999999999998654  4


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      +|
T Consensus        86 ~~   87 (388)
T 3oz6_A           86 VY   87 (388)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.21  E-value=3e-11  Score=91.41  Aligned_cols=80  Identities=24%  Similarity=0.292  Sum_probs=69.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|++.+.||+|+||.||+|.+..+ +..+|+|.+...    ......+.+|+.++..+ .||||+++++++.+
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   80 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTR   80 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGG-TEEEEEEEECSC----STHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCC-CEEEEEEecCcC----HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcc
Confidence            3456678899999999999999999999988 899999998753    33467789999999999 99999999999988


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        81 ~~~~~~   86 (288)
T 3kfa_A           81 EPPFYI   86 (288)
T ss_dssp             SSSEEE
T ss_pred             CCCEEE
Confidence            776653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.21  E-value=8.3e-12  Score=95.92  Aligned_cols=77  Identities=22%  Similarity=0.196  Sum_probs=65.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ...++|++++.||+|+||.||++.+..+ +..||+|++.............+.+|+.++..+ .||||+++++++....
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRD-HRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAET   85 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEE
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCC-CceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccC
Confidence            3457799999999999999999999988 999999999865433444556789999999999 9999999999987643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.21  E-value=4.8e-11  Score=94.30  Aligned_cols=74  Identities=23%  Similarity=0.334  Sum_probs=58.6

Q ss_pred             CeEE--EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         100 DFHF--IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       100 ~~~~--~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .|.+  .+.||+|+||.||+|.+..+ +..||+|++....   ......+.+|+.+|..+ .||||++++++|...+.+|
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~  162 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETAT-GLKLAAKIIKTRG---MKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIV  162 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTT-CCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCC-CcEEEEEEEcccc---cccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE
Confidence            3554  67899999999999999988 9999999998652   34456799999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       163 l  163 (373)
T 2x4f_A          163 L  163 (373)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.21  E-value=3.8e-11  Score=90.47  Aligned_cols=78  Identities=17%  Similarity=0.315  Sum_probs=65.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe--CC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT--KV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~--~~  174 (178)
                      ..++|++++.||+|+||.||++.+..+ +..+|+|.+..... .......+.+|+.++..+ .||||++++++|..  ..
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   80 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSD-GKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNT   80 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGT
T ss_pred             chhheeeehhccCCCCcEEEEEEECCC-CcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCc
Confidence            356899999999999999999999988 99999999986543 344567899999999999 99999999998754  34


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                      .+|
T Consensus        81 ~~~   83 (279)
T 2w5a_A           81 TLY   83 (279)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            444

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.21  E-value=1.4e-11  Score=104.27  Aligned_cols=85  Identities=67%  Similarity=1.112  Sum_probs=70.2

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.+++|+++++||+|+||.||++.+..+ +..||||++.+...........+..|..++..+..||||+.|+++|.+
T Consensus       335 ~~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~-~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~  413 (674)
T 3pfq_A          335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGT-DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT  413 (674)
T ss_dssp             -----CTTEEEEEESSBTTTBCEEEEEESSS-CCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC
T ss_pred             cccccccceEEEEEEccCCCEEEEEEEECCC-CcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe
Confidence            3456789999999999999999999999988 999999999865443445567789999999887689999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus       414 ~~~~~l  419 (674)
T 3pfq_A          414 MDRLYF  419 (674)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            888875

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.21  E-value=1.3e-11  Score=96.05  Aligned_cols=78  Identities=22%  Similarity=0.361  Sum_probs=66.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-----cchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-----DDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++|++++.||+|+||.||++.+..+ +..||+|++.......     ......+.+|+.++..+ .||||++++++|...
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEK-NKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTT-TEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECS
T ss_pred             cceEEEeEEEecCCEEEEEEEECCC-CcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeC
Confidence            5699999999999999999999988 9999999998654321     12455788999999999 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       102 ~~~~l  106 (335)
T 3dls_A          102 GFFQL  106 (335)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            87764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.21  E-value=4.4e-11  Score=95.86  Aligned_cols=75  Identities=25%  Similarity=0.393  Sum_probs=61.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-----ccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-----QDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++|.+.+.||+|+||.||+|.+..+ +..||+|++.+....     .......+.+|+.+|..+ .|||||+++++|..
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~  211 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKT-CKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDA  211 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEES
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCC-CcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEec
Confidence            46799999999999999999999998 999999999865321     122234689999999999 99999999999865


Q ss_pred             CC
Q psy1646         173 KV  174 (178)
Q Consensus       173 ~~  174 (178)
                      .+
T Consensus       212 ~~  213 (419)
T 3i6u_A          212 ED  213 (419)
T ss_dssp             SE
T ss_pred             Cc
Confidence            43

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.21  E-value=5e-11  Score=90.41  Aligned_cols=78  Identities=28%  Similarity=0.495  Sum_probs=67.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||+++++++...+.+|
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~-~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRIT-QQEYAVKVINKASA-KNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCC-CcEEEEEEeccccc-chHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEE
Confidence            35799999999999999999999888 99999999976533 334567899999999999 9999999999999887766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        98 l   98 (287)
T 2wei_A           98 I   98 (287)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.21  E-value=4.5e-11  Score=94.99  Aligned_cols=74  Identities=19%  Similarity=0.297  Sum_probs=63.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..++|.+.++||+|+||.||+|.+..+ +..||+|++.....  ......+.+|+.++..+ .||||+++++++...+
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~   80 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKT-GDLFAIKVFNNISF--LRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETT   80 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECGGGG--GSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTT
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCC-CcEEEEEEeccccc--cchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCC
Confidence            346799999999999999999999988 99999999975432  33456788999999999 9999999999988754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.20  E-value=7.6e-11  Score=91.83  Aligned_cols=79  Identities=18%  Similarity=0.204  Sum_probs=66.1

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCC--CCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH--PFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~h--p~iv~l~~~~~~~  173 (178)
                      +....|++++.||+|+||.||++.+. + +..||+|++..... .......+.+|+.+|..+ .|  +||+.+++++...
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~~~~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-K-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKL-QQHSDKIIRLYDYEITD   81 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-T-SCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHH-TTTCTTBCCEEEEEECS
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-C-CCEEEEEEeecccc-chHHHHHHHHHHHHHHhh-hhcCCceEEEeeeEeeC
Confidence            34567999999999999999999874 6 78999999976543 344557889999999999 66  9999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        82 ~~~~l   86 (343)
T 3dbq_A           82 QYIYM   86 (343)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            87774

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.20  E-value=4.2e-11  Score=93.55  Aligned_cols=73  Identities=18%  Similarity=0.293  Sum_probs=63.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++.+..       ....+|+.++..+..||||++++++|.+.+.+|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~avK~~~~~~-------~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~   92 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKAT-NMEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVY   92 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEETTT-------CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCC-CCEEEEEEEEccc-------CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence            45699999999999999999999988 9999999997652       134578888888867999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        93 l   93 (342)
T 2qr7_A           93 V   93 (342)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.20  E-value=7.9e-11  Score=88.72  Aligned_cols=79  Identities=24%  Similarity=0.344  Sum_probs=67.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+..||||++++++|...+.+|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLD-GCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCC-CceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            35799999999999999999999988 99999999986432 33445678899999988878999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        88 l   88 (289)
T 1x8b_A           88 I   88 (289)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.20  E-value=4.7e-11  Score=92.31  Aligned_cols=74  Identities=19%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|...+.||+|+||.||+|.+..+ |..||||++...   .....+.+.+|+.++..+ .||||++++++|...+.+||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~-g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l  119 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHS-GRQVAVKMMDLR---KQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWV  119 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEETT---TCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCC-CcEEEEEEEecc---chhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEE
Confidence            388889999999999999999888 999999999754   234456789999999999 99999999999998887764

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.19  E-value=7e-11  Score=92.37  Aligned_cols=81  Identities=22%  Similarity=0.331  Sum_probs=68.2

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-----CCCcccc
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-----HPFLTAL  166 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-----hp~iv~l  166 (178)
                      ....+..++|.++++||+|+||.||+|.+..+ +..||+|++...    ......+..|+.++..+ .     |||||++
T Consensus        28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~~~~~~h~~iv~~  101 (360)
T 3llt_A           28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDN-KKYYAVKVVRNI----KKYTRSAKIEADILKKI-QNDDINNNNIVKY  101 (360)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECSC----HHHHHHHHHHHHHHHHT-CCCSTTGGGBCCE
T ss_pred             ecceEecCEEEEEEEEcccCCeEEEEEEECCC-CeEEEEEEeccc----hhhhhhhHHHHHHHHHh-cccCCCCCCeecc
Confidence            34445567899999999999999999999988 999999998743    23455678899999999 5     9999999


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      +++|...+.+||
T Consensus       102 ~~~~~~~~~~~l  113 (360)
T 3llt_A          102 HGKFMYYDHMCL  113 (360)
T ss_dssp             EEEEEETTEEEE
T ss_pred             cceeeECCeeEE
Confidence            999998887764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.19  E-value=5.5e-11  Score=91.73  Aligned_cols=69  Identities=23%  Similarity=0.352  Sum_probs=60.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..++|++++.||+|+||.||+|.+..+ +..||+|++...      ....+.+|+.++..+..||||+++++++..
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~  102 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITN-NEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKD  102 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCC-CcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeecc
Confidence            357799999999999999999999988 999999998643      246789999999999449999999999987

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.19  E-value=3.9e-11  Score=95.64  Aligned_cols=68  Identities=22%  Similarity=0.365  Sum_probs=57.1

Q ss_pred             CCCCCeEEE-eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFI-KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~-~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+++|.+. ++||+|+||.||++.+..+ +..||||++...        ..+.+|+.++..+..||||++++++|..
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~-~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~  126 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRT-QEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN  126 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cccccceeccceeeeccCeEEEEEEECCC-CCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEee
Confidence            446778886 7999999999999999988 999999998632        3467899888665599999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.19  E-value=2.5e-11  Score=94.12  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=66.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|++++.||+|+||.||++.+..     + +..||+|++....  .......+.+|+.++..+ .||||++++++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~  118 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEP-FTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGV  118 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSS-EEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCC-ceeEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEE
Confidence            4556789999999999999999999973     3 4789999997542  334567899999999999 99999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus       119 ~~~~~~~~l  127 (343)
T 1luf_A          119 CAVGKPMCL  127 (343)
T ss_dssp             ECSSSSCEE
T ss_pred             EccCCceEE
Confidence            988776653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.19  E-value=2.6e-11  Score=94.63  Aligned_cols=78  Identities=24%  Similarity=0.322  Sum_probs=63.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|++++.||+|+||.||+|.+.     .+ +..||+|++....  .......+.+|+.++..+..|||||+++++
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~   94 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTAT-CRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA   94 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTC-EEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccccceeeceeecCCCCceEEEEEecccccccc-ceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence            355678999999999999999999854     44 5789999997542  334456799999999999778999999999


Q ss_pred             EEeCCe
Q psy1646         170 FQTKVK  175 (178)
Q Consensus       170 ~~~~~~  175 (178)
                      |...+.
T Consensus        95 ~~~~~~  100 (359)
T 3vhe_A           95 CTKPGG  100 (359)
T ss_dssp             ECSTTS
T ss_pred             eecCCC
Confidence            887543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.18  E-value=8.6e-11  Score=89.34  Aligned_cols=82  Identities=21%  Similarity=0.229  Sum_probs=67.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc------ccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII------QDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~------~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ...++|++.+.||+|+||.||+|.+..+ +..||+|++......      .......+.+|+.++..+..||||++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPT-CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCc-CceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            3467899999999999999999999988 999999999754210      112345788999999999449999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      +...+.+||
T Consensus        93 ~~~~~~~~l  101 (298)
T 1phk_A           93 YETNTFFFL  101 (298)
T ss_dssp             EECSSEEEE
T ss_pred             eccCCeEEE
Confidence            998877764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.18  E-value=2.3e-11  Score=99.49  Aligned_cols=79  Identities=24%  Similarity=0.293  Sum_probs=67.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+...+|.+.+.||+|+||.||+|.+..+ +..||||.+....    ...+.+.+|+.+|..+ .|||||+++++|...
T Consensus       215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~  288 (495)
T 1opk_A          215 WEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTRE  288 (495)
T ss_dssp             CBCCGGGEEEEEESGGGTTSSEEEEEEGGG-TEEEEEEECCSSS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred             cccCHHHceeeeEecCCCCeEEEEEEEcCC-CeEEEEEEecCcc----cchHHHHHHHHHHHhc-CCCCEeeEEEEEecC
Confidence            345667899999999999999999999988 8899999997542    2356799999999999 999999999999887


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus       289 ~~~~l  293 (495)
T 1opk_A          289 PPFYI  293 (495)
T ss_dssp             SSCEE
T ss_pred             CcEEE
Confidence            76654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.18  E-value=4.7e-11  Score=90.21  Aligned_cols=78  Identities=23%  Similarity=0.336  Sum_probs=62.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|++++.||+|+||.||++.+. + +..||+|++.....    ....+.+|+.++..+ .|+||++++++|...
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   91 (283)
T 3gen_A           19 WEIDPKDLTFLKELGTGQFGVVKYGKWR-G-QYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQ   91 (283)
T ss_dssp             TBCCGGGEEEEEECC---CEEEEEEEET-T-TEEEEEEEECTTSB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred             ccCCHHHHHhHhhcCCCCCceEEEEEEc-C-CCeEEEEEecCCCC----CHHHHHHHHHHHhcC-CCCCEeeEEEEEecC
Confidence            3566788999999999999999999876 5 67899999975432    345789999999999 999999999999887


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        92 ~~~~l   96 (283)
T 3gen_A           92 RPIFI   96 (283)
T ss_dssp             SSEEE
T ss_pred             CCeEE
Confidence            76663

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.18  E-value=7.3e-11  Score=89.90  Aligned_cols=77  Identities=25%  Similarity=0.262  Sum_probs=61.3

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      ........|++++.||+|+||.||+|.+    ..+ +..||+|++....  .......+.+|+.++..+ .||||+++++
T Consensus        15 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~   90 (302)
T 4e5w_A           15 PTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKG   90 (302)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSC-SEEEEEEEEC-------CCHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             hhhhhhhhhhhhhccCCCCceEEEEEEEccccCcc-CeEEEEEEecccc--cchhHHHHHHHHHHHHhC-CCCCeeeeee
Confidence            3445566799999999999999999984    456 8899999997543  334457799999999999 9999999999


Q ss_pred             eEEeC
Q psy1646         169 CFQTK  173 (178)
Q Consensus       169 ~~~~~  173 (178)
                      +|...
T Consensus        91 ~~~~~   95 (302)
T 4e5w_A           91 ICTED   95 (302)
T ss_dssp             EEEC-
T ss_pred             EEecC
Confidence            99876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.18  E-value=5.1e-11  Score=93.88  Aligned_cols=75  Identities=20%  Similarity=0.223  Sum_probs=64.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .++|.+.+.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|...+.
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~  115 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRS-GEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASS  115 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSS
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCC-CCEEEEEEeccccc-chhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCC
Confidence            36799999999999999999999988 99999999975432 344567889999999999 99999999999987653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.18  E-value=2.1e-11  Score=92.81  Aligned_cols=74  Identities=24%  Similarity=0.373  Sum_probs=62.3

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ..+..++|++++.||+|+||.||+|.+    ..+ +..||+|++...   .......+.+|+.++..+ .||||++++++
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~   79 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNT-GEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKGV   79 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSC-CEEEEEEEESCC---CHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCC-CcEEEEEEcccC---CHHHHHHHHHHHHHHHhC-CCCCEeeEEEE
Confidence            456678899999999999999999984    456 889999998754   344567899999999999 99999999998


Q ss_pred             EEe
Q psy1646         170 FQT  172 (178)
Q Consensus       170 ~~~  172 (178)
                      |..
T Consensus        80 ~~~   82 (295)
T 3ugc_A           80 CYS   82 (295)
T ss_dssp             ECH
T ss_pred             Eec
Confidence            754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=2.5e-11  Score=94.65  Aligned_cols=80  Identities=23%  Similarity=0.368  Sum_probs=59.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..++|++++.||+|+||.||+|.+..+ +..||+|++......  .......+.+|+.++..+ .||||++++++|...+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNT-NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSC-CSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTT
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCC-CcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCC
Confidence            357799999999999999999999988 999999998754221  112245788999999999 9999999999998877


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        86 ~~~l   89 (346)
T 1ua2_A           86 NISL   89 (346)
T ss_dssp             CCEE
T ss_pred             ceEE
Confidence            6653

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.17  E-value=4.3e-11  Score=94.36  Aligned_cols=73  Identities=25%  Similarity=0.274  Sum_probs=58.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||||++..... .......+.+|+.++..+ .||||++++++|...
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~  100 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPA  100 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTT-TEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCC-CCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecC
Confidence            36899999999999999999999988 99999999865421 334567889999999999 999999999998653

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.17  E-value=3.5e-11  Score=94.78  Aligned_cols=73  Identities=19%  Similarity=0.246  Sum_probs=57.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||||.+..... .......+.+|+.++..+ .||||++++++|...
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~   96 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRT-GAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPD   96 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTT-CCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCC-CCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecC
Confidence            46799999999999999999999988 99999999865422 344567889999999999 999999999998765

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.17  E-value=7.8e-11  Score=91.16  Aligned_cols=75  Identities=16%  Similarity=0.097  Sum_probs=64.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||||++....     ....+.+|+.++..+..||||+.+++++...+.+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYT-NEYVAIKLEPMKS-----RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTT-TEEEEEEEEETTC-----SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCC-CcEEEEEEecccc-----chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence            46799999999999999999999888 9999999987542     23468899999999988999999999999888766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        82 l   82 (330)
T 2izr_A           82 M   82 (330)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.17  E-value=4.8e-11  Score=90.31  Aligned_cols=81  Identities=20%  Similarity=0.263  Sum_probs=60.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|++++.||+|+||.||++.+..+ +..||+|++..... .......+..+..++..+ .||||+++++++...+
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~   79 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPS-GQIMAVKRIRATVN-SQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREG   79 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEC---C-HHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCC-CeEEEEEEeecccC-cHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccC
Confidence            35568899999999999999999999988 99999999875421 122223333444456667 9999999999999887


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        80 ~~~l   83 (290)
T 3fme_A           80 DVWI   83 (290)
T ss_dssp             SEEE
T ss_pred             CEEE
Confidence            7664

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.17  E-value=1.2e-10  Score=89.54  Aligned_cols=81  Identities=20%  Similarity=0.264  Sum_probs=64.8

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...++|+++++||+|+||.||+|.+..+ +..||||++..... ..........|+..+..+..|+||++++++|...+.
T Consensus        54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~  131 (311)
T 3p1a_A           54 FFQQSFQRLSRLGHGSYGEVFKVRSKED-GRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI  131 (311)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTT-SCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             hhhhheeeeheeccCCCeEEEEEEECCC-CeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE
Confidence            3346799999999999999999999988 99999998865422 233445666777666666599999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       132 ~~l  134 (311)
T 3p1a_A          132 LYL  134 (311)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            774

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.17  E-value=8.3e-11  Score=92.31  Aligned_cols=71  Identities=17%  Similarity=0.238  Sum_probs=62.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+|++++.||+|+||.||++.+..+ +..||+|++....  .......+.+|+.++..+ .||||+++++++...
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~   97 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLN-KVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAP   97 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCS
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCC-CeEEEEEEecccc--CcHHHHHHHHHHHHHHhc-CCCCCccceeEEecC
Confidence            5799999999999999999999988 9999999987532  334457889999999999 999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.17  E-value=5.5e-11  Score=89.29  Aligned_cols=76  Identities=18%  Similarity=0.329  Sum_probs=64.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++++.||+|+||.||++.+. . +..||+|++....    ...+.+.+|+.++..+ .||||+++++++.+.+.
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   79 (269)
T 4hcu_A            7 IDPSELTFVQEIGSGQFGLVHLGYWL-N-KDKVAIKTIREGA----MSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAP   79 (269)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-T-TEEEEEEEECTTS----BCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSS
T ss_pred             eChhhceeeheecCCCccEEEEEEec-C-CCeEEEEEecccc----cCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCc
Confidence            45678999999999999999999987 4 6789999997643    2345789999999999 99999999999988776


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        80 ~~l   82 (269)
T 4hcu_A           80 ICL   82 (269)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.16  E-value=4.1e-11  Score=93.13  Aligned_cols=81  Identities=22%  Similarity=0.391  Sum_probs=67.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccch--------------hhhHHHHHHHHHHhcC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD--------------VDCTMTEKRILALAAK  159 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~--------------~~~~~~Ei~il~~l~~  159 (178)
                      .....++|.+++.||+|+||.||+|.+  + +..||+|++..........              ...+.+|+.++..+ .
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~  101 (348)
T 2pml_X           26 KDKYINDYRIIRTLNQGKFNKIILCEK--D-NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-K  101 (348)
T ss_dssp             SCEEETTEEEEEEEECCSSCCEEEEEE--T-TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-C
T ss_pred             cccccCceEEEEEEcCCCCeEEEEEEc--C-CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-C
Confidence            345568999999999999999999998  6 8999999997653321111              17899999999999 9


Q ss_pred             CCCccccceeEEeCCeEeC
Q psy1646         160 HPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       160 hp~iv~l~~~~~~~~~~yl  178 (178)
                      ||||+++++++...+.+||
T Consensus       102 h~~i~~~~~~~~~~~~~~l  120 (348)
T 2pml_X          102 NEYCLTCEGIITNYDEVYI  120 (348)
T ss_dssp             CTTBCCCSEEEESSSEEEE
T ss_pred             CCCcceEEEEEeeCCeEEE
Confidence            9999999999998887764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.16  E-value=9.5e-11  Score=89.80  Aligned_cols=76  Identities=20%  Similarity=0.336  Sum_probs=60.3

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...++|++++.||+|+||.||+|.+..+ +..||+|.+...     .....+.+|+.++..+ .||||+++++++...+.
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~-----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   98 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKET-GQIVAIKQVPVE-----SDLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTD   98 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTT-CCEEEEEEEETT-----SCCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCC-CCEEEEEecCch-----HHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCE
Confidence            3457799999999999999999999988 999999999754     2346789999999999 99999999999998887


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        99 ~~l  101 (314)
T 3com_A           99 LWI  101 (314)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.16  E-value=7.3e-11  Score=90.37  Aligned_cols=69  Identities=20%  Similarity=0.242  Sum_probs=56.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|.+...   .......+.+|+.++..+ .||||+++++++.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   78 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDC-DKRVAIKKIVLT---DPQSVKHALREIKIIRRL-DHDNIVKVFEILG   78 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTT-TEEEEEEEEECC---SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCC-CeEEEEEEEecC---ChHHHHHHHHHHHHHHhc-CCCCeeEEEEecc
Confidence            46799999999999999999999988 999999998754   345567889999999999 9999999998874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.16  E-value=2.5e-11  Score=93.76  Aligned_cols=82  Identities=21%  Similarity=0.206  Sum_probs=63.1

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEE-----EeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccc
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAE-----KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALH  167 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~-----~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~  167 (178)
                      ...+..++|++++.||+|+||.||+|.     ...+ +..||+|.+....  .......+.+|+.++..+ .||||++++
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~   99 (327)
T 2yfx_A           24 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS-PLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCI   99 (327)
T ss_dssp             SCBCCGGGCEEEEECC--CSSCEEEEEC---------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             cccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCc-cceEEEEEecccc--chhhHHHHHHHHHHHhhC-CCCCCCeEE
Confidence            345667889999999999999999998     4456 7899999986432  344556789999999999 999999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      +++...+.+||
T Consensus       100 ~~~~~~~~~~l  110 (327)
T 2yfx_A          100 GVSLQSLPRFI  110 (327)
T ss_dssp             EEECSSSSCEE
T ss_pred             EEEcCCCCcEE
Confidence            99988766553

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.16  E-value=5.6e-11  Score=91.20  Aligned_cols=72  Identities=25%  Similarity=0.362  Sum_probs=60.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..++|++++.||+|+||.||++.+..+ +..||+|++...   .......+.+|+.++..+ .||||+++++++..
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   97 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHD-GHFYALKRILCH---EQQDREEAQREADMHRLF-NHPNILRLVAYCLR   97 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTT-CCEEEEEEEEES---SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCC-CcEEEEEEEecC---CHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEe
Confidence            4456799999999999999999999888 999999998654   345567889999999999 99999999999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.15  E-value=3.6e-11  Score=92.04  Aligned_cols=80  Identities=24%  Similarity=0.330  Sum_probs=66.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|.+.+.||+|+||.||++.+.     .+ +..||+|++....  .......+.+|+.++..+ .||||++++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~   94 (314)
T 2ivs_A           19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAG-YTTVAVKMLKENA--SPSELRDLLSEFNVLKQV-NHPHVIKLYGA   94 (314)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSS-EEEEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred             ccchhheeeeeeecccCCeeEEEEEEeccCcccC-cceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCceeeEEEE
Confidence            455678999999999999999999984     33 5789999987542  344567899999999999 99999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus        95 ~~~~~~~~l  103 (314)
T 2ivs_A           95 CSQDGPLLL  103 (314)
T ss_dssp             ECSSSSCEE
T ss_pred             EecCCceEE
Confidence            988776553

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.15  E-value=1.8e-10  Score=90.99  Aligned_cols=82  Identities=27%  Similarity=0.372  Sum_probs=66.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCC------CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGS------SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~------~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      .+..++|.+++.||+|+||.||+|.+...      .+..||+|++....  .......+.+|+.++..+..|||||++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~  142 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG  142 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence            45567899999999999999999998643      02479999997542  34456789999999999978999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|...+.+||
T Consensus       143 ~~~~~~~~~l  152 (382)
T 3tt0_A          143 ACTQDGPLYV  152 (382)
T ss_dssp             EECSSSSCEE
T ss_pred             eeccCCceEE
Confidence            9988776553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.15  E-value=1.3e-10  Score=89.85  Aligned_cols=81  Identities=27%  Similarity=0.377  Sum_probs=66.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCC-----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE-----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|.+.+.||+|+||.||+|.+..+ +.     .||+|.+....  .......+.+|+.++..+..||||++++++
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGL-GKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTC-SSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCC-CcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            45568899999999999999999998765 43     79999987542  234567799999999999679999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus       119 ~~~~~~~~l  127 (333)
T 2i1m_A          119 CTHGGPVLV  127 (333)
T ss_dssp             ECSSSSCEE
T ss_pred             EecCCceEE
Confidence            988776653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.15  E-value=8.4e-11  Score=90.74  Aligned_cols=82  Identities=16%  Similarity=0.355  Sum_probs=65.6

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHH-HHHHhcCCCCccccceeEE
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR-ILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~~hp~iv~l~~~~~  171 (178)
                      ...+..++|++++.||+|+||.||++.+..+ +..||+|++....  .......+..|+. +++.+ .||||+++++++.
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~   91 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPS-GQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALF   91 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEETTT-TEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEE
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEcCC-CCEEEEEEeeccc--CchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEE
Confidence            3456678999999999999999999999988 9999999997542  2334456677776 55556 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus        92 ~~~~~~l   98 (327)
T 3aln_A           92 REGDCWI   98 (327)
T ss_dssp             CSSEEEE
T ss_pred             eCCceEE
Confidence            8887664

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.15  E-value=1.5e-10  Score=89.52  Aligned_cols=78  Identities=26%  Similarity=0.354  Sum_probs=66.0

Q ss_pred             CCeEEE-eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          99 EDFHFI-KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~~-~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +.|.+. +.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+..||||++++++|...+.+|
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~  105 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKST-GQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII  105 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCC-CCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence            457777 8999999999999999988 99999999976532 33446789999999999966799999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       106 l  106 (327)
T 3lm5_A          106 L  106 (327)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.14  E-value=1.5e-10  Score=91.92  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=65.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-CCCccccceeEEeCCeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-HPFLTALHSCFQTKVKC  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-hp~iv~l~~~~~~~~~~  176 (178)
                      ...|.+++.||+|+||.||++.+. . +..||||++..... .......+.+|+.+|..+.. |+|||++++++...+.+
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~-~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~  131 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNE-K-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  131 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-T-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcC-C-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEE
Confidence            456999999999999999999875 5 78999999986543 34456789999999999932 59999999999988877


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus       132 ~l  133 (390)
T 2zmd_A          132 YM  133 (390)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.14  E-value=1.9e-11  Score=91.57  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=63.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+..++|++.+.||+|+||.||+|.+.   +..+|+|++..... .......+.+|+.++..+ .||||++++++|.+.
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   79 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIF-SHPNVLPVLGACQSP   79 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEET---TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTT
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEEC---CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhc-CCCchhheEEEEccC
Confidence            4567789999999999999999999985   67899999976533 344456799999999999 999999999998876

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.14  E-value=8.6e-11  Score=90.58  Aligned_cols=72  Identities=24%  Similarity=0.350  Sum_probs=61.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +...+|++.++||+|+||.||++.+..+ +..||+|++...   .......+.+|+.++..+..||||+++++++.
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~   96 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGS-GREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS   96 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTT-CCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCC-CcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccc
Confidence            3445799999999999999999999988 999999998654   34455678999999999944999999999884

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.14  E-value=1.1e-10  Score=90.38  Aligned_cols=81  Identities=25%  Similarity=0.363  Sum_probs=65.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-------CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccc
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-------GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALH  167 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-------~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~  167 (178)
                      .+..++|.+++.||+|+||.||+|.+.       .+ +..||+|++....  .......+.+|+.++..+..||||++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~  107 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKE-AVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL  107 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC----CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEecccccccccc-ceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence            345678999999999999999999975       34 6789999997542  3445678999999999997899999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      ++|...+.+||
T Consensus       108 ~~~~~~~~~~l  118 (334)
T 2pvf_A          108 GACTQDGPLYV  118 (334)
T ss_dssp             EEECSSSCCEE
T ss_pred             EEEccCCceEE
Confidence            99988776653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.14  E-value=1.4e-11  Score=93.80  Aligned_cols=82  Identities=18%  Similarity=0.264  Sum_probs=50.4

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..+..++|++++.||+|+||.||++.+..+ +..||+|++....  .......+.+|+.++..+ .||||++++++|..
T Consensus         9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~   84 (303)
T 2vwi_A            9 PWSINRDDYELQEVIGSGATAVVQAAYCAPK-KEKVAIKRINLEK--CQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVV   84 (303)
T ss_dssp             ----CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC------------------CCCCC-CCTTBCCEEEEEES
T ss_pred             ccccchhhhhhhheeccccceEEEEEEECCC-CcEEEEEEEEhhh--cchhHHHHHHHHHHHhhc-CCCCEeeEEEEEee
Confidence            3456678999999999999999999998888 8999999987543  133456788999999999 99999999999988


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        85 ~~~~~l   90 (303)
T 2vwi_A           85 KDELWL   90 (303)
T ss_dssp             SSCEEE
T ss_pred             cCCcEE
Confidence            777664

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.14  E-value=9.1e-11  Score=91.59  Aligned_cols=74  Identities=20%  Similarity=0.225  Sum_probs=63.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|.+.+.||+|+||.||+|.+..+ +..||+|++..... .......+.+|+.++..+ .||||++++++|....
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   96 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRS-GEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPAS   96 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCS
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCC-CCEEEEEEeccccc-chHHHHHHHHHHHHHHhc-CCCCcccHhheEeccc
Confidence            36799999999999999999999988 99999999975432 344567889999999999 9999999999987654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.14  E-value=9e-11  Score=90.65  Aligned_cols=85  Identities=22%  Similarity=0.286  Sum_probs=67.7

Q ss_pred             CCCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeE--EEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          91 GGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVY--AVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        91 ~~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~--aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      .....+..++|++.+.||+|+||.||++.+..+ +..+  |+|.+....  .......+.+|+.++..+..||||+++++
T Consensus        17 ~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   93 (327)
T 1fvr_A           17 TIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLG   93 (327)
T ss_dssp             CCSSBCCGGGCEEEEEEECGGGCEEEEEEEEET-TEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEE
T ss_pred             cccccccHHHccceeeeecCCCceEEEEEEccC-Ccccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhce
Confidence            344557778999999999999999999999877 7755  899887432  34455678999999999877999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      ++...+.+||
T Consensus        94 ~~~~~~~~~l  103 (327)
T 1fvr_A           94 ACEHRGYLYL  103 (327)
T ss_dssp             EEEETTEEEE
T ss_pred             eeeeCCceEE
Confidence            9999888774

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.14  E-value=1.9e-10  Score=89.49  Aligned_cols=72  Identities=24%  Similarity=0.308  Sum_probs=61.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .++|.+.+.||+|+||.||+|.+..+ +..||+|++....  .......+.+|+.++..+ .||||+++++++...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   81 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPT-GEIVAIKKIEPFD--KPLFALRTLREIKILKHF-KHENIITIFNIQRPD   81 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECCCS--SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCS
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCC-CcEEEEEeecccc--cchHHHHHHHHHHHHHhC-cCCCcCCeeeeeccc
Confidence            46899999999999999999999988 9999999996432  334456788999999999 999999999887653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.14  E-value=1.5e-10  Score=87.81  Aligned_cols=72  Identities=17%  Similarity=0.183  Sum_probs=62.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...|.+.+.||+|+||.||+|.+..+ +..||+|.+..... .......+.+|+.++..+ .||||++++++|..
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~   96 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTET-TVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWES   96 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCC-ceEEEEEEecchhh-CHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecc
Confidence            34599999999999999999999988 99999999986543 344567899999999999 99999999998875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.14  E-value=9e-11  Score=88.04  Aligned_cols=79  Identities=23%  Similarity=0.366  Sum_probs=60.0

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-cchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      +..++|++.+.||+|+||.||++.+.   +..+|+|++....... ....+.+.+|+.++..+ .||||+++++++...+
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEP   79 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEET---TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC-
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEc---CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCC
Confidence            45678999999999999999999975   6789999987542211 23356789999999999 9999999999998877


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        80 ~~~l   83 (271)
T 3dtc_A           80 NLCL   83 (271)
T ss_dssp             -CEE
T ss_pred             ceEE
Confidence            6553

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.13  E-value=1.3e-10  Score=87.17  Aligned_cols=77  Identities=23%  Similarity=0.311  Sum_probs=64.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|++++.||+|+||.||++.+. + +..||+|++....    .....+.+|+.++..+ .||||+++++++...+
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   76 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-G-QYDVAVKMIKEGS----MSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEY   76 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-T-TEEEEEEEECBTT----BCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-C-ceeEEEEEeccCC----CcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence            455678999999999999999999776 4 6689999997543    2345689999999999 9999999999998877


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        77 ~~~l   80 (268)
T 3sxs_A           77 PIYI   80 (268)
T ss_dssp             SEEE
T ss_pred             ceEE
Confidence            6653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.13  E-value=8.3e-11  Score=91.02  Aligned_cols=78  Identities=24%  Similarity=0.277  Sum_probs=57.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCe----EEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV----YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      .+..++|+++++||+|+||.||+|.+..+ +..    +|+|.+....  .......+.+|+.++..+ .||||++++++|
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   86 (327)
T 3poz_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGIC   86 (327)
T ss_dssp             ECCGGGEEEEEEEEEETTEEEEEEEECC-----CCEEEEEEEC---------CHHHHHHHHHHHHHC-CBTTBCCEEEEE
T ss_pred             hcCHHHcccceEEeeCCCeEEEEEEEcCC-CceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEE
Confidence            45567899999999999999999998766 654    4777765432  234557899999999999 999999999999


Q ss_pred             EeCCeE
Q psy1646         171 QTKVKC  176 (178)
Q Consensus       171 ~~~~~~  176 (178)
                      .....+
T Consensus        87 ~~~~~~   92 (327)
T 3poz_A           87 LTSTVQ   92 (327)
T ss_dssp             ESSSEE
T ss_pred             ecCCeE
Confidence            876643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.13  E-value=4.3e-10  Score=86.56  Aligned_cols=72  Identities=18%  Similarity=0.311  Sum_probs=62.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+.|++++.||+|+||.||+|.+..+ +..||+|++....    .....+.+|+.++..+..||||++++++|..
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKT-GQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCC-CCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            3467899999999999999999999888 9999999987542    3346788999999998679999999999987

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.13  E-value=1.7e-10  Score=88.91  Aligned_cols=74  Identities=27%  Similarity=0.411  Sum_probs=59.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-----ccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-----QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++|.+++.||+|+||.||+|.+..+ +..||||++......     .......+.+|+.++..+ .||||+++++++...
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKT-CKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESS
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCC-CcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCC
Confidence            5699999999999999999999988 999999998754321     122345688999999999 999999999998766


Q ss_pred             C
Q psy1646         174 V  174 (178)
Q Consensus       174 ~  174 (178)
                      +
T Consensus        88 ~   88 (322)
T 2ycf_A           88 D   88 (322)
T ss_dssp             S
T ss_pred             c
Confidence            5

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.13  E-value=1.3e-10  Score=89.00  Aligned_cols=80  Identities=18%  Similarity=0.311  Sum_probs=57.5

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHH-HHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK-RILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei-~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...+++|++++.||+|+||.||+|.+..+ +..||+|++.....  .........|+ .++..+ .||||+++++++...
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~   96 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKT-GHVIAVKQMRRSGN--KEENKRILMDLDVVLKSH-DCPYIVQCFGTFITN   96 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTT-CCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECS
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecC-CeEEEEEEeccccc--chHHHHHHHHHHHHHHhc-CCCceeeEEEEEecC
Confidence            45678899999999999999999999988 99999999976532  22223344444 566667 999999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        97 ~~~~l  101 (318)
T 2dyl_A           97 TDVFI  101 (318)
T ss_dssp             SEEEE
T ss_pred             CcEEE
Confidence            87764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.12  E-value=1.1e-10  Score=89.36  Aligned_cols=81  Identities=25%  Similarity=0.304  Sum_probs=66.3

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|.+.+.||+|+||.||++.+.     .+ +..||+|++....  .......+.+|+.++..+..||||++++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   95 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA-AMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTC-EEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccch-hhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence            455678999999999999999999863     34 6789999997542  234457899999999999789999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus        96 ~~~~~~~~l  104 (313)
T 1t46_A           96 CTIGGPTLV  104 (313)
T ss_dssp             ECSSSSCEE
T ss_pred             EecCCCcEE
Confidence            988776553

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.12  E-value=2.3e-11  Score=96.13  Aligned_cols=81  Identities=20%  Similarity=0.299  Sum_probs=66.0

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ..+...+|.+.+.||+|+||.||+|.+.   .. +..||||.+....  .......+.+|+.++..+ .||||+++++++
T Consensus        40 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~  115 (373)
T 2qol_A           40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKK-EISVAIKTLKVGY--TEKQRRDFLGEASIMGQF-DHPNIIRLEGVV  115 (373)
T ss_dssp             CBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSC-BCCEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             hhcCHhhceeeeEEeeCCCeEEEEEEEecCCCC-ceeEEEEEecCcc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEE
Confidence            4456678999999999999999999886   34 6689999997542  344567899999999999 999999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+||
T Consensus       116 ~~~~~~~l  123 (373)
T 2qol_A          116 TKSKPVMI  123 (373)
T ss_dssp             CSSSSCEE
T ss_pred             eeCCceEE
Confidence            88776553

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.12  E-value=3.2e-11  Score=92.01  Aligned_cols=73  Identities=23%  Similarity=0.284  Sum_probs=61.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-cchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-DDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++|++++.||+|+||.||++.+..+ +..+|+|++....... ......+.+|+.++..+ .||||+++++++..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   77 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSET-LCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYN   77 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTT-CCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCC-CcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEc
Confidence            46899999999999999999999888 9999999997643211 23456799999999999 99999999999853

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.12  E-value=1.7e-10  Score=89.33  Aligned_cols=73  Identities=27%  Similarity=0.436  Sum_probs=62.1

Q ss_pred             CCeEEE---eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          99 EDFHFI---KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        99 ~~~~~~---~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ++|++.   +.||+|+||.||+|.+..+ +..||+|++.+.      ....+.+|+.++..+..||||++++++|.+...
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~   80 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKS-NQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH   80 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTT-CCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCC-CCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE
Confidence            456764   7899999999999999988 999999999753      245678999999999449999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        81 ~~l   83 (325)
T 3kn6_A           81 TFL   83 (325)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            774

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.12  E-value=1.2e-10  Score=91.16  Aligned_cols=85  Identities=42%  Similarity=0.740  Sum_probs=68.7

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      ...+.+++|++++.||+|+||.||++.+.   .+ +..||||++.+.... .......+.+|+.++..+..||||+.+++
T Consensus        48 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  126 (355)
T 1vzo_A           48 AEKVGIENFELLKVLGTGAYGKVFLVRKISGHDT-GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY  126 (355)
T ss_dssp             CCCCCGGGEEEEEEEEETTTEEEEEEEECSSTTT-TCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEE
T ss_pred             cccccccceEEEEEeccCCCEEEEEEEEcccCCC-CeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEE
Confidence            34566789999999999999999999985   36 889999998754321 12345667889999999967999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|...+.+||
T Consensus       127 ~~~~~~~~~l  136 (355)
T 1vzo_A          127 AFQTETKLHL  136 (355)
T ss_dssp             EEEETTEEEE
T ss_pred             EEeeCceEEE
Confidence            9998887764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.12  E-value=9.1e-11  Score=92.73  Aligned_cols=68  Identities=26%  Similarity=0.318  Sum_probs=56.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ...+|++++.||+|+||.||+|.+..+ +..||+|.+....       ....+|+.+|+.+ .|||||+++++|...
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~-~~~vAiK~~~~~~-------~~~~~E~~il~~l-~hpnIv~l~~~~~~~   72 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIES-GKRFALKKVLQDP-------RYKNRELDIMKVL-DHVNIIKLVDYFYTT   72 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTT-CCEEEEEEEECCT-------TSCCHHHHHHTTC-CCTTBCCEEEEEEEC
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCC-CCEEEEEEEecCc-------chHHHHHHHHHHc-CCCCccchhheeeec
Confidence            346799999999999999999999988 9999999986542       1223799999999 999999999998543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.12  E-value=1e-10  Score=90.79  Aligned_cols=81  Identities=28%  Similarity=0.390  Sum_probs=63.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|.+++.||+|+||.||+|.+.     .+ +..||+|++....  .......+.+|+.++..+..||||++++++
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGV-SIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSC-EEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCc-ceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            455678999999999999999999974     23 5689999997542  234457899999999999779999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus       118 ~~~~~~~~l  126 (344)
T 1rjb_A          118 CTLSGPIYL  126 (344)
T ss_dssp             ECSSSSCEE
T ss_pred             EeeCCccEE
Confidence            988776653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.11  E-value=9.3e-11  Score=90.28  Aligned_cols=79  Identities=28%  Similarity=0.390  Sum_probs=56.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCC---eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ..+..++|++++.||+|+||.||+|.+..+ +.   .||+|++..... .......+.+|+.++..+ .||||+++++++
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~   94 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQE-DGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEF-DHPHVAKLVGVS   94 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC--------CEEEEEEC-------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEE
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEccc-CCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHC-CCCceehhhcee
Confidence            345567899999999999999999998766 54   799999976533 344567899999999999 999999999998


Q ss_pred             EeCCe
Q psy1646         171 QTKVK  175 (178)
Q Consensus       171 ~~~~~  175 (178)
                      .....
T Consensus        95 ~~~~~   99 (323)
T 3qup_A           95 LRSRA   99 (323)
T ss_dssp             ECC--
T ss_pred             ecccc
Confidence            76543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.11  E-value=1.9e-10  Score=88.02  Aligned_cols=78  Identities=19%  Similarity=0.194  Sum_probs=59.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhc--CCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAA--KHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~  171 (178)
                      +..++|++++.||+|+||.||+|.+..+ +..||+|++......  .......+.+|+.++..+.  .||||++++++|.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHS-GHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTT-CCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCC-CcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            4457899999999999999999999888 999999998753211  1122346778888887772  4999999999998


Q ss_pred             eCC
Q psy1646         172 TKV  174 (178)
Q Consensus       172 ~~~  174 (178)
                      ...
T Consensus        85 ~~~   87 (308)
T 3g33_A           85 TSR   87 (308)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.11  E-value=1.8e-10  Score=89.46  Aligned_cols=81  Identities=20%  Similarity=0.190  Sum_probs=65.4

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCC----CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ..+...+|.+.+.||+|+||.||+|.+..+ +    ..||+|++....  .......+.+|+.++..+ .||||++++++
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~  114 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTS-SGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGV  114 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecC-CCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEE
Confidence            456678899999999999999999998754 3    359999987542  334456789999999999 99999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      +...+.+||
T Consensus       115 ~~~~~~~~l  123 (333)
T 1mqb_A          115 ISKYKPMMI  123 (333)
T ss_dssp             ECSSSSEEE
T ss_pred             EecCCCcEE
Confidence            988776654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.11  E-value=1.3e-10  Score=88.16  Aligned_cols=76  Identities=17%  Similarity=0.154  Sum_probs=62.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|....+||+|+||.||+|.+..+ +..||+|.+...   .......+.+|+.++..+ .||||++++++|...+.+|
T Consensus        21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   95 (295)
T 2clq_A           21 YDENGDRVVLGKGTYGIVYAGRDLSN-QVRIAIKEIPER---DSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIK   95 (295)
T ss_dssp             BCTTSSBCEEEECSSSEEEEEEETTT-CCEEEEEEEECC---CC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             ccCCCCcEEEeecCcEEEEEEEECCC-CeEEEEEEccCC---chHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEE
Confidence            34445555999999999999999988 999999999754   234456789999999999 9999999999999888766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        96 l   96 (295)
T 2clq_A           96 I   96 (295)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.10  E-value=1.9e-10  Score=89.06  Aligned_cols=78  Identities=24%  Similarity=0.277  Sum_probs=62.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeE----EEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVY----AVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~----aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      .+..++|+++++||+|+||.||+|.+..+ +..+    |+|.+....  .......+.+|+.++..+ .||||++++++|
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~   86 (327)
T 3lzb_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGIC   86 (327)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECCT-TCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTC-CBTTBCCCCEEE
T ss_pred             ccCHhHceEEEEeeeCCCeEEEEEEEcCC-CceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEE
Confidence            35568899999999999999999999877 7655    566554321  334567899999999999 999999999999


Q ss_pred             EeCCeE
Q psy1646         171 QTKVKC  176 (178)
Q Consensus       171 ~~~~~~  176 (178)
                      .....+
T Consensus        87 ~~~~~~   92 (327)
T 3lzb_A           87 LTSTVQ   92 (327)
T ss_dssp             ESSSEE
T ss_pred             ecCCce
Confidence            876643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.10  E-value=1.2e-10  Score=89.45  Aligned_cols=82  Identities=16%  Similarity=0.193  Sum_probs=66.2

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccc
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALH  167 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~  167 (178)
                      ...+..++|.+.+.||+|+||.||+|.+.     .+ +..||+|.+....  .......+.+|+.++..+ .||||++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~   94 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEP-ETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLL   94 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEE-EEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEE
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCC-ceEEEEEeccccc--CHHHHHHHHHHHHHHHhc-CCCCEeeeE
Confidence            33455678999999999999999999876     34 6789999987542  234456789999999999 999999999


Q ss_pred             eeEEeCCeEeC
Q psy1646         168 SCFQTKVKCSF  178 (178)
Q Consensus       168 ~~~~~~~~~yl  178 (178)
                      +++...+.+||
T Consensus        95 ~~~~~~~~~~l  105 (322)
T 1p4o_A           95 GVVSQGQPTLV  105 (322)
T ss_dssp             EEECSSSSCEE
T ss_pred             EEEccCCccEE
Confidence            99987766553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.09  E-value=6.8e-11  Score=90.61  Aligned_cols=83  Identities=23%  Similarity=0.291  Sum_probs=57.2

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc---chhhhHHHHHHHHHHhc---CCCCccccc
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILALAA---KHPFLTALH  167 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~---~hp~iv~l~  167 (178)
                      .....++|++++.||+|+||.||+|.+..+ +..||+|++........   .....+.+|+.++..+.   .|+||++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTD-RLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTT-CCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccC-CeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            344567899999999999999999999888 99999999976532111   23446778999998885   699999999


Q ss_pred             eeEEeCCeEe
Q psy1646         168 SCFQTKVKCS  177 (178)
Q Consensus       168 ~~~~~~~~~y  177 (178)
                      ++|...+.+|
T Consensus       105 ~~~~~~~~~~  114 (312)
T 2iwi_A          105 DWFETQEGFM  114 (312)
T ss_dssp             EEC-----CE
T ss_pred             EEEecCCeEE
Confidence            9988766554

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.08  E-value=1.9e-10  Score=88.83  Aligned_cols=73  Identities=25%  Similarity=0.318  Sum_probs=61.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      -+..++|++++.||+|+||.||+|.+    ..+ +..||+|++...   .......+.+|+.++..+ .|+||+.+++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~   93 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNT-GALVAVKQLQHS---GPDQQRDFQREIQILKAL-HSDFIVKYRGVS   93 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSC-SEEEEEEEESSC---CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCc-ceEEEEEEeccC---CHHHHHHHHHHHHHHHhc-CCCceeEEEEEE
Confidence            35567899999999999999999984    456 789999998754   344556799999999999 999999999988


Q ss_pred             Ee
Q psy1646         171 QT  172 (178)
Q Consensus       171 ~~  172 (178)
                      ..
T Consensus        94 ~~   95 (327)
T 3lxl_A           94 YG   95 (327)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.08  E-value=4.2e-10  Score=88.50  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=65.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-----ccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-----QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++|.+.+.||+|+||.||+|.+..+ |..||||++......     .......+.+|+.++..+..||||+.++++|...
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~-g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRAT-GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhcccceEEecCCCEEEEEEEECCC-CcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            5699999999999999999999888 999999998754210     0122456889999999986799999999999988


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      ..+||
T Consensus       173 ~~~~l  177 (365)
T 2y7j_A          173 SFMFL  177 (365)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            87764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.08  E-value=1.5e-10  Score=87.66  Aligned_cols=80  Identities=31%  Similarity=0.367  Sum_probs=55.9

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCC--eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE--VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~--~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..+..++|++++.||+|+||.||+|.+....+.  .||+|++...........+.+.+|+.++..+ .||||+++++++.
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   91 (291)
T 1u46_A           13 CLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVL   91 (291)
T ss_dssp             EECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred             cccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEc
Confidence            345567899999999999999999987543133  6899998765433345567899999999999 9999999999988


Q ss_pred             eCC
Q psy1646         172 TKV  174 (178)
Q Consensus       172 ~~~  174 (178)
                      ..+
T Consensus        92 ~~~   94 (291)
T 1u46_A           92 TPP   94 (291)
T ss_dssp             SSS
T ss_pred             cCC
Confidence            655

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.08  E-value=2.7e-10  Score=87.84  Aligned_cols=85  Identities=18%  Similarity=0.173  Sum_probs=67.0

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc---chhhhHHHHHHHHHHhc-CCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---DDVDCTMTEKRILALAA-KHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~---~~~~~~~~Ei~il~~l~-~hp~iv~l~~  168 (178)
                      ......++|++++.||+|+||.||+|.+..+ +..||+|++........   .....+.+|+.++..+. .|+||+++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSD-NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTT-TEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCC-CcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            3445567899999999999999999999988 99999999986543221   23356788999999993 2599999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|...+.+|+
T Consensus       116 ~~~~~~~~~l  125 (320)
T 3a99_A          116 WFERPDSFVL  125 (320)
T ss_dssp             EEECSSEEEE
T ss_pred             EEecCCcEEE
Confidence            9998877664

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.08  E-value=2.1e-10  Score=92.69  Aligned_cols=75  Identities=24%  Similarity=0.463  Sum_probs=63.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|++++.||+|+||.||++.+.   +..||||+++..     ...+.+.+|+.+|..+ .|||||++++++...+
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~---~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~  259 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEK  259 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEET---TEEEEEEEESSC-----TTSHHHHHHHHHHHTC-CCTTBCCEEEEEECTT
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEec---CCeEEEEEeCCc-----hHHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCC
Confidence            456788999999999999999999875   678999999753     2456799999999999 9999999999987654


Q ss_pred             -eEeC
Q psy1646         175 -KCSF  178 (178)
Q Consensus       175 -~~yl  178 (178)
                       .+||
T Consensus       260 ~~~~i  264 (450)
T 1k9a_A          260 GGLYI  264 (450)
T ss_dssp             SCEEE
T ss_pred             CceEE
Confidence             4553

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.08  E-value=2e-10  Score=88.78  Aligned_cols=78  Identities=18%  Similarity=0.211  Sum_probs=61.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCe----EEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV----YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~----~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      ..+..++|++++.||+|+||.||+|.+..+ +..    +|+|.+....  .......+.+|+.++..+ .||||++++++
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~   83 (325)
T 3kex_A            8 RIFKETELRKLKVLGSGVFGTVHKGVWIPE-GESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSL-DHAHIVRLLGL   83 (325)
T ss_dssp             CBCCTTTEEEEEEEECCSSCEEEEEEECCT-TCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTC-CCTTBCCEEEE
T ss_pred             hhcCHhHceeeeeeeecCCceEEEEEEcCC-CceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcC-CCCCcCeEEEE
Confidence            345668899999999999999999999877 765    6777664332  233456788999999999 99999999999


Q ss_pred             EEeCCe
Q psy1646         170 FQTKVK  175 (178)
Q Consensus       170 ~~~~~~  175 (178)
                      +.....
T Consensus        84 ~~~~~~   89 (325)
T 3kex_A           84 CPGSSL   89 (325)
T ss_dssp             ECBSSE
T ss_pred             EcCCcc
Confidence            875443

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.07  E-value=2e-10  Score=85.90  Aligned_cols=76  Identities=18%  Similarity=0.353  Sum_probs=63.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++.+.||+|+||.||++.+. . +..||+|++.....    ..+.+.+|+.++..+ .||||+++++++...+.
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~-~-~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   77 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWL-N-KDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAP   77 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-T-TEEEEEEEECTTTB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSS
T ss_pred             EchhheeeeeEecCCCceeEEEEEec-C-CCeEEEEEccccCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCC
Confidence            44578999999999999999999986 5 67899999976432    346789999999999 99999999999988766


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        78 ~~l   80 (267)
T 3t9t_A           78 ICL   80 (267)
T ss_dssp             CEE
T ss_pred             eEE
Confidence            553

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.07  E-value=2.2e-10  Score=86.91  Aligned_cols=68  Identities=26%  Similarity=0.514  Sum_probs=60.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ++|++++.||+|+||.||++.+..+ +..||+|++...    ......+.+|+.++..+ .||||++++++|..
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   73 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALD-SRYYAIKKIRHT----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLE   73 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEEE----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             ccchhhheeccCCcEEEEEEEEcCC-CeEEEEEEEecc----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHh
Confidence            4699999999999999999999888 999999999643    33457789999999999 99999999998865

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.06  E-value=2.4e-10  Score=87.99  Aligned_cols=77  Identities=29%  Similarity=0.339  Sum_probs=61.3

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEe----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKR----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ....|++++.||+|+||.||++...    .+ +..||+|++....  .......+.+|+.++..+ .||||+++++++.+
T Consensus        29 ~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  104 (318)
T 3lxp_A           29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGT-GEMVAVKALKADA--GPQHRSGWKQEIDILRTL-YHEHIIKYKGCCED  104 (318)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECSCC--C-CEEEEEEEECTTC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             cHHHHhhhheecCCCCeEEEEEEEccCCCCC-CcEEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCcchhhEEEEEec
Confidence            3344599999999999999888653    45 7889999997542  344567799999999999 99999999999987


Q ss_pred             C--CeEe
Q psy1646         173 K--VKCS  177 (178)
Q Consensus       173 ~--~~~y  177 (178)
                      .  ..+|
T Consensus       105 ~~~~~~~  111 (318)
T 3lxp_A          105 AGAASLQ  111 (318)
T ss_dssp             TTTTEEE
T ss_pred             CCCceEE
Confidence            4  4444

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.06  E-value=2.2e-10  Score=89.43  Aligned_cols=72  Identities=25%  Similarity=0.400  Sum_probs=50.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..+++|++.+.||+|+||.||+|.+..+ +..||||++...    ........+++..+..+ .||||++++++|...
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~----~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~   91 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKST-GMSVAIKKVIQD----PRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTL   91 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTT-CCEEEEEEEECC----TTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEE
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCC-CCEEEEEEEecC----ccccHHHHHHHHHHHhc-CCCCcccHHHhhhcc
Confidence            4568899999999999999999999988 999999988653    22344677888888899 999999999998653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.06  E-value=7e-10  Score=83.71  Aligned_cols=78  Identities=27%  Similarity=0.343  Sum_probs=62.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCC--CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSS--DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+..++|.+.+.||+|+||.||+|.+....  +..||+|.+....  .......+.+|+.++..+ .||||+++++++..
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   84 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE   84 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC
Confidence            455678999999999999999999876431  3359999987542  234567899999999999 99999999999876


Q ss_pred             CCe
Q psy1646         173 KVK  175 (178)
Q Consensus       173 ~~~  175 (178)
                      ...
T Consensus        85 ~~~   87 (281)
T 3cc6_A           85 EPT   87 (281)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.06  E-value=2.2e-10  Score=88.43  Aligned_cols=76  Identities=24%  Similarity=0.358  Sum_probs=62.3

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEE----eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEK----RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~----~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      +.....++|++++.||+|+||.||++..    ..+ +..||+|++...   .......+.+|+.++..+ .||||+++++
T Consensus        35 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~  109 (326)
T 2w1i_A           35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNT-GEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKG  109 (326)
T ss_dssp             --CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSC-CEEEEEEEESSC---CSHHHHHHHHHHHHHHTC-CCTTBCCEEE
T ss_pred             ccccCHHHceeeeeeccCCCeEEEEEEeccccCCC-ceEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeeEEE
Confidence            3455667899999999999999999984    456 889999998754   344567899999999999 9999999999


Q ss_pred             eEEeC
Q psy1646         169 CFQTK  173 (178)
Q Consensus       169 ~~~~~  173 (178)
                      ++...
T Consensus       110 ~~~~~  114 (326)
T 2w1i_A          110 VCYSA  114 (326)
T ss_dssp             EECC-
T ss_pred             EEEec
Confidence            87654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.05  E-value=1e-10  Score=90.11  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=64.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...++|++.+.||+|+||.||+|.+. + +..||+|.+...   .......+.+|+.++..+ .||||++++++|...+.
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVLR-D-GAKVALKRRTPE---SSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEECT-T-CCEEEEEECCSC---CSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTC
T ss_pred             HHHhccCccceeecCCCeeEEEEEEC-C-CCEEEEEEeccc---ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCe
Confidence            34578999999999999999999964 6 789999988754   334567899999999999 99999999999987776


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus       110 ~~l  112 (321)
T 2qkw_B          110 MIL  112 (321)
T ss_dssp             CEE
T ss_pred             EEE
Confidence            553

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.05  E-value=3.7e-10  Score=85.72  Aligned_cols=72  Identities=25%  Similarity=0.287  Sum_probs=59.2

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCC---eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      .|.+.++||+|+||.||+|.+..+ +.   .+|+|.+....  .....+.+.+|+.++..+ .||||+++++++...+.
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   96 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQ-AQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECS-SSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSS
T ss_pred             EEccCceeccCCCceEEEEEEecC-CCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCC
Confidence            367789999999999999998755 44   79999986532  344567899999999999 99999999999976554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.05  E-value=2.8e-10  Score=89.71  Aligned_cols=71  Identities=24%  Similarity=0.351  Sum_probs=60.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc-------CCCCccccce
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-------KHPFLTALHS  168 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-------~hp~iv~l~~  168 (178)
                      ...++|+++++||+|+||.||+|.+..+ +..||+|++...    ......+.+|+.++..+.       .|+||+++++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~  108 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQG-KKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD  108 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEE
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecCC-CeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeec
Confidence            3457899999999999999999999988 999999999743    334567899999999983       1788999999


Q ss_pred             eEE
Q psy1646         169 CFQ  171 (178)
Q Consensus       169 ~~~  171 (178)
                      +|.
T Consensus       109 ~~~  111 (397)
T 1wak_A          109 DFK  111 (397)
T ss_dssp             EEE
T ss_pred             cee
Confidence            987

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.05  E-value=3.5e-10  Score=85.46  Aligned_cols=77  Identities=18%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCC--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGS--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..+..++|++.+.||+|+||.||+|.+..+  .+..+|+|.+....  .......+.+|+.++..+ .||||+++++++.
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   86 (281)
T 1mp8_A           10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT   86 (281)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCccceEEEEEc
Confidence            456678899999999999999999998643  03469999886532  344567899999999999 9999999999885


Q ss_pred             eC
Q psy1646         172 TK  173 (178)
Q Consensus       172 ~~  173 (178)
                      ..
T Consensus        87 ~~   88 (281)
T 1mp8_A           87 EN   88 (281)
T ss_dssp             SS
T ss_pred             cC
Confidence            43

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.05  E-value=2.6e-10  Score=87.28  Aligned_cols=76  Identities=25%  Similarity=0.329  Sum_probs=62.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEe-----CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKR-----GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~-----~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ...++|.+++.||+|+||.||+|.+.     .+ +..||+|++....  .......+.+|+.++..+..||||++++++|
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTAT-CRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTC-EEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCcccc-ceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            45678999999999999999999864     34 6789999997542  3344567899999999996689999999998


Q ss_pred             EeCC
Q psy1646         171 QTKV  174 (178)
Q Consensus       171 ~~~~  174 (178)
                      ...+
T Consensus       101 ~~~~  104 (316)
T 2xir_A          101 TKPG  104 (316)
T ss_dssp             CCTT
T ss_pred             ecCC
Confidence            7654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.05  E-value=6.7e-11  Score=93.31  Aligned_cols=68  Identities=18%  Similarity=0.091  Sum_probs=55.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHH---HHHHHhcCCCCccccc
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK---RILALAAKHPFLTALH  167 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei---~il~~l~~hp~iv~l~  167 (178)
                      .++|++.+.||+|+||.||+|.+..+ +..||||++...........+.+.+|+   .++..+ .|||||+++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l-~hpniv~~~  142 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQET-GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI-KNQKQAKVH  142 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CC-CCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTC-CSHHHHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECCC-CcEEEEEEEeeccccchHHHHHHHHHHHHHHhcccc-CCHHHHHHH
Confidence            46799999999999999999999888 999999999865433445667899999   455555 899999998

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.05  E-value=1.8e-10  Score=88.89  Aligned_cols=72  Identities=21%  Similarity=0.162  Sum_probs=59.5

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|+++++||+|+||.||+|.+.   +..||+|++...    ........+|+.++..+ .|||||+++++|....
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQLL---NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGT   91 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEET---TEEEEEEEECGG----GHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEEC
T ss_pred             ccchhhchhhheecccCceEEEEEEEC---CCEEEEEEeecC----chHHHHHHHHHHHHhcC-CCCCchhhcceeccCC
Confidence            356678999999999999999999875   679999998654    23344566799999999 9999999999998754

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.05  E-value=1.6e-11  Score=95.26  Aligned_cols=59  Identities=17%  Similarity=0.214  Sum_probs=47.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-----ccchhhhHHHHHHHHHHh
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-----QDDDVDCTMTEKRILALA  157 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~Ei~il~~l  157 (178)
                      +..++|++++.||+|+||.||+|.+  + +..||||++......     .......+.+|+.+|+.+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   80 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--D-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKEL   80 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--T-TEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHH
T ss_pred             cccccchheeeecccCceEEEEEEe--C-CceEEEEEEecCCccccccccchhHHHHHHHHHHHHHH
Confidence            3456799999999999999999998  5 889999999865321     223347789999999999

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.04  E-value=5.5e-10  Score=90.31  Aligned_cols=73  Identities=26%  Similarity=0.389  Sum_probs=61.8

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|++.+.||+|+||.||+|.+. . +..||||.+....    ...+.+.+|+.+|..+ .|||||++++++..
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~~  254 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYN-K-HTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVTK  254 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEET-T-TEEEEEEEECTTS----BCHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEEC-C-ccEEEEEEecCCC----ccHHHHHHHHHHHhhC-CCCCEeeEEEEEeC
Confidence            34566788999999999999999999986 4 5789999997542    3467899999999999 99999999998863

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.04  E-value=3.9e-10  Score=90.37  Aligned_cols=67  Identities=28%  Similarity=0.322  Sum_probs=57.0

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ....|+++++||+|+||.||+|.+..+ +..||||.+....       ....+|+.+|+.+ .|||||+++++|..
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~-~~~vaiK~~~~~~-------~~~~~E~~il~~l-~hpniv~l~~~~~~  118 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDK-------RFKNRELQIMRKL-DHCNIVRLRYFFYS  118 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEECCT-------TSCCHHHHHHHTC-CCTTBCCEEEEEEE
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCC-CcEEEEEEecccc-------hhHHHHHHHHHHc-CCCCccceeeEEec
Confidence            345699999999999999999999988 9999999986532       1234799999999 99999999998854

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.04  E-value=6.2e-10  Score=85.34  Aligned_cols=80  Identities=18%  Similarity=0.194  Sum_probs=65.9

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-CCCccccceeEEeCC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-HPFLTALHSCFQTKV  174 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-hp~iv~l~~~~~~~~  174 (178)
                      +..++|.+++.||+|+||.||++.+. + +..||+|++..... .......+.+|+.++..+.. |+||+++++++...+
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~  101 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNE-K-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ  101 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT-T-CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcC-C-CcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC
Confidence            44567999999999999999999875 5 78899999976533 34456789999999999932 599999999999888


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       102 ~~~l  105 (313)
T 3cek_A          102 YIYM  105 (313)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.04  E-value=8.1e-10  Score=83.82  Aligned_cols=78  Identities=18%  Similarity=0.149  Sum_probs=66.6

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|++++.||+|+||.||+|.+..+ +..||+|++...     .....+.+|+.++..+..|+|++.+++++....
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~-----~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~   79 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLN-NQQVAIKFEPRR-----SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL   79 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEEETTT-TEEEEEEEEECC-----TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT
T ss_pred             cccccceEEEEEEeecCCEEEEEEEECCC-CcEEEEEEeccC-----CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc
Confidence            34457899999999999999999999888 999999998643     234568899999999978999999999998888


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        80 ~~~l   83 (298)
T 1csn_A           80 HNVL   83 (298)
T ss_dssp             EEEE
T ss_pred             eeEE
Confidence            7664

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.03  E-value=3.8e-10  Score=85.69  Aligned_cols=76  Identities=18%  Similarity=0.274  Sum_probs=59.2

Q ss_pred             CCCCCCeEEEe-eeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          95 KVGLEDFHFIK-VLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        95 ~~~~~~~~~~~-~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .+...+|.+.+ .||+|+||.||+|.+.  .. +..||+|++..... .......+.+|+.++..+ .||||+++++++.
T Consensus        12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~   88 (291)
T 1xbb_A           12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKV-VKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICE   88 (291)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSS-EEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred             eecchhhhhccCccccccCeeeEeeeecCCCc-eeeEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEC
Confidence            34456799988 9999999999999653  45 67899999875432 334467899999999999 9999999999985


Q ss_pred             eC
Q psy1646         172 TK  173 (178)
Q Consensus       172 ~~  173 (178)
                      ..
T Consensus        89 ~~   90 (291)
T 1xbb_A           89 AE   90 (291)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.02  E-value=4.7e-10  Score=85.97  Aligned_cols=78  Identities=22%  Similarity=0.270  Sum_probs=59.5

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCC--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGS--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+..++|.+.+.||+|+||.||+|.....  .+..||+|.+..... .......+.+|+.++..+ .||||+++++++..
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~  107 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDF-SHPNVIRLLGVCIE  107 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcC-CCCCeeeeeEEEee
Confidence            45567899999999999999999988753  045899999875532 344457799999999999 99999999999876


Q ss_pred             CC
Q psy1646         173 KV  174 (178)
Q Consensus       173 ~~  174 (178)
                      .+
T Consensus       108 ~~  109 (313)
T 3brb_A          108 MS  109 (313)
T ss_dssp             --
T ss_pred             cc
Confidence            54

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.02  E-value=1.8e-09  Score=90.58  Aligned_cols=76  Identities=25%  Similarity=0.371  Sum_probs=60.1

Q ss_pred             CCCCCeEEEe-eeccCCCeeEEEEEEeCC-CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIK-VLGKGSFGKVMLAEKRGS-SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~-~lG~G~fg~V~~~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +..+.+.+.+ .||+|+||.||+|.++.. .+..||||+++...  .....+.+.+|+.+|..+ .|||||+++++|...
T Consensus       332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~~  408 (613)
T 2ozo_A          332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAE  408 (613)
T ss_dssp             CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEESS
T ss_pred             ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEeccC
Confidence            3445666666 899999999999988632 05579999997542  344567899999999999 999999999998764


Q ss_pred             C
Q psy1646         174 V  174 (178)
Q Consensus       174 ~  174 (178)
                      .
T Consensus       409 ~  409 (613)
T 2ozo_A          409 A  409 (613)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.02  E-value=6e-10  Score=85.67  Aligned_cols=72  Identities=19%  Similarity=0.316  Sum_probs=58.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEe-CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKR-GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQ  171 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~  171 (178)
                      .++|++++.||+|+||.||++.+. .+ +..||+|++..... .......+.+|+.++..+.  .||||++++++|.
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~   84 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNG-GRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT   84 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTT-TEEEEEEEEEEEBC-TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCC-CEEEEEEEeccCcc-cccCCchhhHHHHHHHhhhccCCCCeEeeeeeee
Confidence            367999999999999999999995 56 78999999875432 2333456778888877663  7999999999987

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.02  E-value=9.5e-10  Score=83.29  Aligned_cols=74  Identities=26%  Similarity=0.393  Sum_probs=59.9

Q ss_pred             CCCCCeEEEe-eeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIK-VLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~-~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..++|.+.+ .||+|+||.||+|.+.  .. +..||+|++....  .......+.+|+.++..+ .||||+++++++..
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~   81 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKK-QIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA   81 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---C-CEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCC-cceEEEEecCCcc--chhHHHHHHHHHHHHHhC-CCCCEeEEEEEecC
Confidence            3456688876 9999999999999864  35 6789999997642  345567899999999999 99999999999854


Q ss_pred             C
Q psy1646         173 K  173 (178)
Q Consensus       173 ~  173 (178)
                      .
T Consensus        82 ~   82 (287)
T 1u59_A           82 E   82 (287)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.01  E-value=1e-09  Score=83.67  Aligned_cols=68  Identities=22%  Similarity=0.365  Sum_probs=57.1

Q ss_pred             CCCCCeEEE-eeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFI-KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~-~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+++|.+. ++||+|+||.||++.+..+ +..||+|++...        ..+.+|+.++..+..||||++++++|..
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~   82 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKRT-QEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN   82 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcCC-CcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhh
Confidence            445678887 7899999999999999988 999999998642        3567899988555499999999999876

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.01  E-value=9.7e-10  Score=82.76  Aligned_cols=65  Identities=28%  Similarity=0.486  Sum_probs=57.6

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+|++++.||+|+||.||++.+..+ +..||+|.+....       ..+.+|+.++..+ .||||++++++|..
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~-------~~~~~e~~~l~~l-~h~~i~~~~~~~~~   75 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRID-GKTYVIKRVKYNN-------EKAEREVKALAKL-DHVNIVHYNGCWDG   75 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTT-CCEEEEEEEECCS-------GGGHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcCC-CeEEEEEEecccc-------HHHHHHHHHHHhC-CCCCEEEEeeeEec
Confidence            5699999999999999999999988 9999999987542       3567899999999 99999999998864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.01  E-value=5.7e-10  Score=87.21  Aligned_cols=72  Identities=19%  Similarity=0.235  Sum_probs=58.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--------ccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--------QDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--------~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .++|.+++.||+|+||.||++.+. . +..||+|.+......        .....+.+.+|+.++..+ .||||++++++
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~   97 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDS-E-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDI   97 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECT-T-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEE
T ss_pred             ccceEEeEEeccCCCEEEEEEECC-C-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeee
Confidence            467999999999999999999875 5 789999998643211        112236799999999999 99999999999


Q ss_pred             EEe
Q psy1646         170 FQT  172 (178)
Q Consensus       170 ~~~  172 (178)
                      |..
T Consensus        98 ~~~  100 (362)
T 3pg1_A           98 FVH  100 (362)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            854

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.00  E-value=6.5e-10  Score=91.75  Aligned_cols=72  Identities=22%  Similarity=0.346  Sum_probs=60.8

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+..++|++.+.||+|+||.||+|.+..  +..||||++....    ...+.+.+|+.+|+.+ .|+|||++++++..
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~  333 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT----MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE  333 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETT--TEEEEEEEECTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECC--CceEEEEEeCCCC----CCHHHHHHHHHHHHhC-CCCCEeeEEEEEee
Confidence            44566789999999999999999999874  4579999997543    2346799999999999 99999999998865

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.00  E-value=1.1e-09  Score=88.49  Aligned_cols=72  Identities=22%  Similarity=0.346  Sum_probs=60.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+..++|.+.+.||+|+||.||+|.+..  +..||||++....    ...+.+.+|+.+|..+ .||||+++++++..
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~  250 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT----MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE  250 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECC--CceEEEEEeccCC----CCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC
Confidence            34566789999999999999999999874  4579999997542    2346789999999999 99999999998865

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.00  E-value=1.1e-10  Score=90.00  Aligned_cols=77  Identities=27%  Similarity=0.326  Sum_probs=61.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ...++|.+.+.||+|+||.||+|.+. + +..||+|++.....  ......+.+|+.++..+ .||||++++++|...+.
T Consensus        27 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~  101 (326)
T 3uim_A           27 VASDNFSNKNILGRGGFGKVYKGRLA-D-GTLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTE  101 (326)
T ss_dssp             TTTTSSCSTTEEECCSSSEEEEECCS-S-SCCEEEEECCC-------CCCHHHHHHHGGGTC-CCTTBCCCCEEECCSSC
T ss_pred             HHhhccccceeEecCCCcEEEEEEec-C-CCEEEEEEeccccC--chHHHHHHHHHHHHHhc-cCCCccceEEEEecCCc
Confidence            45678999999999999999999854 5 78999999875432  22334689999999999 99999999999988766


Q ss_pred             Ee
Q psy1646         176 CS  177 (178)
Q Consensus       176 ~y  177 (178)
                      +|
T Consensus       102 ~~  103 (326)
T 3uim_A          102 RL  103 (326)
T ss_dssp             CE
T ss_pred             eE
Confidence            55

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.00  E-value=3.7e-10  Score=89.88  Aligned_cols=71  Identities=25%  Similarity=0.369  Sum_probs=52.6

Q ss_pred             CeEE-EeeeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe--CC
Q psy1646         100 DFHF-IKVLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT--KV  174 (178)
Q Consensus       100 ~~~~-~~~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~--~~  174 (178)
                      .|++ +++||+|+||.||+|.++  .+ +..||+|++....     ....+.+|+.+|..+ .|||||+++++|..  ..
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~-~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~   93 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKD-DKDYALKQIEGTG-----ISMSACREIALLREL-KHPNVISLQKVFLSHADR   93 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSC-CCCEEEEECSSSS-----CCHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTT
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCC-CeEEEEEEECCCC-----CCHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCC
Confidence            4666 558999999999999976  45 7899999987542     234688999999999 99999999999965  44


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                      .+|
T Consensus        94 ~~~   96 (405)
T 3rgf_A           94 KVW   96 (405)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            555

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.00  E-value=3.4e-10  Score=95.87  Aligned_cols=77  Identities=17%  Similarity=0.280  Sum_probs=64.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeC-CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRG-SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+..++|++++.||+|+||.||++.+.. + +..||||++....  .......+.+|+.++..+ .|||||+++++|...
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~-~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~  151 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVN-GRPVVLKGLVHSG--DAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHT  151 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGGT-TEEEEEEESCSSC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEE
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCCC-CcEEEEEEeCccC--CHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeec
Confidence            3445789999999999999999999975 6 8899999886432  234456789999999999 999999999999875


Q ss_pred             Ce
Q psy1646         174 VK  175 (178)
Q Consensus       174 ~~  175 (178)
                      +.
T Consensus       152 ~~  153 (681)
T 2pzi_A          152 DR  153 (681)
T ss_dssp             CT
T ss_pred             CC
Confidence            54

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.00  E-value=1.1e-09  Score=82.54  Aligned_cols=73  Identities=25%  Similarity=0.348  Sum_probs=60.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+..++|++++.||+|+||.||+|.+. . +..||+|.+....    .....+.+|+.++..+ .||||+++++++....
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   81 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYN-G-HTKVAVKSLKQGS----MSPDAFLAEANLMKQL-QHQRLVRLYAVVTQEP   81 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-T-TEEEEEEEECTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEc-C-CcEEEEEEecCCc----ccHHHHHHHHHHHHhC-CCcCcceEEEEEcCCC
Confidence            445678999999999999999999975 4 6789999987542    2356789999999999 9999999999886543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.99  E-value=6.5e-10  Score=85.23  Aligned_cols=69  Identities=23%  Similarity=0.393  Sum_probs=58.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +..++|++.+.||+|+||.||++.+.   +..||+|.+...     .....+.+|+.++..+ .||||+++++++.+.
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~   73 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESE-----SERKAFIVELRQLSRV-NHPNIVKLYGACLNP   73 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEET---TEEEEEEECSST-----THHHHHHHHHHHHHHC-CCTTBCCEEEBCTTT
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEEC---CeeEEEEEecCh-----hHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCC
Confidence            45678999999999999999999875   678999998643     3456789999999999 999999999987643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.99  E-value=1.5e-09  Score=87.28  Aligned_cols=79  Identities=22%  Similarity=0.266  Sum_probs=65.6

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc-----CCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-----KHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-----~hp~iv~l~~~  169 (178)
                      .....+|+++++||+|+||.||+|.+..+ +..||||++...    ......+.+|+.++..+.     .|+||+.++++
T Consensus        93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~-~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKV-HQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             CEETTTEEEEEEEEESSSEEEEEEEETTT-TEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             CcccCcEEEEEEcccCccEEEEEEEECCC-CcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence            34456799999999999999999999988 999999999753    234567888999998873     56699999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus       168 ~~~~~~~~l  176 (429)
T 3kvw_A          168 FTFRNHICM  176 (429)
T ss_dssp             EEETTEEEE
T ss_pred             cccCCeEEE
Confidence            998887764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.97  E-value=7.9e-10  Score=83.87  Aligned_cols=75  Identities=19%  Similarity=0.202  Sum_probs=60.9

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|.+.+.||+|+||.||++.+.    ..+|+|++..... .......+.+|+.++..+ .||||+.+++++..
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~----~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   91 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA   91 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESS----SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEc----CceEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCcEEEEEeeccC
Confidence            45667788999999999999999999753    3599999875532 345567899999999999 99999999986544


Q ss_pred             C
Q psy1646         173 K  173 (178)
Q Consensus       173 ~  173 (178)
                      .
T Consensus        92 ~   92 (289)
T 3og7_A           92 P   92 (289)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.96  E-value=6.9e-10  Score=83.63  Aligned_cols=70  Identities=26%  Similarity=0.520  Sum_probs=58.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+..++|++++.||+|+||.||++.+.   +..||+|++...     ...+.+.+|+.++..+ .||||+++++++...
T Consensus        17 ~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   86 (278)
T 1byg_A           17 ALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEE   86 (278)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET---TEEEEEEECCCC-----C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC
T ss_pred             cCChhhceEEeEEecCCCceEEEEEEc---CCEEEEEEecch-----hHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcC
Confidence            456788999999999999999999874   679999998743     2456789999999999 999999999987544

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.96  E-value=1.3e-09  Score=85.24  Aligned_cols=72  Identities=21%  Similarity=0.301  Sum_probs=61.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC-----------CCCcc
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK-----------HPFLT  164 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~-----------hp~iv  164 (178)
                      ...++|.+++.||+|+||.||+|.+..+ +..||+|++...    ......+.+|+.++..+ .           |+||+
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~i~   89 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVN-NTHVAMKIVRGD----KVYTEAAEDEIKLLQRV-NDADNTKEDSMGANHIL   89 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECSC----HHHHHHHHHHHHHHHHH-HHTCCSHHHHHHHTTBC
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCC-CcEEEEEEecCC----ccchhhhhHHHHHHHHh-hcccccchhccccchHH
Confidence            4567899999999999999999999988 999999999753    23456788999999988 5           89999


Q ss_pred             ccceeEEeC
Q psy1646         165 ALHSCFQTK  173 (178)
Q Consensus       165 ~l~~~~~~~  173 (178)
                      +++++|...
T Consensus        90 ~~~~~~~~~   98 (373)
T 1q8y_A           90 KLLDHFNHK   98 (373)
T ss_dssp             CCCEEEEEE
T ss_pred             HHHHHhhcc
Confidence            999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.95  E-value=3.4e-09  Score=89.19  Aligned_cols=72  Identities=21%  Similarity=0.298  Sum_probs=57.3

Q ss_pred             CeEE-EeeeccCCCeeEEEEEEe--CCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         100 DFHF-IKVLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       100 ~~~~-~~~lG~G~fg~V~~~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+.+ .+.||+|+||.||+|.+.  .. +..||||+++.... .....+.+.+|+.+|..+ .|||||++++++....
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~-~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~  443 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKV-VKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEAES  443 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSC-EEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEESSS
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCc-ceEEEEEEeccccC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence            3444 358999999999999664  34 57899999976432 344567899999999999 9999999999987654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.94  E-value=2.3e-10  Score=87.81  Aligned_cols=81  Identities=15%  Similarity=0.278  Sum_probs=66.0

Q ss_pred             CCCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          92 GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        92 ~~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ....+..++|++.+.||+|+||.||+|.+..    .+|+|++..... .......+.+|+.++..+ .|+||+++++++.
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~----~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~   99 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG----EVAIRLIDIERD-NEDQLKAFKREVMAYRQT-RHENVVLFMGACM   99 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS----SEEEEECCCCSC-CCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEE
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC----eEEEEEeecCCC-CHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEe
Confidence            3456678899999999999999999998752    499999875432 334456788999999999 9999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus       100 ~~~~~~i  106 (319)
T 2y4i_B          100 SPPHLAI  106 (319)
T ss_dssp             CSSCEEE
T ss_pred             cCCceEE
Confidence            8876664

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.94  E-value=1.1e-09  Score=83.24  Aligned_cols=71  Identities=27%  Similarity=0.280  Sum_probs=56.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCC--CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSS--DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..|++.++||+|+||.||+|.+....  ...+|+|.+....  .......+.+|+.+++.+ .||||+++++++..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~   97 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLR   97 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEc
Confidence            45999999999999999999875330  2358899887532  344567899999999999 99999999998654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.94  E-value=1.9e-09  Score=84.51  Aligned_cols=76  Identities=16%  Similarity=0.199  Sum_probs=60.8

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEE-----EeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcC---CCCcccc
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAE-----KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK---HPFLTAL  166 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~-----~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~---hp~iv~l  166 (178)
                      .+..++|.+.+.||+|+||.||+|.     ...+ +..||+|++...      ....+.+|+.++..+ .   |+||+.+
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~-~~~vavK~~~~~------~~~~~~~e~~~~~~l-~~~~~~~iv~~  132 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKN-KQKFVLKVQKPA------NPWEFYIGTQLMERL-KPSMQHMFMKF  132 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-------C-CCCEEEEEESSC------CHHHHHHHHHHHHHS-CGGGGGGBCCE
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCccccc-CcEEEEEEeCCC------ChhHHHHHHHHHHHh-hhhhhhhhhhh
Confidence            3456779999999999999999994     5667 889999998653      245678888888888 5   8999999


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      ++++...+.+||
T Consensus       133 ~~~~~~~~~~~l  144 (365)
T 3e7e_A          133 YSAHLFQNGSVL  144 (365)
T ss_dssp             EEEEECSSCEEE
T ss_pred             heeeecCCCcEE
Confidence            999998877664

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.94  E-value=2.8e-09  Score=84.14  Aligned_cols=79  Identities=27%  Similarity=0.437  Sum_probs=65.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCC-----Ccccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHP-----FLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp-----~iv~l~~~  169 (178)
                      ....++|++++.||+|+||.||+|.+..+ +..||||++...    ......+.+|+.++..+..|+     +|+.++++
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVE-QEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTT-TEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCC-CcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeee
Confidence            44468899999999999999999999988 999999999743    234567788999998884465     48999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus       125 ~~~~~~~~l  133 (382)
T 2vx3_A          125 FMFRNHLCL  133 (382)
T ss_dssp             EEETTEEEE
T ss_pred             eccCCceEE
Confidence            998887764

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.93  E-value=1.7e-09  Score=83.18  Aligned_cols=79  Identities=20%  Similarity=0.305  Sum_probs=64.3

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEE-eCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCC------cccc
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEK-RGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF------LTAL  166 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~-~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~------iv~l  166 (178)
                      ..+..++|++++.||+|+||.||+|.+ ..+ +..||+|++...    ......+.+|+.++..+ .|++      |+.+
T Consensus         9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~   82 (339)
T 1z57_A            9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAG-GRHVAVKIVKNV----DRYCEAARSEIQVLEHL-NTTDPNSTFRCVQM   82 (339)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTT-TEEEEEEEECSS----HHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCE
T ss_pred             CCCccCceEEEEEEecCCCeEEEEEEecCCC-CcEEEEEEEecC----CchhHHHHHHHHHHHHh-hhcCCCCceeeEee
Confidence            344457899999999999999999998 456 889999998743    23456788999999988 6654      8999


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      +++|...+.+||
T Consensus        83 ~~~~~~~~~~~l   94 (339)
T 1z57_A           83 LEWFEHHGHICI   94 (339)
T ss_dssp             EEEEEETTEEEE
T ss_pred             ecccccCCcEEE
Confidence            999998887764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.93  E-value=3.3e-09  Score=80.53  Aligned_cols=68  Identities=21%  Similarity=0.312  Sum_probs=55.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHH--hcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILAL--AAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~~hp~iv~l~~~~~~  172 (178)
                      ....++|++++.||+|+||.||+|.+  + +..||+|++...      ....+.+|.+++..  + .||||+++++++..
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~   73 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW--Q-GENVAVKIFSSR------DEKSWFRETELYNTVML-RHENILGFIASDMT   73 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE--T-TEEEEEEEECGG------GHHHHHHHHHHHHHTCC-CCTTBCCEEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE--C-CEEEEEEEeccc------cchhhHHHHHHHHHhhc-cCcCeeeEEEeecc
Confidence            34567899999999999999999987  5 789999998643      23556778888877  6 99999999998654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.90  E-value=3.3e-09  Score=83.35  Aligned_cols=68  Identities=15%  Similarity=0.104  Sum_probs=49.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc-CCCCccccc
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-KHPFLTALH  167 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-~hp~iv~l~  167 (178)
                      ..|.+++.||+|+||.||+|.+..+ +..||+|++.............+.+|+.++..|. .||||++++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~  130 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVER-LEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDR  130 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC---------
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCC-CceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhc
Confidence            4599999999999999999999988 9999999998764333455667889988888773 399988755

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=98.90  E-value=1.2e-09  Score=83.45  Aligned_cols=73  Identities=22%  Similarity=0.155  Sum_probs=58.6

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccc-ccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDV-IIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~-~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      |...+.||+|+||.||+|..  . +..+|+|.+.... .........+.+|+.++..+ .||||+++++++...+.+|
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~  106 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--N-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLC  106 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--S-SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE
T ss_pred             cccCCccccCCCeEEEEEEE--C-CceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceE
Confidence            44458999999999999986  4 7799999986532 11234467799999999999 9999999999998776655

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.90  E-value=5.3e-09  Score=81.21  Aligned_cols=67  Identities=22%  Similarity=0.325  Sum_probs=52.4

Q ss_pred             CCCCCeEEEe-eeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHH-HHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIK-VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI-LALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~-~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~i-l~~l~~hp~iv~l~~~~~~  172 (178)
                      ...++|.+++ +||+|+||.||+|.+..+ ++.||+|++...        ....+|+.. +..+ .||||++++++|..
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~--------~~~~~e~~~~~~~~-~h~~i~~~~~~~~~   93 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRT-GQKCALKLLYDS--------PKARQEVDHHWQAS-GGPHIVCILDVYEN   93 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEESS--------HHHHHHHHHHHHHT-TSTTBCCEEEEEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCC-CCEEEEEEecCc--------HHHHHHHHHHHHhc-CCCChHHHHHHHhh
Confidence            3457799965 699999999999999988 999999998643        123344443 4445 99999999999876

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.90  E-value=1e-08  Score=82.40  Aligned_cols=73  Identities=23%  Similarity=0.167  Sum_probs=58.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .+.|...++||+|+||+||.+. ..+ |..||||.+...      ....+.+|+.++..+..|||||++++++.+.+.+|
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~-~~~-g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   85 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQG-SFQ-GRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY   85 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEE-ESS-SSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred             hheeeccCeEeeCCCeEEEEEE-EEC-CeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEE
Confidence            3457778999999999998654 456 899999998653      23467899999987658999999999999888777


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        86 l   86 (434)
T 2rio_A           86 I   86 (434)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.87  E-value=3.8e-09  Score=89.27  Aligned_cols=75  Identities=19%  Similarity=0.255  Sum_probs=60.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCC--CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGS--SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~--~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .+..++|++++.||+|+||.||+|.+..+  .+..+|+|.+....  .....+.+.+|+.++..+ .||||+++++++..
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~  462 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVITE  462 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence            45567899999999999999999998643  03568999876432  344557899999999999 99999999998854

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.87  E-value=2.5e-09  Score=83.26  Aligned_cols=81  Identities=16%  Similarity=0.008  Sum_probs=56.1

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeC---CCCCeEEEEeeeccccc--------ccchhhhHHHHHHHHHHhcCCCCcc
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRG---SSDEVYAVKVLKKDVII--------QDDDVDCTMTEKRILALAAKHPFLT  164 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~---~~~~~~aiK~i~~~~~~--------~~~~~~~~~~Ei~il~~l~~hp~iv  164 (178)
                      ...++|.+++.||+|+||.||+|.+..   + +..+|+|++......        .......+.+|+.++..+ .||||+
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~  111 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEK-DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIP  111 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGG-GCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCc-cceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcc
Confidence            345789999999999999999999986   6 789999998754210        011223467888889989 999999


Q ss_pred             ccceeEEe----CCeEeC
Q psy1646         165 ALHSCFQT----KVKCSF  178 (178)
Q Consensus       165 ~l~~~~~~----~~~~yl  178 (178)
                      ++++++..    ...+||
T Consensus       112 ~~~~~~~~~~~~~~~~~l  129 (345)
T 2v62_A          112 LFYGSGLTEFKGRSYRFM  129 (345)
T ss_dssp             CEEEEEEEESSSCEEEEE
T ss_pred             eeecccccccCCCcEEEE
Confidence            99999887    455553

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.86  E-value=2.6e-10  Score=96.27  Aligned_cols=72  Identities=18%  Similarity=0.259  Sum_probs=58.8

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..++|++.+.||.|+||.||++.+..+ +..||+|++....  .......+.+|+.++..+ .||||+++++++..
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~t-g~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~   83 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDT-GEQVAIKQCRQEL--SPKNRERWCLEIQIMKKL-NHPNVVSAREVPDG   83 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTT-TCCEEECCCCSCC--CHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTT
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCC-CcEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCceeeeecc
Confidence            457899999999999999999999888 9999999987542  344567899999999999 99999999988654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.86  E-value=3.3e-09  Score=84.25  Aligned_cols=68  Identities=32%  Similarity=0.437  Sum_probs=54.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ....+|.++++||+|+||.||+|.+..+ +. +|+|.+....       ....+|+.+|+.+ .|||||+++++|...
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~-~~-~aikk~~~~~-------~~~~~E~~il~~l-~h~niv~l~~~~~~~  104 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVES-DE-VAIKKVLQDK-------RFKNRELQIMRIV-KHPNVVDLKAFFYSN  104 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTT-EE-EEEEEEECCT-------TSCCHHHHHHHTC-CCTTBCCEEEEEEEE
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCC-Ce-EEEEEEecCc-------chHHHHHHHHHhC-CCCCcceEEEEEEec
Confidence            3445799999999999999999998766 54 8888775432       1123799999999 999999999998653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.86  E-value=7.9e-09  Score=79.89  Aligned_cols=67  Identities=19%  Similarity=0.259  Sum_probs=57.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHH--hcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILAL--AAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~--l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|.+.+.||+|+||.||++.+  + +..||+|++...      ....+.+|++++..  + .||||+++++++....
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~------~~~~~~~e~~~~~~~~l-~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--R-GEEVAVKIFSSR------EERSWFREAEIYQTVML-RHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--T-TEEEEEEEECGG------GHHHHHHHHHHHHHSCC-CCTTBCCEEEEEECCC
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--c-CccEEEEEeCch------hHHHHHHHHHHHHHhhc-CCCcEEEEEeeecccC
Confidence            35799999999999999999987  4 789999998643      23567889999988  6 9999999999998765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.85  E-value=1.7e-09  Score=85.47  Aligned_cols=71  Identities=27%  Similarity=0.278  Sum_probs=56.9

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCC--CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..|.+.+.||+|+||.||+|......+  ..+|+|.+....  .......+.+|+.++..+ .||||+++++++..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~  161 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLR  161 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEc
Confidence            348889999999999999998764312  368999886432  345567899999999999 99999999998654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.85  E-value=5.3e-09  Score=81.55  Aligned_cols=58  Identities=14%  Similarity=0.215  Sum_probs=49.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeC--------CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccc
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRG--------SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTA  165 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~--------~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~  165 (178)
                      .++|.+.+.||+|+||.||+|.+..        . +..||+|++...        ..+.+|+.++..+ .||||++
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~-~~~vavK~~~~~--------~~~~~E~~~l~~l-~h~niv~  106 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQ-KQKFSLKLDAKD--------GRLFNEQNFFQRA-AKPLQVN  106 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC------------CEEEEEEETT--------STHHHHHHHHHHH-CCHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCcccccccc-CceEEEEEeccc--------chHHHHHHHHHHh-cccchhh
Confidence            4689999999999999999999886        4 789999998743        4688999999999 9999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.84  E-value=6.1e-09  Score=80.71  Aligned_cols=79  Identities=18%  Similarity=0.229  Sum_probs=64.3

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCC-CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCC------cccc
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD-EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF------LTAL  166 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~-~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~------iv~l  166 (178)
                      ..+..++|++++.||+|+||.||+|.+..+ + ..||+|++...    ......+.+|+.++..+ .|++      ++.+
T Consensus        14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~   87 (355)
T 2eu9_A           14 GDWLQERYEIVGNLGEGTFGKVVECLDHAR-GKSQVALKIIRNV----GKYREAARLEINVLKKI-KEKDKENKFLCVLM   87 (355)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEECSC----HHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCE
T ss_pred             CceecccEEEEEEeeccCCeEEEEEEecCC-CceEEEEEEEccc----ccchhHHHHHHHHHHHH-hhcCCCCceeEEEe
Confidence            344567899999999999999999999877 5 68999999743    23456788999999998 6665      8889


Q ss_pred             ceeEEeCCeEeC
Q psy1646         167 HSCFQTKVKCSF  178 (178)
Q Consensus       167 ~~~~~~~~~~yl  178 (178)
                      +++|...+.+||
T Consensus        88 ~~~~~~~~~~~l   99 (355)
T 2eu9_A           88 SDWFNFHGHMCI   99 (355)
T ss_dssp             EEEEEETTEEEE
T ss_pred             eeeeeeCCeEEE
Confidence            999988887764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.82  E-value=6.1e-09  Score=83.79  Aligned_cols=73  Identities=18%  Similarity=0.166  Sum_probs=58.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ..+|.+.++||+|+||.|+. ....+ ++.||||.+....      ...+.+|+.+|..+..|||||++++++.+...+|
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~-~~~~~-~~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~   94 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVY-RGMFD-NRDVAVKRILPEC------FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQY   94 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEE-EEESS-SSEEEEEEECTTT------EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEE
T ss_pred             cEEEecCCeeecCcCEEEEE-EEEeC-CeEEEEEEECHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEE
Confidence            34599999999999999764 33446 8899999986542      2346789999999857999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        95 l   95 (432)
T 3p23_A           95 I   95 (432)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.81  E-value=1.4e-08  Score=79.50  Aligned_cols=77  Identities=19%  Similarity=0.090  Sum_probs=53.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCC----CCCeEEEEeeeccccc--------ccchhhhHHHHHHHHHHhcCCCCc
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGS----SDEVYAVKVLKKDVII--------QDDDVDCTMTEKRILALAAKHPFL  163 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~----~~~~~aiK~i~~~~~~--------~~~~~~~~~~Ei~il~~l~~hp~i  163 (178)
                      ...++|++++.||+|+||.||+|.+..+    .+..||+|++......        .......+..|+..+..+ .|+||
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~i  110 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGV  110 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCS
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCC
Confidence            4456899999999999999999988753    0478999998754210        000111234455555566 79999


Q ss_pred             cccceeEEeC
Q psy1646         164 TALHSCFQTK  173 (178)
Q Consensus       164 v~l~~~~~~~  173 (178)
                      +++++++...
T Consensus       111 v~~~~~~~~~  120 (364)
T 3op5_A          111 PKYWGSGLHD  120 (364)
T ss_dssp             CCEEEEEEEE
T ss_pred             CeEEeeeeec
Confidence            9999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.80  E-value=2e-08  Score=76.02  Aligned_cols=73  Identities=15%  Similarity=0.129  Sum_probs=58.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE-EeCCeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF-QTKVKC  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~-~~~~~~  176 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++....     ....+.+|+.++..+ .|++++..+..+ ...+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAA-GEEVAIKLECVKT-----KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTT-TEEEEEEEEESCS-----SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCC-CcEEEEEEecCCc-----chhHHHHHHHHHHHh-hcCCCCCccccccCCCCce
Confidence            46799999999999999999999888 9999999987542     234688999999999 888766655554 444444


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus        81 ~   81 (296)
T 3uzp_A           81 V   81 (296)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.80  E-value=1.9e-08  Score=76.03  Aligned_cols=73  Identities=15%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE-EeCCeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF-QTKVKC  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~-~~~~~~  176 (178)
                      .++|++++.||+|+||.||+|.+..+ +..||+|++....     ....+.+|+.++..+ .|++++..+..+ ...+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAA-GEEVAIKLECVKT-----KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTT-TEEEEEEEEEC--------CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCC-CceEEEEeecccc-----cchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCce
Confidence            36799999999999999999999888 9999999876432     234688999999999 777777666555 445554


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus        81 ~   81 (296)
T 4hgt_A           81 V   81 (296)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.79  E-value=1.2e-08  Score=83.29  Aligned_cols=73  Identities=16%  Similarity=0.180  Sum_probs=57.9

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCC-CCccccceeEEeCCeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH-PFLTALHSCFQTKVKC  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~h-p~iv~l~~~~~~~~~~  176 (178)
                      .++|+++++||+|+||.||+|.+..+ +..||||++....     ....+.+|+.++..| .| ++|+.+..++...+.+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~-~~~vAvK~~~~~~-----~~~~~~~E~~il~~L-~~~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQT-NEEVAIKLENVKT-----KHPQLLYESKIYRIL-QGGTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTT-CCEEEEEEEETTC-----SSCCHHHHHHHHHHT-TTSTTCCCEEEEEEETTEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCC-CcEEEEEEecccc-----ccHHHHHHHHHHHHh-cCCCCCCeEEEEEeeCCEE
Confidence            46799999999999999999999988 9999999887542     234688999999999 66 5555565555555555


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus        79 ~   79 (483)
T 3sv0_A           79 V   79 (483)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.73  E-value=1.8e-08  Score=77.79  Aligned_cols=68  Identities=21%  Similarity=0.350  Sum_probs=52.1

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHH--HhcCCCCccccceeEE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA--LAAKHPFLTALHSCFQ  171 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~--~l~~hp~iv~l~~~~~  171 (178)
                      ..+.+++|++++.||+|+||.||+|..  + +..||+|++....      ...+..|.+++.  .+ .|+||+++++.+.
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~   77 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL--D-ERPVAVKVFSFAN------RQNFINEKNIYRVPLM-EHDNIARFIVGDE   77 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE--T-TEEEEEEEEEGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEE
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE--C-CeEEEEEEeeccc------hhhHHHHHHHHHHHhc-cCcchhhheeccc
Confidence            456788999999999999999999976  5 7899999987542      234445555543  46 9999999987554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.69  E-value=2.5e-08  Score=76.84  Aligned_cols=68  Identities=22%  Similarity=0.309  Sum_probs=52.7

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHh-cCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA-AKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~~hp~iv~l~~~~~~~  173 (178)
                      ..++|++++.||+|+||.||+|.+.   +..||+|++...      ....+.+|.+++..+ ..||||+++++++...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC---CceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            3467999999999999999999875   679999998643      123445565555433 1899999999998876

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.45  E-value=5.5e-07  Score=68.38  Aligned_cols=66  Identities=17%  Similarity=0.020  Sum_probs=48.4

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccccc---------------chhhhHHHHHHHHHHhcCCCCccc
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQD---------------DDVDCTMTEKRILALAAKHPFLTA  165 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~---------------~~~~~~~~Ei~il~~l~~hp~iv~  165 (178)
                      |.+++.||+|+||.||+|.+ .+ +..||+|+++.......               .....+.+|+.+|..+ .  | +.
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~-g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l-~--~-~~  165 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EK-FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-Q--G-LA  165 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TT-TEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-T--T-SS
T ss_pred             EEecCEeccCCCceEEEEEe-CC-CCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc-c--C-CC
Confidence            44559999999999999999 77 89999999864321100               1345689999999999 6  5 66


Q ss_pred             cceeEEe
Q psy1646         166 LHSCFQT  172 (178)
Q Consensus       166 l~~~~~~  172 (178)
                      +++++..
T Consensus       166 v~~~~~~  172 (282)
T 1zar_A          166 VPKVYAW  172 (282)
T ss_dssp             SCCEEEE
T ss_pred             cCeEEec
Confidence            6666654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.38  E-value=2.8e-07  Score=73.58  Aligned_cols=61  Identities=16%  Similarity=0.047  Sum_probs=48.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH  160 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~h  160 (178)
                      ...|.+.++||+|+||.||+|.+..+ +..||||++...........+.+.+|+.++..+ .|
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~-g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~  137 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQET-GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RG  137 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TT
T ss_pred             ceeEEEecccccCCCEEEEEEEecCC-CCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-cc
Confidence            34588999999999999999999988 999999998744322334467789999999888 66

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.33  E-value=9.6e-07  Score=72.97  Aligned_cols=72  Identities=19%  Similarity=-0.022  Sum_probs=43.8

Q ss_pred             EEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc-----cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646         102 HFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ-----DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      ...++||+|+||.||++..  . +..+++|.+.......     ....+.+.+|+.+|..+ .||||+.+..++...+++
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~--~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~  414 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY--L-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNK  414 (540)
T ss_dssp             ---------CCEEEEEEEC--S-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTT
T ss_pred             CCCCEEeeCCCEEEEEEEE--C-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCcc
Confidence            4467999999999999943  4 6789999865432211     11245689999999999 999999555554454443


Q ss_pred             e
Q psy1646         177 S  177 (178)
Q Consensus       177 y  177 (178)
                      |
T Consensus       415 ~  415 (540)
T 3en9_A          415 R  415 (540)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.26  E-value=2.6e-06  Score=63.66  Aligned_cols=61  Identities=23%  Similarity=0.105  Sum_probs=45.4

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCe--EEEEeeeccccccc---------------------chhhhHHHHHHHHHHh
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEV--YAVKVLKKDVIIQD---------------------DDVDCTMTEKRILALA  157 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~--~aiK~i~~~~~~~~---------------------~~~~~~~~Ei~il~~l  157 (178)
                      |.+.+.||+|+||.||+|.+..+ |..  ||||+++.......                     .....+.+|+.+|..+
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~-g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFD-GKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCC-CcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            78899999999999999998667 888  99998754321000                     0113678999999999


Q ss_pred             cCCCCc
Q psy1646         158 AKHPFL  163 (178)
Q Consensus       158 ~~hp~i  163 (178)
                       .|+++
T Consensus       128 -~~~~i  132 (258)
T 1zth_A          128 -KEAGV  132 (258)
T ss_dssp             -HHTTC
T ss_pred             -HhCCC
Confidence             77754

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.82  E-value=1.7e-05  Score=65.92  Aligned_cols=76  Identities=12%  Similarity=-0.071  Sum_probs=52.3

Q ss_pred             EEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc-------ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         102 HFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII-------QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~-------~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .....++.|.+|.+..++.... |..+++|++.+....       .+...+.+.+|+++|+++..|+||+++++++++++
T Consensus       237 ~w~~~~~~~~~~~h~~~rr~~f-g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~  315 (569)
T 4azs_A          237 HWQNQPYAGAGLAHKRSRRYFF-GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ  315 (569)
T ss_dssp             EEECC-C--------CCEEEEE-CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS
T ss_pred             hhhhccccCCcccccccccccc-cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC
Confidence            3445667788888877777767 889999999754221       12334579999999999978999999999999999


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus       316 ~~yL  319 (569)
T 4azs_A          316 SGWL  319 (569)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9986

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.66  E-value=2.3e-05  Score=62.19  Aligned_cols=34  Identities=12%  Similarity=0.227  Sum_probs=30.1

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeec
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKK  135 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~  135 (178)
                      -|.+++.||.|+||.||+|.+. . |..||||+++.
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-~-G~~vAvKi~r~  129 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-K-GKQKVLKIHRL  129 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-T-CCEEEEEEECT
T ss_pred             EEEecCEeeeCCceEEEEEECC-C-CCEEEEEEEec
Confidence            3899999999999999999875 6 88999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.75  E-value=0.0066  Score=44.72  Aligned_cols=74  Identities=12%  Similarity=0.005  Sum_probs=56.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +..|.+...++.|+++.||++..  . +..+++|+.....   ......+.+|+.++..+..+..+.+++.++...+..|
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~--~-~~~~vlK~~~~~~---~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG--E-NENLYLKMTDSRY---KGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC--S-SCEEEEEEECGGG---TTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             hccceeEeeccCCCCCeEEEEEC--C-CCcEEEEeCCccc---CCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence            45789999999999999998864  3 6789999886531   1223568999999999955667778888887766554

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=94.09  E-value=0.0029  Score=51.24  Aligned_cols=62  Identities=6%  Similarity=0.057  Sum_probs=16.4

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEE------EeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAV------KVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~ai------K~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .+.||   ||.||++..... ...||+      |.+..... .......+.+|..++..+ .|+|+++.+.+-.
T Consensus       147 ~~~lG---fG~v~~g~~~~~-~~~Vav~~~~~~K~~~~~~~-~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKK-HMPVLKETHDERDSTGQDGV-SEKRLTSLVRRATLKENE-QIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC----------CCBGGGC-------------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhccccccc-CCchhhhhccCccccccccc-cccccccccccccccccc-cccccCCCcceEE
Confidence            34555   999999988755 567888      65543322 233445688899999999 9999999887654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=94.02  E-value=0.32  Score=35.05  Aligned_cols=71  Identities=14%  Similarity=-0.000  Sum_probs=46.7

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCC-ccccceeEEeCCeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPF-LTALHSCFQTKVKC  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~-iv~l~~~~~~~~~~  176 (178)
                      +..|.+..+.+.|.++.||++.. .+ |..+++|+....      ....+.+|+.++..+..+.- +.+++.++...+..
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~-~~-g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~   90 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSA-QG-RPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRD   90 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEEC-TT-SCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE
T ss_pred             cCCCceEecccCCCCceEEEEec-CC-CCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCC
Confidence            44567655545666799999864 35 677999986532      23568899999999844422 44577776655443

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=89.46  E-value=1  Score=34.98  Aligned_cols=54  Identities=15%  Similarity=0.144  Sum_probs=35.1

Q ss_pred             EeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccc-cc---cchhhhHHHHHHHHHHhc
Q psy1646         104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVI-IQ---DDDVDCTMTEKRILALAA  158 (178)
Q Consensus       104 ~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~-~~---~~~~~~~~~Ei~il~~l~  158 (178)
                      .+.||.|.++.||++..... +..+++|......- ..   .....++.+|..++..+.
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~-~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~   92 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEH-DRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQG   92 (397)
T ss_dssp             EEECCSSSSEEEEEEEC-----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHH
T ss_pred             EEECCCCceEEEEEEEECCC-CcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhh
Confidence            56899999999999976555 67899997653210 00   123456788999998873

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=87.56  E-value=3.1  Score=30.73  Aligned_cols=53  Identities=15%  Similarity=-0.016  Sum_probs=39.6

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHh
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA  157 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l  157 (178)
                      ...-+..+|.|..+.||+.... + |+.+.+|+-....   ......+..|...|+.|
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~-D-G~~~~vK~~~~~~---~~~~~~~~~Ea~~L~~L   68 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA-D-GTPLFVKALPDDA---PALDGLFRAEALGLDWL   68 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-T-SCEEEEEECCTTC---CCCTTHHHHHHHHHHHH
T ss_pred             CeEEEEecCCCCCeEEEEEEEC-C-CCEEEEEEeCCCC---cchhhHHHHHHHHHHHH
Confidence            3556788999999999998764 6 7889999765331   22234578899999988

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=86.40  E-value=1.3  Score=33.95  Aligned_cols=66  Identities=8%  Similarity=0.072  Sum_probs=42.1

Q ss_pred             EEEeeeccCCCeeEEEEEEeCCCCCeEEEEeee--cccccccchhhhHHHHHHHHHHhcCC--CCccccceeEEeC
Q psy1646         102 HFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLK--KDVIIQDDDVDCTMTEKRILALAAKH--PFLTALHSCFQTK  173 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~--~~~~~~~~~~~~~~~Ei~il~~l~~h--p~iv~l~~~~~~~  173 (178)
                      ..++.|+.|.++.||+....   +..+++|...  ....  ......+.+|..++..| ..  ..+.+++.++.+.
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~---~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L-~~~~vpvP~~~~~~~~~  110 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTP---GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDAL-AGTDVPVAKMYALCEDE  110 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECS---SCEEEEECCCC------------CHHHHHHHHHHH-TTSSSCCCCEEEEECCT
T ss_pred             ceEEEcCCcccceEEEEEEC---CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHh-hcCCCCCCcEEEECCCC
Confidence            34678899999999988753   4578888765  3321  12245788999999999 53  3466777766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	178
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-21
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-18
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-18
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-16
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-14
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-14
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-13
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-13
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-13
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-13
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-13
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-13
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-13
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-13
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-13
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-12
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-12
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-12
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-12
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-12
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-11
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-11
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-10
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-10
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-09
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-04

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 7e-21
 Identities = 45/76 (59%), Positives = 60/76 (78%), Gaps = 1/76 (1%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +EDF   K+LGKGSFGKV LAE +  +++ +A+K LKKDV++ DDDV+CTM EKR+L+LA
Sbjct: 1   IEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 59

Query: 158 AKHPFLTALHSCFQTK 173
            +HPFLT +   FQTK
Sbjct: 60  WEHPFLTHMFCTFQTK 75

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 1e-18
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           RK   EDF F K+LG+GSF  V+LA +  ++   YA+K+L+K  II+++ V     E+ +
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHIIKENKVPYVTRERDV 61

Query: 154 LALAAKHPFLTALHSCFQTK 173
           ++    HPF   L+  FQ  
Sbjct: 62  MSR-LDHPFFVKLYFTFQDD 80

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 1e-18
 Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 2/84 (2%)

Query: 95  KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           KV + DF ++K+LGKG+FGKV+L  ++ ++   YA+K+L+K+VII  D+V  T+TE R+L
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59

Query: 155 ALAAKHPFLTALHSCFQTKVKCSF 178
               +HPFLTAL   FQT  +  F
Sbjct: 60  QN-TRHPFLTALKYAFQTHDRLCF 82

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 2e-18
 Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 3/87 (3%)

Query: 90  SGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQD-DDVDC 146
           +G   KVG+E+F  +KVLG G++GKV L  K    D  ++YA+KVLKK  I+Q     + 
Sbjct: 15  TGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH 74

Query: 147 TMTEKRILALAAKHPFLTALHSCFQTK 173
           T TE+++L    + PFL  LH  FQT+
Sbjct: 75  TRTERQVLEHIRQSPFLVTLHYAFQTE 101

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.9 bits (186), Expect = 2e-17
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L+DF  ++ LG GSFG+V L   R  +   YA+KVLKK+++++   V+ T  E+ +L++ 
Sbjct: 3   LQDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI- 60

Query: 158 AKHPFLTALHSCFQTK 173
             HPF+  +   FQ  
Sbjct: 61  VTHPFIIRMWGTFQDA 76

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 2e-16
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE--VYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           +G +D   ++ LG GSFG V   E    S +    AVK LK DV+ Q + +D  + E   
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64

Query: 154 LALAAKHPFLTALHSCFQTK 173
           +  +  H  L  L+    T 
Sbjct: 65  MH-SLDHRNLIRLYGVVLTP 83

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.8 bits (175), Expect = 6e-16
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 67  RSPRERAARPYTKTSGGGSGRGSSGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE 126
            S +E       K       +  +       L+ F  IK LG GSFG+VML + +  S  
Sbjct: 9   GSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK-ESGN 67

Query: 127 VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC 176
            YA+K+L K  +++   ++ T+ EKRIL  A   PFL  L   F+     
Sbjct: 68  HYAMKILDKQKVVKLKQIEHTLNEKRILQ-AVNFPFLVKLEFSFKDNSNL 116

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 1e-15
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRI 153
           R+  LEDF   + LGKG FG V LA ++  S  + A+KVL K  + +         E  I
Sbjct: 1   RQWALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEI 59

Query: 154 LALAAKHPFLTALHSCFQTK 173
            +   +HP +  L+  F   
Sbjct: 60  QSH-LRHPNILRLYGYFHDA 78

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.5 bits (172), Expect = 2e-15
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           + DF   +++G+G FG+V    K   + ++YA+K L K  I         + E+ +L+L 
Sbjct: 3   MNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 61

Query: 158 AK--HPFLTALHSCFQTKVKCSF 178
           +    PF+  +   F T  K SF
Sbjct: 62  STGDCPFIVCMSYAFHTPDKLSF 84

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +   ++LG G   +V LA          AVKVL+ D+            E +  A A 
Sbjct: 7   DRYELGEILGFGGMSEVHLARDL-RLHRDVAVKVLRADLARDPSFYLRFRREAQNAA-AL 64

Query: 159 KHPFLTALHSCFQTK 173
            HP + A++   + +
Sbjct: 65  NHPAIVAVYDTGEAE 79

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.3 bits (164), Expect = 2e-14
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + F  ++ +G GSFG V  A     + EV A+K +       ++     + E R L    
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ-KL 72

Query: 159 KHPFLTALHSCFQTK 173
           +HP       C+  +
Sbjct: 73  RHPNTIQYRGCYLRE 87

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 2e-14
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
             D  F  V+G+G+FG+V+ A  +          + +       DD      E  +L   
Sbjct: 9   WNDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 67

Query: 158 AKHPFLTALHSCFQTK 173
             HP +  L    + +
Sbjct: 68  GHHPNIINLLGACEHR 83

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 2e-14
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +DF  I  LG G+ G V     +  S  V A K++  +  I+    +  + E ++L    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLE--IKPAIRNQIIRELQVLH-EC 61

Query: 159 KHPFLTALHSCFQTK 173
             P++   +  F + 
Sbjct: 62  NSPYIVGFYGAFYSD 76

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 3e-14
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           ED+  +  +G GS+G+     ++ S  ++   K L     + + +    ++E  +L    
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGS-MTEAEKQMLVSEVNLLR-EL 60

Query: 159 KHPFLTALHSCFQTKVKCSF 178
           KHP +   +     +   + 
Sbjct: 61  KHPNIVRYYDRIIDRTNTTL 80

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 5e-14
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +D  F+K LG G FG V   + RG      A+K++K+  + +D+     + E +++    
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGSMSEDE----FIEEAKVMM-NL 56

Query: 159 KHPFLTALHSCFQTK 173
            H  L  L+     +
Sbjct: 57  SHEKLVQLYGVCTKQ 71

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 5e-14
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA 155
           + +++   ++ +GKG FG VML + RG      AVK +K D   Q       + E  ++ 
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDYRG---NKVAVKCIKNDATAQA-----FLAEASVMT 55

Query: 156 LAAKHPFLTALHSCF 170
              +H  L  L    
Sbjct: 56  -QLRHSNLVQLLGVI 69

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 7e-14
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
               F K LG G+FGKV+ A   G          AVK+LK        + +  M+E ++L
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVL 80

Query: 155 ALAAKHPFLTALHSCFQTK 173
           +    H  +  L       
Sbjct: 81  SYLGNHMNIVNLLGACTIG 99

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.5 bits (159), Expect = 1e-13
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L+ +   + LG G+FG V    +R ++   +A K +       + D +    E + +++ 
Sbjct: 25  LDHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTP---HESDKETVRKEIQTMSV- 79

Query: 158 AKHPFLTALHSCFQTK 173
            +HP L  LH  F+  
Sbjct: 80  LRHPTLVNLHDAFEDD 95

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 1e-13
 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           E+  F KVLG G+FGKVM A   G S        AVK+LK+       + +  M+E +++
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMM 94

Query: 155 ALAAKHPFLTALHSCFQTK 173
                H  +  L       
Sbjct: 95  TQLGSHENIVNLLGACTLS 113

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.1 bits (158), Expect = 1e-13
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + + F  VLG G+F +V+LAE +  + ++ A+K + K  +  +        E  +L    
Sbjct: 9   DIYDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKKAL--EGKEGSMENEIAVLH-KI 64

Query: 159 KHPFLTALHSCFQTK 173
           KHP + AL   +++ 
Sbjct: 65  KHPNIVALDDIYESG 79

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 64.5 bits (156), Expect = 2e-13
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           +D+  ++ LG+G + +V  A    +++E   VK+LK               E +IL    
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKP------VKKKKIKREIKILENLR 87

Query: 159 KHPFLTALHSCFQTKVK 175
             P +  L    +  V 
Sbjct: 88  GGPNIITLADIVKDPVS 104

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 3e-13
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +ED+  ++ LG+G++G+V LA  R  ++E  AVK++     +  D  +    E  I  + 
Sbjct: 4   VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAV--DCPENIKKEICINKM- 59

Query: 158 AKHPFLTALHSCFQTK 173
             H  +   +   +  
Sbjct: 60  LNHENVVKFYGHRREG 75

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.6 bits (154), Expect = 3e-13
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 6/83 (7%)

Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA 155
           +   D      LG G +G+V     +       AVK LK+D +    +V+  + E  ++ 
Sbjct: 14  MERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTLKEDTM----EVEEFLKEAAVMK 68

Query: 156 LAAKHPFLTALHSCFQTKVKCSF 178
              KHP L  L      +     
Sbjct: 69  -EIKHPNLVQLLGVCTREPPFYI 90

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 4e-13
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +E+F  ++ +G+G++G V  A  +  + EV A+K ++ D    +      + E  +L   
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDT-ETEGVPSTAIREISLLK-E 57

Query: 158 AKHPFLTALHSCFQTK 173
             HP +  L     T+
Sbjct: 58  LNHPNIVKLLDVIHTE 73

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 4e-13
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 94  RKVGLED-FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
           R +  ED +  I  LG G+FGKV  A+ +  +  + A KV+       +++++  M E  
Sbjct: 6   RDLNPEDFWEIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTK---SEEELEDYMVEID 61

Query: 153 ILALAAKHPFLTALHSCFQTK 173
           ILA +  HP +  L   F  +
Sbjct: 62  ILA-SCDHPNIVKLLDAFYYE 81

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 63.2 bits (153), Expect = 5e-13
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ------DDDVDCTMTEKR 152
           E++   ++LG+G    V     +  + + YAVK++              +  + T+ E  
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 61

Query: 153 ILALAAKHPFLTALHSCFQTKVK 175
           IL   + HP +  L   ++T   
Sbjct: 62  ILRKVSGHPNIIQLKDTYETNTF 84

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 63.2 bits (153), Expect = 6e-13
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
            + +  ++ LG G+FG V    ++ ++  V+  K +     +    V     E  I+   
Sbjct: 28  YDYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYPLDKYTV---KNEISIMNQ- 82

Query: 158 AKHPFLTALHSCFQTK 173
             HP L  LH  F+ K
Sbjct: 83  LHHPKLINLHDAFEDK 98

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 7e-13
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E +  +  +G G++G V  A     +    AVK L +           T  E R+L    
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLK-HM 74

Query: 159 KHPFLTALHSCFQTK 173
           KH  +  L   F   
Sbjct: 75  KHENVIGLLDVFTPA 89

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 62.8 bits (152), Expect = 8e-13
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKR--GSSDEVYAVKVLKKDVIIQDDDVDCTMTE 150
            +++ +      +V+G G FG+V     +  G  +   A+K LK      +      ++E
Sbjct: 20  AKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSE 77

Query: 151 KRILALAAKHPFLTALHSCFQTK 173
             I+     HP +  L       
Sbjct: 78  ASIMG-QFDHPNVIHLEGVVTKS 99

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 9e-13
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 94  RKVGLED-FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDD---VDCTMT 149
           R+  ++D +   + LG G F  V    ++ S+   YA K +KK            +    
Sbjct: 4   RQENVDDYYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGVSREDIER 62

Query: 150 EKRILALAAKHPFLTALHSCFQTK 173
           E  IL    +HP +  LH  ++ K
Sbjct: 63  EVSILKE-IQHPNVITLHEVYENK 85

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 9e-13
 Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
            +  F++ +G G FG V L      + +  A+K +++  + ++D     + E  ++    
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMSEED----FIEEAEVMM-KL 57

Query: 159 KHPFLTALHSCFQTK 173
            HP L  L+     +
Sbjct: 58  SHPKLVQLYGVCLEQ 72

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 1e-12
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDE------VYAVKVLKKDVIIQDDDVDCTMTEKR 152
           +     K LG+G+FG+V+LAE  G   +        AVK+LK D    + D+   ++E  
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEME 70

Query: 153 ILALAAKHPFLTALHSCFQTK 173
           ++ +  KH  +  L       
Sbjct: 71  MMKMIGKHKNIINLLGACTQD 91

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 1e-12
 Identities = 13/73 (17%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E     + +G+G FG V         +   AV +        D   +  + E   +    
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR-QF 65

Query: 159 KHPFLTALHSCFQ 171
            HP +  L     
Sbjct: 66  DHPHIVKLIGVIT 78

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 1e-12
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           + +  +  +G+G++GKV  A    +     A+K ++     ++     T+ E  +L    
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ-TGEEGMPLSTIREVAVLRHLE 65

Query: 159 --KHPFLTALHSCFQTK 173
             +HP +  L       
Sbjct: 66  TFEHPNVVRLFDVCTVS 82

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 3e-12
 Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 90  SGGDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMT 149
           S GD K   + +   + +G+G+ G V  A    ++ +  A++ +      Q    +  + 
Sbjct: 14  SVGDPK---KKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQ---QQPKKELIIN 66

Query: 150 EKRILALAAKHPFLTALHSCFQTK 173
           E  ++    K+P +      +   
Sbjct: 67  EILVMR-ENKNPNIVNYLDSYLVG 89

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 4e-12
 Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           ++ +  ++ +G+G++G V  A+ R  + E+ A+K ++ D    +      + E  +L   
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLD-DDDEGVPSSALREICLLK-E 57

Query: 158 AKHPFLTALHSCFQTKVKCSF 178
            KH  +  LH    +  K + 
Sbjct: 58  LKHKNIVRLHDVLHSDKKLTL 78

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 60.7 bits (146), Expect = 5e-12
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +E +H ++ +G+G++G V  A+      E +A+K ++ +    +     T+ E  IL   
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNN--YGETFALKKIRLEK-EDEGIPSTTIREISILK-E 56

Query: 158 AKHPFLTALHSCFQTKVKCSF 178
            KH  +  L+    TK +   
Sbjct: 57  LKHSNIVKLYDVIHTKKRLVL 77

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 6e-12
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 104 IKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA-KHPF 162
           +  LG+G F  V  A  + +++++ A+K +K     +  D       + I  L    HP 
Sbjct: 3   LDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 163 LTALHSCFQTK 173
           +  L   F  K
Sbjct: 62  IIGLLDAFGHK 72

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 6e-12
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           +  +  +  +G+G+FG+V  A  R  + +  A+K +  +   ++      + E +IL L 
Sbjct: 9   VSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMEN-EKEGFPITALREIKILQL- 65

Query: 158 AKHPFLTALHSCFQTKVKCSF 178
            KH  +  L    +TK     
Sbjct: 66  LKHENVVNLIEICRTKASPYN 86

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 7e-12
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 98  LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALA 157
           L+ +  +K +G G+ G V  A      D   A+K L +              E  ++   
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKC- 72

Query: 158 AKHPFLTALHSCFQTK 173
             H  + +L + F  +
Sbjct: 73  VNHKNIISLLNVFTPQ 88

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 8e-12
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E +   + LG+G FG V    +  SS + Y  K +K        D      E  IL + A
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVK----GTDQVLVKKEISILNI-A 58

Query: 159 KHPFLTALHSCFQTK 173
           +H  +  LH  F++ 
Sbjct: 59  RHRNILHLHESFESM 73

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 1e-11
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 7/72 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E    ++ LG G FG+V +    G      AVK LK+  +  D      + E  ++    
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNG--HTKVAVKSLKQGSMSPDA----FLAEANLMK-QL 65

Query: 159 KHPFLTALHSCF 170
           +H  L  L++  
Sbjct: 66  QHQRLVRLYAVV 77

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 10/80 (12%)

Query: 94  RKVGLEDFHFI-KVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
           +   ++D+    +VLG G  GKV+    +  + E +A+K+L+     +         E  
Sbjct: 6   KNAIIDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDCPKARR--------EVE 56

Query: 153 ILALAAKHPFLTALHSCFQT 172
           +   A++ P +  +   ++ 
Sbjct: 57  LHWRASQCPHIVRIVDVYEN 76

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 92  GDRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
           G  +     +   KV+G GSFG V  A+    S E+ A+K + +D   ++        E 
Sbjct: 13  GPDRPQEVSYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDKRFKNR-------EL 64

Query: 152 RILALAAKHPFLTALHSCFQT 172
           +I+     H  +  L   F +
Sbjct: 65  QIMR-KLDHCNIVRLRYFFYS 84

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 2e-11
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDC---TMTEKRILA- 155
            +    +LG G FG V    +  S +   A+K ++KD I    ++        E  +L  
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 156 LAAKHPFLTALHSCFQTK 173
           +++    +  L   F+  
Sbjct: 64  VSSGFSGVIRLLDWFERP 81

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
             +  ++ +G G++G V  A     +    A+K L +     +        E R+L    
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRP-FQSELFAKRAYRELRLLK-HM 74

Query: 159 KHPFLTALHSCFQTK 173
           +H  +  L   F   
Sbjct: 75  RHENVIGLLDVFTPD 89

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 94  RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV---YAVKVLKKDVIIQDDDVDCTMTE 150
           R +   +F  IKVLG G+FG V         ++V    A+K L++            + E
Sbjct: 4   RILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDE 61

Query: 151 KRILALAAKHPFLTALHSCFQTK 173
             ++A +  +P +  L     T 
Sbjct: 62  AYVMA-SVDNPHVCRLLGICLTS 83

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 3e-11
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 102 HFIKVLGKGSFGKVMLAE--KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAK 159
           HF +V+G+G FG V               AVK L +  I    +V   +TE  I+   + 
Sbjct: 30  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 87

Query: 160 HPFLTALHSCFQTK 173
              L+ L  C +++
Sbjct: 88  PNVLSLLGICLRSE 101

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 5e-11
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
           +     K LG+G+FG+V+ A+  G          AVK+LK+       +    M+E +IL
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKIL 70

Query: 155 ALAAKHPFLTALHSCFQTK 173
                H  +  L       
Sbjct: 71  IHIGHHLNVVNLLGACTKP 89

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 5e-11
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 93  DRK-VGLEDFHFIKVLGKGSFGKVMLAE-KRGSSDEVYAVKVLKKDVIIQDDDVDCTMTE 150
           DRK + LED    K LG G+FG V     +     +  AVK+LK +        D  + E
Sbjct: 4   DRKLLTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE-ANDPALKDELLAE 58

Query: 151 KRILALAAKHPFLTALHSCFQTKVKC 176
             ++     +P++  +    + +   
Sbjct: 59  ANVMQ-QLDNPYIVRMIGICEAESWM 83

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-11
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 99  EDFHFIKV-LGKGSFGKVMLAEKRGSSDEV-YAVKVLKKDVIIQDDDVDCTMTEKRILAL 156
           ++     + LG G+FG V     R    ++  A+KVLK+    +  D +  M E +I+  
Sbjct: 8   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMH- 64

Query: 157 AAKHPFLTALHSCFQT 172
              +P++  L    Q 
Sbjct: 65  QLDNPYIVRLIGVCQA 80

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.4 bits (135), Expect = 1e-10
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           +   + +G+GSFG +        +++  A+K   +       D      E R   L A  
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPR-----RSDAPQLRDEYRTYKLLAGC 60

Query: 161 PFLTALHSCFQTK 173
             +  ++   Q  
Sbjct: 61  TGIPNVYYFGQEG 73

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           +  +  +G+G++G V  A     +    A+K +             T+ E +IL    +H
Sbjct: 10  YTNLSYIGEGAYGMVCSAYDN-VNKVRVAIKKISPFE--HQTYCQRTLREIKILL-RFRH 65

Query: 161 PFLTALHSCFQTK 173
             +  ++   +  
Sbjct: 66  ENIIGINDIIRAP 78

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 3e-10
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
           E       LG+G FG+V +    G+     A+K LK   +  +      + E +++    
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEA----FLQEAQVMK-KL 69

Query: 159 KHPFLTALHSCFQTK 173
           +H  L  L++    +
Sbjct: 70  RHEKLVQLYAVVSEE 84

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 3e-10
 Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 7/82 (8%)

Query: 96  VGLEDFHFIKVLGKGSFGKVMLAEKRG----SSDEVYAVKVLKKDVIIQDDDVDCTMTEK 151
           V  E     + LG+GSFG V     +G      +   A+K + +       +    + E 
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEA 74

Query: 152 RILALAAKHPFLTALHSCFQTK 173
            ++        +  L       
Sbjct: 75  SVMK-EFNCHHVVRLLGVVSQG 95

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 4e-10
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRIL 154
            +  +++ +G+G+FG+V  A   G        + AVK+LK++     D       E  ++
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALM 70

Query: 155 ALAAKHPFLTALHSCFQTK 173
           A    +P +  L       
Sbjct: 71  AE-FDNPNIVKLLGVCAVG 88

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 4e-10
 Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILA 155
                 KV+G G FG+V     + SS +     A+K LK      +      + E  I+ 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMG 64

Query: 156 LAAKHPFLTALHSCFQTK 173
               H  +  L       
Sbjct: 65  -QFSHHNIIRLEGVISKY 81

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 5e-10
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 3/75 (4%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
             F   +G+GSF  V       ++ EV A   L+    +   +      E  +L    +H
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEV-AWCELQDR-KLTKSERQRFKEEAEMLK-GLQH 67

Query: 161 PFLTALHSCFQTKVK 175
           P +   +  +++ VK
Sbjct: 68  PNIVRFYDSWESTVK 82

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 8e-10
 Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 6/71 (8%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
                 + +G GSFG V   +  G      AVK+L          +     E  +L    
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTA-PTPQQLQAFKNEVGVLR-KT 61

Query: 159 KHPFLTALHSC 169
           +H  +      
Sbjct: 62  RHVNILLFMGY 72

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.7 bits (128), Expect = 1e-09
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 7/81 (8%)

Query: 93  DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKR 152
           + +VG   +   + +G GSFG + L     ++ E  A+K+                 E +
Sbjct: 2   ELRVG-NRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECV-----KTKHPQLHIESK 54

Query: 153 ILALAAKHPFLTALHSCFQTK 173
           I  +      +  +  C    
Sbjct: 55  IYKMMQGGVGIPTIRWCGAEG 75

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.6 bits (122), Expect = 8e-09
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKH 160
           +  ++ LG G F  V LA+    ++   A+K+++ D +  +   D     +R+       
Sbjct: 15  YILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV-----ND 68

Query: 161 PFLTALHSC 169
              T   S 
Sbjct: 69  ADNTKEDSM 77

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 5e-08
 Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 10/76 (13%)

Query: 99  EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA 158
                 + +GKG FG+V   + RG   E  AVK+          +      E  I     
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRG---EEVAVKIFSS------REERSWFREAEIYQTVM 53

Query: 159 -KHPFLTALHSCFQTK 173
            +H  +    +     
Sbjct: 54  LRHENILGFIAADNKD 69

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 36.3 bits (83), Expect = 8e-04
 Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 8/71 (11%)

Query: 105 KVLGKGSFGKVMLAEKRGSSDEVYAVKVLK------KDVIIQDDDVDCTMTEKRILALAA 158
           K++G+G    V              VK  K      K V  + D  D   +   I +   
Sbjct: 6   KLMGEGKESAVFNC--YSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63

Query: 159 KHPFLTALHSC 169
           +   L  L   
Sbjct: 64  EFRALQKLQGL 74

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.68
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.67
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.66
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.64
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.64
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.63
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.63
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.62
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.62
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.61
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.61
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.61
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.6
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.6
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.59
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.59
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.59
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.58
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.58
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.58
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.56
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.55
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.55
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.53
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.52
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.52
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.52
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.52
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.51
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.51
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.5
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.5
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.5
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.49
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.47
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.46
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.46
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.45
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.45
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.45
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.45
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.44
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.44
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.43
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.43
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.42
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.41
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.41
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.4
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.39
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.39
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.38
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.37
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.36
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.34
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.34
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.29
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.28
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.24
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.15
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.14
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.13
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.42
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	85.99

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.2e-17  Score=123.22  Aligned_cols=83  Identities=39%  Similarity=0.624  Sum_probs=72.6

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .....++|+++++||+|+||.||+|.++.+ +..||||++.+...........+.+|+.+|+.+ +|||||+++++|.+.
T Consensus         3 ~~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~-~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~   80 (288)
T d1uu3a_           3 RKKRPEDFKFGKILGEGSFSTVVLARELAT-SREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDD   80 (288)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECS
T ss_pred             CCCCCCCCEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEEC
Confidence            344557899999999999999999999989 999999999865443445567899999999999 999999999999999


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        81 ~~~~i   85 (288)
T d1uu3a_          81 EKLYF   85 (288)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            98875

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.5e-17  Score=121.55  Aligned_cols=82  Identities=30%  Similarity=0.406  Sum_probs=72.9

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .+.+++|++++.||+|+||.||+|.++.+ +..||+|++.+...........+.+|+.+|..+ +|||||+++++|.+.+
T Consensus         2 ~~~l~dy~i~~~iG~G~fg~Vy~~~~~~~-~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~   79 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFGNVYLAREKQS-KFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDAT   79 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred             CcchhHeEEEEEEecCCCcEEEEEEECCC-CcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECC
Confidence            45688999999999999999999999989 999999999866543445567899999999999 9999999999999998


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        80 ~~~i   83 (263)
T d2j4za1          80 RVYL   83 (263)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=7e-17  Score=124.51  Aligned_cols=82  Identities=49%  Similarity=0.867  Sum_probs=73.3

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++.+++|+++++||+|+||.||+|.++.+ +..||||++++..+........+.+|+.+|..+ .|||||+++++|.+.+
T Consensus         1 ~i~l~dy~~~~~lG~G~fg~V~~~~~~~~-~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~   78 (337)
T d1o6la_           1 KVTMNDFDYLKLLGKGTFGKVILVREKAT-GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHD   78 (337)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSS
T ss_pred             CCchHhcEEEEEEecCcCeEEEEEEECCC-CCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeecccc
Confidence            35788999999999999999999999999 999999999876543445667899999999999 9999999999999999


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        79 ~~~i   82 (337)
T d1o6la_          79 RLCF   82 (337)
T ss_dssp             EEEE
T ss_pred             cccc
Confidence            8885

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=1.1e-16  Score=122.39  Aligned_cols=80  Identities=35%  Similarity=0.672  Sum_probs=71.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++++.||+|+||.||+|.++.+ |..||||++++.........+.+.+|+.+|+.+ .|||||+++++|.+.+.+
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~-g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~   79 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHN-GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQI   79 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCC-CCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCee
Confidence            578899999999999999999999999 999999999865443445567899999999999 999999999999999988


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        80 ~i   81 (316)
T d1fota_          80 FM   81 (316)
T ss_dssp             EE
T ss_pred             ee
Confidence            75

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.7e-16  Score=117.77  Aligned_cols=78  Identities=23%  Similarity=0.283  Sum_probs=66.2

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++++.||+|+||.||+|.++.+ ++.||||+++....  ....+.+.+|+.+|+.+ +|||||+++++|.+.+.+
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~-~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~   78 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVT-EEAVAVKIVDMKRA--VDCPENIKKEICINKML-NHENVVKFYGHRREGNIQ   78 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECC---------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCC-CCEEEEEEEehhhc--chHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCcee
Confidence            357899999999999999999999999 99999999986532  33456799999999999 999999999999999988


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        79 ~i   80 (271)
T d1nvra_          79 YL   80 (271)
T ss_dssp             EE
T ss_pred             EE
Confidence            75

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.5e-16  Score=119.25  Aligned_cols=78  Identities=24%  Similarity=0.398  Sum_probs=66.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++++.||+|+||.||+|.+..+ ++.||||++..... .......+.+|+.+|+.+ +|||||+++++|.+.+++|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~   77 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTE-TEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLY   77 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCC-CCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEEecccccccccee
Confidence            47899999999999999999999989 99999999975532 334567899999999999 9999999999999999887


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        78 i   78 (298)
T d1gz8a_          78 L   78 (298)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.1e-16  Score=117.33  Aligned_cols=78  Identities=23%  Similarity=0.322  Sum_probs=68.0

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc---cchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ---DDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~---~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ++|++++.||+|+||.||+|.++.+ |..||||++.+.....   ....+.+.+|+.+|+.+ +|||||+++++|.+.++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~-~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKST-GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCC-CCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            5699999999999999999999989 9999999998654322   12356799999999999 99999999999999998


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        88 ~~i   90 (293)
T d1jksa_          88 VIL   90 (293)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            885

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=6.4e-16  Score=116.65  Aligned_cols=75  Identities=28%  Similarity=0.438  Sum_probs=67.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|++++.||+|+||.||+|.++.+ +..||+|++...   .....+.+.+|+.+|+.+ +|||||+++++|.+.+.+||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKET-SVLAAAKVIDTK---SEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECS---SSGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCC-CeEEEEEEECcC---CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEEE
Confidence            4699999999999999999999999 999999999765   344567899999999999 99999999999999998875

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=4e-16  Score=118.89  Aligned_cols=77  Identities=23%  Similarity=0.364  Sum_probs=68.7

Q ss_pred             CeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         100 DFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       100 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      .|+.++.||+|+||.||+|.+..+ +..||||++...........+.+.+|+.+|..+ +|||||+++++|.+.+.+||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~-~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~i   92 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWL   92 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTT-TEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCC-CcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEEEE
Confidence            499999999999999999999989 999999999876543445567899999999999 99999999999999988875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.6e-16  Score=120.46  Aligned_cols=79  Identities=22%  Similarity=0.321  Sum_probs=70.1

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      +..++|++++.||+|+||.||+|.++.+ +..||+|+++...  .......+.+|+.+|+.+ +|||||+++++|.+.++
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~-~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~   78 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPS-GLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGE   78 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTT-TEEEEEEEEECCC--CTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCC-CcEEEEEEEChhh--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            4567899999999999999999999989 9999999997642  344567899999999999 99999999999999998


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        79 ~~i   81 (322)
T d1s9ja_          79 ISI   81 (322)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.61  E-value=1.1e-15  Score=118.30  Aligned_cols=77  Identities=23%  Similarity=0.462  Sum_probs=69.1

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      .+++|++++.||+|+||.||+|.++.+ |..||||++...   .....+.+.+|+.+|..+ .|||||+++++|.+.+.+
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~-g~~vAvK~i~~~---~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~   98 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERAT-GNNFAAKFVMTP---HESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEM   98 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTT-TEEEEEEEECCC---SHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCC-CCEEEEEEEccc---chhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence            367899999999999999999999999 999999999765   234457789999999999 999999999999999988


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        99 ~i  100 (350)
T d1koaa2          99 VM  100 (350)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.1e-15  Score=116.90  Aligned_cols=75  Identities=27%  Similarity=0.390  Sum_probs=67.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|++++.||+|+||.||+|.+..+ +..||+|+++...    .....+.+|+.+|..+ +|||||+++++|++.+++|
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~-~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~   77 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSS-KKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCC-CcEEEEEEEcCCc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE
Confidence            57899999999999999999999989 9999999997652    2335688999999999 9999999999999999988


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        78 l   78 (321)
T d1tkia_          78 M   78 (321)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=5.8e-16  Score=119.88  Aligned_cols=81  Identities=37%  Similarity=0.647  Sum_probs=71.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVK  175 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~  175 (178)
                      ..+++|++++.||+|+||.||+|.++.+ |..||||++.+.........+.+.+|+.+|+.+ .|||||+++++|.+.+.
T Consensus        38 ~~ld~y~i~~~lG~G~fg~Vy~a~~~~~-g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          38 AQLDQFDRIKTLGTGSFGRVMLVKHKES-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred             CCccCeEEEEEeecCcCcEEEEEEECCC-CCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeecccccccccc
Confidence            4468999999999999999999999999 999999999865443445567899999999999 99999999999999888


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +|+
T Consensus       116 ~~~  118 (350)
T d1rdqe_         116 LYM  118 (350)
T ss_dssp             EEE
T ss_pred             ccc
Confidence            764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=7.8e-16  Score=116.42  Aligned_cols=75  Identities=12%  Similarity=0.205  Sum_probs=67.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|++++.||+|+||.||+|.++.+ |..||||++....   ....+.+.+|+.+|+.+ .|||||+++++|.+.+.+||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~-~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~i   94 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVAT-GQEVAIRQMNLQQ---QPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV   94 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTT-CCEEEEEEEEGGG---CSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCC-CCEEEEEEEeccc---ChHHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEEE
Confidence            4699999999999999999999999 9999999998653   33456799999999999 99999999999999998885

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=7e-16  Score=115.33  Aligned_cols=78  Identities=17%  Similarity=0.323  Sum_probs=66.2

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe--CCe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT--KVK  175 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~--~~~  175 (178)
                      .++|++++.||+|+||.||+|.++.+ |..||+|++..... .....+.+.+|+.+|..+ .|||||+++++|.+  .+.
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~   79 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSD-GKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTT   79 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTT-CCEEEEEEECCTTS-CHHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----C
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCC-CCEEEEEEEChhhC-CHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCE
Confidence            47899999999999999999999999 99999999987654 345567899999999999 99999999999865  344


Q ss_pred             EeC
Q psy1646         176 CSF  178 (178)
Q Consensus       176 ~yl  178 (178)
                      +||
T Consensus        80 ~~i   82 (269)
T d2java1          80 LYI   82 (269)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            553

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.59  E-value=1.1e-15  Score=118.40  Aligned_cols=76  Identities=24%  Similarity=0.412  Sum_probs=67.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.++.+ |..||||+++...   ......+.+|+.+|..+ .|||||+++++|.+.+.+|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~-~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~  102 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKAT-GRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMV  102 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCC-CCEEEEEEECCcc---hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEE
Confidence            46799999999999999999999999 9999999998652   33456788999999999 9999999999999999887


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus       103 i  103 (352)
T d1koba_         103 L  103 (352)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.9e-15  Score=113.67  Aligned_cols=78  Identities=22%  Similarity=0.411  Sum_probs=69.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|+++++||+|+||+||+|.+..+ +..||||+++.... .......+.+|+.+|+.+ .|||||+++++|.+...+|
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~-~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~   77 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRET-HEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCC-CcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhc-CcCCEEeecccccccccee
Confidence            46899999999999999999999988 99999999976542 455678899999999999 9999999999999988876


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        78 i   78 (292)
T d1unla_          78 L   78 (292)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=1.1e-15  Score=115.25  Aligned_cols=78  Identities=24%  Similarity=0.304  Sum_probs=68.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++..++|++.+.||+|+||.||+|.+..+ +..||||+++...    ...+.+.+|+.+|..+ +|||||+++++|.+.+
T Consensus        13 ei~~~~~~~~~~iG~G~fg~Vy~a~~~~~-~~~vAvK~i~~~~----~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~   86 (287)
T d1opja_          13 EMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREP   86 (287)
T ss_dssp             BCCGGGEEEEEETTTTTTSSEEEEEEGGG-TEEEEEEECCTTC----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS
T ss_pred             EecHHHeEEeeEEeeCCCeEEEEEEECCC-CeEEEEEEECCcc----chHHHHHHHHHHHHhC-CCCCEecCCccEeeCC
Confidence            45667899999999999999999999988 9999999997542    2356799999999999 9999999999999887


Q ss_pred             eEeC
Q psy1646         175 KCSF  178 (178)
Q Consensus       175 ~~yl  178 (178)
                      .+||
T Consensus        87 ~~~i   90 (287)
T d1opja_          87 PFYI   90 (287)
T ss_dssp             SCEE
T ss_pred             eeEE
Confidence            7664

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=9.5e-16  Score=116.65  Aligned_cols=76  Identities=26%  Similarity=0.482  Sum_probs=62.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.|+++++||+|+||.||+|.++.+ ++.||||++.+...  ......+.+|+.+|..+ +|||||+++++|.+.+.+||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~l   84 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRT-QKLVAIKCIAKKAL--EGKEGSMENEIAVLHKI-KHPNIVALDDIYESGGHLYL   84 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTT-CCEEEEEEEEC------------CHHHHHHHTC-CCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCC-CCEEEEEEEchHHh--hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence            5599999999999999999999988 99999999986543  23345688999999999 99999999999999998885

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.58  E-value=1.4e-15  Score=114.40  Aligned_cols=77  Identities=25%  Similarity=0.399  Sum_probs=67.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      +++|+++++||+|+||.||+|.++ + ++.||||+++.... .......+.+|+.+|..+ +|||||+++++|...+.+|
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~-~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~   76 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-Y-GETFALKKIRLEKE-DEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLV   76 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-T-SCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-C-CCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCcee
Confidence            478999999999999999999886 6 88999999976543 344567899999999999 9999999999999988877


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        77 i   77 (286)
T d1ob3a_          77 L   77 (286)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.2e-15  Score=114.29  Aligned_cols=79  Identities=56%  Similarity=0.912  Sum_probs=67.6

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHH-HhcCCCCccccceeEEeCCeE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILA-LAAKHPFLTALHSCFQTKVKC  176 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~-~l~~hp~iv~l~~~~~~~~~~  176 (178)
                      +++|+++++||+|+||.||+|.++.+ ++.||||++.+...........+.+|+.++. .+ .|||||+++++|.+.+++
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t-~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~-~hp~Iv~~~~~~~~~~~~   78 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-EHPFLTHMFCTFQTKENL   78 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTT-TEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-TCTTBCCEEEEEECSSEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCC-CCEEEEEEEchhhccChHHHHHHHHHHHHHHHhC-CCCcEEEEEEEEccCCce
Confidence            47899999999999999999999999 9999999998654333445567788888776 56 999999999999999988


Q ss_pred             eC
Q psy1646         177 SF  178 (178)
Q Consensus       177 yl  178 (178)
                      ||
T Consensus        79 yi   80 (320)
T d1xjda_          79 FF   80 (320)
T ss_dssp             EE
T ss_pred             eE
Confidence            85

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.55  E-value=4.9e-15  Score=110.93  Aligned_cols=74  Identities=23%  Similarity=0.231  Sum_probs=65.3

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++|++++.||+|+||.||+|.+..+ ++.||||++++...........+.+|+.+|..+ +|||||++++++...+
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~-~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRL-HRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAET   80 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEC
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCC-CCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeecc
Confidence            5699999999999999999999999 999999999876543445567899999999999 9999999999988754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.55  E-value=1.1e-14  Score=109.16  Aligned_cols=80  Identities=21%  Similarity=0.277  Sum_probs=68.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccc------cchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQ------DDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~------~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .++|++++.||+|+||+||+|.+..+ ++.||||++.+.....      ....+.+.+|+.+|..+..|||||+++++|.
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~-~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPT-CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCC-CCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            47899999999999999999999988 9999999998654321      1223468999999999944999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      +.+++||
T Consensus        81 ~~~~~~i   87 (277)
T d1phka_          81 TNTFFFL   87 (277)
T ss_dssp             CSSEEEE
T ss_pred             cCcceEE
Confidence            9998885

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.53  E-value=4.9e-15  Score=115.15  Aligned_cols=81  Identities=27%  Similarity=0.523  Sum_probs=65.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHH---HHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTE---KRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E---i~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +++++|+++++||+|+||.||+|.+..+ |..||||++.+..+........+.+|   +.++..+ .|||||+++++|.+
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t-~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~   78 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADT-GKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHT   78 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEEC
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCC-CCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEE
Confidence            3578999999999999999999999999 99999999986544333334445566   4455555 79999999999999


Q ss_pred             CCeEeC
Q psy1646         173 KVKCSF  178 (178)
Q Consensus       173 ~~~~yl  178 (178)
                      .+.+||
T Consensus        79 ~~~~~i   84 (364)
T d1omwa3          79 PDKLSF   84 (364)
T ss_dssp             SSEEEE
T ss_pred             CCEEEE
Confidence            988875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.8e-15  Score=110.09  Aligned_cols=74  Identities=24%  Similarity=0.341  Sum_probs=64.5

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|+++++||+|+||.||+|.++ + +..||||.+++...    ..+.+.+|+.++..+ .|||||+++++|.+.+.+|
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~-~-~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~   75 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR-G-QYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIF   75 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET-T-TEEEEEEEEESSSS----CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC-C-CCEEEEEEECcCcC----CHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceE
Confidence            468999999999999999999985 5 77899999986532    345799999999999 9999999999999888776


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        76 i   76 (258)
T d1k2pa_          76 I   76 (258)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.3e-14  Score=112.28  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=62.1

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +++|+++++||+|+||+||+|.+..+ |..||||++.+... .......+.+|+.+|..+ .|||||+++++|...
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t-~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~   88 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQ   88 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTT-TEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCC-CCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEecc
Confidence            36799999999999999999999999 99999999986543 445566899999999999 999999999999643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.4e-14  Score=108.83  Aligned_cols=80  Identities=20%  Similarity=0.194  Sum_probs=65.2

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCC----CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSD----EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~----~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      ++..++|++.++||+|+||.||+|.++.+ +    ..||||.++...  .......+.+|+.+|..+ +|||||++++++
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~-~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~   78 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTS-SGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVI   78 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEE
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCC-CCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhc-CCCCEeeeeEEE
Confidence            45567899999999999999999998865 4    369999987543  334456789999999999 999999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      ...+.+|+
T Consensus        79 ~~~~~~~~   86 (283)
T d1mqba_          79 SKYKPMMI   86 (283)
T ss_dssp             CSSSSEEE
T ss_pred             ecCCceEE
Confidence            88777653

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.5e-14  Score=108.10  Aligned_cols=69  Identities=17%  Similarity=0.232  Sum_probs=60.6

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      |++.++||+|+||.||+|.+..+ +..||+|.+..... .....+.+.+|+.+|..+ +|||||+++++|.+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~-~~~va~K~i~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~   79 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTET-TVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHPNIVRFYDSWES   79 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCC-CeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEee
Confidence            57888999999999999999988 99999999986543 344567899999999999 99999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.8e-14  Score=108.75  Aligned_cols=76  Identities=25%  Similarity=0.285  Sum_probs=59.5

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCC----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDE----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      +..+|+++++||+|+||.||+|.+..+ |.    .||+|.+....  .....+.+.+|+.+|..+ +|||||+++++|.+
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~   82 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLT   82 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC-----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEES
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEEcCC-CCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec
Confidence            446899999999999999999999877 65    57888776432  344567899999999999 99999999999987


Q ss_pred             CCeE
Q psy1646         173 KVKC  176 (178)
Q Consensus       173 ~~~~  176 (178)
                      .+..
T Consensus        83 ~~~~   86 (317)
T d1xkka_          83 STVQ   86 (317)
T ss_dssp             SSEE
T ss_pred             CCee
Confidence            6543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.4e-14  Score=107.66  Aligned_cols=74  Identities=19%  Similarity=0.324  Sum_probs=63.4

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      .++|++++.||+|+||.||+|.+. + +..||||.++...    ...+.+.+|+.++..+ +|||||+++++|...+.+|
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~-~-~~~vAvK~i~~~~----~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~   76 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWL-N-KDKVAIKTIREGA----MSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPIC   76 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEET-T-TEEEEEEECCSSS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCE
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEEC-C-CCEEEEEEECCCc----CcHHHHHHHHHHHHhc-CCCCcccccceeccCCceE
Confidence            468999999999999999999986 5 6789999997542    2346799999999999 9999999999998877766


Q ss_pred             C
Q psy1646         178 F  178 (178)
Q Consensus       178 l  178 (178)
                      |
T Consensus        77 l   77 (263)
T d1sm2a_          77 L   77 (263)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.5e-14  Score=108.03  Aligned_cols=78  Identities=19%  Similarity=0.202  Sum_probs=66.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccc---hhhhHHHHHHHHHHhcC--CCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDD---DVDCTMTEKRILALAAK--HPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~---~~~~~~~Ei~il~~l~~--hp~iv~l~~~~~~~  173 (178)
                      ++|+++++||+|+||.||+|.+..+ +..||||++.+.......   ...++.+|+.+|+.+ .  |||||+++++|.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~-~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSD-NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV-SSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHH-CSSSCSBCCEEEEEECS
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCC-CCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHh-ccCCCCccEEEEEEeeC
Confidence            5799999999999999999999999 999999999865432221   234578999999999 5  89999999999998


Q ss_pred             CeEeC
Q psy1646         174 VKCSF  178 (178)
Q Consensus       174 ~~~yl  178 (178)
                      +.+||
T Consensus        82 ~~~~l   86 (273)
T d1xwsa_          82 DSFVL   86 (273)
T ss_dssp             SEEEE
T ss_pred             CeEEE
Confidence            88774

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.2e-15  Score=110.77  Aligned_cols=75  Identities=24%  Similarity=0.375  Sum_probs=59.6

Q ss_pred             EEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc--ccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646         102 HFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII--QDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      +.+++||+|+||+||+|.++.+ |+.||||+++.....  .......+.+|+.+|..+ .|||||+++++|...+++||
T Consensus         1 E~l~~lG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~i   77 (299)
T d1ua2a_           1 EKLDFLGEGQFATVYKARDKNT-NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISL   77 (299)
T ss_dssp             CEEEEEEEETTEEEEEEECSSC-CSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEE
T ss_pred             CcceEeccCcCeEEEEEEECCC-CcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceee
Confidence            3578999999999999999988 999999999754321  122346789999999999 99999999999999888775

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.3e-14  Score=111.79  Aligned_cols=74  Identities=19%  Similarity=0.234  Sum_probs=59.3

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      .++|++++.||+|+||+||+|.+..+ |+.||||++.+... .....+.+.+|+.+|+.+ .|||||+++++|...+
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~   90 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRT-GAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDE   90 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTT-CCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCS
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCC-CCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCc
Confidence            56899999999999999999999999 99999999976533 445567899999999999 9999999999998654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.49  E-value=1.3e-14  Score=109.77  Aligned_cols=80  Identities=19%  Similarity=0.312  Sum_probs=64.5

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCC---eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE---VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~---~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      .+..++|++.++||+|+||.||+|.++.+ +.   .||||.+....  .....+.+.+|+.+|..+ +|||||+++++|.
T Consensus        22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~   97 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFGEVCSGHLKLP-GKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNVIHLEGVVT   97 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECC----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC
T ss_pred             hhChhhcEEeeEEeeCCCeEEEEEEEeCC-CCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhC-CCCCCccEEEEEe
Confidence            35567899999999999999999998766 54   58888876542  344566899999999999 9999999999998


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      ..+.+||
T Consensus        98 ~~~~~~i  104 (299)
T d1jpaa_          98 KSTPVMI  104 (299)
T ss_dssp             SSSSCEE
T ss_pred             eCCEEEE
Confidence            8877664

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=4.5e-14  Score=107.42  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=62.4

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      -..++|+++++||+|+||+||+|.+..+ |+.||||++..... .......+.+|+.+|+.+ .|+||++++++|...
T Consensus         7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~-~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~   81 (318)
T d3blha1           7 DEVSKYEKLAKIGQGTFGEVFKARHRKT-GQKVALKKVLMENE-KEGFPITALREIKILQLL-KHENVVNLIEICRTK   81 (318)
T ss_dssp             CBGGGEEEEEEEEECSSSEEEEEEETTT-CCEEEEEEC----C-TTSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC-
T ss_pred             CccCCEEEEEEEecCcCeEEEEEEECCC-CCEEEEEEEehhhc-chHHHHHHHHHHHHHHHh-cCCCccceEeeeecc
Confidence            3468899999999999999999999988 99999999876543 345567789999999999 999999999988664

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=4.6e-14  Score=107.17  Aligned_cols=82  Identities=23%  Similarity=0.323  Sum_probs=64.7

Q ss_pred             CCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCe--EEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          94 RKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEV--YAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        94 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~--~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..+..++|++.++||+|+||.||+|.++.+ +..  ||||.+....  .....+.+.+|+.+|..+.+|||||+++++|.
T Consensus         5 ~~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~-~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~   81 (309)
T d1fvra_           5 PVLDWNDIKFQDVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACE   81 (309)
T ss_dssp             SBCCGGGCEEEEEEECGGGCEEEEEEEEET-TEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEE
T ss_pred             CccCHHHcEEEEEEeeCCCcEEEEEEECCC-CeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe
Confidence            345678999999999999999999999877 764  6677765432  33456679999999999856999999999999


Q ss_pred             eCCeEeC
Q psy1646         172 TKVKCSF  178 (178)
Q Consensus       172 ~~~~~yl  178 (178)
                      +.+.+||
T Consensus        82 ~~~~~~i   88 (309)
T d1fvra_          82 HRGYLYL   88 (309)
T ss_dssp             ETTEEEE
T ss_pred             cCCeeEE
Confidence            9988775

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=4e-14  Score=108.95  Aligned_cols=72  Identities=25%  Similarity=0.280  Sum_probs=62.8

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      .++|+++++||+|+||+||+|.+..+ |+.||||++.+... .....+.+.+|+.+|+.+ .|||||+++++|..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~-~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~   88 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKT-GLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTP   88 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTT-TEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCC-CCEEEEEEECchhc-ChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEee
Confidence            36799999999999999999999999 99999999976532 344556789999999999 99999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.45  E-value=8.4e-14  Score=106.36  Aligned_cols=70  Identities=23%  Similarity=0.344  Sum_probs=61.3

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ..++|+++++||+|+||+||+|.+..+ +..||||+++..      ..+.+.+|+.+|..+..||||++++++|...
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~-~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~  102 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITN-NEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDP  102 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCC-CCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEec
Confidence            346799999999999999999999989 999999998753      2457889999999995599999999999854

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=6.3e-14  Score=107.07  Aligned_cols=85  Identities=42%  Similarity=0.740  Sum_probs=69.1

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEe---CCCCCeEEEEeeeccccc-ccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKR---GSSDEVYAVKVLKKDVII-QDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~~~~aiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      ...+.+++|++++.||+|+||.||+|.+.   .+ |..||||++++.... .....+.+.+|+.+|..+.+||||+++++
T Consensus        18 ~~~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~-g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~   96 (322)
T d1vzoa_          18 AEKVGIENFELLKVLGTGAYGKVFLVRKISGHDT-GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHY   96 (322)
T ss_dssp             CCCCCGGGEEEEEEEEETTTEEEEEEEECSSTTT-TCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEE
T ss_pred             CcccchhceEEEEEEecCCCeEEEEEEECccCCC-CcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeee
Confidence            34467899999999999999999999874   35 789999999765432 22345678999999999944489999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|.+.+.+|+
T Consensus        97 ~~~~~~~~~~  106 (322)
T d1vzoa_          97 AFQTETKLHL  106 (322)
T ss_dssp             EEEETTEEEE
T ss_pred             eeccCCceee
Confidence            9999888764

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=8.5e-14  Score=107.17  Aligned_cols=71  Identities=17%  Similarity=0.243  Sum_probs=59.7

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      ++|++++.||+|+||+||+|.+..+ ++.||||++++..  .....+.+.+|+.+|..| +|||||++++++...
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~   78 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVN-KVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAP   78 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTT-CSEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCS
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCC-CcEEEEEEEehhc--ChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeec
Confidence            4699999999999999999999989 9999999997543  344567899999999999 999999999998764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=5.1e-14  Score=105.22  Aligned_cols=77  Identities=32%  Similarity=0.394  Sum_probs=54.5

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCC--CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSD--EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~--~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +..++|++++.||+|+||.||+|.+....+  ..||||++.+.........+.+.+|+.+|..+ +|||||+++++|.+.
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~~   83 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTP   83 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeec
Confidence            345789999999999999999998764413  36899999866544455567899999999999 999999999999764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.2e-13  Score=103.08  Aligned_cols=72  Identities=25%  Similarity=0.361  Sum_probs=61.0

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      .+..++|++++.||+|+||.||+|.+. + +..||||+++...    ...+.+.+|+.+|..+ +|||||++++++...
T Consensus         9 ei~~~~~~~~~~iG~G~fg~Vy~~~~~-~-~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~   80 (272)
T d1qpca_           9 EVPRETLKLVERLGAGQFGEVWMGYYN-G-HTKVAVKSLKQGS----MSPDAFLAEANLMKQL-QHQRLVRLYAVVTQE   80 (272)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-T-TEEEEEEEECTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred             ecCHHHeEEeEEEecCCCcEEEEEEEC-C-CCEEEEEEEccCc----CCHHHHHHHHHHHHhC-CCCCEeEEEeeeccC
Confidence            356688999999999999999999976 5 6789999997542    2346799999999999 999999999987643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.1e-13  Score=105.75  Aligned_cols=80  Identities=29%  Similarity=0.402  Sum_probs=63.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCCC-----eEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSDE-----VYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +..++|+++++||+|+||.||+|.+... +.     .||+|.+....  .......+.+|+.+|..+.+|||||+++++|
T Consensus        34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~-~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          34 FPRENLEFGKVLGSGAFGKVMNATAYGI-SKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESC-SSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCHHHeEEeeEEeeCCCeEEEEEEEcCC-CcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            4557899999999999999999998765 43     68999886542  3344567999999999886899999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      .+.+.+||
T Consensus       111 ~~~~~~~l  118 (325)
T d1rjba_         111 TLSGPIYL  118 (325)
T ss_dssp             CSSSSCEE
T ss_pred             eeCCeEEE
Confidence            98887764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.5e-14  Score=104.99  Aligned_cols=74  Identities=26%  Similarity=0.466  Sum_probs=60.1

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe-C
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT-K  173 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~-~  173 (178)
                      .+..++|++++.||+|+||.||+|.+.   |..||||.++..     ...+.+.+|+.++..+ +|||||+++++|.. .
T Consensus         3 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~   73 (262)
T d1byga_           3 ALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND-----ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEK   73 (262)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET---TEEEEEEECCCC-----C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC-
T ss_pred             ccCHHHeEEeEEEecCCCeEEEEEEEC---CeEEEEEEECcH-----HHHHHHHHHHHHHHhC-CCCCEeeEEEEEEecC
Confidence            356788999999999999999999985   668999999643     2346789999999999 99999999998854 3


Q ss_pred             CeEe
Q psy1646         174 VKCS  177 (178)
Q Consensus       174 ~~~y  177 (178)
                      +.+|
T Consensus        74 ~~~~   77 (262)
T d1byga_          74 GGLY   77 (262)
T ss_dssp             -CCE
T ss_pred             CcEE
Confidence            4454

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=7.9e-14  Score=105.48  Aligned_cols=77  Identities=22%  Similarity=0.337  Sum_probs=64.4

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      ..++|++++.||+|+||.||+|.++.     + +..||||.++...  .....+.+.+|+.+|..+ +||||++++++|.
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~-~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~   86 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEP-FTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCA   86 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSS-EEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCC-CeEEEEEEEChhc--ChHHHHHHHHHHHHHHhc-CCCCcccceeeec
Confidence            35679999999999999999999874     3 4689999987542  334567899999999999 9999999999998


Q ss_pred             eCCeEe
Q psy1646         172 TKVKCS  177 (178)
Q Consensus       172 ~~~~~y  177 (178)
                      ..+.+|
T Consensus        87 ~~~~~~   92 (301)
T d1lufa_          87 VGKPMC   92 (301)
T ss_dssp             SSSSCE
T ss_pred             cCCceE
Confidence            776654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.8e-13  Score=102.80  Aligned_cols=74  Identities=22%  Similarity=0.348  Sum_probs=61.9

Q ss_pred             CCCCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          93 DRKVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        93 ~~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ...+..++|++++.||+|+||.||+|.++.+  ..||||++....    ...+.+.+|+.+|..+ +|||||+++++|.+
T Consensus        11 ~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~--~~vAiK~l~~~~----~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~   83 (285)
T d1fmka3          11 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGT--TRVAIKTLKPGT----MSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE   83 (285)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTT--EEEEEEECCTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             ceEcCHHHEEEeeEEeeCCCeEEEEEEECCC--CEEEEEEECccc----CCHHHHHHHHHHHHhc-ccCCEeEEEEEEec
Confidence            3346678999999999999999999998744  579999997542    2346799999999999 99999999999865


Q ss_pred             C
Q psy1646         173 K  173 (178)
Q Consensus       173 ~  173 (178)
                      .
T Consensus        84 ~   84 (285)
T d1fmka3          84 E   84 (285)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.2e-13  Score=101.45  Aligned_cols=77  Identities=25%  Similarity=0.368  Sum_probs=60.2

Q ss_pred             CCCCeEEEee-eccCCCeeEEEEEEeCCC-CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          97 GLEDFHFIKV-LGKGSFGKVMLAEKRGSS-DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        97 ~~~~~~~~~~-lG~G~fg~V~~~~~~~~~-~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ..++|.+.+. ||+|+||.||+|.++... +..||||+++...  .....+.+.+|+.+|..+ +|||||++++++.++.
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~~   82 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQAEA   82 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEESSS
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhC-CCCCEeeEeeeeccCe
Confidence            3456888885 999999999999876430 4479999997542  344567899999999999 9999999999987643


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                       +|
T Consensus        83 -~~   84 (285)
T d1u59a_          83 -LM   84 (285)
T ss_dssp             -EE
T ss_pred             -EE
Confidence             44

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.6e-13  Score=102.34  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=61.7

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCC--CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSS--DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK  173 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~  173 (178)
                      +..++|++++.||+|+||.||+|.+..+.  +..||||.+....  .......+.+|+.+|+.+ +|||||+++++|.. 
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~-   79 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVITE-   79 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS-
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-
Confidence            44578999999999999999999987541  2457888875432  345567899999999999 99999999999864 


Q ss_pred             CeEe
Q psy1646         174 VKCS  177 (178)
Q Consensus       174 ~~~y  177 (178)
                      +.+|
T Consensus        80 ~~~~   83 (273)
T d1mp8a_          80 NPVW   83 (273)
T ss_dssp             SSCE
T ss_pred             CeEE
Confidence            4444

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.9e-13  Score=102.76  Aligned_cols=80  Identities=26%  Similarity=0.329  Sum_probs=66.2

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCF  170 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~  170 (178)
                      +..++|+++++||+|+||.||+|.+..     + +..||||.++...  .......+.+|+.++..+.+|||||+++++|
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~-~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDA-AMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTC-EEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCC-CeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            556899999999999999999998753     3 5689999997653  3345567999999999996699999999999


Q ss_pred             EeCCeEeC
Q psy1646         171 QTKVKCSF  178 (178)
Q Consensus       171 ~~~~~~yl  178 (178)
                      .+.+.+||
T Consensus        97 ~~~~~~~l  104 (311)
T d1t46a_          97 TIGGPTLV  104 (311)
T ss_dssp             CSSSSCEE
T ss_pred             eeCCEEEE
Confidence            98776664

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=4.1e-13  Score=103.03  Aligned_cols=68  Identities=22%  Similarity=0.358  Sum_probs=57.5

Q ss_pred             CCCCCeEEEe-eeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          96 VGLEDFHFIK-VLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        96 ~~~~~~~~~~-~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      ..+++|+++. +||+|+||.||+|.+..+ ++.||||+++..        ..+.+|+.++.++.+|||||+++++|++
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~-~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~   76 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRT-QEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYEN   76 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTT-CCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCC-CCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            3467899875 699999999999999989 999999998643        3567899987665489999999999976

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.8e-13  Score=103.83  Aligned_cols=80  Identities=18%  Similarity=0.224  Sum_probs=65.7

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeC-----CCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccccee
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRG-----SSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSC  169 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~  169 (178)
                      .+..++|++++.||+|+||.||+|.+..     . +..||||.++...  .......+.+|+.++..+ +|||||+++++
T Consensus        16 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~-~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l-~h~nIv~~~~~   91 (308)
T d1p4oa_          16 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEP-ETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGV   91 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEE-EEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEE
T ss_pred             eecHHHeEEeeEEeeCCCeEEEEEEECCcccCCC-CcEEEEEEECccc--ChHHHHHHHHHHHHHHHc-CCCCEeeeeeE
Confidence            4566899999999999999999998763     2 4689999997542  334456789999999999 99999999999


Q ss_pred             EEeCCeEeC
Q psy1646         170 FQTKVKCSF  178 (178)
Q Consensus       170 ~~~~~~~yl  178 (178)
                      |...+.+||
T Consensus        92 ~~~~~~~~l  100 (308)
T d1p4oa_          92 VSQGQPTLV  100 (308)
T ss_dssp             ECSSSSCEE
T ss_pred             EecCCceeE
Confidence            987776653

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.9e-13  Score=102.22  Aligned_cols=75  Identities=19%  Similarity=0.303  Sum_probs=59.6

Q ss_pred             CCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc--CCCCccccceeEEe
Q psy1646          97 GLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA--KHPFLTALHSCFQT  172 (178)
Q Consensus        97 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--~hp~iv~l~~~~~~  172 (178)
                      ..++|++++.||+|+||.||+|.+..+.++.||||+++.... .......+.+|+.+|+.|.  .|||||+++++|..
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~   81 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV   81 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC-TTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhc-cchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecc
Confidence            346899999999999999999999655256799999976432 3344556889998887763  79999999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.9e-13  Score=104.31  Aligned_cols=65  Identities=29%  Similarity=0.352  Sum_probs=56.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQT  172 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~  172 (178)
                      -+|..+++||+|+||+||+|.+..+ ++.||||++....       ....+|+.+|+.+ +|+|||+++++|..
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~-~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~~~~~~~~   84 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDK-------RFKNRELQIMRKL-DHCNIVRLRYFFYS   84 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTT-CCEEEEEEEECCS-------SSCCHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCC-CCEEEEEEECccc-------hHHHHHHHHHHhc-CCCCCCcEEEEEEe
Confidence            4699999999999999999999999 9999999997542       1234799999999 99999999999854

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=5.6e-13  Score=100.62  Aligned_cols=80  Identities=29%  Similarity=0.408  Sum_probs=60.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCCC-------CeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccce
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSSD-------EVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHS  168 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~-------~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~  168 (178)
                      +..++|++++.||+|+||.||+|.+..+ +       ..||||.+++..  .......+.+|...+..+.+|||||++++
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~-~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~   86 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGL-DKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG   86 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC-----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCC-CcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccc
Confidence            4568899999999999999999998755 3       379999997653  34456789999999988867999999999


Q ss_pred             eEEeCCeEeC
Q psy1646         169 CFQTKVKCSF  178 (178)
Q Consensus       169 ~~~~~~~~yl  178 (178)
                      +|.+.+.+|+
T Consensus        87 ~~~~~~~~~~   96 (299)
T d1fgka_          87 ACTQDGPLYV   96 (299)
T ss_dssp             EECSSSSCEE
T ss_pred             ccccCCeEEE
Confidence            9998876663

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.1e-13  Score=101.05  Aligned_cols=76  Identities=17%  Similarity=0.185  Sum_probs=61.4

Q ss_pred             CCCCCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646          95 KVGLEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        95 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++..++|++++.||+|+||.||+|.+.    ..||||+++.... .....+.+.+|+.+|..+ +|||||++++++.. +
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~----~~vAvK~~~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~~-~   76 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYSTA-P   76 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESS----SEEEEEECCCSSC-CTTHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-S
T ss_pred             ccccccEEEEEEEeeCCCcEEEEEEEC----CEEEEEEEEcccC-CHHHHHHHHHHHHHHHhC-CCCCEeeeeEEEec-c
Confidence            356678999999999999999999743    3599999976543 345567899999999999 99999999987654 3


Q ss_pred             eEe
Q psy1646         175 KCS  177 (178)
Q Consensus       175 ~~y  177 (178)
                      .+|
T Consensus        77 ~~~   79 (276)
T d1uwha_          77 QLA   79 (276)
T ss_dssp             SCE
T ss_pred             EEE
Confidence            444

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.1e-12  Score=98.06  Aligned_cols=68  Identities=22%  Similarity=0.324  Sum_probs=53.2

Q ss_pred             eeeccCCCeeEEEEEEeCC-CCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCC
Q psy1646         105 KVLGKGSFGKVMLAEKRGS-SDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus       105 ~~lG~G~fg~V~~~~~~~~-~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++||+|+||.||+|.++.. .++.||||+++.... .....+.+.+|+.+|..+ +|||||+++++|..+.
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~~~   81 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEAES   81 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEESSS
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhC-CCCCCceEEEEeccCC
Confidence            5799999999999987643 046899999975432 344567899999999999 9999999999987654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=4e-12  Score=96.43  Aligned_cols=73  Identities=26%  Similarity=0.264  Sum_probs=57.1

Q ss_pred             EEEeeeccCCCeeEEEEEEeCCC--CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeC-CeEe
Q psy1646         102 HFIKVLGKGSFGKVMLAEKRGSS--DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTK-VKCS  177 (178)
Q Consensus       102 ~~~~~lG~G~fg~V~~~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~-~~~y  177 (178)
                      .+.++||+|+||+||+|.+..+.  ...||||.++...  .....+.+.+|+.+|.++ +|||||++++++... +.+|
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~  105 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPL  105 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceE
Confidence            34678999999999999986541  2368999987432  455567899999999999 999999999998764 4554

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.28  E-value=6.7e-12  Score=94.32  Aligned_cols=74  Identities=18%  Similarity=0.165  Sum_probs=63.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEeC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCSF  178 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~yl  178 (178)
                      ++|+++++||+|+||.||+|.+..+ ++.||||++....     ....+.+|+.++..+..|+|++.+++++......|+
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~-~~~vAvK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~   78 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLN-NQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   78 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTT-TEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCC-CCEEEEEEEcccc-----CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEE
Confidence            5799999999999999999999988 9999999986542     235678899999999555899999999988877664

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.24  E-value=1.3e-11  Score=92.76  Aligned_cols=72  Identities=17%  Similarity=0.187  Sum_probs=57.1

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCcccc-ceeEEeCCeEe
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTAL-HSCFQTKVKCS  177 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l-~~~~~~~~~~y  177 (178)
                      ++|++++.||+|+||.||+|.+..+ ++.||||++....     ....+.+|+.++..+ .|+++|.+ +.++...+.+|
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~-~~~vAvK~~~~~~-----~~~~~~~E~~i~~~l-~~~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAA-GEEVAIKLECVKT-----KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTT-TEEEEEEEEESCT-----TSCCHHHHHHHHHHS-TTSTTCCCEEEEEEETTEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCC-CCEEEEEEEchhc-----cCHHHHHHHHHHHHc-cCCCcccEEEEEEecCCEEE
Confidence            4699999999999999999999988 9999999987542     234688999999999 77765554 45555555554

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=4.2e-11  Score=90.02  Aligned_cols=77  Identities=26%  Similarity=0.339  Sum_probs=58.6

Q ss_pred             CCCCCeEEEeeeccCCCeeEEEEEEeCCC----CCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEE
Q psy1646          96 VGLEDFHFIKVLGKGSFGKVMLAEKRGSS----DEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQ  171 (178)
Q Consensus        96 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~----~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~  171 (178)
                      +..++|+++++||+|+||.||+|.+....    ++.||||.++...  .......+.+|+.++..+.+|+|||.+++++.
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~   87 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT   87 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec
Confidence            44578999999999999999999986430    3579999987543  33445678899998888867899999998876


Q ss_pred             eCC
Q psy1646         172 TKV  174 (178)
Q Consensus       172 ~~~  174 (178)
                      ..+
T Consensus        88 ~~~   90 (299)
T d1ywna1          88 KPG   90 (299)
T ss_dssp             STT
T ss_pred             cCC
Confidence            543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.2e-11  Score=91.93  Aligned_cols=66  Identities=20%  Similarity=0.268  Sum_probs=51.8

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHH--HHhcCCCCccccceeEEeCC
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRIL--ALAAKHPFLTALHSCFQTKV  174 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il--~~l~~hp~iv~l~~~~~~~~  174 (178)
                      ++|.+.+.||+|+||.||+|.+  + |..||||.+....      ...+.+|.+++  ..+ +|||||++++++.+.+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~-g~~vAvK~~~~~~------~~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~   70 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--R-GEEVAVKIFSSRE------ERSWFREAEIYQTVML-RHENILGFIAADNKDN   70 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--T-TEEEEEEEECGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--C-CEEEEEEEECccc------hhHHHHHHHHHHHhhC-CCCcCcceEEEEEeCC
Confidence            4689999999999999999986  4 7899999986432      23445555544  467 8999999999988654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.13  E-value=2.7e-11  Score=93.13  Aligned_cols=69  Identities=20%  Similarity=0.307  Sum_probs=57.2

Q ss_pred             CCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhc----------CCCCccccce
Q psy1646          99 EDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAA----------KHPFLTALHS  168 (178)
Q Consensus        99 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~----------~hp~iv~l~~  168 (178)
                      ++|+++++||+|+||+||+|.+..+ |+.||||++++..    ...+.+.+|+.+++.+.          .|+|||++++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~-g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~   87 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVN-NTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   87 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTT-TEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCC-CCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEE
Confidence            4599999999999999999999999 9999999998642    33467788998888772          3578999998


Q ss_pred             eEEe
Q psy1646         169 CFQT  172 (178)
Q Consensus       169 ~~~~  172 (178)
                      ++..
T Consensus        88 ~~~~   91 (362)
T d1q8ya_          88 HFNH   91 (362)
T ss_dssp             EEEE
T ss_pred             Eeee
Confidence            8764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.42  E-value=4.2e-07  Score=63.25  Aligned_cols=66  Identities=15%  Similarity=0.015  Sum_probs=47.0

Q ss_pred             eEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeeccccc----c-----------cchhhhHHHHHHHHHHhcCCCCccc
Q psy1646         101 FHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVII----Q-----------DDDVDCTMTEKRILALAAKHPFLTA  165 (178)
Q Consensus       101 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~----~-----------~~~~~~~~~Ei~il~~l~~hp~iv~  165 (178)
                      +.+++.||+|+||.||+|.+. + |..||||+++.....    .           ........+|...+..+ .|.+++.
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~-g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~   78 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-K-FGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPK   78 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-T-TEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCC
T ss_pred             chhCCEeeeCcceEEEEEECC-C-CCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcce
Confidence            467899999999999999875 6 889999987642210    0           01122345688888899 9999887


Q ss_pred             ccee
Q psy1646         166 LHSC  169 (178)
Q Consensus       166 l~~~  169 (178)
                      .+++
T Consensus        79 ~~~~   82 (191)
T d1zara2          79 VYAW   82 (191)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            7654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.99  E-value=1.9  Score=29.30  Aligned_cols=74  Identities=14%  Similarity=0.037  Sum_probs=47.0

Q ss_pred             CCCeEEEeeeccCCCeeEEEEEEeCCCCCeEEEEeeecccccccchhhhHHHHHHHHHHhcCCCCccccceeEEeCCeEe
Q psy1646          98 LEDFHFIKVLGKGSFGKVMLAEKRGSSDEVYAVKVLKKDVIIQDDDVDCTMTEKRILALAAKHPFLTALHSCFQTKVKCS  177 (178)
Q Consensus        98 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~Ei~il~~l~~hp~iv~l~~~~~~~~~~y  177 (178)
                      ++.|.+++..+-++.+.||+..  .. +..+.+|.....   .......+.+|..++..+..+--+.+++.++...+..|
T Consensus        13 ~~~~~~~~~~~G~s~~~v~rv~--~~-~~~~vlk~~~~~---~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          13 IEKYRCVKDTEGMSPAKVYKLV--GE-NENLYLKMTDSR---YKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HTTSEEEECSCCCSSSEEEEEE--CS-SCEEEEEEECGG---GTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             hhceEEEEcCCCCCCCcEEEEE--eC-CCeEEEEEcCCC---cccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            3457777665545557899765  34 667888877543   22334567899999888844434556666666665544